S1 E1 S2 E2 Reference Contig IDY Ambiguous Best_group 2723757 2731442 7644 1 NC_007795.1 0 99.43 True CONTIG 0 7644 correct 2363834 2378372 1 14539 NC_007795.1 1 99.98 True CONTIG 1 14539 correct 470526 492152 1 21627 NC_007795.1 3 99.97 True CONTIG 3 21627 correct 1864932 1890299 25368 1 NC_007795.1 65 99.97 True CONTIG 65 25368 correct 2743081 2756161 1 13081 NC_007795.1 152 99.98 True CONTIG 152 13082 correct 2778902 2793234 1 14332 NC_007795.1 156 99.98 True CONTIG 156 14332 correct 1978473 1987698 9226 1 NC_007795.1 158 99.99 True CONTIG 158 9226 correct 2613601 2622929 1 9329 NC_007795.1 166 99.98 True CONTIG 166 9329 correct 811885 815672 5189 1402 NC_007795.1 170 100.0 True CONTIG 170 5189 correct CONTIG 187 286 unaligned 1180536 1186112 1 5576 NC_007795.1 332 99.96 True CONTIG 332 5576 correct 1760851 1771753 1 10903 NC_007795.1 366 99.98 True CONTIG 366 10903 correct 1844221 1844420 200 1 NC_007795.1 408 100.0 True CONTIG 408 200 correct CONTIG 461 334 unaligned 1671407 1705682 34276 1 NC_007795.1 471 99.98 True CONTIG 471 34276 correct 2451981 2472611 20631 1 NC_007795.1 578 99.98 True CONTIG 578 20631 correct CONTIG 589 658 unaligned CONTIG 594 1275 unaligned CONTIG 618 355 unaligned 554155 554363 209 1 NC_007795.1 632 100.0 True CONTIG 632 209 correct 2647816 2650249 1 2434 NC_007795.1 714 100.0 True CONTIG 714 2434 correct 1748886 1760329 11406 1 NC_007795.1 730 99.62 True CONTIG 730 11406 correct 1717963 1724132 1 6170 NC_007795.1 741 99.98 True CONTIG 741 6170 correct CONTIG 780 1076 unaligned 1461975 1462182 1 208 NC_007795.1 822 100.0 True CONTIG 822 208 correct 1286832 1310414 23583 1 NC_007795.1 869 99.98 True CONTIG 869 23583 correct CONTIG 873 371 unaligned 2254983 2256244 1262 1 NC_007795.1 887 100.0 True CONTIG 887 1262 correct 1771735 1776399 1 4665 NC_007795.1 916 100.0 True CONTIG 916 4665 correct 978231 979517 1 1287 NC_007795.1 936 99.92 True CONTIG 936 1287 correct 2244436 2254981 10544 1 NC_007795.1 982 99.93 True CONTIG 982 10544 correct 58620 58975 356 1 NC_007795.1 1068 100.0 True CONTIG 1068 356 correct 844496 860441 1 15946 NC_007795.1 1079 99.97 True CONTIG 1079 15946 correct 1111512 1122663 11151 1 NC_007795.1 1123 99.98 True CONTIG 1123 11151 correct 1074848 1078540 3693 1 NC_007795.1 1182 100.0 True CONTIG 1182 3693 correct CONTIG 1219 239 unaligned 498610 500776 1 2167 NC_007795.1 1411 100.0 True CONTIG 1411 2167 correct CONTIG 1506 6859 unaligned 2201800 2212043 10300 1 NC_007795.1 1576 99.39 True CONTIG 1576 10300 correct 500773 516185 15413 1 NC_007795.1 1614 99.97 True CONTIG 1614 15413 correct 2756171 2778744 1 22573 NC_007795.1 1626 99.97 True CONTIG 1626 22573 correct 56424 56743 1 320 NC_007795.1 1654 100.0 True CONTIG 1654 320 correct 2378884 2399103 1 20221 NC_007795.1 1694 99.97 True local misassembly 2399404 2425223 20222 46042 NC_007795.1 1694 99.98 True CONTIG 1694 46042 correct 19253 24186 4928 1 NC_007795.1 1716 99.82 True CONTIG 1716 4928 correct 2793231 2802486 1 9256 NC_007795.1 1779 99.99 True CONTIG 1779 9256 correct 1503547 1506424 129 3005 NC_007795.1 1792 99.51 True CONTIG 1792 3923 correct CONTIG 1909 349 unaligned 2426013 2434234 1 8222 NC_007795.1 2001 99.99 True CONTIG 2001 8222 correct 603990 613170 1 9181 NC_007795.1 2006 100.0 True relocation, inconsistency = -13357 613168 618327 22536 27695 NC_007795.1 2006 99.98 True CONTIG 2006 27695 misassembled 1349807 1360243 1 10437 NC_007795.1 2044 99.99 True CONTIG 2044 10437 correct 1707629 1717950 1 10322 NC_007795.1 2046 99.98 True CONTIG 2046 10322 correct 2731413 2743067 1 11655 NC_007795.1 2118 99.96 True CONTIG 2118 11655 correct 768626 775666 1 7041 NC_007795.1 2131 99.94 True CONTIG 2131 7041 correct 880091 892049 11959 1 NC_007795.1 2148 99.95 True CONTIG 2148 11959 correct CONTIG 2237 2296 unaligned 516169 534724 1 18556 NC_007795.1 2279 99.98 True CONTIG 2279 18556 correct 57320 57528 1 209 NC_007795.1 2282 100.0 True CONTIG 2282 209 correct 1423814 1431697 7884 1 NC_007795.1 2336 99.97 True CONTIG 2336 7884 correct 1842477 1842676 1 200 NC_007795.1 2386 100.0 True CONTIG 2386 200 correct CONTIG 2401 2015 unaligned 860634 880106 19473 1 NC_007795.1 2435 99.98 True CONTIG 2435 19473 correct CONTIG 2438 5009 unaligned 1613908 1619848 1 5941 NC_007795.1 2491 99.98 True CONTIG 2491 5941 correct 795416 811550 1 16136 NC_007795.1 2534 99.95 True CONTIG 2534 16136 correct CONTIG 2613 3147 unaligned 2688183 2723247 1 35065 NC_007795.1 2627 99.99 True CONTIG 2627 35065 correct 1906559 1910148 1 3591 NC_007795.1 2644 99.94 True CONTIG 2644 3591 correct 2194539 2201216 6678 1 NC_007795.1 2678 100.0 True CONTIG 2678 6678 correct 1643170 1643497 328 1 NC_007795.1 2680 100.0 True CONTIG 2680 328 correct CONTIG 2731 625 unaligned 463308 470544 7237 1 NC_007795.1 2768 99.97 True CONTIG 2768 7237 correct 2472610 2481668 1 9056 NC_007795.1 2776 99.94 True CONTIG 2776 9056 correct 293697 293841 180 36 NC_007795.1 2791 98.62 True CONTIG 2791 255 correct 1461300 1461646 1 346 NC_007795.1 2803 99.71 True CONTIG 2803 346 correct 1333172 1348923 15752 1 NC_007795.1 3011 99.99 True CONTIG 3011 15752 correct 789469 794896 1 5428 NC_007795.1 3033 99.94 True CONTIG 3033 5428 correct 34152 36568 10853 13271 NC_007795.1 3099 99.92 True CONTIG 3099 13271 correct_unaligned 775713 789483 13771 1 NC_007795.1 3100 99.99 True CONTIG 3100 13771 correct 291611 291694 328 245 NC_007795.1 3121 97.62 True CONTIG 3121 328 correct CONTIG 3123 242 unaligned CONTIG 3229 3279 unaligned 979546 994092 14547 1 NC_007795.1 3299 99.99 True CONTIG 3299 14547 correct 58154 58638 485 1 NC_007795.1 3309 100.0 True CONTIG 3309 485 correct 635691 668158 1 32467 NC_007795.1 3327 99.98 True CONTIG 3327 32467 correct 1122669 1159511 36843 1 NC_007795.1 3359 99.97 True CONTIG 3359 36843 correct 1043547 1055043 11497 1 NC_007795.1 3366 99.97 True CONTIG 3366 11497 correct 630319 635686 1 5368 NC_007795.1 3392 99.96 True CONTIG 3392 5368 correct 1843341 1844008 668 1 NC_007795.1 3398 100.0 True CONTIG 3398 668 correct 553498 553840 1 343 NC_007795.1 3546 100.0 True CONTIG 3546 343 correct CONTIG 3551 335 unaligned 724029 730497 1 6469 NC_007795.1 3632 99.98 True CONTIG 3632 6469 correct 31126 34154 1 3029 NC_007795.1 3641 100.0 True CONTIG 3641 4700 correct 721192 723950 2759 1 NC_007795.1 3708 99.93 True CONTIG 3708 2759 correct 291635 292066 432 1 NC_007795.1 3769 100.0 True CONTIG 3769 432 correct CONTIG 3771 345 unaligned 24297 31137 6841 1 NC_007795.1 3793 99.97 True CONTIG 3793 6841 correct CONTIG 3812 205 unaligned 1612431 1613927 1497 1 NC_007795.1 3820 100.0 True CONTIG 3820 1497 correct 1890395 1897238 1 6844 NC_007795.1 3836 100.0 True CONTIG 3836 6844 correct CONTIG 3866 211 unaligned CONTIG 3909 349 unaligned 897880 916953 1 19073 NC_007795.1 3957 99.96 True CONTIG 3957 19073 correct 917002 938742 1 21741 NC_007795.1 3960 99.98 True CONTIG 3960 21741 correct CONTIG 3988 702 unaligned 892049 897892 5844 1 NC_007795.1 4018 99.98 True CONTIG 4018 5844 correct CONTIG 4039 252 unaligned 290869 291574 1 706 NC_007795.1 4053 100.0 True CONTIG 4053 706 correct 2557591 2560279 2689 1 NC_007795.1 4063 99.93 True CONTIG 4063 2689 correct 56151 56353 1 203 NC_007795.1 4195 100.0 True CONTIG 4195 203 correct CONTIG 4251 1151 unaligned 336924 341751 4827 1 NC_007795.1 4279 99.92 True CONTIG 4279 4827 correct 994129 1004008 9880 1 NC_007795.1 4416 99.98 True CONTIG 4416 9880 correct 1159492 1180534 1 21043 NC_007795.1 4426 99.99 True CONTIG 4426 21043 correct 290007 290246 240 1 NC_007795.1 4429 97.08 True CONTIG 4429 240 correct 258658 264206 1 5549 NC_007795.1 4430 99.95 True CONTIG 4430 5549 correct 551000 553471 1 2472 NC_007795.1 4432 100.0 True CONTIG 4432 2472 correct 290122 290246 122 246 NC_007795.1 4601 96.8 True CONTIG 4601 246 correct 57807 58042 1 236 NC_007795.1 4619 100.0 True CONTIG 4619 236 correct 2266035 2293701 1 27666 NC_007795.1 4622 99.98 True CONTIG 4622 27666 correct 843945 844493 549 1 NC_007795.1 4664 100.0 True CONTIG 4664 549 correct CONTIG 4849 772 unaligned 2571294 2571514 221 1 NC_007795.1 4904 100.0 True CONTIG 4904 221 correct 2492256 2498360 6105 1 NC_007795.1 4906 100.0 True CONTIG 4906 6105 correct 2650250 2688171 37922 1 NC_007795.1 4925 99.96 True CONTIG 4925 37922 correct 550711 551029 319 1 NC_007795.1 4933 100.0 True CONTIG 4933 319 correct CONTIG 5036 880 unaligned 1900651 1901002 366 1 NC_007795.1 5107 96.17 True CONTIG 5107 366 correct 1844017 1844244 1 228 NC_007795.1 5167 100.0 True CONTIG 5167 228 correct 2644102 2647685 3584 1 NC_007795.1 5196 99.97 True CONTIG 5196 3584 correct 2602915 2613375 10461 1 NC_007795.1 5222 99.96 True CONTIG 5222 10461 correct 1844894 1845131 1 238 NC_007795.1 5311 100.0 True CONTIG 5311 238 correct 1619835 1643173 23339 1 NC_007795.1 5338 99.97 True CONTIG 5338 23339 correct 1310392 1332599 1 22214 NC_007795.1 5358 99.93 True CONTIG 5358 22214 correct 2335888 2363829 1 27931 NC_007795.1 5386 99.92 True CONTIG 5386 27931 correct 1724121 1748913 24793 1 NC_007795.1 5433 99.98 True CONTIG 5433 24793 correct 1004190 1043574 39384 1 NC_007795.1 5434 99.98 True CONTIG 5434 39384 correct 553820 554086 267 1 NC_007795.1 5488 100.0 True CONTIG 5488 267 correct CONTIG 5489 271 unaligned 1842647 1843132 486 1 NC_007795.1 5617 100.0 True CONTIG 5617 486 correct 290217 290617 401 1 NC_007795.1 5618 99.5 True CONTIG 5618 401 correct CONTIG 5648 3112 unaligned 2534736 2552825 1 18090 NC_007795.1 5654 99.96 True fake: scaffold gap size wrong estimation (local) 2552994 2553256 18259 18521 NC_007795.1 5654 100.0 True CONTIG 5654 18521 correct 2534736 2552825 1 18090 NC_007795.1 5655 99.96 True fake: scaffold gap size wrong estimation (local) 2553338 2554022 18603 19287 NC_007795.1 5655 100.0 True fake: scaffold gap size wrong estimation (local) 2557169 2557408 22434 22673 NC_007795.1 5655 100.0 True CONTIG 5655 22673 correct 1186108 1286624 1 100517 NC_007795.1 5656 99.98 True CONTIG 5656 100517 correct 1801553 1813656 12103 1 NC_007795.1 5657 99.93 True CONTIG 5657 12103 correct 534695 549562 1 14869 NC_007795.1 5658 99.98 True CONTIG 5658 14869 correct 243105 247943 4839 1 NC_007795.1 5660 100.0 True fake: scaffold gap size wrong estimation (local) 117673 242800 130192 5144 NC_007795.1 5660 99.9 True CONTIG 5660 130192 correct 2581575 2602908 1 21292 NC_007795.1 5661 99.65 True CONTIG 5661 21292 correct 624189 630291 6094 1 NC_007795.1 5662 99.84 True local misassembly 618329 623789 11555 6095 NC_007795.1 5662 100.0 True CONTIG 5662 11555 correct 815656 843942 28287 1 NC_007795.1 5663 99.98 True relocation, scaffold gap is present, inconsistency = 640676 1488006 1493483 31675 37155 NC_007795.1 5663 96.9 True local misassembly 1493517 1493919 37425 37827 NC_007795.1 5663 97.77 True fake: scaffold gap size wrong estimation (local) 1496394 1501853 39507 44965 NC_007795.1 5663 96.81 True relocation, inconsistency = 457837 1960276 1960775 45551 46053 NC_007795.1 5663 96.02 True CONTIG 5663 46053 misassembled 1431718 1459865 1 28148 NC_007795.1 5664 99.91 True fake: scaffold gap size wrong estimation (local) 1460068 1460838 28351 29121 NC_007795.1 5664 100.0 True CONTIG 5664 29121 correct CONTIG 5665 5593 unaligned 58978 73983 1 14924 NC_007795.1 5666 99.12 True local misassembly 74172 91158 14925 31911 NC_007795.1 5666 99.85 True CONTIG 5666 31911 correct 36539 55541 19001 1 NC_007795.1 5667 99.87 True CONTIG 5667 19001 correct 1910168 1923407 1 13240 NC_007795.1 5668 99.97 True relocation, inconsistency = 43615 1967023 1978308 13241 24526 NC_007795.1 5668 99.98 True CONTIG 5668 24526 misassembled 401421 405624 5004 802 NC_007795.1 5669 99.93 True CONTIG 5669 5004 correct CONTIG 5670 15761 unaligned 385686 390706 1 5021 NC_007795.1 5671 99.96 True fake: scaffold gap size wrong estimation (local) 391122 391265 5437 5580 NC_007795.1 5671 100.0 True CONTIG 5671 5610 correct 973668 978121 4453 1 NC_007795.1 5672 99.91 True CONTIG 5672 4453 correct 1832839 1840526 1 7688 NC_007795.1 5673 99.95 True CONTIG 5673 7688 correct 1832839 1840015 1 7177 NC_007795.1 5674 99.97 True fake: scaffold gap size wrong estimation (local) 1840503 1842488 7665 9650 NC_007795.1 5674 97.33 True CONTIG 5674 9650 correct 1832839 1840015 1 7177 NC_007795.1 5675 99.97 True fake: scaffold gap size wrong estimation (local) 1843134 1843358 10296 10520 NC_007795.1 5675 100.0 True CONTIG 5675 10520 correct 454349 463300 8952 1 NC_007795.1 5676 99.96 True CONTIG 5676 8952 correct 2560272 2560466 1 194 NC_007795.1 5677 99.49 True fake: scaffold gap size wrong estimation (local) 2560637 2570875 365 10603 NC_007795.1 5677 99.93 True CONTIG 5677 10603 correct 2560437 2570875 1 10439 NC_007795.1 5678 99.92 True CONTIG 5678 10439 correct 1360214 1363072 1 2859 NC_007795.1 5679 99.97 True relocation, inconsistency = 457665 1820741 1821480 3599 2860 NC_007795.1 5679 99.87 True relocation, inconsistency = 445565 1363070 1375175 3600 15705 NC_007795.1 5679 99.97 True CONTIG 5679 15705 misassembled 2534736 2553023 18288 1 NC_007795.1 5680 99.96 True CONTIG 5680 18288 correct 2059079 2059450 8316 8687 NC_007795.1 5681 97.85 True unknown 2061920 2062169 11406 11655 NC_007795.1 5681 98.4 True unknown CONTIG 5681 18377 mis_unaligned 2059079 2059450 8316 8687 NC_007795.1 5682 97.85 True unknown 2061920 2062169 11223 11472 NC_007795.1 5682 98.4 True unknown CONTIG 5682 18194 mis_unaligned 2059079 2059450 8316 8687 NC_007795.1 5683 97.85 True unknown 2061920 2062169 11223 11472 NC_007795.1 5683 98.4 True unknown CONTIG 5683 18194 mis_unaligned CONTIG 5684 7826 unaligned 1858825 1864526 5701 1 NC_007795.1 5685 99.88 True local misassembly 1846126 1857943 17520 5702 NC_007795.1 5685 99.74 True CONTIG 5685 17520 correct 2128012 2128229 218 1 NC_007795.1 5686 100.0 True fake: scaffold gap size wrong estimation (local) 2122749 2125863 5318 2204 NC_007795.1 5686 99.97 True CONTIG 5686 5318 correct 1776626 1795447 1 18805 NC_007795.1 5687 99.88 True CONTIG 5687 18805 correct 264696 289514 1 24819 NC_007795.1 5688 99.98 True fake: scaffold gap size wrong estimation (local) 289750 289872 25055 25177 NC_007795.1 5688 99.19 True CONTIG 5688 25177 correct 498362 498607 246 1 NC_007795.1 5689 100.0 True fake: scaffold gap size wrong estimation (local) 494809 494952 3799 3656 NC_007795.1 5689 100.0 True CONTIG 5689 3799 correct CONTIG 5690 8303 unaligned CONTIG 5691 9443 unaligned CONTIG 5692 14060 unaligned CONTIG 5693 16265 unaligned 2212014 2238789 1 26776 NC_007795.1 5694 99.96 True CONTIG 5694 26986 correct 407030 417588 1 10559 NC_007795.1 5695 99.96 True CONTIG 5695 10559 correct 242766 243134 369 1 NC_007795.1 5696 100.0 True fake: scaffold gap size wrong estimation (local) 117673 241165 125383 1970 NC_007795.1 5696 99.9 True CONTIG 5696 125383 correct 1846126 1857881 1 11756 NC_007795.1 5697 100.0 True CONTIG 5697 11756 correct 1846126 1857741 1 11616 NC_007795.1 5698 100.0 True fake: scaffold gap size wrong estimation (local) 1857852 1863223 11727 17097 NC_007795.1 5698 99.89 True CONTIG 5698 17097 correct 1593870 1612460 18591 1 NC_007795.1 5699 99.97 True CONTIG 5699 18591 correct 2157748 2194510 36752 1 NC_007795.1 5700 99.92 True local misassembly 2128238 2157647 66173 36753 NC_007795.1 5700 99.94 True CONTIG 5700 66173 correct 91580 117673 26039 1 NC_007795.1 5701 99.68 True CONTIG 5701 26039 correct 2293672 2335737 1 42076 NC_007795.1 5702 99.96 True CONTIG 5702 42076 correct 2434213 2451800 17606 1 NC_007795.1 5703 99.91 True CONTIG 5703 17606 correct 1 19240 19241 2 NC_007795.1 5704 99.97 True fake: not a misassembly [linear representation of circular genome] 2802497 2821361 38105 19242 NC_007795.1 5704 99.95 True CONTIG 5704 38105 correct 2553338 2557198 3861 1 NC_007795.1 5705 100.0 True fake: scaffold gap size wrong estimation (local) 2534736 2552896 22463 4303 NC_007795.1 5705 99.96 True CONTIG 5705 22463 correct 385686 391151 5466 1 NC_007795.1 5706 99.96 True CONTIG 5706 5466 correct 815656 843942 12540 40826 NC_007795.1 5707 99.98 True CONTIG 5707 40826 correct 1055057 1074452 1 19395 NC_007795.1 5708 99.97 True fake: scaffold gap size wrong estimation (local) 1074702 1074858 19648 19804 NC_007795.1 5708 100.0 True CONTIG 5708 19804 correct 1506385 1593874 1247 88736 NC_007795.1 5709 99.9 True CONTIG 5709 88737 correct 42669 55890 13220 1 NC_007795.1 5710 99.84 True CONTIG 5710 13220 correct 2073495 2122655 49081 1 NC_007795.1 5712 99.79 True CONTIG 5712 49081 correct 248083 258593 10511 1 NC_007795.1 5713 99.82 True fake: scaffold gap size wrong estimation (local) 243105 246488 15495 12112 NC_007795.1 5713 100.0 True CONTIG 5713 15495 correct 248422 258593 10172 1 NC_007795.1 5714 99.81 True fake: scaffold gap size wrong estimation (local) 247909 248117 10685 10477 NC_007795.1 5714 100.0 True fake: scaffold gap size wrong estimation (local) 243105 246488 15495 12112 NC_007795.1 5714 100.0 True CONTIG 5714 15495 correct 407444 417588 10145 1 NC_007795.1 5715 99.96 True fake: scaffold gap size wrong estimation (local) 406796 407059 10793 10530 NC_007795.1 5715 100.0 True CONTIG 5715 10793 correct 1845135 1857741 12607 1 NC_007795.1 5716 100.0 True CONTIG 5716 12607 correct 1960276 1960775 503 1 NC_007795.1 5717 96.02 True relocation, inconsistency = 457837 1496394 1501853 6547 1089 NC_007795.1 5717 96.81 True relocation, inconsistency = -564277 2059838 2060421 7380 6797 NC_007795.1 5717 95.72 True relocation, scaffold gap is present, inconsistency = 564889 1493517 1493919 8812 8410 NC_007795.1 5717 97.77 True local misassembly 1488006 1493483 14562 9082 NC_007795.1 5717 96.9 True relocation, scaffold gap is present, inconsistency = 640647 815656 843942 17979 46265 NC_007795.1 5717 99.98 True CONTIG 5717 46265 misassembled 391968 392448 1 481 NC_007795.1 5719 100.0 True fake: scaffold gap size wrong estimation (local) 395090 400951 3124 8986 NC_007795.1 5719 99.81 True CONTIG 5719 8986 correct 2018617 2043611 31079 6078 NC_007795.1 5720 99.7 True CONTIG 5720 31079 correct 495008 498122 3115 1 NC_007795.1 5721 99.9 True fake: scaffold gap size wrong estimation (extensive) 495008 498128 8373 5253 NC_007795.1 5721 99.9 True fake: scaffold gap size wrong estimation (local) 493052 494695 10313 8670 NC_007795.1 5721 100.0 True CONTIG 5721 10313 correct 495008 498122 3115 1 NC_007795.1 5722 99.9 True fake: scaffold gap size wrong estimation (local) 492898 493040 5243 5101 NC_007795.1 5722 100.0 True CONTIG 5722 5243 correct 668198 721052 1 52907 NC_007795.1 5723 99.96 True CONTIG 5723 52907 correct 730723 746494 1 15772 NC_007795.1 5724 99.98 True local misassembly 746490 757478 16251 27239 NC_007795.1 5724 100.0 True relocation, inconsistency = 1199 758678 768113 27240 36732 NC_007795.1 5724 99.67 True CONTIG 5724 36732 misassembled 549575 549814 240 1 NC_007795.1 5726 100.0 True fake: scaffold gap size wrong estimation (local) 534695 549277 15121 538 NC_007795.1 5726 99.98 True CONTIG 5726 15121 correct 1511017 1593874 82860 2 NC_007795.1 5727 99.97 True CONTIG 5727 82860 correct 1464425 1488102 23690 13 NC_007795.1 5728 97.84 True CONTIG 5728 25626 correct 1464425 1488102 23690 13 NC_007795.1 5729 97.84 True fake: scaffold gap size wrong estimation (local) 1462275 1462574 26537 26238 NC_007795.1 5729 100.0 True CONTIG 5729 26537 correct 1464425 1488102 23690 13 NC_007795.1 5730 97.84 True relocation, scaffold gap is present, inconsistency = -49894 1506385 1510949 31623 27060 NC_007795.1 5730 98.71 True local misassembly 1502423 1502828 34772 34367 NC_007795.1 5730 96.06 True relocation, inconsistency = -458400 1960276 1960789 35322 34806 NC_007795.1 5730 95.94 True relocation, inconsistency = 457837 1496394 1501853 41366 35908 NC_007795.1 5730 96.81 True CONTIG 5730 41372 misassembled 2622900 2644090 21190 1 NC_007795.1 5731 99.98 True CONTIG 5731 21190 correct 2481679 2492285 10606 1 NC_007795.1 5732 99.96 True CONTIG 5732 10606 correct 1078611 1111069 1 32424 NC_007795.1 5733 99.87 True CONTIG 5733 32424 correct 758678 762707 4030 1 NC_007795.1 5734 99.98 True relocation, inconsistency = 1199 746490 757478 15019 4031 NC_007795.1 5734 100.0 True local misassembly 730602 746494 31390 15498 NC_007795.1 5734 99.98 True CONTIG 5734 31393 misassembled 2573405 2581604 1 8157 NC_007795.1 5735 99.1 True fake: scaffold gap size wrong estimation (local) 2581759 2602908 8270 29419 NC_007795.1 5735 99.84 True CONTIG 5735 29419 correct 2498331 2527484 29215 1 NC_007795.1 5736 99.98 True CONTIG 5736 29215 correct 1375410 1378060 1 2651 NC_007795.1 5737 99.23 True local misassembly 1378292 1381574 2652 5934 NC_007795.1 5737 99.27 True local misassembly 1381953 1384910 5935 8892 NC_007795.1 5737 99.97 True local misassembly 1384897 1386881 8972 10956 NC_007795.1 5737 100.0 True relocation, inconsistency = -3174 1386868 1423827 14117 51076 NC_007795.1 5737 99.97 True CONTIG 5737 51076 misassembled 395001 400951 1 5952 NC_007795.1 5738 99.82 True CONTIG 5738 5952 correct 1832534 1832847 314 1 NC_007795.1 5739 100.0 True fake: scaffold gap size wrong estimation (local) 1820743 1832382 12105 466 NC_007795.1 5739 99.97 True CONTIG 5739 12105 correct 2527742 2552825 1 25084 NC_007795.1 5740 99.97 True CONTIG 5740 25084 correct CONTIG 5741 6609 unaligned 1796347 1801553 5207 1 NC_007795.1 5742 99.98 True CONTIG 5742 5207 correct 1987812 2018322 30511 1 NC_007795.1 5743 99.98 True CONTIG 5743 30511 correct 406511 406825 1 315 NC_007795.1 5744 100.0 True fake: scaffold gap size wrong estimation (local) 407444 417588 934 11078 NC_007795.1 5744 99.96 True CONTIG 5744 11078 correct 2264234 2264396 163 1 NC_007795.1 5745 100.0 True fake: scaffold gap size wrong estimation (local) 2256255 2264208 8257 304 NC_007795.1 5745 99.97 True CONTIG 5745 8257 correct CONTIG 5746 5319 unaligned 1643506 1671422 27917 1 NC_007795.1 5747 100.0 True CONTIG 5747 27917 correct 341763 390706 48949 1 NC_007795.1 5748 99.98 True CONTIG 5748 48949 correct 417582 448761 1 31180 NC_007795.1 5749 99.97 True CONTIG 5749 31180 correct 392419 393820 1 1414 NC_007795.1 5750 99.16 True relocation, inconsistency = 1117 394938 400951 1415 7429 NC_007795.1 5750 99.82 True CONTIG 5750 7429 misassembled 294049 336800 1 42752 NC_007795.1 5751 99.97 True CONTIG 5751 42752 correct 74474 105171 30700 1 NC_007795.1 5752 99.95 True CONTIG 5752 30700 correct 2061920 2062169 312 561 NC_007795.1 5753 98.4 True unknown 2067879 2068420 7156 7697 NC_007795.1 5753 96.13 True unknown 2069446 2069895 8111 8560 NC_007795.1 5753 98.44 True unknown CONTIG 5753 9307 mis_unaligned 394123 400951 6830 1 NC_007795.1 5754 99.84 True CONTIG 5754 6830 correct 395090 400951 5863 1 NC_007795.1 5755 99.81 True fake: scaffold gap size wrong estimation (local) 392569 393913 8384 7040 NC_007795.1 5755 99.93 True fake: scaffold gap size wrong estimation (local) 385686 390706 15267 10247 NC_007795.1 5755 99.96 True CONTIG 5755 15267 correct 395090 400951 5863 1 NC_007795.1 5756 99.81 True fake: scaffold gap size wrong estimation (extensive) 392787 393913 9283 8157 NC_007795.1 5756 97.69 True local misassembly 392569 392696 9502 9375 NC_007795.1 5756 97.66 True fake: scaffold gap size wrong estimation (extensive) 385686 390706 15094 10074 NC_007795.1 5756 99.96 True CONTIG 5756 15094 correct 395090 400951 5863 1 NC_007795.1 5757 99.81 True fake: scaffold gap size wrong estimation (local) 391644 391997 9310 8957 NC_007795.1 5757 99.72 True fake: scaffold gap size wrong estimation (local) 385686 390706 15268 10248 NC_007795.1 5757 99.96 True CONTIG 5757 15268 correct 395090 405624 1 10535 NC_007795.1 5758 99.87 True CONTIG 5758 10535 correct 1820743 1832563 1 11821 NC_007795.1 5759 99.97 True CONTIG 5759 11821 correct 1815414 1821397 5984 1 NC_007795.1 5760 99.97 True fake: scaffold gap size wrong estimation (local) 1815018 1815148 6380 6250 NC_007795.1 5760 100.0 True CONTIG 5760 6380 correct 555032 603877 1 48845 NC_007795.1 5761 99.91 True CONTIG 5761 48845 correct 938713 973664 1 34941 NC_007795.1 5762 99.94 True CONTIG 5762 34941 correct