S1 E1 S2 E2 Reference Contig IDY Ambiguous Best_group CONTIG velvet.21 350 unaligned CONTIG velvet.35 366 unaligned CONTIG velvet.45 214 unaligned 29208554 29209333 1 780 NC_000014.9 velvet.47 100.0 True CONTIG velvet.47 780 correct 19694912 19700283 5371 1 NC_000014.9 velvet.50 99.91 True CONTIG velvet.50 5371 correct 45861849 45862608 1 760 NC_000014.9 velvet.62 99.87 True CONTIG velvet.62 760 correct CONTIG velvet.68 214 unaligned CONTIG velvet.74 270 unaligned CONTIG velvet.84 446 unaligned 62634497 62635120 25 648 NC_000014.9 velvet.85 99.68 True CONTIG velvet.85 648 correct 67397212 67398302 1 1091 NC_000014.9 velvet.91 100.0 True CONTIG velvet.91 1091 correct 105578596 105579096 501 1 NC_000014.9 velvet.98 100.0 True CONTIG velvet.98 501 correct CONTIG velvet.104 314 unaligned CONTIG velvet.109 450 unaligned CONTIG velvet.110 392 unaligned CONTIG velvet.122 337 unaligned CONTIG velvet.126 340 unaligned 52460230 52462393 187 2350 NC_000014.9 velvet.140 99.77 True fake: not a misassembly (possible transposable element) 52474732 52475439 22340 21633 NC_000014.9 velvet.140 100.0 True fake: not a misassembly (possible transposable element) 52481056 52484561 23217 26722 NC_000014.9 velvet.140 99.94 True fake: scaffold gap size wrong estimation (local) 52484864 52486308 27623 29067 NC_000014.9 velvet.140 100.0 True fake: scaffold gap size wrong estimation (local) 52486479 52488580 29696 31797 NC_000014.9 velvet.140 99.95 True fake: scaffold gap size wrong estimation (local) 52488862 52489917 32827 33882 NC_000014.9 velvet.140 100.0 True local misassembly 52490098 52491299 34392 35593 NC_000014.9 velvet.140 99.92 True fake: scaffold gap size wrong estimation (local) 52491635 52493027 36286 37711 NC_000014.9 velvet.140 100.0 True fake: scaffold gap size wrong estimation (local) 52493249 52495913 38467 41178 NC_000014.9 velvet.140 98.23 True fake: scaffold gap size wrong estimation (local) 52496882 52497616 42758 43492 NC_000014.9 velvet.140 98.5 True fake: scaffold gap size wrong estimation (local) 52497906 52498431 43757 44282 NC_000014.9 velvet.140 99.81 True fake: scaffold gap size wrong estimation (local) 52499001 52502702 45625 49326 NC_000014.9 velvet.140 99.95 True CONTIG velvet.140 52471 correct CONTIG velvet.155 424 unaligned CONTIG velvet.159 322 unaligned 65059279 65059851 1 573 NC_000014.9 velvet.165 100.0 True local misassembly 65054180 65055563 835 2218 NC_000014.9 velvet.165 99.93 True fake: scaffold gap size wrong estimation (local) 65055819 65059112 3040 6333 NC_000014.9 velvet.165 99.94 True relocation, scaffold gap is present, inconsistency = 14068001 50980983 50987807 13168 6344 NC_000014.9 velvet.165 99.93 True CONTIG velvet.165 13168 misassembled 25926627 25927621 1 995 NC_000014.9 velvet.175 100.0 True CONTIG velvet.175 995 correct 52814123 52814635 513 1 NC_000014.9 velvet.188 98.25 True CONTIG velvet.188 513 correct CONTIG velvet.195 492 unaligned 19495674 19499280 1 3606 NC_000014.9 velvet.205 99.67 True CONTIG velvet.205 3606 correct 19476586 19478393 1 1808 NC_000014.9 velvet.219 99.83 True CONTIG velvet.219 1808 correct 93339574 93340190 1 617 NC_000014.9 velvet.235 100.0 True CONTIG velvet.235 617 correct 18993430 18994241 812 1 NC_000014.9 velvet.241 99.88 True CONTIG velvet.241 812 correct 92010502 92011254 753 1 NC_000014.9 velvet.253 99.87 True CONTIG velvet.253 753 correct CONTIG velvet.258 362 unaligned CONTIG velvet.262 231 unaligned 19056702 19060799 4099 1 NC_000014.9 velvet.268 99.73 True CONTIG velvet.268 4099 correct 19036120 19042014 1 5896 NC_000014.9 velvet.280 99.78 True CONTIG velvet.280 5896 correct CONTIG velvet.304 213 unaligned 82458098 82463068 167 5231 NC_000014.9 velvet.306 99.3 True fake: scaffold gap size wrong estimation (local) 82465780 82466692 8340 9250 NC_000014.9 velvet.306 99.78 True relocation, scaffold gap is present, inconsistency = 10776859 93265007 93265652 31351 30706 NC_000014.9 velvet.306 99.85 True fake: scaffold gap size wrong estimation (local) 93262784 93264841 34001 31944 NC_000014.9 velvet.306 100.0 True relocation, scaffold gap is present, inconsistency = 10767854 82493211 82494919 34012 35720 NC_000014.9 velvet.306 99.82 True fake: scaffold gap size wrong estimation (local) 82495140 82505456 36533 46848 NC_000014.9 velvet.306 99.97 True CONTIG velvet.306 46848 misassembled 19191392 19192497 1106 1 NC_000014.9 velvet.314 99.82 True CONTIG velvet.314 1106 correct 48363157 48366289 3199 1 NC_000014.9 velvet.317 99.97 True CONTIG velvet.317 3272 correct 19676026 19678385 2360 1 NC_000014.9 velvet.328 99.79 True CONTIG velvet.328 2360 correct CONTIG velvet.337 325 unaligned CONTIG velvet.347 308 unaligned CONTIG velvet.350 269 unaligned 105583286 105584026 1 741 NC_000014.9 velvet.373 99.73 True CONTIG velvet.373 741 correct CONTIG velvet.384 207 unaligned CONTIG velvet.405 232 unaligned 24039662 24040293 632 1 NC_000014.9 velvet.445 99.53 True CONTIG velvet.445 632 correct 69609794 69612008 1 2215 NC_000014.9 velvet.460 100.0 True CONTIG velvet.460 2215 correct 91447145 91447668 1 524 NC_000014.9 velvet.465 99.81 True CONTIG velvet.465 524 correct CONTIG velvet.469 485 unaligned 55600877 55601798 922 1 NC_000014.9 velvet.470 100.0 True local misassembly 55602000 55602567 1500 933 NC_000014.9 velvet.470 100.0 True relocation, scaffold gap is present, inconsistency = 15459882 71063067 71064679 2118 3730 NC_000014.9 velvet.470 100.0 True CONTIG velvet.470 3730 misassembled CONTIG velvet.484 288 unaligned CONTIG velvet.489 352 unaligned CONTIG velvet.491 350 unaligned 34474088 34474831 11477 10704 NC_000014.9 velvet.502 95.74 True CONTIG velvet.502 11477 correct_unaligned CONTIG velvet.507 414 unaligned CONTIG velvet.514 245 unaligned CONTIG velvet.523 459 unaligned 19177940 19178448 509 1 NC_000014.9 velvet.539 99.8 True CONTIG velvet.539 509 correct CONTIG velvet.549 441 unaligned 19484916 19490272 1 5357 NC_000014.9 velvet.552 99.94 True CONTIG velvet.552 5357 correct CONTIG velvet.555 204 unaligned CONTIG velvet.570 202 unaligned CONTIG velvet.575 274 unaligned CONTIG velvet.580 337 unaligned 60192959 60194664 1 1706 NC_000014.9 velvet.588 99.88 True CONTIG velvet.588 1706 correct CONTIG velvet.591 443 unaligned CONTIG velvet.594 213 unaligned CONTIG velvet.597 328 unaligned CONTIG velvet.610 339 unaligned 51801825 51802605 1 781 NC_000014.9 velvet.616 99.87 True CONTIG velvet.616 781 correct 18938355 18939128 1 774 NC_000014.9 velvet.623 100.0 True CONTIG velvet.623 774 correct 18956254 18956809 556 1 NC_000014.9 velvet.629 100.0 True CONTIG velvet.629 556 correct 18326091 18327894 1 1804 NC_000014.9 velvet.681 100.0 True CONTIG velvet.681 1804 correct 18322766 18324347 1582 1 NC_000014.9 velvet.692 99.87 True CONTIG velvet.692 1582 correct CONTIG velvet.693 231 unaligned CONTIG velvet.726 388 unaligned CONTIG velvet.742 402 unaligned CONTIG velvet.750 242 unaligned CONTIG velvet.767 243 unaligned 104907013 104907870 1 858 NC_000014.9 velvet.768 100.0 True CONTIG velvet.768 858 correct 19173202 19173877 676 1 NC_000014.9 velvet.778 100.0 True CONTIG velvet.778 676 correct 19663307 19664609 1 1303 NC_000014.9 velvet.787 99.77 True CONTIG velvet.787 1303 correct CONTIG velvet.788 451 unaligned CONTIG velvet.794 283 unaligned 19312877 19313521 645 1 NC_000014.9 velvet.799 99.38 True CONTIG velvet.799 645 correct 19263034 19269648 6604 1 NC_000014.9 velvet.807 99.59 True CONTIG velvet.807 6604 correct CONTIG velvet.816 341 unaligned 18627885 18629691 1 1807 NC_000014.9 velvet.820 99.94 True CONTIG velvet.820 1807 correct 18698001 18699360 1360 1 NC_000014.9 velvet.823 99.26 True CONTIG velvet.823 1362 correct CONTIG velvet.826 455 unaligned CONTIG velvet.827 254 unaligned CONTIG velvet.858 236 unaligned 48977345 48978279 935 1 NC_000014.9 velvet.864 99.89 True CONTIG velvet.864 935 correct CONTIG velvet.899 269 unaligned 45347121 45348052 1 932 NC_000014.9 velvet.906 100.0 True CONTIG velvet.906 932 correct CONTIG velvet.910 441 unaligned 19662010 19663043 1 1034 NC_000014.9 velvet.912 99.9 True CONTIG velvet.912 1034 correct CONTIG velvet.916 220 unaligned CONTIG velvet.924 397 unaligned CONTIG velvet.931 571 unaligned CONTIG velvet.955 28124 unaligned CONTIG velvet.959 338 unaligned CONTIG velvet.967 279 unaligned CONTIG velvet.971 458 unaligned 106117581 106118459 7565 8444 NC_000014.9 velvet.985 99.77 True relocation, scaffold gap is present, inconsistency = -112054 106035594 106037321 37633 39353 NC_000014.9 velvet.985 99.13 True CONTIG velvet.985 39357 misassembled CONTIG velvet.988 270 unaligned 21165327 21165963 637 1 NC_000014.9 velvet.990 99.37 True CONTIG velvet.990 637 correct 94889350 94890705 1 1365 NC_000014.9 velvet.995 98.97 True CONTIG velvet.995 1365 correct CONTIG velvet.997 220 unaligned CONTIG velvet.1009 340 unaligned 19322716 19323244 1 529 NC_000014.9 velvet.1035 100.0 True CONTIG velvet.1035 529 correct 18872554 18873371 817 1 NC_000014.9 velvet.1036 99.39 True CONTIG velvet.1036 817 correct 19153234 19156481 1 3248 NC_000014.9 velvet.1049 99.6 True CONTIG velvet.1049 3248 correct CONTIG velvet.1050 386 unaligned 19068701 19069753 1 1053 NC_000014.9 velvet.1057 99.81 True CONTIG velvet.1057 1053 correct CONTIG velvet.1059 218 unaligned CONTIG velvet.1060 224 unaligned 31687093 31688325 1 1233 NC_000014.9 velvet.1063 100.0 True CONTIG velvet.1063 1233 correct 48622335 48624961 1 2615 NC_000014.9 velvet.1067 99.51 True CONTIG velvet.1067 2615 correct 19173871 19174564 694 1 NC_000014.9 velvet.1069 99.57 True CONTIG velvet.1069 694 correct 105560200 105560726 527 1 NC_000014.9 velvet.1070 100.0 True CONTIG velvet.1070 527 correct CONTIG velvet.1075 281 unaligned 99122329 99122909 1 578 NC_000014.9 velvet.1078 98.77 True CONTIG velvet.1078 578 correct 19435619 19436467 1 849 NC_000014.9 velvet.1080 100.0 True CONTIG velvet.1080 849 correct CONTIG velvet.1084 246 unaligned 19455749 19458046 1 2298 NC_000014.9 velvet.1091 99.78 True CONTIG velvet.1091 2298 correct 83204690 83207862 1 3197 NC_000014.9 velvet.1103 99.12 True CONTIG velvet.1103 3197 correct CONTIG velvet.1118 285 unaligned CONTIG velvet.1121 214 unaligned CONTIG velvet.1130 203 unaligned 91634749 91636173 148 2110 NC_000014.9 velvet.1140 99.13 True fake: scaffold gap size wrong estimation (local) 91636370 91638403 2664 4697 NC_000014.9 velvet.1140 99.9 True fake: scaffold gap size wrong estimation (local) 91638557 91640243 5701 7387 NC_000014.9 velvet.1140 99.88 True relocation, scaffold gap is present, inconsistency = 71782863 19854403 19855022 8678 8059 NC_000014.9 velvet.1140 99.68 True fake: scaffold gap size wrong estimation (local) 19845888 19853056 18723 10653 NC_000014.9 velvet.1140 97.61 True fake: scaffold gap size wrong estimation (local) 19844885 19845774 19860 18910 NC_000014.9 velvet.1140 100.0 True relocation, scaffold gap is present, inconsistency = 71801221 91647798 91648999 20663 21864 NC_000014.9 velvet.1140 99.75 True fake: scaffold gap size wrong estimation (local) 91649677 91652403 23433 26201 NC_000014.9 velvet.1140 99.52 True fake: scaffold gap size wrong estimation (local) 91652715 91656559 27234 31641 NC_000014.9 velvet.1140 99.16 True relocation, scaffold gap is present, inconsistency = 8359 91672030 91673616 40337 38753 NC_000014.9 velvet.1140 99.87 True inversion, scaffold gap is present 91669384 91670756 40348 41720 NC_000014.9 velvet.1140 99.93 True relocation, scaffold gap is present, inconsistency = -12436 91659564 91661548 42964 44949 NC_000014.9 velvet.1140 99.55 True fake: scaffold gap size wrong estimation (local) 91661786 91663426 45849 47536 NC_000014.9 velvet.1140 99.44 True fake: scaffold gap size wrong estimation (local) 91663676 91664260 47987 48571 NC_000014.9 velvet.1140 99.66 True relocation, scaffold gap is present, inconsistency = 32019 91697686 91698422 49978 50713 NC_000014.9 velvet.1140 99.86 True local misassembly 91695390 91697684 51007 53301 NC_000014.9 velvet.1140 100.0 True relocation, scaffold gap is present, inconsistency = 24717 91666159 91667617 57815 56357 NC_000014.9 velvet.1140 99.86 True fake: scaffold gap size wrong estimation (local) 91665166 91665665 60086 59587 NC_000014.9 velvet.1140 100.0 True relocation, scaffold gap is present, inconsistency = 7595 91673914 91676763 60740 63578 NC_000014.9 velvet.1140 99.23 True fake: scaffold gap size wrong estimation (local) 91678250 91684631 65900 72281 NC_000014.9 velvet.1140 99.91 True fake: scaffold gap size wrong estimation (local) 91684887 91687702 73296 76099 NC_000014.9 velvet.1140 99.54 True fake: scaffold gap size wrong estimation (local) 91692204 91694197 76110 78104 NC_000014.9 velvet.1140 99.95 True relocation, scaffold gap is present, inconsistency = -37126 91658725 91659532 79758 80565 NC_000014.9 velvet.1140 99.88 True fake: scaffold gap size wrong estimation (local) 91687982 91690069 106457 108544 NC_000014.9 velvet.1140 100.0 True fake: scaffold gap size wrong estimation (local) 91690184 91691923 109528 111310 NC_000014.9 velvet.1140 99.82 True fake: scaffold gap size wrong estimation (local) 91700251 91701834 114462 116045 NC_000014.9 velvet.1140 99.94 True fake: scaffold gap size wrong estimation (local) 91701938 91707598 116874 122624 NC_000014.9 velvet.1140 99.95 True fake: scaffold gap size wrong estimation (local) 91707911 91709425 123509 125023 NC_000014.9 velvet.1140 99.87 True fake: scaffold gap size wrong estimation (local) 91709710 91711280 125784 127354 NC_000014.9 velvet.1140 99.87 True fake: scaffold gap size wrong estimation (extensive) 91723236 91728166 130283 135619 NC_000014.9 velvet.1140 99.9 True relocation, scaffold gap is present, inconsistency = -33928 91694474 91695148 135855 136529 NC_000014.9 velvet.1140 100.0 True fake: scaffold gap size wrong estimation (local) 91715583 91716337 157155 157909 NC_000014.9 velvet.1140 99.87 True fake: scaffold gap size wrong estimation (local) 91716617 91721596 158672 163760 NC_000014.9 velvet.1140 97.74 True relocation, scaffold gap is present, inconsistency = 10768097 102489704 102490920 164987 163771 NC_000014.9 velvet.1140 99.92 True relocation, scaffold gap is present, inconsistency = 10775403 91713317 91714290 164998 165971 NC_000014.9 velvet.1140 99.9 True fake: scaffold gap size wrong estimation (local) 91736557 91737357 184574 185374 NC_000014.9 velvet.1140 99.88 True fake: scaffold gap size wrong estimation (local) 91737856 91739369 187133 188646 NC_000014.9 velvet.1140 100.0 True fake: scaffold gap size wrong estimation (local) 91740293 91740819 190361 190887 NC_000014.9 velvet.1140 98.67 True indel: indel (> 5bp) 91740832 91741577 190888 191633 NC_000014.9 velvet.1140 98.39 True fake: scaffold gap size wrong estimation (local) 91742311 91744889 193154 195732 NC_000014.9 velvet.1140 99.96 True fake: scaffold gap size wrong estimation (local) 91745154 91748739 196815 200464 NC_000014.9 velvet.1140 99.55 True CONTIG velvet.1140 202704 misassembled CONTIG velvet.1141 261 unaligned 19693106 19693718 1 613 NC_000014.9 velvet.1144 100.0 True CONTIG velvet.1144 613 correct 42246556 42247381 1 825 NC_000014.9 velvet.1150 99.64 True CONTIG velvet.1150 825 correct CONTIG velvet.1152 306 unaligned CONTIG velvet.1174 200 unaligned CONTIG velvet.1185 335 unaligned CONTIG velvet.1191 403 unaligned CONTIG velvet.1193 207 unaligned CONTIG velvet.1194 405 unaligned 19326467 19327896 1430 1 NC_000014.9 velvet.1196 99.93 True CONTIG velvet.1196 1430 correct CONTIG velvet.1212 231 unaligned 105743109 105744004 1 895 NC_000014.9 velvet.1227 97.77 True CONTIG velvet.1227 895 correct CONTIG velvet.1231 339 unaligned 18994583 18995162 1 580 NC_000014.9 velvet.1237 99.66 True CONTIG velvet.1237 580 correct CONTIG velvet.1238 211 unaligned CONTIG velvet.1241 394 unaligned 20884752 20885641 1 890 NC_000014.9 velvet.1242 99.33 True CONTIG velvet.1242 890 correct CONTIG velvet.1264 214 unaligned 18641785 18642812 1028 1 NC_000014.9 velvet.1265 99.71 True CONTIG velvet.1265 1028 correct CONTIG velvet.1272 421 unaligned 19655785 19656414 1 630 NC_000014.9 velvet.1294 99.84 True CONTIG velvet.1294 630 correct 106579480 106580001 1 522 NC_000014.9 velvet.1296 100.0 True CONTIG velvet.1296 522 correct CONTIG velvet.1303 296 unaligned CONTIG velvet.1310 453 unaligned CONTIG velvet.1323 234 unaligned CONTIG velvet.1329 794 unaligned CONTIG velvet.1336 361 unaligned 68310835 68311645 1 811 NC_000014.9 velvet.1360 100.0 True CONTIG velvet.1360 811 correct CONTIG velvet.1363 258 unaligned 74062586 74063203 30842 31459 NC_000014.9 velvet.1364 99.51 True fake: scaffold gap size wrong estimation (local) 74064353 74067673 33511 37655 NC_000014.9 velvet.1364 99.7 True CONTIG velvet.1364 37969 correct CONTIG velvet.1376 485 unaligned 37572526 37574756 1 2231 NC_000014.9 velvet.1382 99.96 True CONTIG velvet.1382 2231 correct CONTIG velvet.1387 226 unaligned CONTIG velvet.1402 211 unaligned CONTIG velvet.1407 289 unaligned CONTIG velvet.1413 438 unaligned 19021335 19022522 1189 1 NC_000014.9 velvet.1426 99.83 True CONTIG velvet.1426 1189 correct 19178427 19178991 565 1 NC_000014.9 velvet.1434 99.65 True CONTIG velvet.1434 565 correct CONTIG velvet.1441 297 unaligned CONTIG velvet.1445 324 unaligned 19259315 19263037 3723 1 NC_000014.9 velvet.1448 99.62 True CONTIG velvet.1448 3723 correct 104025248 104030212 6334 1329 NC_000014.9 velvet.1451 99.08 True relocation, scaffold gap is present, inconsistency = 9310286 94694343 94696365 24931 26964 NC_000014.9 velvet.1451 97.31 True fake: scaffold gap size wrong estimation (local) 94699044 94701100 30047 32095 NC_000014.9 velvet.1451 99.56 True fake: scaffold gap size wrong estimation (local) 94701470 94702343 33415 34288 NC_000014.9 velvet.1451 99.89 True fake: scaffold gap size wrong estimation (local) 94703626 94704557 36624 37555 NC_000014.9 velvet.1451 100.0 True relocation, scaffold gap is present, inconsistency = 9318475 104023043 104024745 39216 37566 NC_000014.9 velvet.1451 96.93 True fake: scaffold gap size wrong estimation (local) 104021645 104022474 41269 40440 NC_000014.9 velvet.1451 95.3 True fake: scaffold gap size wrong estimation (local) 104014544 104021006 48982 42291 NC_000014.9 velvet.1451 99.84 True fake: scaffold gap size wrong estimation (local) 104010572 104013934 53772 50410 NC_000014.9 velvet.1451 99.82 True fake: scaffold gap size wrong estimation (extensive) 103999082 104000227 58050 56906 NC_000014.9 velvet.1451 99.91 True fake: scaffold gap size wrong estimation (local) 103994967 103998775 62858 59050 NC_000014.9 velvet.1451 99.82 True fake: scaffold gap size wrong estimation (local) 103993139 103994775 65430 63748 NC_000014.9 velvet.1451 99.81 True fake: scaffold gap size wrong estimation (local) 103991884 103992654 66888 66118 NC_000014.9 velvet.1451 99.61 True fake: scaffold gap size wrong estimation (local) 103988426 103991453 70967 67894 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 103985500 103986824 74527 73203 NC_000014.9 velvet.1451 99.77 True relocation, scaffold gap is present, inconsistency = -24299 104008048 104009788 76278 74538 NC_000014.9 velvet.1451 99.94 True fake: scaffold gap size wrong estimation (local) 104004615 104007621 80521 77546 NC_000014.9 velvet.1451 98.9 True fake: scaffold gap size wrong estimation (local) 104002985 104004348 83023 81660 NC_000014.9 velvet.1451 99.85 True fake: scaffold gap size wrong estimation (local) 104002126 104002666 84162 83492 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 104000763 104001662 86125 85226 NC_000014.9 velvet.1451 99.78 True relocation, scaffold gap is present, inconsistency = 9261675 94737348 94738564 86649 87865 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 94766191 94776585 113317 123711 NC_000014.9 velvet.1451 99.91 True fake: scaffold gap size wrong estimation (local) 94776867 94778514 124637 126335 NC_000014.9 velvet.1451 99.63 True fake: scaffold gap size wrong estimation (local) 94778744 94780248 127096 128600 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 94780543 94781426 129298 130181 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 94783144 94783658 132788 133302 NC_000014.9 velvet.1451 100.0 True relocation, scaffold gap is present, inconsistency = -26577 94757223 94759617 133444 135838 NC_000014.9 velvet.1451 99.96 True fake: scaffold gap size wrong estimation (local) 94760433 94761006 137182 137755 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 94761098 94764145 138358 141428 NC_000014.9 velvet.1451 98.96 True fake: scaffold gap size wrong estimation (local) 94764270 94765995 142471 144115 NC_000014.9 velvet.1451 95.22 True fake: scaffold gap size wrong estimation (local) 94781692 94782509 154043 154860 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 94784236 94784994 157661 158419 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 94785260 94786051 159382 160173 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 94786190 94788203 160512 162525 NC_000014.9 velvet.1451 99.85 True relocation, scaffold gap is present, inconsistency = 16408 94804736 94805276 162650 163190 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 94805408 94807738 164059 166389 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 94808055 94808744 167324 168013 NC_000014.9 velvet.1451 99.71 True fake: scaffold gap size wrong estimation (local) 94808980 94810959 168470 170447 NC_000014.9 velvet.1451 99.85 True relocation, scaffold gap is present, inconsistency = 16361 94790596 94791363 172470 171703 NC_000014.9 velvet.1451 100.0 True inversion, scaffold gap is present 94789258 94790623 172481 173888 NC_000014.9 velvet.1451 96.32 True fake: scaffold gap size wrong estimation (local) 94793904 94795333 178315 179744 NC_000014.9 velvet.1451 99.93 True fake: scaffold gap size wrong estimation (local) 94795423 94796773 180312 181662 NC_000014.9 velvet.1451 99.93 True fake: scaffold gap size wrong estimation (local) 94797987 94799013 183434 184460 NC_000014.9 velvet.1451 99.81 True fake: scaffold gap size wrong estimation (local) 94799285 94802320 185428 188463 NC_000014.9 velvet.1451 99.97 True fake: scaffold gap size wrong estimation (local) 94802485 94803073 189391 189979 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 94803242 94803850 190151 190759 NC_000014.9 velvet.1451 99.84 True fake: scaffold gap size wrong estimation (local) 94812403 94813190 199578 200365 NC_000014.9 velvet.1451 100.0 True local misassembly 94811260 94812279 200376 201395 NC_000014.9 velvet.1451 99.9 True fake: scaffold gap size wrong estimation (local) 94813420 94815307 203296 205183 NC_000014.9 velvet.1451 99.95 True fake: scaffold gap size wrong estimation (local) 94816524 94817159 207367 208002 NC_000014.9 velvet.1451 98.43 True local misassembly 94817406 94818148 208003 208745 NC_000014.9 velvet.1451 98.38 True fake: scaffold gap size wrong estimation (local) 94818431 94819858 210276 211741 NC_000014.9 velvet.1451 99.5 True fake: scaffold gap size wrong estimation (local) 94821332 94821800 213263 213774 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (extensive) 94831310 94831825 214278 214793 NC_000014.9 velvet.1451 99.81 True local misassembly 94830345 94831227 214804 215686 NC_000014.9 velvet.1451 99.77 True relocation, scaffold gap is present, inconsistency = -8378 94822860 94827252 215697 220184 NC_000014.9 velvet.1451 99.86 True fake: scaffold gap size wrong estimation (local) 94828661 94829502 222305 223147 NC_000014.9 velvet.1451 99.53 True fake: scaffold gap size wrong estimation (local) 94852630 94856044 247752 251226 NC_000014.9 velvet.1451 99.97 True relocation, scaffold gap is present, inconsistency = -35682353 59173702 59174646 251237 252181 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 59174922 59176091 252321 253490 NC_000014.9 velvet.1451 100.0 True relocation, scaffold gap is present, inconsistency = 35678927 94856159 94860432 254631 259381 NC_000014.9 velvet.1451 99.81 True relocation, scaffold gap is present, inconsistency = -10904 94849696 94851293 259549 261137 NC_000014.9 velvet.1451 99.37 True relocation, scaffold gap is present, inconsistency = -29659 94821856 94822761 261359 262264 NC_000014.9 velvet.1451 99.89 True fake: scaffold gap size wrong estimation (extensive) 94832050 94835379 262275 265604 NC_000014.9 velvet.1451 99.91 True fake: scaffold gap size wrong estimation (local) 94835380 94838341 266766 269727 NC_000014.9 velvet.1451 99.93 True fake: not a misassembly (possible transposable element) 94819971 94821267 269738 271024 NC_000014.9 velvet.1451 99.23 True fake: not a misassembly (possible transposable element) 94864232 94865551 295296 296615 NC_000014.9 velvet.1451 99.85 True fake: scaffold gap size wrong estimation (local) 94865843 94866374 297221 297752 NC_000014.9 velvet.1451 99.81 True fake: scaffold gap size wrong estimation (local) 94866579 94868349 298545 300315 NC_000014.9 velvet.1451 99.72 True relocation, scaffold gap is present, inconsistency = -50115864 44752496 44753150 300326 300980 NC_000014.9 velvet.1451 100.0 True fake: not a misassembly (possible transposable element) 103078579 103081478 323862 326803 NC_000014.9 velvet.1451 99.86 True fake: not a misassembly (possible transposable element) 44780488 44790972 326814 337415 NC_000014.9 velvet.1451 99.99 True relocation, scaffold gap is present, inconsistency = 47382718 92173701 92174658 337426 338383 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 92176419 92177108 341041 341730 NC_000014.9 velvet.1451 100.0 True relocation, scaffold gap is present, inconsistency = -39163589 53013671 53014766 341882 342977 NC_000014.9 velvet.1451 99.91 True fake: scaffold gap size wrong estimation (local) 53015285 53016126 343711 344601 NC_000014.9 velvet.1451 100.0 True fake: not a misassembly (possible transposable element) 92179416 92180283 344612 345479 NC_000014.9 velvet.1451 99.88 True fake: not a misassembly (possible transposable element) 53016429 53018237 345490 347298 NC_000014.9 velvet.1451 99.5 True fake: not a misassembly (possible transposable element) 92182900 92183510 347739 348349 NC_000014.9 velvet.1451 100.0 True fake: not a misassembly (possible transposable element) 53018491 53022177 348360 352099 NC_000014.9 velvet.1451 99.84 True relocation, scaffold gap is present, inconsistency = 31696280 21320867 21322171 353443 352139 NC_000014.9 velvet.1451 99.92 True fake: scaffold gap size wrong estimation (local) 21319512 21320294 355345 354563 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 21317116 21318204 358790 357702 NC_000014.9 velvet.1451 99.91 True relocation, scaffold gap is present, inconsistency = 31710158 53029277 53029831 359705 360259 NC_000014.9 velvet.1451 100.0 True relocation, scaffold gap is present, inconsistency = 39069828 92099670 92101223 361823 360270 NC_000014.9 velvet.1451 99.94 True fake: scaffold gap size wrong estimation (local) 92098462 92099586 363915 362791 NC_000014.9 velvet.1451 97.51 True local misassembly 92097755 92098308 364469 363916 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 92094216 92095081 368382 367517 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 92093118 92093944 370663 369837 NC_000014.9 velvet.1451 98.79 True local misassembly 92091959 92092813 371518 370664 NC_000014.9 velvet.1451 98.71 True indel: indel (> 5bp) 92091401 92091920 372038 371519 NC_000014.9 velvet.1451 99.81 True relocation, scaffold gap is present, inconsistency = 70764936 21323328 21326454 375176 372049 NC_000014.9 velvet.1451 99.87 True relocation, scaffold gap is present, inconsistency = 23488501 44814966 44821697 375187 381890 NC_000014.9 velvet.1451 98.64 True fake: scaffold gap size wrong estimation (local) 44826396 44827057 389174 389835 NC_000014.9 velvet.1451 99.7 True fake: scaffold gap size wrong estimation (local) 44827301 44838943 390967 402670 NC_000014.9 velvet.1451 99.38 True fake: scaffold gap size wrong estimation (local) 44839193 44840565 403785 405157 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 44840829 44841877 405329 406377 NC_000014.9 velvet.1451 100.0 True relocation, scaffold gap is present, inconsistency = 47218526 92062255 92065491 411465 408229 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 92061002 92061970 413708 412454 NC_000014.9 velvet.1451 99.89 True relocation, scaffold gap is present, inconsistency = 35177167 56879847 56883311 414232 417694 NC_000014.9 velvet.1451 99.91 True fake: scaffold gap size wrong estimation (local) 56883564 56891092 418731 426259 NC_000014.9 velvet.1451 99.96 True relocation, scaffold gap is present, inconsistency = 16170077 73065822 73066361 431451 430912 NC_000014.9 velvet.1451 99.81 True fake: scaffold gap size wrong estimation (local) 73061919 73062852 434356 433423 NC_000014.9 velvet.1451 99.89 True fake: scaffold gap size wrong estimation (local) 73060299 73061036 437191 436454 NC_000014.9 velvet.1451 98.64 True local misassembly 73057435 73059845 439602 437192 NC_000014.9 velvet.1451 99.96 True relocation, scaffold gap is present, inconsistency = -7237 73063427 73064408 440847 439866 NC_000014.9 velvet.1451 100.0 True relocation, scaffold gap is present, inconsistency = 1570200 71491792 71492729 442282 441345 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 71489787 71491519 444483 442751 NC_000014.9 velvet.1451 99.94 True relocation, scaffold gap is present, inconsistency = -1565782 73054686 73055263 445366 444789 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 73052285 73052882 448925 448328 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 73049459 73050004 452552 452014 NC_000014.9 velvet.1451 98.72 True fake: scaffold gap size wrong estimation (local) 73046991 73048387 456060 454664 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 73041142 73041802 463309 462649 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 73039432 73040291 466647 465788 NC_000014.9 velvet.1451 100.0 True relocation, scaffold gap is present, inconsistency = 10766 73026135 73026780 469178 468533 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 73021366 73022899 471273 469740 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 73018941 73019668 473654 472927 NC_000014.9 velvet.1451 99.73 True fake: scaffold gap size wrong estimation (local) 73016841 73018153 476424 475112 NC_000014.9 velvet.1451 99.92 True relocation, scaffold gap is present, inconsistency = -10249 72985884 72986461 517630 517053 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 72984529 72985368 520368 519529 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 72980826 72982829 524892 522889 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 72979654 72980500 526951 526105 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 72978575 72979251 527717 527041 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 72977399 72978308 529894 528985 NC_000014.9 velvet.1451 100.0 True fake: not a misassembly (possible transposable element) 50311171 50314310 533598 530338 NC_000014.9 velvet.1451 97.85 True fake: not a misassembly (possible transposable element) 72973493 72976502 536618 533609 NC_000014.9 velvet.1451 100.0 True fake: not a misassembly (possible transposable element) 50308410 50309275 537494 536629 NC_000014.9 velvet.1451 100.0 True fake: not a misassembly (possible transposable element) 72972165 72972693 538678 538150 NC_000014.9 velvet.1451 99.81 True fake: scaffold gap size wrong estimation (local) 72969242 72971360 542326 540208 NC_000014.9 velvet.1451 100.0 True fake: not a misassembly (possible transposable element) 73026815 73028426 542679 544290 NC_000014.9 velvet.1451 100.0 True fake: not a misassembly (possible transposable element) 72966304 72968644 547469 545113 NC_000014.9 velvet.1451 96.48 True fake: scaffold gap size wrong estimation (local) 72964994 72966221 549374 548147 NC_000014.9 velvet.1451 99.84 True relocation, scaffold gap is present, inconsistency = 46193 73013631 73014979 550591 551939 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 73015687 73016275 552747 553335 NC_000014.9 velvet.1451 100.0 True relocation, scaffold gap is present, inconsistency = 16470 73032937 73033478 553527 554068 NC_000014.9 velvet.1451 100.0 True relocation, scaffold gap is present, inconsistency = -22161995 50888505 50889404 571090 571989 NC_000014.9 velvet.1451 99.89 True fake: scaffold gap size wrong estimation (local) 50889632 50891323 572411 574101 NC_000014.9 velvet.1451 99.65 True fake: scaffold gap size wrong estimation (local) 50897375 50898951 574210 575786 NC_000014.9 velvet.1451 100.0 True relocation, scaffold gap is present, inconsistency = -7417 50891545 50893189 575797 577441 NC_000014.9 velvet.1451 99.88 True fake: scaffold gap size wrong estimation (local) 50899171 50907789 577452 585831 NC_000014.9 velvet.1451 96.5 True fake: scaffold gap size wrong estimation (local) 50908170 50912392 586950 591955 NC_000014.9 velvet.1451 99.95 True relocation, scaffold gap is present, inconsistency = 22005476 72925113 72927331 601418 599200 NC_000014.9 velvet.1451 99.91 True fake: scaffold gap size wrong estimation (local) 72924047 72924919 603464 602592 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 72897124 72898162 628793 627755 NC_000014.9 velvet.1451 99.62 True fake: scaffold gap size wrong estimation (local) 72896281 72896788 629440 628933 NC_000014.9 velvet.1451 99.8 True fake: scaffold gap size wrong estimation (local) 72890502 72892937 634684 632198 NC_000014.9 velvet.1451 99.79 True relocation, scaffold gap is present, inconsistency = 22654408 50234770 50235496 636008 635282 NC_000014.9 velvet.1451 99.72 True inversion, scaffold gap is present 50239890 50240789 637937 638836 NC_000014.9 velvet.1451 99.89 True fake: scaffold gap size wrong estimation (local) 50242259 50243680 640813 642234 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 50244355 50245875 643818 645338 NC_000014.9 velvet.1451 100.0 True relocation, scaffold gap is present, inconsistency = 5922200 56168352 56168859 645615 646122 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 56168943 56171762 646406 649225 NC_000014.9 velvet.1451 99.82 True relocation, scaffold gap is present, inconsistency = -5921852 50250202 50251596 649517 650911 NC_000014.9 velvet.1451 99.93 True fake: scaffold gap size wrong estimation (local) 50253518 50254821 653472 654775 NC_000014.9 velvet.1451 99.92 True relocation, scaffold gap is present, inconsistency = 22677902 72935517 72936290 658342 657569 NC_000014.9 velvet.1451 98.58 True local misassembly 72934555 72935247 659035 658343 NC_000014.9 velvet.1451 100.0 True fake: not a misassembly (possible transposable element) 50257527 50258087 659214 659774 NC_000014.9 velvet.1451 99.82 True fake: not a misassembly (possible transposable element) 72933560 72934131 661576 661005 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 72930539 72931972 665441 664007 NC_000014.9 velvet.1451 99.93 True fake: scaffold gap size wrong estimation (local) 72928978 72929917 668107 667168 NC_000014.9 velvet.1451 99.79 True fake: scaffold gap size wrong estimation (local) 72920849 72922312 669581 668118 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 72917028 72920559 676019 671822 NC_000014.9 velvet.1451 99.88 True fake: scaffold gap size wrong estimation (local) 72916294 72916899 676955 676350 NC_000014.9 velvet.1451 99.5 True fake: scaffold gap size wrong estimation (local) 72913358 72914505 680733 679586 NC_000014.9 velvet.1451 99.91 True fake: scaffold gap size wrong estimation (local) 72911141 72912582 683857 682416 NC_000014.9 velvet.1451 99.86 True relocation, scaffold gap is present, inconsistency = 5934218 66972304 66973503 687277 688476 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 66973772 66975625 689213 691066 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 66975752 66977176 691609 693033 NC_000014.9 velvet.1451 99.93 True fake: scaffold gap size wrong estimation (local) 66977461 66980798 694054 697399 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 66981054 66982998 698259 700203 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 66983272 66991634 701196 709625 NC_000014.9 velvet.1451 99.95 True relocation, scaffold gap is present, inconsistency = 5906739 72898384 72903897 715394 709636 NC_000014.9 velvet.1451 99.84 True fake: scaffold gap size wrong estimation (local) 72875382 72879100 742438 738723 NC_000014.9 velvet.1451 99.84 True relocation, scaffold gap is present, inconsistency = -32127506 105000542 105001214 744779 744112 NC_000014.9 velvet.1451 98.96 True fake: scaffold gap size wrong estimation (local) 104998416 105000270 747513 745659 NC_000014.9 velvet.1451 99.89 True fake: scaffold gap size wrong estimation (local) 104992046 104997735 754711 749022 NC_000014.9 velvet.1451 99.81 True relocation, scaffold gap is present, inconsistency = 32086265 72904000 72905493 754999 756492 NC_000014.9 velvet.1451 99.87 True fake: not a misassembly (possible transposable element) 105030048 105030697 756949 757598 NC_000014.9 velvet.1451 98.31 True fake: not a misassembly (possible transposable element) 72906630 72907527 759207 760104 NC_000014.9 velvet.1451 98.33 True local misassembly 72907949 72908530 760105 760686 NC_000014.9 velvet.1451 98.11 True fake: scaffold gap size wrong estimation (local) 72908720 72909764 761058 762102 NC_000014.9 velvet.1451 99.9 True relocation, scaffold gap is present, inconsistency = -22664590 50246483 50249632 763411 766926 NC_000014.9 velvet.1451 96.23 True relocation, scaffold gap is present, inconsistency = 25236009 75486520 75487662 768947 767805 NC_000014.9 velvet.1451 99.13 True relocation, scaffold gap is present, inconsistency = 42696876 32786596 32789412 772308 769179 NC_000014.9 velvet.1451 99.75 True fake: scaffold gap size wrong estimation (local) 32780675 32781292 772936 772319 NC_000014.9 velvet.1451 100.0 True relocation, scaffold gap is present, inconsistency = -42705262 75483973 75485926 774900 772947 NC_000014.9 velvet.1451 99.64 True relocation, scaffold gap is present, inconsistency = 42697670 32782106 32786292 779098 774911 NC_000014.9 velvet.1451 99.79 True relocation, scaffold gap is present, inconsistency = 10770 32769546 32771325 780888 779109 NC_000014.9 velvet.1451 99.44 True fake: scaffold gap size wrong estimation (local) 32765692 32769030 787602 784264 NC_000014.9 velvet.1451 99.4 True relocation, scaffold gap is present, inconsistency = -37814 32800747 32802812 790361 788296 NC_000014.9 velvet.1451 99.37 True fake: scaffold gap size wrong estimation (local) 32798504 32799455 792187 791236 NC_000014.9 velvet.1451 97.27 True fake: scaffold gap size wrong estimation (local) 32795597 32796134 795847 795302 NC_000014.9 velvet.1451 99.81 True fake: scaffold gap size wrong estimation (local) 32794071 32794791 798359 797639 NC_000014.9 velvet.1451 99.45 True fake: scaffold gap size wrong estimation (local) 32758726 32764920 832544 826309 NC_000014.9 velvet.1451 99.9 True fake: scaffold gap size wrong estimation (local) 32755770 32758449 836264 833585 NC_000014.9 velvet.1451 99.96 True fake: scaffold gap size wrong estimation (local) 32753220 32755506 840834 838548 NC_000014.9 velvet.1451 96.81 True fake: scaffold gap size wrong estimation (local) 32751679 32753219 842431 840891 NC_000014.9 velvet.1451 99.61 True relocation, scaffold gap is present, inconsistency = 42724524 75478790 75479582 843478 844319 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 75479868 75482228 845269 847629 NC_000014.9 velvet.1451 99.87 True local misassembly 75482269 75483121 847871 848723 NC_000014.9 velvet.1451 100.0 True local misassembly 75477270 75478555 848734 850019 NC_000014.9 velvet.1451 100.0 True inversion, scaffold gap is present 75473322 75474842 851550 850030 NC_000014.9 velvet.1451 99.8 True fake: scaffold gap size wrong estimation (local) 75470164 75473095 855477 852546 NC_000014.9 velvet.1451 99.59 True local misassembly 75466415 75470163 859829 856081 NC_000014.9 velvet.1451 99.79 True fake: scaffold gap size wrong estimation (local) 75465450 75466154 861284 860517 NC_000014.9 velvet.1451 99.84 True fake: scaffold gap size wrong estimation (local) 75447930 75458301 873183 862812 NC_000014.9 velvet.1451 99.97 True fake: scaffold gap size wrong estimation (local) 75444170 75447691 877621 874100 NC_000014.9 velvet.1451 99.8 True fake: scaffold gap size wrong estimation (local) 75437163 75443813 885547 878769 NC_000014.9 velvet.1451 99.89 True fake: not a misassembly (possible transposable element) 85043740 85046349 888167 885558 NC_000014.9 velvet.1451 99.96 True fake: not a misassembly (possible transposable element) 75433551 75437014 891641 888178 NC_000014.9 velvet.1451 99.97 True relocation, scaffold gap is present, inconsistency = -9610263 85042426 85043730 893025 891725 NC_000014.9 velvet.1451 99.69 True fake: scaffold gap size wrong estimation (local) 85039664 85042341 896565 893888 NC_000014.9 velvet.1451 99.96 True relocation, scaffold gap is present, inconsistency = -13794 85047289 85053447 902720 896576 NC_000014.9 velvet.1451 98.42 True fake: scaffold gap size wrong estimation (local) 85046500 85047139 904839 904201 NC_000014.9 velvet.1451 99.53 True fake: scaffold gap size wrong estimation (local) 85015968 85018387 931821 929402 NC_000014.9 velvet.1451 99.92 True fake: scaffold gap size wrong estimation (local) 85010023 85011378 933586 932231 NC_000014.9 velvet.1451 99.85 True fake: scaffold gap size wrong estimation (local) 85008515 85009843 936035 934707 NC_000014.9 velvet.1451 99.7 True relocation, scaffold gap is present, inconsistency = -7210 85014084 85015714 937676 936046 NC_000014.9 velvet.1451 99.75 True relocation, scaffold gap is present, inconsistency = 9617261 75394554 75396701 937798 939945 NC_000014.9 velvet.1451 99.77 True fake: scaffold gap size wrong estimation (local) 75397005 75398000 940981 941976 NC_000014.9 velvet.1451 100.0 True relocation, scaffold gap is present, inconsistency = -704291 74694209 74694734 942476 943001 NC_000014.9 velvet.1451 100.0 True relocation, scaffold gap is present, inconsistency = 10316665 85011410 85013747 945349 943012 NC_000014.9 velvet.1451 99.7 True relocation, scaffold gap is present, inconsistency = 9610309 75398234 75401090 945360 948215 NC_000014.9 velvet.1451 99.58 True fake: scaffold gap size wrong estimation (local) 75401363 75403337 949278 951252 NC_000014.9 velvet.1451 99.9 True relocation, scaffold gap is present, inconsistency = 9588454 85005152 85008221 968729 964613 NC_000014.9 velvet.1451 96.55 True fake: scaffold gap size wrong estimation (local) 84998215 85004823 976776 969649 NC_000014.9 velvet.1451 99.88 True fake: scaffold gap size wrong estimation (local) 84979910 84984022 996455 992343 NC_000014.9 velvet.1451 99.98 True relocation, scaffold gap is present, inconsistency = -8900 84984043 84988799 1001219 996466 NC_000014.9 velvet.1451 99.87 True fake: scaffold gap size wrong estimation (local) 84974606 84979637 1006407 1001230 NC_000014.9 velvet.1451 99.98 True relocation, scaffold gap is present, inconsistency = 33232740 51724241 51734930 1013343 1024197 NC_000014.9 velvet.1451 99.94 True fake: scaffold gap size wrong estimation (local) 51740794 51741524 1027746 1028476 NC_000014.9 velvet.1451 99.86 True relocation, scaffold gap is present, inconsistency = 12901 51771347 51772131 1046182 1045398 NC_000014.9 velvet.1451 100.0 True inversion, scaffold gap is present 51760062 51764792 1049124 1053854 NC_000014.9 velvet.1451 100.0 True fake: scaffold gap size wrong estimation (local) 51765020 51767625 1054905 1057468 NC_000014.9 velvet.1451 98.31 True fake: scaffold gap size wrong estimation (local) 51768289 51769534 1059072 1060313 NC_000014.9 velvet.1451 99.68 True CONTIG velvet.1451 1060522 misassembled CONTIG velvet.1454 323 unaligned CONTIG velvet.1457 360 unaligned CONTIG velvet.1460 453 unaligned CONTIG velvet.1464 206 unaligned 18918076 18920541 2474 9 NC_000014.9 velvet.1465 99.84 True CONTIG velvet.1465 2474 correct 19687515 19688693 1 1179 NC_000014.9 velvet.1469 99.66 True CONTIG velvet.1469 1179 correct CONTIG velvet.1485 222 unaligned CONTIG velvet.1500 3768 unaligned 31871030 31871533 1 504 NC_000014.9 velvet.1511 99.01 True CONTIG velvet.1511 504 correct CONTIG velvet.1525 325 unaligned 44163421 44165317 1 1897 NC_000014.9 velvet.1526 99.95 True CONTIG velvet.1526 1897 correct CONTIG velvet.1531 319 unaligned CONTIG velvet.1547 225 unaligned CONTIG velvet.1552 221 unaligned 63250929 63251879 953 1 NC_000014.9 velvet.1554 99.89 True CONTIG velvet.1554 953 correct CONTIG velvet.1560 329 unaligned CONTIG velvet.1581 324 unaligned CONTIG velvet.1582 264 unaligned CONTIG velvet.1583 217 unaligned 94738542 94739522 1 981 NC_000014.9 velvet.1585 100.0 True CONTIG velvet.1585 981 correct CONTIG velvet.1601 253 unaligned CONTIG velvet.1610 235 unaligned CONTIG velvet.1631 298 unaligned CONTIG velvet.1646 333 unaligned CONTIG velvet.1648 313 unaligned CONTIG velvet.1651 210 unaligned 60691225 60691805 1 581 NC_000014.9 velvet.1661 100.0 True fake: scaffold gap size wrong estimation (extensive) 60702444 60702959 1671 2186 NC_000014.9 velvet.1661 100.0 True fake: scaffold gap size wrong estimation (local) 60711815 60714683 9498 12366 NC_000014.9 velvet.1661 99.86 True fake: scaffold gap size wrong estimation (local) 60714999 60716058 13462 14541 NC_000014.9 velvet.1661 100.0 True relocation, scaffold gap is present, inconsistency = -25503 60690566 60691234 14552 15220 NC_000014.9 velvet.1661 100.0 True fake: not a misassembly (possible transposable element) 60704786 60705407 17421 18042 NC_000014.9 velvet.1661 99.68 True fake: not a misassembly (possible transposable element) 60695320 60696204 20842 21726 NC_000014.9 velvet.1661 97.97 True local misassembly 60696480 60697106 21727 22353 NC_000014.9 velvet.1661 98.41 True fake: scaffold gap size wrong estimation (local) 60723816 60725431 43836 45451 NC_000014.9 velvet.1661 99.88 True fake: scaffold gap size wrong estimation (local) 60726684 60727990 47549 48855 NC_000014.9 velvet.1661 100.0 True CONTIG velvet.1661 48855 misassembled 20504689 20505260 1 572 NC_000014.9 velvet.1663 100.0 True CONTIG velvet.1663 572 correct CONTIG velvet.1671 248 unaligned CONTIG velvet.1673 212 unaligned CONTIG velvet.1679 353 unaligned CONTIG velvet.1691 349 unaligned CONTIG velvet.1697 485 unaligned CONTIG velvet.1699 412 unaligned 34542810 34543485 1 676 NC_000014.9 velvet.1700 99.85 True CONTIG velvet.1700 676 correct CONTIG velvet.1709 343 unaligned 104411197 104412071 1 875 NC_000014.9 velvet.1714 100.0 True CONTIG velvet.1714 875 correct 19088254 19089035 1 782 NC_000014.9 velvet.1719 99.74 True CONTIG velvet.1719 782 correct CONTIG velvet.1725 300 unaligned CONTIG velvet.1754 207 unaligned 68858106 68858882 1 777 NC_000014.9 velvet.1773 99.61 True CONTIG velvet.1773 777 correct CONTIG velvet.1774 386 unaligned 19064282 19065055 789 14 NC_000014.9 velvet.1779 99.61 True CONTIG velvet.1779 789 correct CONTIG velvet.1781 293 unaligned CONTIG velvet.1788 203 unaligned 18335308 18339524 1 4217 NC_000014.9 velvet.1807 99.98 True CONTIG velvet.1807 4217 correct CONTIG velvet.1809 247 unaligned CONTIG velvet.1810 273 unaligned CONTIG velvet.1816 221 unaligned CONTIG velvet.1840 402 unaligned CONTIG velvet.1841 234 unaligned CONTIG velvet.1860 278 unaligned CONTIG velvet.1869 400 unaligned CONTIG velvet.1872 239 unaligned 72042390 72044616 2225 1 NC_000014.9 velvet.1882 99.87 True CONTIG velvet.1882 2225 correct 19019768 19020968 1 1201 NC_000014.9 velvet.1899 99.58 True CONTIG velvet.1899 1201 correct 18301061 18303174 2120 7 NC_000014.9 velvet.1911 99.81 True CONTIG velvet.1911 2120 correct 69584421 69585031 1 611 NC_000014.9 velvet.1924 100.0 True CONTIG velvet.1924 611 correct CONTIG velvet.1933 384 unaligned CONTIG velvet.1934 226 unaligned CONTIG velvet.1946 226 unaligned CONTIG velvet.1979 241 unaligned 34558164 34559014 1 851 NC_000014.9 velvet.1983 100.0 True CONTIG velvet.1983 851 correct CONTIG velvet.2009 325 unaligned 106481685 106482527 1 844 NC_000014.9 velvet.2017 99.29 True CONTIG velvet.2017 844 correct CONTIG velvet.2019 317 unaligned CONTIG velvet.2020 3903 unaligned CONTIG velvet.2026 357 unaligned 73563553 73564070 518 1 NC_000014.9 velvet.2046 99.61 True CONTIG velvet.2046 518 correct CONTIG velvet.2059 303 unaligned CONTIG velvet.2062 227 unaligned 75475125 75475883 1 759 NC_000014.9 velvet.2070 99.87 True CONTIG velvet.2070 759 correct CONTIG velvet.2094 243 unaligned CONTIG velvet.2109 222 unaligned CONTIG velvet.2118 307 unaligned CONTIG velvet.2128 276 unaligned CONTIG velvet.2130 407 unaligned 47623202 47624196 1 995 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 47624415 47626474 2330 4389 NC_000014.9 velvet.2142 99.9 True relocation, scaffold gap is present, inconsistency = -17622 47611452 47614111 6989 9615 NC_000014.9 velvet.2142 98.72 True relocation, scaffold gap is present, inconsistency = 55775767 103393131 103393774 12868 13555 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 103394028 103394825 14255 15052 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 103395071 103397354 15063 18087 NC_000014.9 velvet.2142 99.78 True fake: scaffold gap size wrong estimation (local) 103397634 103399447 19130 20943 NC_000014.9 velvet.2142 99.94 True relocation, scaffold gap is present, inconsistency = 22563 103423219 103423958 22152 22891 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = -55836927 47588296 47591811 24156 27879 NC_000014.9 velvet.2142 97.45 True fake: scaffold gap size wrong estimation (local) 47593869 47595248 30596 31975 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 47595595 47604461 33252 42188 NC_000014.9 velvet.2142 99.91 True fake: scaffold gap size wrong estimation (local) 47604632 47609277 43150 48590 NC_000014.9 velvet.2142 99.96 True fake: scaffold gap size wrong estimation (local) 47614386 47617221 51540 54375 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 47617489 47623231 55402 61221 NC_000014.9 velvet.2142 98.59 True fake: scaffold gap size wrong estimation (local) 47628011 47636539 61232 69878 NC_000014.9 velvet.2142 99.89 True fake: scaffold gap size wrong estimation (local) 47637005 47645339 72491 81607 NC_000014.9 velvet.2142 99.94 True fake: scaffold gap size wrong estimation (local) 47646102 47649530 83125 86553 NC_000014.9 velvet.2142 99.91 True fake: scaffold gap size wrong estimation (local) 47649722 47651161 87327 88766 NC_000014.9 velvet.2142 99.93 True fake: scaffold gap size wrong estimation (local) 47651258 47661766 89159 100307 NC_000014.9 velvet.2142 99.92 True fake: scaffold gap size wrong estimation (local) 47662049 47665534 101387 104873 NC_000014.9 velvet.2142 99.83 True fake: scaffold gap size wrong estimation (local) 47667088 47675038 108255 116197 NC_000014.9 velvet.2142 99.81 True fake: scaffold gap size wrong estimation (local) 47678170 47683667 116208 121706 NC_000014.9 velvet.2142 99.85 True fake: scaffold gap size wrong estimation (local) 47683947 47687026 122858 125961 NC_000014.9 velvet.2142 99.1 True fake: not a misassembly (possible transposable element) 47675359 47678138 125972 128751 NC_000014.9 velvet.2142 99.93 True fake: not a misassembly (possible transposable element) 47700477 47701284 140475 141282 NC_000014.9 velvet.2142 99.75 True fake: scaffold gap size wrong estimation (local) 47701380 47706508 141992 147303 NC_000014.9 velvet.2142 99.76 True fake: scaffold gap size wrong estimation (local) 47706772 47711559 148399 153286 NC_000014.9 velvet.2142 99.85 True fake: scaffold gap size wrong estimation (local) 47711679 47715897 154167 158385 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 47717434 47718092 160711 161369 NC_000014.9 velvet.2142 95.6 True fake: scaffold gap size wrong estimation (local) 47718093 47721272 161807 164986 NC_000014.9 velvet.2142 98.99 True local misassembly 47724297 47725969 164987 166659 NC_000014.9 velvet.2142 99.34 True fake: scaffold gap size wrong estimation (local) 47726238 47736388 167135 179418 NC_000014.9 velvet.2142 99.91 True fake: scaffold gap size wrong estimation (local) 47738042 47741888 181755 186209 NC_000014.9 velvet.2142 99.34 True local misassembly 47736776 47737508 186220 186952 NC_000014.9 velvet.2142 99.86 True fake: scaffold gap size wrong estimation (local) 47742683 47749301 190031 197575 NC_000014.9 velvet.2142 99.97 True fake: scaffold gap size wrong estimation (local) 47749632 47752032 198772 201172 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 47752299 47753558 202293 203552 NC_000014.9 velvet.2142 99.84 True fake: scaffold gap size wrong estimation (local) 47754603 47757659 205131 208504 NC_000014.9 velvet.2142 99.73 True relocation, scaffold gap is present, inconsistency = 22748 47786758 47790501 214855 219168 NC_000014.9 velvet.2142 99.27 True fake: scaffold gap size wrong estimation (local) 47790685 47792133 219942 221390 NC_000014.9 velvet.2142 99.93 True fake: scaffold gap size wrong estimation (local) 47792356 47793572 221651 223549 NC_000014.9 velvet.2142 99.83 True relocation, scaffold gap is present, inconsistency = -35630 47757953 47760453 223560 226039 NC_000014.9 velvet.2142 96.43 True fake: scaffold gap size wrong estimation (local) 47761046 47761957 227350 228261 NC_000014.9 velvet.2142 96.16 True local misassembly 47761958 47764194 229078 231314 NC_000014.9 velvet.2142 99.6 True fake: scaffold gap size wrong estimation (local) 47764426 47765975 232154 233703 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 47771651 47779942 233714 242610 NC_000014.9 velvet.2142 99.96 True fake: scaffold gap size wrong estimation (local) 47780227 47786398 243658 250092 NC_000014.9 velvet.2142 99.87 True relocation, scaffold gap is present, inconsistency = -20250 47766159 47768123 250103 252067 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 47768326 47769595 252912 254181 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 47769900 47771110 254651 255861 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 47800699 47809032 282700 292280 NC_000014.9 velvet.2142 97.37 True fake: scaffold gap size wrong estimation (local) 47809152 47811590 292900 295338 NC_000014.9 velvet.2142 99.88 True fake: scaffold gap size wrong estimation (local) 47813082 47815339 297791 300025 NC_000014.9 velvet.2142 98.61 True fake: scaffold gap size wrong estimation (local) 47816315 47818209 301894 303788 NC_000014.9 velvet.2142 99.89 True relocation, scaffold gap is present, inconsistency = 14756311 62574531 62575348 303799 304616 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 62575352 62575889 307410 307947 NC_000014.9 velvet.2142 100.0 True inversion, scaffold gap is present 62572774 62573452 309087 308409 NC_000014.9 velvet.2142 99.85 True fake: scaffold gap size wrong estimation (local) 62571490 62572567 310789 309712 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = 14723936 47838113 47841956 320894 316387 NC_000014.9 velvet.2142 99.37 True fake: scaffold gap size wrong estimation (local) 47834010 47837885 325763 321802 NC_000014.9 velvet.2142 99.45 True fake: scaffold gap size wrong estimation (local) 47831868 47833799 328726 326816 NC_000014.9 velvet.2142 98.49 True fake: scaffold gap size wrong estimation (local) 47829826 47830953 331587 330460 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 47828925 47829498 332433 331862 NC_000014.9 velvet.2142 98.95 True inversion, scaffold gap is present 47818212 47828236 332444 343219 NC_000014.9 velvet.2142 99.85 True fake: not a misassembly (possible transposable element) 57895406 57900631 353286 348080 NC_000014.9 velvet.2142 99.62 True fake: not a misassembly (possible transposable element) 47842185 47844013 353297 355125 NC_000014.9 velvet.2142 99.84 True fake: scaffold gap size wrong estimation (local) 47845153 47845737 356163 356747 NC_000014.9 velvet.2142 98.29 True indel: indel (> 5bp) 47845754 47847671 356748 358665 NC_000014.9 velvet.2142 99.43 True fake: scaffold gap size wrong estimation (local) 47847754 47848685 359756 360713 NC_000014.9 velvet.2142 96.15 True fake: not a misassembly (possible transposable element) 62611203 62612972 361161 362930 NC_000014.9 velvet.2142 99.77 True fake: not a misassembly (possible transposable element) 47852266 47857418 362941 368092 NC_000014.9 velvet.2142 99.77 True relocation, scaffold gap is present, inconsistency = 14755113 62633247 62634358 388808 389919 NC_000014.9 velvet.2142 99.37 True relocation, scaffold gap is present, inconsistency = 4760755 57859005 57868462 404200 393949 NC_000014.9 velvet.2142 99.97 True fake: scaffold gap size wrong estimation (local) 57857232 57857932 406750 406050 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 57856288 57856984 407576 406880 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 57849423 57855220 415288 409491 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 57843225 57849185 422223 416263 NC_000014.9 velvet.2142 100.0 True inversion, scaffold gap is present 57839735 57843121 423464 426850 NC_000014.9 velvet.2142 99.97 True relocation, scaffold gap is present, inconsistency = 13634266 71477398 71479518 426861 428972 NC_000014.9 velvet.2142 99.53 True relocation, scaffold gap is present, inconsistency = -21471430 50012336 50014601 433220 435546 NC_000014.9 velvet.2142 99.87 True fake: scaffold gap size wrong estimation (extensive) 50023348 50024605 435557 436814 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 50024860 50026187 437046 438373 NC_000014.9 velvet.2142 99.25 True relocation, scaffold gap is present, inconsistency = -21947 50034529 50035551 468662 469684 NC_000014.9 velvet.2142 99.71 True fake: scaffold gap size wrong estimation (local) 50035820 50037594 470628 472402 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 50037868 50041873 473381 477386 NC_000014.9 velvet.2142 99.98 True fake: scaffold gap size wrong estimation (local) 50042023 50042665 478317 478959 NC_000014.9 velvet.2142 100.0 True fake: not a misassembly (possible transposable element) 50055599 50058580 478970 482003 NC_000014.9 velvet.2142 99.97 True fake: not a misassembly (possible transposable element) 50050477 50052358 482016 483897 NC_000014.9 velvet.2142 99.79 True fake: scaffold gap size wrong estimation (local) 50053227 50055007 485648 487419 NC_000014.9 velvet.2142 99.32 True relocation, scaffold gap is present, inconsistency = 45287084 95342599 95343295 487927 488661 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = -45299793 50043726 50046384 488885 491543 NC_000014.9 velvet.2142 99.92 True relocation, scaffold gap is present, inconsistency = 11915 50059326 50062933 492570 496226 NC_000014.9 velvet.2142 99.92 True fake: scaffold gap size wrong estimation (local) 50063031 50068851 496942 502745 NC_000014.9 velvet.2142 99.69 True fake: scaffold gap size wrong estimation (local) 50070232 50071496 504887 506151 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 50073418 50073953 508913 509448 NC_000014.9 velvet.2142 99.81 True relocation, scaffold gap is present, inconsistency = 45303144 95377108 95378635 509459 510957 NC_000014.9 velvet.2142 97.96 True local misassembly 95372672 95375220 511844 514399 NC_000014.9 velvet.2142 98.25 True relocation, scaffold gap is present, inconsistency = -74704942 20670454 20671472 514575 515593 NC_000014.9 velvet.2142 100.0 True local misassembly 20671700 20672931 515594 516825 NC_000014.9 velvet.2142 98.94 True fake: not a misassembly (possible transposable element) 95375365 95376801 516836 518272 NC_000014.9 velvet.2142 99.93 True fake: not a misassembly (possible transposable element) 20673220 20674076 518283 519139 NC_000014.9 velvet.2142 99.88 True local misassembly 20674329 20675084 519140 519895 NC_000014.9 velvet.2142 98.68 True fake: scaffold gap size wrong estimation (local) 20675120 20677610 520920 523307 NC_000014.9 velvet.2142 95.77 True relocation, scaffold gap is present, inconsistency = 29404133 50081754 50089939 523318 531772 NC_000014.9 velvet.2142 99.96 True fake: scaffold gap size wrong estimation (local) 50090066 50092850 532757 535541 NC_000014.9 velvet.2142 99.93 True fake: scaffold gap size wrong estimation (local) 50092985 50093825 536634 537474 NC_000014.9 velvet.2142 99.88 True fake: scaffold gap size wrong estimation (local) 50094030 50094713 537564 538247 NC_000014.9 velvet.2142 99.85 True fake: scaffold gap size wrong estimation (local) 50095751 50097950 540160 542359 NC_000014.9 velvet.2142 99.91 True fake: scaffold gap size wrong estimation (local) 50098239 50101755 543219 546690 NC_000014.9 velvet.2142 95.29 True fake: scaffold gap size wrong estimation (local) 50102026 50104693 547670 550333 NC_000014.9 velvet.2142 99.81 True fake: scaffold gap size wrong estimation (local) 50104726 50105403 551395 552072 NC_000014.9 velvet.2142 100.0 True local misassembly 50105622 50106777 552073 553228 NC_000014.9 velvet.2142 99.13 True fake: scaffold gap size wrong estimation (local) 50108224 50109990 554281 556047 NC_000014.9 velvet.2142 100.0 True local misassembly 50107551 50108152 559720 560321 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 50113946 50115169 560786 562009 NC_000014.9 velvet.2142 99.84 True local misassembly 50110250 50111182 562168 563100 NC_000014.9 velvet.2142 99.68 True fake: scaffold gap size wrong estimation (local) 50115457 50119566 563111 567286 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 50120056 50120756 568356 569056 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 50121034 50123397 569990 572383 NC_000014.9 velvet.2142 99.27 True fake: scaffold gap size wrong estimation (local) 50123675 50127157 573570 577052 NC_000014.9 velvet.2142 99.97 True fake: scaffold gap size wrong estimation (local) 50127443 50129432 578071 580060 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 50129686 50132340 581073 583727 NC_000014.9 velvet.2142 99.92 True fake: scaffold gap size wrong estimation (local) 50133501 50134821 585750 587070 NC_000014.9 velvet.2142 99.92 True fake: scaffold gap size wrong estimation (local) 50135730 50136605 588868 589743 NC_000014.9 velvet.2142 99.89 True local misassembly 50136851 50137872 589744 590765 NC_000014.9 velvet.2142 99.02 True fake: scaffold gap size wrong estimation (local) 50161166 50161812 611325 611971 NC_000014.9 velvet.2142 97.84 True fake: scaffold gap size wrong estimation (local) 50162333 50162913 612958 613538 NC_000014.9 velvet.2142 98.28 True relocation, scaffold gap is present, inconsistency = 11147853 61314012 61315767 616784 618540 NC_000014.9 velvet.2142 99.77 True fake: scaffold gap size wrong estimation (local) 61320630 61327994 618551 626048 NC_000014.9 velvet.2142 98.49 True fake: scaffold gap size wrong estimation (local) 61329524 61330882 628334 629692 NC_000014.9 velvet.2142 99.93 True fake: scaffold gap size wrong estimation (local) 61331050 61336908 630716 636545 NC_000014.9 velvet.2142 98.23 True fake: scaffold gap size wrong estimation (local) 61349862 61352415 643134 645687 NC_000014.9 velvet.2142 99.92 True relocation, scaffold gap is present, inconsistency = 20968 61374201 61375183 646505 647486 NC_000014.9 velvet.2142 99.29 True fake: scaffold gap size wrong estimation (local) 61376036 61378231 649177 651372 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 61378370 61380298 652286 654212 NC_000014.9 velvet.2142 99.9 True fake: scaffold gap size wrong estimation (local) 61380383 61382208 654353 656178 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = 35992546 97374887 97384314 665738 656311 NC_000014.9 velvet.2142 99.99 True fake: scaffold gap size wrong estimation (local) 97369387 97370031 666393 665749 NC_000014.9 velvet.2142 99.69 True relocation, scaffold gap is present, inconsistency = 36005381 61362370 61363995 666404 668029 NC_000014.9 velvet.2142 99.94 True fake: scaffold gap size wrong estimation (local) 61364159 61364664 668705 669207 NC_000014.9 velvet.2142 99.41 True fake: scaffold gap size wrong estimation (local) 61364849 61367756 669831 672736 NC_000014.9 velvet.2142 99.93 True fake: scaffold gap size wrong estimation (local) 61368017 61369998 673676 675647 NC_000014.9 velvet.2142 99.49 True fake: scaffold gap size wrong estimation (local) 61370249 61373180 676582 679513 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = 35995784 97370132 97373163 683712 680681 NC_000014.9 velvet.2142 99.97 True relocation, scaffold gap is present, inconsistency = 211121 97153053 97157839 684884 689615 NC_000014.9 velvet.2142 98.75 True fake: scaffold gap size wrong estimation (local) 97158127 97161076 690579 693718 NC_000014.9 velvet.2142 96.26 True relocation, scaffold gap is present, inconsistency = 35703479 61441130 61453679 707783 694687 NC_000014.9 velvet.2142 98.96 True relocation, scaffold gap is present, inconsistency = 41086693 20353506 20354426 708714 707794 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = 41054683 61409737 61414522 709342 714725 NC_000014.9 velvet.2142 99.77 True fake: scaffold gap size wrong estimation (local) 61414782 61416042 714998 716258 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 61416144 61424728 717117 725719 NC_000014.9 velvet.2142 99.28 True inversion, scaffold gap is present 61424719 61427583 728569 725730 NC_000014.9 velvet.2142 98.64 True relocation, scaffold gap is present, inconsistency = 41080140 20343044 20344568 730104 728580 NC_000014.9 velvet.2142 99.93 True relocation, scaffold gap is present, inconsistency = -57599773 77941335 77942806 731585 730115 NC_000014.9 velvet.2142 99.8 True fake: not a misassembly (possible transposable element) 20349656 20351198 733138 731596 NC_000014.9 velvet.2142 100.0 True fake: not a misassembly (possible transposable element) 77939466 77941280 735335 733521 NC_000014.9 velvet.2142 99.83 True relocation, scaffold gap is present, inconsistency = 57595980 20341285 20342201 737536 736620 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 20337611 20339457 744545 742699 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 20335803 20337359 747024 745468 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 20303686 20307019 776703 773243 NC_000014.9 velvet.2142 99.97 True relocation, scaffold gap is present, inconsistency = 41146557 61454239 61455046 777366 778173 NC_000014.9 velvet.2142 99.75 True fake: scaffold gap size wrong estimation (local) 61455343 61464429 778963 789008 NC_000014.9 velvet.2142 96.84 True fake: scaffold gap size wrong estimation (local) 61488319 61490666 812764 815111 NC_000014.9 velvet.2142 99.83 True relocation, scaffold gap is present, inconsistency = 3496100 64986777 64988433 816778 815122 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = -7990 64994114 64994756 817431 816789 NC_000014.9 velvet.2142 100.0 True local misassembly 64994766 64995944 818620 817442 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 64985912 64986750 821625 820787 NC_000014.9 velvet.2142 98.81 True local misassembly 64983429 64985583 823780 821626 NC_000014.9 velvet.2142 99.95 True fake: scaffold gap size wrong estimation (local) 64980319 64983135 828194 824826 NC_000014.9 velvet.2142 99.1 True fake: scaffold gap size wrong estimation (local) 64978134 64978647 831228 830715 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 64957194 64957835 847792 847151 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 64956412 64956918 848693 848187 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = 1223930 66180859 66183592 848704 851437 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 66207565 66214883 877587 884919 NC_000014.9 velvet.2142 99.81 True relocation, scaffold gap is present, inconsistency = 1450670 67665564 67667689 884930 887055 NC_000014.9 velvet.2142 99.91 True fake: not a misassembly (possible transposable element) 64959863 64961630 888833 887066 NC_000014.9 velvet.2142 99.94 True fake: not a misassembly (possible transposable element) 67667974 67669284 888844 890154 NC_000014.9 velvet.2142 99.92 True relocation, scaffold gap is present, inconsistency = 2707949 64958117 64959745 892062 890434 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = -1282988 66232357 66240711 900919 892456 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 66229567 66232232 903995 901330 NC_000014.9 velvet.2142 99.62 True local misassembly 66222952 66225780 906824 903996 NC_000014.9 velvet.2142 99.4 True fake: scaffold gap size wrong estimation (local) 66221083 66222951 908849 906981 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 66214950 66220190 915829 910589 NC_000014.9 velvet.2142 99.96 True relocation, scaffold gap is present, inconsistency = 1257562 64949750 64956160 923467 917057 NC_000014.9 velvet.2142 99.98 True fake: scaffold gap size wrong estimation (local) 64941139 64949434 933216 924592 NC_000014.9 velvet.2142 99.92 True relocation, scaffold gap is present, inconsistency = 48703 64890780 64892425 933227 934872 NC_000014.9 velvet.2142 99.57 True fake: scaffold gap size wrong estimation (local) 64893037 64893678 936370 937011 NC_000014.9 velvet.2142 99.53 True relocation, scaffold gap is present, inconsistency = -32796 64861299 64862636 937428 938765 NC_000014.9 velvet.2142 99.78 True fake: scaffold gap size wrong estimation (local) 64862789 64864202 938776 941355 NC_000014.9 velvet.2142 99.57 True fake: scaffold gap size wrong estimation (local) 64864450 64867611 942603 945764 NC_000014.9 velvet.2142 99.53 True relocation, scaffold gap is present, inconsistency = 11109 64906688 64907735 973732 974779 NC_000014.9 velvet.2142 99.9 True local misassembly 64901192 64903010 975044 976850 NC_000014.9 velvet.2142 99.12 True fake: scaffold gap size wrong estimation (local) 64908735 64909259 977282 977806 NC_000014.9 velvet.2142 97.9 True fake: not a misassembly (possible transposable element) 66247726 66250416 977817 980507 NC_000014.9 velvet.2142 100.0 True fake: not a misassembly (possible transposable element) 64912061 64913328 981530 982797 NC_000014.9 velvet.2142 98.82 True fake: scaffold gap size wrong estimation (local) 64913823 64916605 984161 986943 NC_000014.9 velvet.2142 99.96 True fake: not a misassembly (possible transposable element) 64918611 64919648 989051 988020 NC_000014.9 velvet.2142 99.42 True fake: not a misassembly (possible transposable element) 64917723 64918632 989062 989971 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 64919889 64922331 991786 994593 NC_000014.9 velvet.2142 99.12 True fake: scaffold gap size wrong estimation (local) 64922610 64923222 995526 996138 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 64923304 64926228 996285 1000012 NC_000014.9 velvet.2142 99.9 True fake: scaffold gap size wrong estimation (local) 64926350 64928481 1000115 1002245 NC_000014.9 velvet.2142 99.86 True relocation, scaffold gap is present, inconsistency = 10121 64938613 64939957 1002256 1003600 NC_000014.9 velvet.2142 99.93 True fake: scaffold gap size wrong estimation (local) 64940021 64941152 1003611 1004790 NC_000014.9 velvet.2142 99.91 True local misassembly 64936625 64938340 1004801 1006516 NC_000014.9 velvet.2142 99.77 True relocation, scaffold gap is present, inconsistency = -9809 64928542 64929923 1006527 1007908 NC_000014.9 velvet.2142 99.86 True fake: scaffold gap size wrong estimation (local) 64930148 64931279 1008284 1009415 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 64931398 64934078 1010322 1013002 NC_000014.9 velvet.2142 99.89 True fake: scaffold gap size wrong estimation (local) 64934368 64935063 1014255 1014950 NC_000014.9 velvet.2142 98.42 True fake: scaffold gap size wrong estimation (local) 64935354 64936402 1015062 1016098 NC_000014.9 velvet.2142 98.85 True fake: scaffold gap size wrong estimation (extensive) 64962249 64964275 1032181 1034121 NC_000014.9 velvet.2142 95.63 True fake: scaffold gap size wrong estimation (local) 64965443 64966404 1036120 1037081 NC_000014.9 velvet.2142 98.96 True fake: scaffold gap size wrong estimation (local) 64966575 64967404 1037173 1038002 NC_000014.9 velvet.2142 99.88 True fake: scaffold gap size wrong estimation (local) 64967618 64972129 1039061 1043572 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 64972397 64973269 1044637 1045509 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 64974484 64974987 1047148 1047651 NC_000014.9 velvet.2142 95.83 True fake: scaffold gap size wrong estimation (local) 64976553 64977420 1050333 1051200 NC_000014.9 velvet.2142 99.88 True fake: scaffold gap size wrong estimation (local) 64979551 64980069 1054129 1054647 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (extensive) 64996797 64999183 1063272 1065658 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 64999451 65000437 1066594 1067580 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 65000869 65002353 1068151 1069635 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 65002632 65004677 1070762 1072807 NC_000014.9 velvet.2142 99.95 True fake: scaffold gap size wrong estimation (local) 65004967 65011174 1073329 1079795 NC_000014.9 velvet.2142 99.92 True fake: scaffold gap size wrong estimation (local) 65011463 65013616 1080896 1083041 NC_000014.9 velvet.2142 99.53 True fake: scaffold gap size wrong estimation (local) 65013811 65014566 1083761 1084516 NC_000014.9 velvet.2142 99.87 True fake: scaffold gap size wrong estimation (local) 65015444 65016940 1085855 1087351 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = -32855961 32164480 32168842 1090852 1095214 NC_000014.9 velvet.2142 99.77 True fake: scaffold gap size wrong estimation (local) 32169146 32170841 1096197 1097892 NC_000014.9 velvet.2142 99.88 True fake: scaffold gap size wrong estimation (local) 32171154 32172314 1098555 1099716 NC_000014.9 velvet.2142 99.57 True fake: scaffold gap size wrong estimation (local) 32172604 32174602 1100654 1102652 NC_000014.9 velvet.2142 99.9 True fake: scaffold gap size wrong estimation (local) 32194167 32195236 1122670 1123739 NC_000014.9 velvet.2142 99.81 True fake: scaffold gap size wrong estimation (local) 32195505 32196824 1124133 1125452 NC_000014.9 velvet.2142 99.92 True relocation, scaffold gap is present, inconsistency = 32972932 65170354 65171633 1126050 1127329 NC_000014.9 velvet.2142 99.92 True relocation, scaffold gap is present, inconsistency = 10875 65203348 65203954 1148169 1148775 NC_000014.9 velvet.2142 99.84 True relocation, scaffold gap is present, inconsistency = 28093587 93297552 93300253 1148786 1151487 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = -28103594 65197935 65199249 1152763 1154077 NC_000014.9 velvet.2142 100.0 True local misassembly 65199515 65200094 1154078 1154657 NC_000014.9 velvet.2142 98.28 True fake: scaffold gap size wrong estimation (local) 65204208 65205630 1154668 1156090 NC_000014.9 velvet.2142 99.23 True fake: scaffold gap size wrong estimation (local) 65205631 65206516 1158075 1158960 NC_000014.9 velvet.2142 98.87 True fake: scaffold gap size wrong estimation (local) 65206517 65207486 1159007 1159976 NC_000014.9 velvet.2142 98.04 True fake: scaffold gap size wrong estimation (local) 65228354 65231005 1180794 1183445 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 65231214 65232500 1184475 1185761 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 65233091 65234155 1186341 1187414 NC_000014.9 velvet.2142 99.53 True relocation, scaffold gap is present, inconsistency = 28038786 93276191 93276886 1191359 1190664 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 93272255 93276017 1195975 1192213 NC_000014.9 velvet.2142 99.95 True relocation, scaffold gap is present, inconsistency = 20149953 73119567 73122291 1195986 1198710 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = 15898513 89020936 89021644 1198842 1199550 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 89022010 89026281 1200820 1205091 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 89026554 89031626 1206217 1211308 NC_000014.9 velvet.2142 99.63 True relocation, scaffold gap is present, inconsistency = 29638584 59384065 59385353 1215213 1213925 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = 12042 59361960 59366895 1225276 1220341 NC_000014.9 velvet.2142 99.9 True fake: scaffold gap size wrong estimation (local) 59357754 59358567 1226100 1225287 NC_000014.9 velvet.2142 100.0 True local misassembly 59358839 59361926 1229198 1226111 NC_000014.9 velvet.2142 99.94 True fake: scaffold gap size wrong estimation (local) 59354334 59357493 1233305 1230146 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 59351756 59354047 1236670 1234340 NC_000014.9 velvet.2142 99.96 True relocation, scaffold gap is present, inconsistency = 29714782 89074998 89075535 1242839 1243373 NC_000014.9 velvet.2142 99.44 True fake: scaffold gap size wrong estimation (local) 89079393 89080772 1244346 1245725 NC_000014.9 velvet.2142 99.93 True relocation, scaffold gap is present, inconsistency = 29727647 59327675 59351735 1271575 1245736 NC_000014.9 velvet.2142 99.77 True relocation, scaffold gap is present, inconsistency = 29733940 89086883 89094844 1272783 1280969 NC_000014.9 velvet.2142 99.96 True relocation, scaffold gap is present, inconsistency = -38991 89055864 89056963 1280980 1282036 NC_000014.9 velvet.2142 95.95 True fake: scaffold gap size wrong estimation (local) 89057177 89059202 1282862 1284908 NC_000014.9 velvet.2142 98.73 True fake: scaffold gap size wrong estimation (local) 89059295 89060786 1285397 1286888 NC_000014.9 velvet.2142 99.93 True relocation, scaffold gap is present, inconsistency = 29751179 59303829 59306063 1291175 1288941 NC_000014.9 velvet.2142 99.96 True fake: scaffold gap size wrong estimation (local) 59302927 59303647 1292510 1291790 NC_000014.9 velvet.2142 99.72 True relocation, scaffold gap is present, inconsistency = -35708442 95010269 95011358 1293605 1292521 NC_000014.9 velvet.2142 99.45 True fake: scaffold gap size wrong estimation (local) 94986167 94987045 1322209 1321331 NC_000014.9 velvet.2142 99.54 True fake: scaffold gap size wrong estimation (extensive) 94973937 94976251 1326832 1324521 NC_000014.9 velvet.2142 99.83 True local misassembly 94977050 94980827 1330743 1326843 NC_000014.9 velvet.2142 99.6 True relocation, scaffold gap is present, inconsistency = 35666946 59306083 59310093 1334875 1330754 NC_000014.9 velvet.2142 99.97 True relocation, scaffold gap is present, inconsistency = 29784761 89094865 89095899 1334886 1335920 NC_000014.9 velvet.2142 99.61 True relocation, scaffold gap is present, inconsistency = 29772033 59311969 59322392 1347036 1336360 NC_000014.9 velvet.2142 99.91 True fake: scaffold gap size wrong estimation (local) 59310971 59311881 1348105 1347196 NC_000014.9 velvet.2142 99.67 True relocation, scaffold gap is present, inconsistency = 29800954 89112846 89114898 1348116 1350164 NC_000014.9 velvet.2142 99.71 True fake: scaffold gap size wrong estimation (local) 89115179 89129998 1350563 1366839 NC_000014.9 velvet.2142 99.51 True fake: scaffold gap size wrong estimation (local) 89130912 89131792 1368576 1369456 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = 29840442 59280537 59287049 1379392 1372877 NC_000014.9 velvet.2142 99.89 True relocation, scaffold gap is present, inconsistency = 35568855 94872740 94874269 1396228 1397757 NC_000014.9 velvet.2142 99.61 True relocation, scaffold gap is present, inconsistency = 66101 94940381 94941096 1398483 1397768 NC_000014.9 velvet.2142 99.72 True local misassembly 94939278 94940226 1399432 1398484 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 94936925 94937681 1402796 1402040 NC_000014.9 velvet.2142 100.0 True fake: not a misassembly (possible transposable element) 59249060 59252644 1406389 1402807 NC_000014.9 velvet.2142 99.92 True fake: not a misassembly (possible transposable element) 94933129 94936904 1410175 1406400 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = 35684812 59246168 59248306 1412324 1410186 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = 35625690 94874475 94875759 1412803 1414087 NC_000014.9 velvet.2142 99.92 True relocation, scaffold gap is present, inconsistency = -71952394 22923808 22925173 1414530 1415895 NC_000014.9 velvet.2142 99.85 True local misassembly 22918450 22921628 1415906 1419084 NC_000014.9 velvet.2142 99.94 True fake: scaffold gap size wrong estimation (local) 22927992 22930759 1419095 1421862 NC_000014.9 velvet.2142 99.89 True local misassembly 22925688 22927113 1421873 1423267 NC_000014.9 velvet.2142 97.81 True relocation, scaffold gap is present, inconsistency = 45523073 68450510 68455464 1423591 1428545 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = 21880962 90336437 90339130 1428556 1431249 NC_000014.9 velvet.2142 99.81 True relocation, scaffold gap is present, inconsistency = -19102830 71239162 71239694 1434111 1434643 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = 50234142 21003836 21005009 1435827 1434654 NC_000014.9 velvet.2142 99.83 True fake: scaffold gap size wrong estimation (local) 21000738 21003424 1439751 1437066 NC_000014.9 velvet.2142 99.93 True fake: scaffold gap size wrong estimation (local) 20997978 21000517 1443365 1440826 NC_000014.9 velvet.2142 99.88 True relocation, scaffold gap is present, inconsistency = -47473710 68468040 68471677 1447013 1443376 NC_000014.9 velvet.2142 99.95 True relocation, scaffold gap is present, inconsistency = 13131223 55332086 55336806 1451744 1447024 NC_000014.9 velvet.2142 99.96 True relocation, scaffold gap is present, inconsistency = -12262319 67593493 67594394 1452656 1451755 NC_000014.9 velvet.2142 99.78 True fake: scaffold gap size wrong estimation (local) 67587810 67590237 1455094 1452667 NC_000014.9 velvet.2142 99.92 True relocation, scaffold gap is present, inconsistency = 44635793 22951285 22952006 1455105 1455826 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = 29964321 52916338 52920338 1455837 1459870 NC_000014.9 velvet.2142 99.11 True relocation, scaffold gap is present, inconsistency = 31685900 84606467 84607492 1461124 1460099 NC_000014.9 velvet.2142 99.9 True relocation, scaffold gap is present, inconsistency = 7000347 77605264 77606109 1461135 1461980 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = 32667168 44937413 44938085 1462663 1461991 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = -30384156 75319780 75321388 1464448 1462844 NC_000014.9 velvet.2142 99.44 True relocation, scaffold gap is present, inconsistency = 6862860 68455739 68456896 1464472 1465629 NC_000014.9 velvet.2142 100.0 True inversion, scaffold gap is present 68447734 68450199 1468105 1465640 NC_000014.9 velvet.2142 99.96 True relocation, scaffold gap is present, inconsistency = 8564916 77015126 77015962 1468116 1468952 NC_000014.9 velvet.2142 99.76 True relocation, scaffold gap is present, inconsistency = 8546615 68465968 68468020 1471495 1469443 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 68462600 68465658 1475630 1472572 NC_000014.9 velvet.2142 99.93 True relocation, scaffold gap is present, inconsistency = 24316332 92782001 92783221 1475641 1476861 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = 20747469 72033493 72034385 1477900 1477008 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = -17734966 89767635 89768448 1478724 1477911 NC_000014.9 velvet.2142 99.75 True relocation, scaffold gap is present, inconsistency = -12161829 101924714 101929453 1483474 1478735 NC_000014.9 velvet.2142 99.98 True relocation, scaffold gap is present, inconsistency = 33014031 68908647 68910672 1485510 1483485 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = 11642 68888800 68896994 1493715 1485521 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = -33030887 101918628 101919676 1494774 1493726 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = 27515207 74401730 74403410 1496465 1494785 NC_000014.9 velvet.2142 99.88 True fake: scaffold gap size wrong estimation (local) 74397902 74398643 1498166 1497425 NC_000014.9 velvet.2142 99.87 True fake: scaffold gap size wrong estimation (local) 74392871 74393634 1499159 1498396 NC_000014.9 velvet.2142 99.87 True local misassembly 74393875 74397611 1502906 1499170 NC_000014.9 velvet.2142 99.97 True fake: scaffold gap size wrong estimation (local) 74391890 74392602 1505618 1504906 NC_000014.9 velvet.2142 100.0 True relocation, scaffold gap is present, inconsistency = 5963743 68426341 68428136 1507424 1505629 NC_000014.9 velvet.2142 99.94 True relocation, scaffold gap is present, inconsistency = -5955379 74368422 74369495 1520722 1519649 NC_000014.9 velvet.2142 98.98 True local misassembly 74367717 74368217 1521223 1520723 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 74363707 74365047 1526223 1524883 NC_000014.9 velvet.2142 99.85 True fake: scaffold gap size wrong estimation (local) 74361395 74363484 1529522 1527433 NC_000014.9 velvet.2142 99.95 True fake: scaffold gap size wrong estimation (local) 74341014 74341519 1544679 1544174 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 74339117 74339668 1547958 1547407 NC_000014.9 velvet.2142 100.0 True fake: scaffold gap size wrong estimation (local) 74337343 74338747 1549725 1548321 NC_000014.9 velvet.2142 99.22 True fake: scaffold gap size wrong estimation (local) 74334486 74334996 1554531 1554021 NC_000014.9 velvet.2142 99.8 True fake: scaffold gap size wrong estimation (local) 74331579 74332330 1557873 1557122 NC_000014.9 velvet.2142 99.87 True fake: scaffold gap size wrong estimation (local) 74327994 74328727 1561971 1561239 NC_000014.9 velvet.2142 99.86 True fake: scaffold gap size wrong estimation (local) 74325744 74327680 1566662 1564725 NC_000014.9 velvet.2142 99.9 True fake: scaffold gap size wrong estimation (local) 74324974 74325552 1567764 1567186 NC_000014.9 velvet.2142 99.83 True CONTIG velvet.2142 1574126 misassembled CONTIG velvet.2148 462 unaligned 74095431 74096126 4217 4912 NC_000014.9 velvet.2149 100.0 True local misassembly 74096444 74097440 4913 5909 NC_000014.9 velvet.2149 98.8 True fake: scaffold gap size wrong estimation (local) 74097638 74098297 6936 7595 NC_000014.9 velvet.2149 99.85 True fake: scaffold gap size wrong estimation (local) 74098847 74100619 8143 10309 NC_000014.9 velvet.2149 99.83 True fake: scaffold gap size wrong estimation (local) 74100861 74101476 10604 11219 NC_000014.9 velvet.2149 100.0 True fake: scaffold gap size wrong estimation (local) 74102248 74103269 12589 13610 NC_000014.9 velvet.2149 100.0 True fake: scaffold gap size wrong estimation (local) 74104198 74104812 15885 16557 NC_000014.9 velvet.2149 99.66 True CONTIG velvet.2149 16569 correct CONTIG velvet.2202 684 unaligned 19297586 19298462 1 877 NC_000014.9 velvet.2214 99.66 True CONTIG velvet.2214 880 correct 19298440 19299537 1098 1 NC_000014.9 velvet.2215 99.91 True CONTIG velvet.2215 1101 correct CONTIG velvet.2221 280 unaligned CONTIG velvet.2235 457 unaligned 103659234 103660225 1 992 NC_000014.9 velvet.2239 99.8 True CONTIG velvet.2239 992 correct CONTIG velvet.2245 212 unaligned 22921905 22923523 101 1719 NC_000014.9 velvet.2253 100.0 True CONTIG velvet.2253 1719 correct CONTIG velvet.2256 1223 unaligned CONTIG velvet.2267 359 unaligned 19434197 19434934 1242 505 NC_000014.9 velvet.2288 99.59 True CONTIG velvet.2288 1242 correct CONTIG velvet.2294 245 unaligned 90525986 90526576 1 591 NC_000014.9 velvet.2295 100.0 True CONTIG velvet.2295 791 correct CONTIG velvet.2299 452 unaligned CONTIG velvet.2302 255 unaligned CONTIG velvet.2303 473 unaligned 18341270 18343818 2549 1 NC_000014.9 velvet.2307 99.88 True CONTIG velvet.2307 2549 correct CONTIG velvet.2310 230 unaligned 19427250 19430061 1 2812 NC_000014.9 velvet.2313 99.86 True CONTIG velvet.2313 2812 correct CONTIG velvet.2326 251 unaligned 22959069 22960379 1311 1 NC_000014.9 velvet.2334 100.0 True CONTIG velvet.2334 1504 correct CONTIG velvet.2348 477 unaligned CONTIG velvet.2358 236 unaligned 75799102 75799701 1 600 NC_000014.9 velvet.2367 99.83 True CONTIG velvet.2367 600 correct CONTIG velvet.2374 350 unaligned 19162748 19163640 1 893 NC_000014.9 velvet.2383 99.89 True CONTIG velvet.2383 893 correct CONTIG velvet.2384 213 unaligned CONTIG velvet.2385 3702 unaligned CONTIG velvet.2395 264 unaligned CONTIG velvet.2401 321 unaligned 106065984 106066510 126 648 NC_000014.9 velvet.2425 98.86 True unknown 106069126 106069757 3601 4235 NC_000014.9 velvet.2425 97.64 True unknown CONTIG velvet.2425 37551 mis_unaligned CONTIG velvet.2426 347 unaligned CONTIG velvet.2435 228 unaligned CONTIG velvet.2465 266 unaligned CONTIG velvet.2476 246 unaligned CONTIG velvet.2499 236 unaligned 24005583 24007051 1469 1 NC_000014.9 velvet.2516 99.86 True CONTIG velvet.2516 1469 correct CONTIG velvet.2529 232 unaligned CONTIG velvet.2552 208 unaligned CONTIG velvet.2556 279 unaligned CONTIG velvet.2566 465 unaligned 18612327 18614784 1 2458 NC_000014.9 velvet.2573 99.92 True CONTIG velvet.2573 2458 correct 19651311 19652306 996 1 NC_000014.9 velvet.2577 99.3 True CONTIG velvet.2577 996 correct CONTIG velvet.2598 217 unaligned CONTIG velvet.2602 335 unaligned 20945312 20946797 1 1486 NC_000014.9 velvet.2608 99.73 True CONTIG velvet.2608 1486 correct 18977269 18980330 1 3062 NC_000014.9 velvet.2612 99.84 True CONTIG velvet.2612 3062 correct 71956773 71957829 1 1057 NC_000014.9 velvet.2623 99.81 True CONTIG velvet.2623 1057 correct CONTIG velvet.2643 301 unaligned 19290740 19291336 597 1 NC_000014.9 velvet.2645 99.83 True CONTIG velvet.2645 597 correct CONTIG velvet.2650 240 unaligned 74399118 74401728 1 2611 NC_000014.9 velvet.2654 100.0 True CONTIG velvet.2654 2611 correct CONTIG velvet.2672 416 unaligned 64237226 64237837 1 612 NC_000014.9 velvet.2673 100.0 True CONTIG velvet.2673 618 correct 67671505 67672136 15 646 NC_000014.9 velvet.2683 100.0 True CONTIG velvet.2683 646 correct 104824549 104825469 1 921 NC_000014.9 velvet.2686 100.0 True CONTIG velvet.2686 921 correct 106594787 106595600 202 1021 NC_000014.9 velvet.2697 98.29 True CONTIG velvet.2697 1021 correct CONTIG velvet.2698 264 unaligned CONTIG velvet.2699 241 unaligned CONTIG velvet.2727 343 unaligned CONTIG velvet.2732 391 unaligned 73552178 73552867 1 690 NC_000014.9 velvet.2734 99.71 True CONTIG velvet.2734 690 correct CONTIG velvet.2735 375 unaligned 34560835 34563305 1 2471 NC_000014.9 velvet.2772 100.0 True fake: scaffold gap size wrong estimation (local) 34567435 34568161 8564 9290 NC_000014.9 velvet.2772 99.86 True fake: scaffold gap size wrong estimation (local) 34568494 34569535 12910 13998 NC_000014.9 velvet.2772 99.9 True CONTIG velvet.2772 17260 correct 82137577 82140498 1 2922 NC_000014.9 velvet.2773 99.97 True CONTIG velvet.2773 2922 correct 19035265 19036068 804 1 NC_000014.9 velvet.2791 99.75 True CONTIG velvet.2791 804 correct CONTIG velvet.2800 303 unaligned CONTIG velvet.2802 348 unaligned CONTIG velvet.2824 481 unaligned 19370735 19372305 1 1571 NC_000014.9 velvet.2861 99.81 True CONTIG velvet.2861 1571 correct CONTIG velvet.2863 449 unaligned CONTIG velvet.2881 206 unaligned 18476687 18477388 36791 36090 NC_000014.9 velvet.2884 100.0 True unknown 18529551 18530065 77558 77044 NC_000014.9 velvet.2884 99.81 True unknown 18520123 18520637 88544 88040 NC_000014.9 velvet.2884 98.02 True unknown 18453576 18454095 181334 180824 NC_000014.9 velvet.2884 98.08 True unknown 18451311 18451861 182035 181493 NC_000014.9 velvet.2884 98.19 True unknown CONTIG velvet.2884 182035 mis_unaligned CONTIG velvet.2885 229 unaligned 18996763 18998408 1 1646 NC_000014.9 velvet.2929 99.82 True CONTIG velvet.2929 1646 correct CONTIG velvet.2949 291 unaligned CONTIG velvet.2951 246 unaligned CONTIG velvet.2955 405 unaligned CONTIG velvet.2961 217 unaligned CONTIG velvet.2968 231 unaligned 19113761 19114810 1050 1 NC_000014.9 velvet.2978 99.81 True CONTIG velvet.2978 1050 correct 65817903 65818846 1 944 NC_000014.9 velvet.2994 99.68 True CONTIG velvet.2994 944 correct CONTIG velvet.3006 224 unaligned 18868371 18869513 1143 1 NC_000014.9 velvet.3014 100.0 True CONTIG velvet.3014 1143 correct 66407826 66409199 1 1374 NC_000014.9 velvet.3016 100.0 True CONTIG velvet.3016 1374 correct CONTIG velvet.3046 228 unaligned CONTIG velvet.3059 255 unaligned 19182509 19183530 1022 1 NC_000014.9 velvet.3060 99.8 True CONTIG velvet.3060 1022 correct 18339725 18341207 1483 1 NC_000014.9 velvet.3070 100.0 True CONTIG velvet.3070 1483 correct CONTIG velvet.3071 217 unaligned 19372775 19373390 616 1 NC_000014.9 velvet.3077 98.54 True CONTIG velvet.3077 616 correct CONTIG velvet.3079 272 unaligned CONTIG velvet.3088 224 unaligned CONTIG velvet.3103 368 unaligned 43567431 43570530 4475 903 NC_000014.9 velvet.3109 99.97 True fake: scaffold gap size wrong estimation (local) 43566505 43567153 5675 5027 NC_000014.9 velvet.3109 100.0 True fake: scaffold gap size wrong estimation (local) 43562288 43564010 10293 8571 NC_000014.9 velvet.3109 100.0 True CONTIG velvet.3109 10293 correct CONTIG velvet.3123 300 unaligned 18967762 18968566 1 805 NC_000014.9 velvet.3127 99.88 True CONTIG velvet.3127 805 correct CONTIG velvet.3129 220 unaligned CONTIG velvet.3138 441 unaligned 48408591 48409511 891 1811 NC_000014.9 velvet.3139 99.89 True CONTIG velvet.3139 1811 correct CONTIG velvet.3147 216 unaligned 77926665 77928495 1 1831 NC_000014.9 velvet.3148 99.95 True CONTIG velvet.3148 1831 correct 77450049 77450649 1 601 NC_000014.9 velvet.3194 99.83 True CONTIG velvet.3194 601 correct 19668406 19669422 1 1016 NC_000014.9 velvet.3195 99.51 True CONTIG velvet.3195 1016 correct CONTIG velvet.3204 471 unaligned CONTIG velvet.3205 358 unaligned CONTIG velvet.3212 219 unaligned CONTIG velvet.3234 466 unaligned CONTIG velvet.3235 408 unaligned 18998471 19002989 1 4519 NC_000014.9 velvet.3240 99.69 True CONTIG velvet.3240 4519 correct 91646204 91646969 1 766 NC_000014.9 velvet.3259 99.61 True CONTIG velvet.3259 766 correct CONTIG velvet.3265 390 unaligned 76062949 76067312 997 5360 NC_000014.9 velvet.3266 99.84 True CONTIG velvet.3266 5360 correct 34555506 34556192 1 687 NC_000014.9 velvet.3274 99.71 True CONTIG velvet.3274 732 correct 19046459 19048580 2120 1 NC_000014.9 velvet.3289 99.81 True CONTIG velvet.3289 2120 correct CONTIG velvet.3319 447 unaligned CONTIG velvet.3322 207 unaligned CONTIG velvet.3332 445 unaligned CONTIG velvet.3334 3682 unaligned CONTIG velvet.3336 355 unaligned CONTIG velvet.3337 381 unaligned 69838791 69839776 1 1004 NC_000014.9 velvet.3340 98.21 True CONTIG velvet.3340 1004 correct CONTIG velvet.3360 215 unaligned 29966057 29966711 1 655 NC_000014.9 velvet.3375 100.0 True CONTIG velvet.3375 655 correct CONTIG velvet.3381 461 unaligned CONTIG velvet.3395 315 unaligned CONTIG velvet.3403 325 unaligned CONTIG velvet.3406 295 unaligned 23331104 23332114 740 1750 NC_000014.9 velvet.3418 100.0 True fake: scaffold gap size wrong estimation (local) 23333269 23333799 4082 4612 NC_000014.9 velvet.3418 100.0 True local misassembly 23334040 23334821 4613 5394 NC_000014.9 velvet.3418 98.72 True indel: indel (<= 5bp) 23334822 23335324 5399 5901 NC_000014.9 velvet.3418 98.81 True fake: scaffold gap size wrong estimation (local) 23336522 23337084 6732 7294 NC_000014.9 velvet.3418 98.4 True fake: scaffold gap size wrong estimation (local) 23363965 23374741 31487 42353 NC_000014.9 velvet.3418 99.99 True fake: scaffold gap size wrong estimation (extensive) 23389115 23390062 48865 49812 NC_000014.9 velvet.3418 100.0 True fake: not a misassembly (possible transposable element) 23417358 23419820 49823 52285 NC_000014.9 velvet.3418 99.56 True fake: not a misassembly (possible transposable element) 23390033 23392977 52286 55229 NC_000014.9 velvet.3418 99.97 True fake: not a misassembly (possible transposable element) 23384711 23386320 56849 55240 NC_000014.9 velvet.3418 99.88 True fake: not a misassembly (possible transposable element) 23393043 23394900 56860 58722 NC_000014.9 velvet.3418 99.95 True fake: scaffold gap size wrong estimation (local) 23396141 23397943 61022 62824 NC_000014.9 velvet.3418 99.94 True fake: scaffold gap size wrong estimation (local) 23401310 23413350 67059 79095 NC_000014.9 velvet.3418 99.93 True relocation, scaffold gap is present, inconsistency = 43133 23342144 23343860 95128 93412 NC_000014.9 velvet.3418 99.88 True relocation, scaffold gap is present, inconsistency = -21102 23355169 23362898 103205 95476 NC_000014.9 velvet.3418 100.0 True fake: scaffold gap size wrong estimation (local) 23344120 23350020 109116 103216 NC_000014.9 velvet.3418 99.92 True relocation, scaffold gap is present, inconsistency = 79670 23429701 23439972 109127 119476 NC_000014.9 velvet.3418 99.9 True relocation, scaffold gap is present, inconsistency = -23658 23416325 23417357 119487 120519 NC_000014.9 velvet.3418 99.42 True fake: scaffold gap size wrong estimation (local) 23423496 23428851 120683 126038 NC_000014.9 velvet.3418 99.87 True fake: scaffold gap size wrong estimation (local) 23428886 23429421 127017 127552 NC_000014.9 velvet.3418 99.81 True relocation, scaffold gap is present, inconsistency = 76201 23327858 23328983 152379 151254 NC_000014.9 velvet.3418 98.85 True local misassembly 23327112 23327630 152898 152380 NC_000014.9 velvet.3418 99.81 True fake: scaffold gap size wrong estimation (local) 23321561 23325977 159368 154708 NC_000014.9 velvet.3418 99.91 True fake: scaffold gap size wrong estimation (local) 23319291 23321463 162526 160353 NC_000014.9 velvet.3418 99.82 True fake: scaffold gap size wrong estimation (local) 23318490 23319188 164368 163672 NC_000014.9 velvet.3418 99.57 True relocation, scaffold gap is present, inconsistency = -76381752 99692807 99694275 171803 170335 NC_000014.9 velvet.3418 99.93 True fake: scaffold gap size wrong estimation (local) 99685319 99692346 180045 173025 NC_000014.9 velvet.3418 99.79 True fake: scaffold gap size wrong estimation (local) 99682409 99684089 183884 182156 NC_000014.9 velvet.3418 99.76 True relocation, scaffold gap is present, inconsistency = 76388468 23292942 23293930 184883 183895 NC_000014.9 velvet.3418 100.0 True relocation, scaffold gap is present, inconsistency = -12399 23299928 23303046 190296 187178 NC_000014.9 velvet.3418 99.94 True fake: scaffold gap size wrong estimation (local) 23296582 23298971 194496 192107 NC_000014.9 velvet.3418 99.87 True fake: scaffold gap size wrong estimation (local) 23295055 23296386 196694 195321 NC_000014.9 velvet.3418 100.0 True relocation, scaffold gap is present, inconsistency = -76378054 99670369 99671757 199434 198046 NC_000014.9 velvet.3418 99.93 True fake: scaffold gap size wrong estimation (local) 99667322 99669643 203148 200827 NC_000014.9 velvet.3418 99.96 True relocation, scaffold gap is present, inconsistency = 76454850 23211260 23211765 203855 204360 NC_000014.9 velvet.3418 100.0 True fake: scaffold gap size wrong estimation (local) 23213380 23214254 207093 207966 NC_000014.9 velvet.3418 99.89 True fake: scaffold gap size wrong estimation (local) 23215321 23215983 211132 211794 NC_000014.9 velvet.3418 100.0 True fake: scaffold gap size wrong estimation (local) 23217296 23217856 214237 214797 NC_000014.9 velvet.3418 100.0 True fake: scaffold gap size wrong estimation (local) 23218576 23219506 215074 216004 NC_000014.9 velvet.3418 99.89 True relocation, scaffold gap is present, inconsistency = -7487 23212030 23212589 216015 216574 NC_000014.9 velvet.3418 100.0 True fake: scaffold gap size wrong estimation (local) 23214677 23215271 219400 219994 NC_000014.9 velvet.3418 99.83 True fake: scaffold gap size wrong estimation (local) 23249430 23250232 251544 252346 NC_000014.9 velvet.3418 99.88 True local misassembly 23246248 23246883 252825 253460 NC_000014.9 velvet.3418 99.37 True relocation, scaffold gap is present, inconsistency = 76365718 99613859 99619192 254718 260016 NC_000014.9 velvet.3418 98.0 True fake: scaffold gap size wrong estimation (extensive) 99628620 99629521 260027 260928 NC_000014.9 velvet.3418 99.89 True fake: scaffold gap size wrong estimation (local) 99629805 99631073 261346 262614 NC_000014.9 velvet.3418 99.84 True relocation, scaffold gap is present, inconsistency = -11590 99619494 99621160 262625 264291 NC_000014.9 velvet.3418 99.94 True fake: scaffold gap size wrong estimation (local) 99622017 99628331 265660 272166 NC_000014.9 velvet.3418 97.66 True fake: scaffold gap size wrong estimation (local) 99631778 99636788 272177 277248 NC_000014.9 velvet.3418 99.78 True fake: scaffold gap size wrong estimation (local) 99637585 99639587 278816 280844 NC_000014.9 velvet.3418 98.62 True fake: scaffold gap size wrong estimation (local) 99646869 99653346 284469 292018 NC_000014.9 velvet.3418 99.27 True fake: scaffold gap size wrong estimation (extensive) 99663492 99664899 293103 294510 NC_000014.9 velvet.3418 99.93 True fake: scaffold gap size wrong estimation (local) 99666079 99667333 296392 297646 NC_000014.9 velvet.3418 99.76 True relocation, scaffold gap is present, inconsistency = -72918 99595495 99603319 298726 306551 NC_000014.9 velvet.3418 99.74 True fake: scaffold gap size wrong estimation (local) 99604225 99607045 308254 311074 NC_000014.9 velvet.3418 99.89 True fake: scaffold gap size wrong estimation (local) 99607181 99610506 311423 314749 NC_000014.9 velvet.3418 99.49 True fake: scaffold gap size wrong estimation (local) 99611774 99613365 316868 318459 NC_000014.9 velvet.3418 99.94 True fake: scaffold gap size wrong estimation (local) 99644849 99646530 343586 345267 NC_000014.9 velvet.3418 99.88 True local misassembly 99643341 99644787 347786 349232 NC_000014.9 velvet.3418 99.86 True fake: scaffold gap size wrong estimation (extensive) 99654224 99656520 350815 353063 NC_000014.9 velvet.3418 97.86 True fake: scaffold gap size wrong estimation (local) 99656905 99659383 354315 356797 NC_000014.9 velvet.3418 99.8 True fake: scaffold gap size wrong estimation (local) 99659889 99661505 358110 359731 NC_000014.9 velvet.3418 99.45 True relocation, scaffold gap is present, inconsistency = -76393783 23267745 23269047 359754 361030 NC_000014.9 velvet.3418 98.0 True fake: scaffold gap size wrong estimation (local) 23269743 23271203 362616 364076 NC_000014.9 velvet.3418 99.93 True fake: scaffold gap size wrong estimation (local) 23271533 23272160 364539 365166 NC_000014.9 velvet.3418 100.0 True fake: scaffold gap size wrong estimation (local) 23272429 23274656 366080 368307 NC_000014.9 velvet.3418 100.0 True fake: scaffold gap size wrong estimation (local) 23274938 23277400 369370 371829 NC_000014.9 velvet.3418 99.84 True relocation, scaffold gap is present, inconsistency = -47179 23234065 23234967 375673 376575 NC_000014.9 velvet.3418 100.0 True local misassembly 23235266 23236258 376576 377568 NC_000014.9 velvet.3418 98.99 True fake: scaffold gap size wrong estimation (local) 23237420 23238490 379696 380766 NC_000014.9 velvet.3418 98.97 True fake: scaffold gap size wrong estimation (local) 23240067 23241489 383127 384549 NC_000014.9 velvet.3418 100.0 True fake: scaffold gap size wrong estimation (local) 23242139 23243448 385695 387189 NC_000014.9 velvet.3418 99.84 True fake: scaffold gap size wrong estimation (local) 23244070 23246147 388290 390367 NC_000014.9 velvet.3418 99.95 True fake: scaffold gap size wrong estimation (local) 23251845 23254271 391435 393839 NC_000014.9 velvet.3418 98.92 True fake: scaffold gap size wrong estimation (local) 23254392 23256402 395023 397032 NC_000014.9 velvet.3418 99.9 True fake: scaffold gap size wrong estimation (local) 23257274 23258067 398789 399582 NC_000014.9 velvet.3418 100.0 True fake: scaffold gap size wrong estimation (local) 23258295 23258930 399930 400606 NC_000014.9 velvet.3418 99.19 True fake: scaffold gap size wrong estimation (local) 23259485 23261195 402441 404151 NC_000014.9 velvet.3418 99.94 True fake: scaffold gap size wrong estimation (local) 23262039 23263102 407280 408343 NC_000014.9 velvet.3418 100.0 True fake: scaffold gap size wrong estimation (local) 23264020 23264832 410583 411395 NC_000014.9 velvet.3418 100.0 True local misassembly 23265112 23266015 411396 412299 NC_000014.9 velvet.3418 98.67 True fake: scaffold gap size wrong estimation (extensive) 23279785 23280731 416894 417840 NC_000014.9 velvet.3418 99.68 True fake: scaffold gap size wrong estimation (local) 23291707 23292314 423434 424041 NC_000014.9 velvet.3418 99.67 True fake: scaffold gap size wrong estimation (extensive) 23304076 23305484 443697 445105 NC_000014.9 velvet.3418 100.0 True fake: scaffold gap size wrong estimation (local) 23305759 23312213 446064 452518 NC_000014.9 velvet.3418 99.92 True fake: scaffold gap size wrong estimation (local) 23312372 23313733 453303 454664 NC_000014.9 velvet.3418 99.71 True fake: scaffold gap size wrong estimation (local) 23314406 23315914 456230 457738 NC_000014.9 velvet.3418 100.0 True fake: scaffold gap size wrong estimation (extensive) 23337461 23338982 472111 473632 NC_000014.9 velvet.3418 99.93 True local misassembly 23339217 23339985 473633 474401 NC_000014.9 velvet.3418 98.7 True indel: indel (> 5bp) 23340215 23341580 474658 476023 NC_000014.9 velvet.3418 99.49 True CONTIG velvet.3418 476023 misassembled CONTIG velvet.3426 206 unaligned CONTIG velvet.3431 203 unaligned 24049241 24049871 1 631 NC_000014.9 velvet.3442 99.37 True CONTIG velvet.3442 631 correct 76055348 76056105 1 758 NC_000014.9 velvet.3451 99.74 True CONTIG velvet.3451 758 correct CONTIG velvet.3480 338 unaligned 70456873 70459457 2586 1 NC_000014.9 velvet.3490 99.19 True CONTIG velvet.3490 2586 correct CONTIG velvet.3503 339 unaligned 18348497 18349779 1 1283 NC_000014.9 velvet.3520 99.77 True CONTIG velvet.3520 1283 correct CONTIG velvet.3576 246 unaligned 100355492 100356395 908 5 NC_000014.9 velvet.3591 99.67 True fake: scaffold gap size wrong estimation (local) 100353518 100355221 3709 2006 NC_000014.9 velvet.3591 99.82 True fake: scaffold gap size wrong estimation (local) 100352390 100353254 4911 4047 NC_000014.9 velvet.3591 99.88 True fake: scaffold gap size wrong estimation (local) 100317164 100317876 34414 33702 NC_000014.9 velvet.3591 98.6 True local misassembly 100315881 100316621 35155 34415 NC_000014.9 velvet.3591 99.87 True local misassembly 100318010 100318746 35902 35166 NC_000014.9 velvet.3591 100.0 True fake: scaffold gap size wrong estimation (local) 100312600 100315595 39872 36739 NC_000014.9 velvet.3591 99.83 True relocation, scaffold gap is present, inconsistency = -14107 100324498 100326696 42081 39883 NC_000014.9 velvet.3591 99.91 True fake: scaffold gap size wrong estimation (local) 100321122 100324228 46271 43165 NC_000014.9 velvet.3591 99.97 True fake: scaffold gap size wrong estimation (local) 100319881 100320871 48238 47248 NC_000014.9 velvet.3591 100.0 True fake: scaffold gap size wrong estimation (local) 100318987 100319611 49327 48703 NC_000014.9 velvet.3591 100.0 True fake: scaffold gap size wrong estimation (local) 100302616 100310264 67647 60240 NC_000014.9 velvet.3591 96.23 True fake: scaffold gap size wrong estimation (local) 100283751 100284755 91525 90514 NC_000014.9 velvet.3591 100.0 True fake: scaffold gap size wrong estimation (local) 100281063 100283483 94899 92377 NC_000014.9 velvet.3591 99.92 True fake: scaffold gap size wrong estimation (local) 100273627 100280950 102477 95154 NC_000014.9 velvet.3591 99.95 True CONTIG velvet.3591 103621 misassembled CONTIG velvet.3593 211 unaligned 19304337 19305123 1 787 NC_000014.9 velvet.3603 99.87 True CONTIG velvet.3603 787 correct 19666199 19667410 1212 1 NC_000014.9 velvet.3617 99.26 True CONTIG velvet.3617 1212 correct CONTIG velvet.3627 255 unaligned CONTIG velvet.3649 373 unaligned 19785257 19785960 1 704 NC_000014.9 velvet.3653 99.86 True CONTIG velvet.3653 704 correct 72096246 72099215 1 2970 NC_000014.9 velvet.3657 99.9 True CONTIG velvet.3657 2970 correct CONTIG velvet.3658 3898 unaligned 73256900 73257768 853 1 NC_000014.9 velvet.3668 98.02 True CONTIG velvet.3668 853 correct 19251949 19257409 1 5459 NC_000014.9 velvet.3686 99.76 True CONTIG velvet.3686 5459 correct CONTIG velvet.3690 472 unaligned 19084861 19085885 1 1025 NC_000014.9 velvet.3702 99.9 True CONTIG velvet.3702 1025 correct CONTIG velvet.3705 214 unaligned CONTIG velvet.3710 204 unaligned CONTIG velvet.3711 255 unaligned CONTIG velvet.3717 432 unaligned 58989666 58990807 2898 855 NC_000014.9 velvet.3722 99.91 True fake: scaffold gap size wrong estimation (local) 58987651 58989480 4728 2909 NC_000014.9 velvet.3722 99.4 True fake: scaffold gap size wrong estimation (local) 58983787 58987330 9778 5715 NC_000014.9 velvet.3722 99.89 True fake: scaffold gap size wrong estimation (local) 58982607 58983490 11506 10623 NC_000014.9 velvet.3722 99.21 True fake: scaffold gap size wrong estimation (local) 58940920 58955447 48873 33570 NC_000014.9 velvet.3722 99.88 True fake: scaffold gap size wrong estimation (local) 58937201 58940684 53373 49839 NC_000014.9 velvet.3722 97.97 True fake: scaffold gap size wrong estimation (local) 58890936 58901601 93294 82620 NC_000014.9 velvet.3722 99.83 True fake: scaffold gap size wrong estimation (local) 58889636 58890636 95143 94143 NC_000014.9 velvet.3722 99.6 True relocation, scaffold gap is present, inconsistency = 28956871 29931804 29932558 96104 95350 NC_000014.9 velvet.3722 100.0 True local misassembly 29929203 29931431 98333 96105 NC_000014.9 velvet.3722 99.96 True relocation, scaffold gap is present, inconsistency = 31669933 61601710 61603563 98679 100532 NC_000014.9 velvet.3722 99.73 True fake: scaffold gap size wrong estimation (local) 61603812 61607143 101680 105011 NC_000014.9 velvet.3722 99.97 True relocation, scaffold gap is present, inconsistency = 2714633 58875664 58889168 119346 105022 NC_000014.9 velvet.3722 99.34 True fake: scaffold gap size wrong estimation (local) 58874435 58875046 120959 120348 NC_000014.9 velvet.3722 99.84 True fake: scaffold gap size wrong estimation (local) 58870591 58874306 125308 121593 NC_000014.9 velvet.3722 99.65 True fake: scaffold gap size wrong estimation (local) 58867719 58870043 129043 126636 NC_000014.9 velvet.3722 95.15 True fake: scaffold gap size wrong estimation (local) 58854571 58867619 142977 129881 NC_000014.9 velvet.3722 99.41 True fake: scaffold gap size wrong estimation (extensive) 58817570 58821967 172769 168372 NC_000014.9 velvet.3722 99.91 True fake: scaffold gap size wrong estimation (local) 58813443 58817276 177683 173850 NC_000014.9 velvet.3722 99.87 True relocation, scaffold gap is present, inconsistency = 39613741 98431048 98434467 177714 181133 NC_000014.9 velvet.3722 99.82 True relocation, scaffold gap is present, inconsistency = 39588357 58839540 58842680 184284 181144 NC_000014.9 velvet.3722 99.84 True fake: scaffold gap size wrong estimation (local) 58838615 58839462 185575 184736 NC_000014.9 velvet.3722 98.58 True fake: scaffold gap size wrong estimation (local) 58836308 58838383 188579 186504 NC_000014.9 velvet.3722 99.95 True fake: scaffold gap size wrong estimation (local) 58835161 58836007 190138 189292 NC_000014.9 velvet.3722 100.0 True fake: not a misassembly (possible transposable element) 58822567 58823802 191384 190149 NC_000014.9 velvet.3722 99.6 True fake: not a misassembly (possible transposable element) 58826420 58831259 196401 191562 NC_000014.9 velvet.3722 99.96 True fake: scaffold gap size wrong estimation (local) 58825641 58826138 197724 197225 NC_000014.9 velvet.3722 99.6 True fake: scaffold gap size wrong estimation (local) 58824063 58825250 199429 198242 NC_000014.9 velvet.3722 100.0 True fake: scaffold gap size wrong estimation (local) 58803196 58804473 216573 215297 NC_000014.9 velvet.3722 99.22 True fake: scaffold gap size wrong estimation (local) 58800115 58801827 220773 219073 NC_000014.9 velvet.3722 98.95 True fake: scaffold gap size wrong estimation (local) 58797834 58799623 223985 222196 NC_000014.9 velvet.3722 99.94 True relocation, scaffold gap is present, inconsistency = 4803426 63603060 63604229 223996 225165 NC_000014.9 velvet.3722 100.0 True local misassembly 63604377 63605014 225166 225803 NC_000014.9 velvet.3722 98.43 True fake: scaffold gap size wrong estimation (local) 63612642 63613533 230175 231066 NC_000014.9 velvet.3722 100.0 True local misassembly 63608166 63608929 231077 231836 NC_000014.9 velvet.3722 99.48 True fake: scaffold gap size wrong estimation (local) 63613949 63615683 232018 233792 NC_000014.9 velvet.3722 100.0 True fake: scaffold gap size wrong estimation (local) 63616061 63617023 235004 235966 NC_000014.9 velvet.3722 100.0 True fake: scaffold gap size wrong estimation (local) 63617656 63618296 236329 236969 NC_000014.9 velvet.3722 99.69 True fake: scaffold gap size wrong estimation (extensive) 63635458 63635964 261892 262404 NC_000014.9 velvet.3722 99.4 True fake: scaffold gap size wrong estimation (local) 63638239 63639302 265293 266356 NC_000014.9 velvet.3722 100.0 True fake: scaffold gap size wrong estimation (local) 63639386 63640544 266482 267657 NC_000014.9 velvet.3722 96.35 True fake: scaffold gap size wrong estimation (local) 63641137 63643528 269230 271621 NC_000014.9 velvet.3722 100.0 True fake: scaffold gap size wrong estimation (local) 63645571 63646376 274102 274907 NC_000014.9 velvet.3722 98.76 True relocation, scaffold gap is present, inconsistency = 10447716 53195711 53197844 277051 274918 NC_000014.9 velvet.3722 99.91 True fake: scaffold gap size wrong estimation (local) 53194222 53195019 279159 278398 NC_000014.9 velvet.3722 95.24 True relocation, scaffold gap is present, inconsistency = 10450694 63646700 63648410 280146 281810 NC_000014.9 velvet.3722 97.24 True fake: scaffold gap size wrong estimation (local) 63649621 63651000 283939 285318 NC_000014.9 velvet.3722 99.28 True fake: scaffold gap size wrong estimation (local) 63652240 63652932 287448 288140 NC_000014.9 velvet.3722 100.0 True fake: scaffold gap size wrong estimation (local) 63654952 63655528 291150 291726 NC_000014.9 velvet.3722 98.27 True fake: scaffold gap size wrong estimation (local) 63656107 63657499 293746 295138 NC_000014.9 velvet.3722 100.0 True fake: scaffold gap size wrong estimation (local) 63659543 63660135 298029 298621 NC_000014.9 velvet.3722 100.0 True fake: scaffold gap size wrong estimation (local) 63660421 63661280 298811 299670 NC_000014.9 velvet.3722 100.0 True fake: scaffold gap size wrong estimation (local) 63662269 63666781 301539 306332 NC_000014.9 velvet.3722 99.98 True fake: scaffold gap size wrong estimation (local) 63668019 63669412 308377 309770 NC_000014.9 velvet.3722 100.0 True fake: scaffold gap size wrong estimation (local) 63669633 63671176 310229 311819 NC_000014.9 velvet.3722 100.0 True fake: scaffold gap size wrong estimation (local) 63671413 63673298 312825 314710 NC_000014.9 velvet.3722 100.0 True fake: scaffold gap size wrong estimation (local) 63673406 63674196 314865 315647 NC_000014.9 velvet.3722 98.99 True fake: scaffold gap size wrong estimation (local) 63674550 63675315 316811 317576 NC_000014.9 velvet.3722 98.56 True fake: scaffold gap size wrong estimation (local) 63675568 63676565 317817 318814 NC_000014.9 velvet.3722 100.0 True indel: indel (> 5bp) 63676718 63677662 318994 319938 NC_000014.9 velvet.3722 100.0 True local misassembly 63677934 63678904 319939 320909 NC_000014.9 velvet.3722 98.97 True relocation, scaffold gap is present, inconsistency = 10508822 53158579 53159185 331418 330836 NC_000014.9 velvet.3722 95.98 True relocation, scaffold gap is present, inconsistency = 10519776 63680233 63682837 332690 335292 NC_000014.9 velvet.3722 99.88 True fake: scaffold gap size wrong estimation (local) 63683079 63687248 336375 340544 NC_000014.9 velvet.3722 100.0 True fake: scaffold gap size wrong estimation (local) 63687309 63687867 340659 341504 NC_000014.9 velvet.3722 100.0 True fake: scaffold gap size wrong estimation (local) 63690138 63690809 344366 345037 NC_000014.9 velvet.3722 100.0 True fake: scaffold gap size wrong estimation (local) 63691015 63691966 345501 346452 NC_000014.9 velvet.3722 100.0 True fake: scaffold gap size wrong estimation (local) 63693667 63694237 348861 349431 NC_000014.9 velvet.3722 98.25 True indel: indel (> 5bp) 63694307 63695075 349432 350200 NC_000014.9 velvet.3722 98.7 True fake: scaffold gap size wrong estimation (local) 63697000 63701015 352943 356955 NC_000014.9 velvet.3722 99.93 True fake: scaffold gap size wrong estimation (local) 63701125 63701933 358036 358844 NC_000014.9 velvet.3722 100.0 True indel: indel (> 5bp) 63701970 63702544 358845 359419 NC_000014.9 velvet.3722 98.26 True local misassembly 63702680 63703400 359420 360140 NC_000014.9 velvet.3722 98.61 True fake: scaffold gap size wrong estimation (local) 63704072 63704886 361680 362494 NC_000014.9 velvet.3722 99.88 True fake: scaffold gap size wrong estimation (local) 63705595 63706844 365169 366418 NC_000014.9 velvet.3722 100.0 True fake: scaffold gap size wrong estimation (local) 63709406 63711028 369360 370982 NC_000014.9 velvet.3722 100.0 True local misassembly 63711308 63711817 370983 371492 NC_000014.9 velvet.3722 98.04 True fake: scaffold gap size wrong estimation (local) 63712062 63712662 372939 373539 NC_000014.9 velvet.3722 100.0 True local misassembly 63712929 63713558 373540 374169 NC_000014.9 velvet.3722 96.67 True indel: indel (> 5bp) 63713559 63714538 374179 375158 NC_000014.9 velvet.3722 99.9 True fake: scaffold gap size wrong estimation (local) 63718269 63718981 380502 381214 NC_000014.9 velvet.3722 98.6 True local misassembly 63719297 63719856 381215 381774 NC_000014.9 velvet.3722 98.21 True fake: scaffold gap size wrong estimation (local) 63721477 63722271 384530 385324 NC_000014.9 velvet.3722 100.0 True CONTIG velvet.3722 385324 misassembled CONTIG velvet.3730 248 unaligned CONTIG velvet.3748 401 unaligned CONTIG velvet.3755 257 unaligned CONTIG velvet.3759 206 unaligned 18622197 18624710 2514 1 NC_000014.9 velvet.3766 99.76 True CONTIG velvet.3766 2514 correct CONTIG velvet.3771 222 unaligned 59550935 59551567 1 633 NC_000014.9 velvet.3791 100.0 True CONTIG velvet.3791 767 correct 19678385 19679797 1413 1 NC_000014.9 velvet.3796 99.93 True CONTIG velvet.3796 1413 correct CONTIG velvet.3810 227 unaligned 19061661 19062391 731 1 NC_000014.9 velvet.3813 99.86 True CONTIG velvet.3813 732 correct 19417068 19418130 1 1063 NC_000014.9 velvet.3821 99.81 True CONTIG velvet.3821 1063 correct 94952850 94953488 639 1 NC_000014.9 velvet.3822 99.69 True CONTIG velvet.3822 639 correct 70250883 70251538 656 1 NC_000014.9 velvet.3825 99.24 True fake: scaffold gap size wrong estimation (local) 70245144 70246368 8183 7002 NC_000014.9 velvet.3825 96.05 True CONTIG velvet.3825 8183 correct CONTIG velvet.3843 336 unaligned CONTIG velvet.3850 253 unaligned CONTIG velvet.3862 611 unaligned 19044467 19045722 1 1256 NC_000014.9 velvet.3867 100.0 True CONTIG velvet.3867 1256 correct 18624715 18625878 1 1164 NC_000014.9 velvet.3917 99.91 True CONTIG velvet.3917 1164 correct CONTIG velvet.3921 454 unaligned 52625826 52627600 1 1775 NC_000014.9 velvet.3926 99.94 True fake: scaffold gap size wrong estimation (local) 52627853 52628540 2371 3058 NC_000014.9 velvet.3926 100.0 True fake: scaffold gap size wrong estimation (local) 52628799 52638002 3824 13104 NC_000014.9 velvet.3926 99.96 True CONTIG velvet.3926 13104 correct CONTIG velvet.3943 387 unaligned CONTIG velvet.3945 214 unaligned 64308269 64308810 1 542 NC_000014.9 velvet.3963 100.0 True CONTIG velvet.3963 542 correct CONTIG velvet.3977 306 unaligned 70469496 70470750 1254 1 NC_000014.9 velvet.4032 98.65 True CONTIG velvet.4032 1254 correct CONTIG velvet.4057 367 unaligned 26081635 26082721 1 1088 NC_000014.9 velvet.4073 99.91 True CONTIG velvet.4073 1088 correct CONTIG velvet.4075 200 unaligned CONTIG velvet.4088 327 unaligned CONTIG velvet.4101 322 unaligned 105631138 105631775 1 638 NC_000014.9 velvet.4107 99.69 True CONTIG velvet.4107 638 correct 71550025 71550838 1 812 NC_000014.9 velvet.4116 99.75 True CONTIG velvet.4116 812 correct CONTIG velvet.4146 404 unaligned 105662496 105663279 784 1 NC_000014.9 velvet.4152 99.36 True CONTIG velvet.4152 784 correct CONTIG velvet.4166 33311 unaligned CONTIG velvet.4171 307 unaligned CONTIG velvet.4178 242 unaligned CONTIG velvet.4192 225 unaligned 19305119 19306725 1607 1 NC_000014.9 velvet.4202 99.94 True CONTIG velvet.4202 1607 correct CONTIG velvet.4236 387 unaligned CONTIG velvet.4242 251 unaligned 93310773 93313704 1 2932 NC_000014.9 velvet.4250 99.93 True CONTIG velvet.4250 2932 correct CONTIG velvet.4258 399 unaligned 85347829 85348337 1 509 NC_000014.9 velvet.4281 99.8 True CONTIG velvet.4281 1775 correct 94434600 94435299 908 209 NC_000014.9 velvet.4290 99.86 True CONTIG velvet.4290 908 correct 18343811 18346759 1 2949 NC_000014.9 velvet.4300 99.97 True CONTIG velvet.4300 2949 correct CONTIG velvet.4303 222 unaligned 19439392 19440085 1 694 NC_000014.9 velvet.4314 99.86 True CONTIG velvet.4314 694 correct CONTIG velvet.4333 200 unaligned 76061121 76061771 651 1 NC_000014.9 velvet.4334 100.0 True CONTIG velvet.4334 651 correct 105653700 105654698 1 1002 NC_000014.9 velvet.4338 99.0 True CONTIG velvet.4338 1002 correct CONTIG velvet.4344 217 unaligned CONTIG velvet.4385 218 unaligned CONTIG velvet.4400 473 unaligned CONTIG velvet.4423 239 unaligned CONTIG velvet.4424 430 unaligned CONTIG velvet.4425 378 unaligned CONTIG velvet.4433 228 unaligned CONTIG velvet.4440 243 unaligned CONTIG velvet.4445 218 unaligned CONTIG velvet.4477 237 unaligned CONTIG velvet.4478 288 unaligned 44851380 44852570 1 1191 NC_000014.9 velvet.4482 100.0 True fake: scaffold gap size wrong estimation (local) 44853403 44854432 2982 4011 NC_000014.9 velvet.4482 100.0 True CONTIG velvet.4482 4011 correct CONTIG velvet.4484 310 unaligned 57329239 57330290 2979 4030 NC_000014.9 velvet.4488 99.62 True fake: scaffold gap size wrong estimation (local) 57332302 57333105 6888 7691 NC_000014.9 velvet.4488 100.0 True CONTIG velvet.4488 11400 correct CONTIG velvet.4497 205 unaligned 19089618 19093090 1 3473 NC_000014.9 velvet.4501 99.86 True CONTIG velvet.4501 3473 correct 86881420 86881930 561 1 NC_000014.9 velvet.4502 100.0 True CONTIG velvet.4502 561 correct 54070876 54071783 908 1 NC_000014.9 velvet.4526 99.56 True CONTIG velvet.4526 4283 correct 36532129 36532958 1 830 NC_000014.9 velvet.4538 99.76 True CONTIG velvet.4538 830 correct CONTIG velvet.4557 279 unaligned CONTIG velvet.4566 261 unaligned CONTIG velvet.4577 473 unaligned CONTIG velvet.4593 207 unaligned CONTIG velvet.4621 340 unaligned CONTIG velvet.4624 259 unaligned 18299572 18301054 1 1483 NC_000014.9 velvet.4634 100.0 True CONTIG velvet.4634 1483 correct CONTIG velvet.4640 242 unaligned CONTIG velvet.4645 363 unaligned 19278507 19279504 1 998 NC_000014.9 velvet.4647 99.8 True CONTIG velvet.4647 998 correct CONTIG velvet.4649 291 unaligned 97060598 97061478 1 881 NC_000014.9 velvet.4656 99.89 True CONTIG velvet.4656 881 correct CONTIG velvet.4679 229 unaligned CONTIG velvet.4689 422 unaligned 46904359 46906993 1 2635 NC_000014.9 velvet.4700 99.96 True CONTIG velvet.4700 2635 correct 62750869 62751683 288 1102 NC_000014.9 velvet.4720 98.65 True CONTIG velvet.4720 1102 correct 19506746 19507432 688 2 NC_000014.9 velvet.4721 100.0 True CONTIG velvet.4721 688 correct 19501519 19502914 1 1396 NC_000014.9 velvet.4742 99.86 True CONTIG velvet.4742 1396 correct 104783449 104786550 1 3090 NC_000014.9 velvet.4746 99.61 True CONTIG velvet.4746 3090 correct CONTIG velvet.4750 201 unaligned 19416106 19416818 713 1 NC_000014.9 velvet.4753 99.86 True CONTIG velvet.4753 713 correct 72163078 72163630 1 553 NC_000014.9 velvet.4767 100.0 True CONTIG velvet.4767 553 correct CONTIG velvet.4791 203 unaligned 45835052 45835551 500 1 NC_000014.9 velvet.4806 100.0 True CONTIG velvet.4806 500 correct CONTIG velvet.4818 334 unaligned 19364828 19366681 1 1854 NC_000014.9 velvet.4832 99.95 True CONTIG velvet.4832 1854 correct CONTIG velvet.4834 274 unaligned CONTIG velvet.4856 229 unaligned CONTIG velvet.4859 277 unaligned 18316186 18317607 1 1422 NC_000014.9 velvet.4874 100.0 True CONTIG velvet.4874 1422 correct 19082031 19082606 1 576 NC_000014.9 velvet.4885 99.65 True CONTIG velvet.4885 576 correct CONTIG velvet.4896 298 unaligned CONTIG velvet.4909 386 unaligned CONTIG velvet.4922 285 unaligned 24001119 24001938 859 39 NC_000014.9 velvet.4932 99.03 True indel: stretch of mismatches 23999861 24001032 2120 946 NC_000014.9 velvet.4932 99.57 True CONTIG velvet.4932 2120 correct CONTIG velvet.4933 370 unaligned CONTIG velvet.4963 210 unaligned 45544688 45545322 1 635 NC_000014.9 velvet.4966 100.0 True inversion, scaffold gap is present 45562517 45569035 19981 13305 NC_000014.9 velvet.4966 99.91 True relocation, scaffold gap is present, inconsistency = 56944 45499657 45505562 19992 25897 NC_000014.9 velvet.4966 99.95 True fake: scaffold gap size wrong estimation (local) 45505823 45506577 26566 27320 NC_000014.9 velvet.4966 100.0 True fake: scaffold gap size wrong estimation (local) 45506949 45509372 28183 30606 NC_000014.9 velvet.4966 99.96 True fake: scaffold gap size wrong estimation (local) 45509496 45511210 30860 32543 NC_000014.9 velvet.4966 98.19 True fake: scaffold gap size wrong estimation (local) 45511496 45513453 33595 35552 NC_000014.9 velvet.4966 99.85 True relocation, scaffold gap is present, inconsistency = 13558336 59074904 59078095 38667 41858 NC_000014.9 velvet.4966 99.81 True relocation, scaffold gap is present, inconsistency = 150126 59230287 59232646 46283 43924 NC_000014.9 velvet.4966 99.07 True fake: scaffold gap size wrong estimation (local) 59227215 59230286 49468 46397 NC_000014.9 velvet.4966 99.8 True indel: indel (<= 5bp) 59225283 59227214 51401 49470 NC_000014.9 velvet.4966 99.43 True local misassembly 59218059 59221445 54788 51402 NC_000014.9 velvet.4966 100.0 True fake: scaffold gap size wrong estimation (local) 59216726 59217558 56649 55828 NC_000014.9 velvet.4966 98.42 True fake: scaffold gap size wrong estimation (local) 59213350 59216445 60459 57364 NC_000014.9 velvet.4966 99.97 True relocation, scaffold gap is present, inconsistency = 30009751 89226207 89234638 60470 68901 NC_000014.9 velvet.4966 99.82 True fake: scaffold gap size wrong estimation (local) 89262770 89263807 91939 92976 NC_000014.9 velvet.4966 100.0 True relocation, scaffold gap is present, inconsistency = 34197 89223032 89224871 98518 96678 NC_000014.9 velvet.4966 99.95 True fake: scaffold gap size wrong estimation (local) 89222090 89222950 99667 98807 NC_000014.9 velvet.4966 100.0 True fake: scaffold gap size wrong estimation (local) 89217413 89221809 105039 100643 NC_000014.9 velvet.4966 99.95 True relocation, scaffold gap is present, inconsistency = 55142301 34071989 34075101 108575 105050 NC_000014.9 velvet.4966 99.93 True local misassembly 34075171 34076678 110160 108653 NC_000014.9 velvet.4966 99.8 True relocation, scaffold gap is present, inconsistency = -55140022 89207185 89215182 118217 110171 NC_000014.9 velvet.4966 99.72 True fake: scaffold gap size wrong estimation (local) 89204048 89205134 121846 120760 NC_000014.9 velvet.4966 97.24 True fake: scaffold gap size wrong estimation (local) 89202846 89204047 123099 121898 NC_000014.9 velvet.4966 99.17 True fake: scaffold gap size wrong estimation (local) 89200026 89202845 128094 125275 NC_000014.9 velvet.4966 98.79 True relocation, scaffold gap is present, inconsistency = 55136688 34058528 34063139 133691 128293 NC_000014.9 velvet.4966 99.82 True relocation, scaffold gap is present, inconsistency = -55161005 89215348 89217254 137876 135970 NC_000014.9 velvet.4966 100.0 True fake: scaffold gap size wrong estimation (local) 89197505 89199627 154422 152300 NC_000014.9 velvet.4966 100.0 True fake: scaffold gap size wrong estimation (local) 89178424 89197249 174326 155480 NC_000014.9 velvet.4966 99.81 True fake: scaffold gap size wrong estimation (local) 89172352 89176989 181412 176785 NC_000014.9 velvet.4966 99.7 True relocation, scaffold gap is present, inconsistency = 47602484 41567150 41569730 181550 184130 NC_000014.9 velvet.4966 99.96 True fake: not a misassembly (possible transposable element) 28989809 28993198 187530 184141 NC_000014.9 velvet.4966 100.0 True fake: not a misassembly (possible transposable element) 41571557 41574968 187541 190952 NC_000014.9 velvet.4966 100.0 True relocation, scaffold gap is present, inconsistency = -12654365 28920614 28922258 190963 192607 NC_000014.9 velvet.4966 100.0 True relocation, scaffold gap is present, inconsistency = 60177079 89104963 89106759 198233 200071 NC_000014.9 velvet.4966 96.9 True fake: scaffold gap size wrong estimation (local) 89133132 89141250 220285 228403 NC_000014.9 velvet.4966 99.95 True fake: scaffold gap size wrong estimation (local) 89141480 89149800 229258 237559 NC_000014.9 velvet.4966 99.76 True fake: scaffold gap size wrong estimation (local) 89149965 89151092 238312 239491 NC_000014.9 velvet.4966 100.0 True relocation, scaffold gap is present, inconsistency = -34769798 54381715 54382726 239912 240923 NC_000014.9 velvet.4966 99.7 True fake: scaffold gap size wrong estimation (local) 54384117 54384660 243678 244221 NC_000014.9 velvet.4966 99.82 True relocation, scaffold gap is present, inconsistency = 34766664 89151335 89152034 244232 244925 NC_000014.9 velvet.4966 99.14 True relocation, scaffold gap is present, inconsistency = 29861175 59287888 59288510 247197 246575 NC_000014.9 velvet.4966 99.68 True fake: scaffold gap size wrong estimation (local) 59287067 59287799 248060 247328 NC_000014.9 velvet.4966 99.86 True relocation, scaffold gap is present, inconsistency = 30304030 28981962 28983026 249135 248071 NC_000014.9 velvet.4966 100.0 True relocation, scaffold gap is present, inconsistency = 12594276 41577313 41582408 249146 254230 NC_000014.9 velvet.4966 99.78 True relocation, scaffold gap is present, inconsistency = 47569683 89152102 89172357 254241 274891 NC_000014.9 velvet.4966 99.78 True relocation, scaffold gap is present, inconsistency = 60194387 28950666 28951846 281934 280760 NC_000014.9 velvet.4966 99.49 True relocation, scaffold gap is present, inconsistency = -51616742 80565311 80566834 284031 282508 NC_000014.9 velvet.4966 99.87 True relocation, scaffold gap is present, inconsistency = 51576471 28960222 28961376 312649 311495 NC_000014.9 velvet.4966 100.0 True fake: scaffold gap size wrong estimation (local) 28946641 28948274 321143 319502 NC_000014.9 velvet.4966 100.0 True fake: not a misassembly (possible transposable element) 57671085 57676136 344131 338895 NC_000014.9 velvet.4966 98.62 True fake: not a misassembly (possible transposable element) 28918207 28920288 346207 344142 NC_000014.9 velvet.4966 99.18 True fake: scaffold gap size wrong estimation (local) 28912555 28917493 352689 347751 NC_000014.9 velvet.4966 99.86 True relocation, scaffold gap is present, inconsistency = -28751437 57654543 57663981 362166 352700 NC_000014.9 velvet.4966 99.38 True relocation, scaffold gap is present, inconsistency = -12820 57666702 57667352 362827 362177 NC_000014.9 velvet.4966 98.16 True local misassembly 57665898 57666701 363793 362990 NC_000014.9 velvet.4966 98.76 True fake: scaffold gap size wrong estimation (local) 57647391 57654227 380843 374077 NC_000014.9 velvet.4966 98.84 True fake: not a misassembly (possible transposable element) 61939138 61942904 380854 384620 NC_000014.9 velvet.4966 99.97 True fake: not a misassembly (possible transposable element) 57635248 57643608 392991 384631 NC_000014.9 velvet.4966 100.0 True fake: scaffold gap size wrong estimation (local) 57628661 57635119 400362 393905 NC_000014.9 velvet.4966 99.81 True fake: scaffold gap size wrong estimation (local) 57596070 57599558 428699 425124 NC_000014.9 velvet.4966 99.86 True fake: scaffold gap size wrong estimation (local) 57588141 57590059 430628 428710 NC_000014.9 velvet.4966 99.95 True relocation, scaffold gap is present, inconsistency = -43699 57626487 57628112 435984 434356 NC_000014.9 velvet.4966 99.82 True fake: scaffold gap size wrong estimation (local) 57617400 57618481 447129 446045 NC_000014.9 velvet.4966 99.35 True fake: scaffold gap size wrong estimation (local) 57600697 57617104 464740 448213 NC_000014.9 velvet.4966 99.28 True fake: scaffold gap size wrong estimation (local) 57599803 57600395 466037 465445 NC_000014.9 velvet.4966 99.83 True fake: scaffold gap size wrong estimation (local) 57590343 57596058 471761 466048 NC_000014.9 velvet.4966 99.76 True fake: scaffold gap size wrong estimation (local) 57575988 57582251 491207 484232 NC_000014.9 velvet.4966 99.98 True relocation, scaffold gap is present, inconsistency = 18366637 39203285 39203785 497273 496773 NC_000014.9 velvet.4966 99.8 True relocation, scaffold gap is present, inconsistency = -4600276 43790931 43802733 510484 498101 NC_000014.9 velvet.4966 99.86 True relocation, scaffold gap is present, inconsistency = 38248 43738042 43751857 511310 527152 NC_000014.9 velvet.4966 99.82 True fake: scaffold gap size wrong estimation (local) 43752119 43756549 528005 532871 NC_000014.9 velvet.4966 99.95 True relocation, scaffold gap is present, inconsistency = 18568326 62324886 62325798 533793 532882 NC_000014.9 velvet.4966 99.67 True fake: scaffold gap size wrong estimation (local) 62323860 62324540 534901 534184 NC_000014.9 velvet.4966 99.84 True relocation, scaffold gap is present, inconsistency = 37724950 24595943 24598414 537868 535397 NC_000014.9 velvet.4966 99.84 True fake: not a misassembly (possible transposable element) 43757400 43761112 537879 541591 NC_000014.9 velvet.4966 99.97 True fake: not a misassembly (possible transposable element) 24595087 24595939 542454 541602 NC_000014.9 velvet.4966 99.77 True relocation, scaffold gap is present, inconsistency = -19186083 43774447 43776223 549199 547401 NC_000014.9 velvet.4966 99.11 True inversion, scaffold gap is present 43776571 43780302 550953 554715 NC_000014.9 velvet.4966 98.94 True fake: scaffold gap size wrong estimation (local) 43781570 43782718 556619 557767 NC_000014.9 velvet.4966 100.0 True fake: scaffold gap size wrong estimation (local) 43783005 43784435 558524 559954 NC_000014.9 velvet.4966 100.0 True fake: scaffold gap size wrong estimation (local) 43784866 43787440 561029 563625 NC_000014.9 velvet.4966 99.09 True fake: scaffold gap size wrong estimation (local) 43787646 43790925 564670 567949 NC_000014.9 velvet.4966 99.91 True relocation, scaffold gap is present, inconsistency = 13784507 57575443 57575967 568484 567960 NC_000014.9 velvet.4966 100.0 True fake: scaffold gap size wrong estimation (local) 57559371 57575192 585201 569380 NC_000014.9 velvet.4966 99.93 True relocation, scaffold gap is present, inconsistency = 32105101 89710445 89713584 615353 618610 NC_000014.9 velvet.4966 97.49 True relocation, scaffold gap is present, inconsistency = 32149820 57553534 57559349 626808 619886 NC_000014.9 velvet.4966 99.91 True inversion, scaffold gap is present 57545523 57550131 629628 634461 NC_000014.9 velvet.4966 99.96 True fake: not a misassembly (possible transposable element) 43780285 43781524 635711 634472 NC_000014.9 velvet.4966 100.0 True fake: not a misassembly (possible transposable element) 57550112 57550642 635733 636263 NC_000014.9 velvet.4966 100.0 True relocation, scaffold gap is present, inconsistency = 5375868 52149645 52153032 660864 657475 NC_000014.9 velvet.4966 99.79 True relocation, scaffold gap is present, inconsistency = 13436222 38710339 38713412 660875 663948 NC_000014.9 velvet.4966 99.97 True relocation, scaffold gap is present, inconsistency = 18869071 57582494 57585226 663959 666691 NC_000014.9 velvet.4966 100.0 True relocation, scaffold gap is present, inconsistency = 11032612 68617849 68619218 666702 668071 NC_000014.9 velvet.4966 100.0 True relocation, scaffold gap is present, inconsistency = 11084000 57526948 57533838 674972 668082 NC_000014.9 velvet.4966 100.0 True relocation, scaffold gap is present, inconsistency = 1473939 56020009 56024340 707972 703641 NC_000014.9 velvet.4966 100.0 True relocation, scaffold gap is present, inconsistency = 12594788 68619481 68628710 708325 717625 NC_000014.9 velvet.4966 99.96 True fake: scaffold gap size wrong estimation (local) 68633014 68636368 719075 722465 NC_000014.9 velvet.4966 99.97 True fake: scaffold gap size wrong estimation (local) 68636606 68637128 723076 723598 NC_000014.9 velvet.4966 99.62 True fake: scaffold gap size wrong estimation (local) 68637341 68639867 724358 726884 NC_000014.9 velvet.4966 99.92 True fake: scaffold gap size wrong estimation (local) 68640081 68647733 727865 735613 NC_000014.9 velvet.4966 99.95 True fake: scaffold gap size wrong estimation (local) 68648186 68657448 736586 745824 NC_000014.9 velvet.4966 99.65 True fake: scaffold gap size wrong estimation (local) 68663354 68682906 747212 766704 NC_000014.9 velvet.4966 99.49 True relocation, scaffold gap is present, inconsistency = -25437 68657480 68663069 766715 772304 NC_000014.9 velvet.4966 100.0 True fake: scaffold gap size wrong estimation (local) 68688301 68697743 793720 803162 NC_000014.9 velvet.4966 99.93 True fake: scaffold gap size wrong estimation (local) 68699172 68700297 805409 806534 NC_000014.9 velvet.4966 100.0 True fake: scaffold gap size wrong estimation (local) 68700591 68701739 806673 807821 NC_000014.9 velvet.4966 99.91 True relocation, scaffold gap is present, inconsistency = -19370 68683136 68687324 808588 813148 NC_000014.9 velvet.4966 97.19 True fake: scaffold gap size wrong estimation (local) 68702002 68714544 821591 834131 NC_000014.9 velvet.4966 99.86 True fake: scaffold gap size wrong estimation (local) 68714745 68716260 835202 836717 NC_000014.9 velvet.4966 99.87 True fake: scaffold gap size wrong estimation (local) 68721668 68724500 836728 839560 NC_000014.9 velvet.4966 99.89 True relocation, scaffold gap is present, inconsistency = -8013 68716498 68717827 839571 840870 NC_000014.9 velvet.4966 97.35 True fake: scaffold gap size wrong estimation (local) 68718109 68719365 841584 842840 NC_000014.9 velvet.4966 99.76 True fake: scaffold gap size wrong estimation (local) 68719378 68721363 843443 845419 NC_000014.9 velvet.4966 99.44 True fake: scaffold gap size wrong estimation (local) 68724884 68727470 845430 847992 NC_000014.9 velvet.4966 98.79 True fake: scaffold gap size wrong estimation (local) 68727574 68729227 848831 850484 NC_000014.9 velvet.4966 99.88 True fake: scaffold gap size wrong estimation (local) 68729522 68732546 851397 854421 NC_000014.9 velvet.4966 99.87 True fake: scaffold gap size wrong estimation (local) 68732851 68735292 855505 857946 NC_000014.9 velvet.4966 100.0 True fake: scaffold gap size wrong estimation (local) 68735768 68740190 859252 863612 NC_000014.9 velvet.4966 98.53 True fake: scaffold gap size wrong estimation (local) 68740474 68741734 864693 865953 NC_000014.9 velvet.4966 100.0 True fake: scaffold gap size wrong estimation (local) 68744098 68746713 866046 870105 NC_000014.9 velvet.4966 98.55 True local misassembly 68741751 68743757 870116 872130 NC_000014.9 velvet.4966 99.6 True fake: scaffold gap size wrong estimation (local) 68746983 68751321 872141 876467 NC_000014.9 velvet.4966 99.68 True fake: scaffold gap size wrong estimation (local) 68751610 68754600 877592 880582 NC_000014.9 velvet.4966 99.9 True fake: scaffold gap size wrong estimation (local) 68754788 68755386 881190 881788 NC_000014.9 velvet.4966 100.0 True fake: scaffold gap size wrong estimation (local) 68755486 68762144 882337 889174 NC_000014.9 velvet.4966 99.94 True fake: scaffold gap size wrong estimation (local) 68762329 68764097 890114 891861 NC_000014.9 velvet.4966 98.69 True fake: scaffold gap size wrong estimation (local) 68764424 68765201 892484 893261 NC_000014.9 velvet.4966 99.23 True fake: scaffold gap size wrong estimation (local) 68779541 68797858 901285 920688 NC_000014.9 velvet.4966 99.93 True relocation, scaffold gap is present, inconsistency = -20582 68777287 68778822 920699 922234 NC_000014.9 velvet.4966 100.0 True relocation, scaffold gap is present, inconsistency = 4974025 63799676 63800223 925820 925273 NC_000014.9 velvet.4966 97.99 True fake: scaffold gap size wrong estimation (local) 63794461 63794987 933888 933362 NC_000014.9 velvet.4966 100.0 True fake: scaffold gap size wrong estimation (local) 63790203 63790960 938901 938149 NC_000014.9 velvet.4966 99.21 True fake: scaffold gap size wrong estimation (local) 63787033 63789526 942908 940370 NC_000014.9 velvet.4966 99.92 True fake: scaffold gap size wrong estimation (local) 63785463 63785966 945420 944917 NC_000014.9 velvet.4966 99.8 True relocation, scaffold gap is present, inconsistency = 4977429 68799697 68802633 981722 984658 NC_000014.9 velvet.4966 99.97 True fake: scaffold gap size wrong estimation (local) 68802872 68804046 985496 986670 NC_000014.9 velvet.4966 99.91 True fake: scaffold gap size wrong estimation (extensive) 68838697 68840174 1011604 1013148 NC_000014.9 velvet.4966 99.79 True fake: not a misassembly (possible transposable element) 81445328 81446757 1015041 1013565 NC_000014.9 velvet.4966 99.51 True fake: not a misassembly (possible transposable element) 68850157 68850816 1019916 1020575 NC_000014.9 velvet.4966 100.0 True relocation, scaffold gap is present, inconsistency = 12585601 81436503 81437844 1022002 1020661 NC_000014.9 velvet.4966 100.0 True relocation, scaffold gap is present, inconsistency = 12593238 68841111 68843051 1022216 1024156 NC_000014.9 velvet.4966 99.95 True fake: scaffold gap size wrong estimation (local) 68849320 68849967 1024189 1024836 NC_000014.9 velvet.4966 100.0 True fake: scaffold gap size wrong estimation (local) 68851102 68852081 1026831 1027810 NC_000014.9 velvet.4966 100.0 True fake: scaffold gap size wrong estimation (local) 68882225 68883754 1056263 1057792 NC_000014.9 velvet.4966 99.87 True CONTIG velvet.4966 1057792 misassembled 19355528 19356317 790 1 NC_000014.9 velvet.4974 99.87 True CONTIG velvet.4974 790 correct 19303393 19304364 972 1 NC_000014.9 velvet.4976 99.79 True CONTIG velvet.4976 972 correct CONTIG velvet.4984 261 unaligned CONTIG velvet.4989 339 unaligned 18975108 18976223 1116 1 NC_000014.9 velvet.4993 99.55 True CONTIG velvet.4993 1116 correct 76017756 76018391 636 1 NC_000014.9 velvet.4994 100.0 True CONTIG velvet.4994 640 correct CONTIG velvet.5009 276 unaligned CONTIG velvet.5011 266 unaligned 28961630 28962409 2828 3607 NC_000014.9 velvet.5018 100.0 True CONTIG velvet.5018 3607 correct 77767397 77767937 1 541 NC_000014.9 velvet.5028 99.82 True CONTIG velvet.5028 541 correct 76427342 76428060 719 1 NC_000014.9 velvet.5037 100.0 True CONTIG velvet.5037 719 correct CONTIG velvet.5047 449 unaligned CONTIG velvet.5050 330 unaligned 86964847 86965759 2948 2035 NC_000014.9 velvet.5064 99.02 True fake: scaffold gap size wrong estimation (local) 86959876 86964484 8340 3730 NC_000014.9 velvet.5064 99.67 True relocation, scaffold gap is present, inconsistency = -35510 86992628 86994559 11170 9167 NC_000014.9 velvet.5064 96.09 True fake: scaffold gap size wrong estimation (local) 86991610 86992382 12230 11458 NC_000014.9 velvet.5064 100.0 True fake: scaffold gap size wrong estimation (local) 86987401 86991318 17306 13389 NC_000014.9 velvet.5064 99.95 True fake: scaffold gap size wrong estimation (local) 86984568 86987162 20943 18349 NC_000014.9 velvet.5064 99.92 True fake: scaffold gap size wrong estimation (local) 86983458 86984403 22487 21542 NC_000014.9 velvet.5064 100.0 True fake: scaffold gap size wrong estimation (local) 86980290 86983249 26173 23214 NC_000014.9 velvet.5064 99.83 True relocation, scaffold gap is present, inconsistency = 14588 86952416 86959767 39546 32108 NC_000014.9 velvet.5064 99.99 True fake: scaffold gap size wrong estimation (local) 86949327 86952231 43499 40486 NC_000014.9 velvet.5064 99.97 True fake: scaffold gap size wrong estimation (local) 86947634 86949043 45907 44456 NC_000014.9 velvet.5064 99.93 True fake: scaffold gap size wrong estimation (local) 86946365 86947284 47163 46256 NC_000014.9 velvet.5064 98.68 True fake: scaffold gap size wrong estimation (local) 86931976 86939353 55150 47773 NC_000014.9 velvet.5064 99.97 True relocation, scaffold gap is present, inconsistency = -14372 86944069 86946337 57429 55161 NC_000014.9 velvet.5064 100.0 True fake: scaffold gap size wrong estimation (local) 86939476 86943752 62807 58532 NC_000014.9 velvet.5064 99.91 True fake: scaffold gap size wrong estimation (extensive) 86923670 86931720 70879 62829 NC_000014.9 velvet.5064 99.96 True fake: scaffold gap size wrong estimation (local) 86911103 86913659 88623 85777 NC_000014.9 velvet.5064 97.85 True relocation, scaffold gap is present, inconsistency = -10373 86920711 86921465 89388 88634 NC_000014.9 velvet.5064 100.0 True fake: scaffold gap size wrong estimation (extensive) 86905918 86910832 95347 90433 NC_000014.9 velvet.5064 99.94 True fake: scaffold gap size wrong estimation (local) 86872877 86874455 123769 122192 NC_000014.9 velvet.5064 99.56 True relocation, scaffold gap is present, inconsistency = 90530 86967014 86969878 125798 128662 NC_000014.9 velvet.5064 100.0 True fake: scaffold gap size wrong estimation (local) 86970210 86975416 129758 134961 NC_000014.9 velvet.5064 99.94 True fake: scaffold gap size wrong estimation (local) 86975950 86976560 136421 137052 NC_000014.9 velvet.5064 95.43 True fake: scaffold gap size wrong estimation (local) 86977091 86978208 137363 138525 NC_000014.9 velvet.5064 95.85 True relocation, scaffold gap is present, inconsistency = 6112535 80859537 80864545 143500 138536 NC_000014.9 velvet.5064 99.06 True fake: scaffold gap size wrong estimation (local) 80857236 80857957 146774 146056 NC_000014.9 velvet.5064 99.58 True inversion, scaffold gap is present 80864862 80869698 146785 151621 NC_000014.9 velvet.5064 99.92 True fake: scaffold gap size wrong estimation (local) 80869786 80870645 151770 152629 NC_000014.9 velvet.5064 99.88 True fake: scaffold gap size wrong estimation (local) 80874922 80876342 153875 155295 NC_000014.9 velvet.5064 99.93 True fake: scaffold gap size wrong estimation (local) 80876728 80880631 156358 160261 NC_000014.9 velvet.5064 99.69 True fake: scaffold gap size wrong estimation (local) 80881151 80885088 161701 165618 NC_000014.9 velvet.5064 99.13 True fake: scaffold gap size wrong estimation (local) 80890992 80891600 169470 170078 NC_000014.9 velvet.5064 99.84 True fake: scaffold gap size wrong estimation (local) 80891601 80892710 170132 171241 NC_000014.9 velvet.5064 98.47 True indel: indel (> 5bp) 80892733 80893520 171242 172029 NC_000014.9 velvet.5064 98.6 True fake: scaffold gap size wrong estimation (local) 80893521 80894559 172502 173540 NC_000014.9 velvet.5064 98.17 True fake: scaffold gap size wrong estimation (local) 80894560 80895819 174029 175288 NC_000014.9 velvet.5064 97.78 True fake: scaffold gap size wrong estimation (local) 80895820 80897791 178407 180378 NC_000014.9 velvet.5064 99.24 True fake: scaffold gap size wrong estimation (local) 80898055 80900951 181387 184283 NC_000014.9 velvet.5064 100.0 True fake: scaffold gap size wrong estimation (local) 80901222 80907525 185323 191769 NC_000014.9 velvet.5064 99.84 True fake: scaffold gap size wrong estimation (local) 80907689 80911255 192558 197041 NC_000014.9 velvet.5064 96.92 True fake: scaffold gap size wrong estimation (local) 80912247 80915134 198577 201693 NC_000014.9 velvet.5064 98.26 True fake: scaffold gap size wrong estimation (local) 80915325 80917570 202578 204823 NC_000014.9 velvet.5064 99.91 True fake: scaffold gap size wrong estimation (local) 80917667 80921512 205609 209454 NC_000014.9 velvet.5064 99.92 True fake: scaffold gap size wrong estimation (local) 80921994 80935296 210807 224979 NC_000014.9 velvet.5064 98.95 True fake: scaffold gap size wrong estimation (local) 80954305 80967196 244227 258668 NC_000014.9 velvet.5064 99.48 True fake: scaffold gap size wrong estimation (local) 80967567 80970968 259693 263626 NC_000014.9 velvet.5064 98.97 True relocation, scaffold gap is present, inconsistency = 36477 81008443 81011198 267381 264624 NC_000014.9 velvet.5064 99.89 True fake: scaffold gap size wrong estimation (local) 81006768 81008156 269732 268344 NC_000014.9 velvet.5064 100.0 True fake: scaffold gap size wrong estimation (local) 81003054 81006561 274027 270535 NC_000014.9 velvet.5064 99.29 True fake: scaffold gap size wrong estimation (local) 81000206 81002775 277488 274919 NC_000014.9 velvet.5064 99.84 True relocation, scaffold gap is present, inconsistency = 24211 80971116 80973149 280334 282367 NC_000014.9 velvet.5064 99.9 True fake: scaffold gap size wrong estimation (local) 80973434 80975929 283444 285939 NC_000014.9 velvet.5064 99.84 True fake: scaffold gap size wrong estimation (local) 80976202 80982617 287003 293549 NC_000014.9 velvet.5064 99.45 True fake: not a misassembly (possible transposable element) 80986770 80988276 295066 293560 NC_000014.9 velvet.5064 99.73 True fake: not a misassembly (possible transposable element) 80985261 80986617 296162 297546 NC_000014.9 velvet.5064 97.83 True inversion, scaffold gap is present 80982608 80984955 299904 297557 NC_000014.9 velvet.5064 99.96 True relocation, scaffold gap is present, inconsistency = 58931136 22050656 22051461 299915 300720 NC_000014.9 velvet.5064 99.88 True fake: not a misassembly (possible transposable element) 80988518 80990691 300731 302871 NC_000014.9 velvet.5064 98.34 True fake: not a misassembly (possible transposable element) 22052374 22053467 304697 305790 NC_000014.9 velvet.5064 99.45 True relocation, scaffold gap is present, inconsistency = 58937703 80991302 80992142 305922 306762 NC_000014.9 velvet.5064 99.88 True fake: scaffold gap size wrong estimation (local) 80992449 80994963 307350 310127 NC_000014.9 velvet.5064 97.06 True fake: scaffold gap size wrong estimation (local) 80995868 80999945 311195 315965 NC_000014.9 velvet.5064 99.85 True fake: scaffold gap size wrong estimation (extensive) 81018086 81019176 325470 326560 NC_000014.9 velvet.5064 99.82 True fake: scaffold gap size wrong estimation (local) 81020087 81020924 328412 329249 NC_000014.9 velvet.5064 100.0 True local misassembly 81021078 81022010 329250 330182 NC_000014.9 velvet.5064 98.82 True fake: scaffold gap size wrong estimation (local) 81022800 81024267 331925 333392 NC_000014.9 velvet.5064 100.0 True relocation, scaffold gap is present, inconsistency = -13025 81011253 81011805 333403 333955 NC_000014.9 velvet.5064 100.0 True fake: scaffold gap size wrong estimation (local) 81013423 81017846 335758 340181 NC_000014.9 velvet.5064 99.91 True relocation, scaffold gap is present, inconsistency = 60105 80944837 80953304 348620 340195 NC_000014.9 velvet.5064 99.18 True fake: scaffold gap size wrong estimation (local) 80940673 80943723 353597 350547 NC_000014.9 velvet.5064 99.74 True fake: scaffold gap size wrong estimation (local) 80939331 80940494 355785 354622 NC_000014.9 velvet.5064 98.71 True indel: indel (> 5bp) 80938510 80939316 356592 355786 NC_000014.9 velvet.5064 98.51 True fake: scaffold gap size wrong estimation (local) 80935647 80937884 360213 357938 NC_000014.9 velvet.5064 99.86 True relocation, scaffold gap is present, inconsistency = 83459 81024542 81026779 363412 365649 NC_000014.9 velvet.5064 99.91 True fake: scaffold gap size wrong estimation (local) 81027059 81033559 366742 374169 NC_000014.9 velvet.5064 99.91 True fake: scaffold gap size wrong estimation (local) 81033651 81036889 374882 378120 NC_000014.9 velvet.5064 99.81 True fake: scaffold gap size wrong estimation (local) 81037173 81038724 379191 380742 NC_000014.9 velvet.5064 99.87 True fake: scaffold gap size wrong estimation (local) 81039024 81040685 381763 383450 NC_000014.9 velvet.5064 97.81 True fake: scaffold gap size wrong estimation (local) 81041677 81042326 385267 385916 NC_000014.9 velvet.5064 100.0 True fake: scaffold gap size wrong estimation (local) 81045625 81047692 389883 391950 NC_000014.9 velvet.5064 100.0 True fake: scaffold gap size wrong estimation (local) 81047950 81054177 392766 400082 NC_000014.9 velvet.5064 96.74 True fake: scaffold gap size wrong estimation (local) 81056089 81057155 402605 403671 NC_000014.9 velvet.5064 99.91 True fake: scaffold gap size wrong estimation (local) 81057417 81058613 404248 405444 NC_000014.9 velvet.5064 99.83 True fake: scaffold gap size wrong estimation (local) 81058645 81067505 406015 414913 NC_000014.9 velvet.5064 99.44 True fake: scaffold gap size wrong estimation (local) 81067617 81070376 415742 418558 NC_000014.9 velvet.5064 99.96 True fake: scaffold gap size wrong estimation (local) 81070659 81072780 419687 421808 NC_000014.9 velvet.5064 100.0 True fake: scaffold gap size wrong estimation (local) 81073056 81075520 422792 425256 NC_000014.9 velvet.5064 99.96 True fake: scaffold gap size wrong estimation (local) 81076149 81079847 426679 430424 NC_000014.9 velvet.5064 100.0 True fake: scaffold gap size wrong estimation (local) 81080255 81088953 431609 442096 NC_000014.9 velvet.5064 98.76 True fake: scaffold gap size wrong estimation (local) 81090528 81094687 444433 448592 NC_000014.9 velvet.5064 99.98 True fake: scaffold gap size wrong estimation (local) 81094820 81095323 449353 449856 NC_000014.9 velvet.5064 100.0 True CONTIG velvet.5064 449856 misassembled 63823626 63824236 1 611 NC_000014.9 velvet.5067 99.35 True CONTIG velvet.5067 611 correct CONTIG velvet.5068 231 unaligned CONTIG velvet.5077 286 unaligned CONTIG velvet.5094 254 unaligned CONTIG velvet.5095 232 unaligned CONTIG velvet.5102 227 unaligned CONTIG velvet.5108 296 unaligned CONTIG velvet.5111 451 unaligned CONTIG velvet.5118 237 unaligned CONTIG velvet.5123 399 unaligned CONTIG velvet.5133 273 unaligned CONTIG velvet.5145 359 unaligned 105581466 105582007 1 542 NC_000014.9 velvet.5172 99.26 True CONTIG velvet.5172 542 correct CONTIG velvet.5173 299 unaligned CONTIG velvet.5205 243 unaligned 19436469 19437753 1285 1 NC_000014.9 velvet.5206 99.77 True CONTIG velvet.5206 1285 correct CONTIG velvet.5212 345 unaligned CONTIG velvet.5216 263 unaligned 105614780 105616021 1 1238 NC_000014.9 velvet.5223 98.07 True CONTIG velvet.5223 1238 correct CONTIG velvet.5228 280 unaligned 19444219 19444825 1 607 NC_000014.9 velvet.5238 100.0 True CONTIG velvet.5238 607 correct 50113054 50113620 567 1 NC_000014.9 velvet.5241 99.65 True CONTIG velvet.5241 567 correct CONTIG velvet.5243 337 unaligned CONTIG velvet.5256 286 unaligned CONTIG velvet.5257 232 unaligned 18333330 18334718 1389 1 NC_000014.9 velvet.5268 99.93 True CONTIG velvet.5268 1389 correct CONTIG velvet.5271 299 unaligned CONTIG velvet.5272 341 unaligned 46018106 46019489 3218 4601 NC_000014.9 velvet.5287 99.93 True CONTIG velvet.5287 4601 correct CONTIG velvet.5289 321 unaligned CONTIG velvet.5296 273 unaligned CONTIG velvet.5298 210 unaligned CONTIG velvet.5305 310 unaligned 20874838 20876169 1 1332 NC_000014.9 velvet.5314 99.47 True CONTIG velvet.5314 1332 correct 18952068 18952611 544 1 NC_000014.9 velvet.5333 100.0 True CONTIG velvet.5333 544 correct 18289834 18292690 1 2857 NC_000014.9 velvet.5348 99.68 True CONTIG velvet.5348 2857 correct CONTIG velvet.5351 235 unaligned 19192499 19193505 1 1007 NC_000014.9 velvet.5352 99.8 True CONTIG velvet.5352 1007 correct CONTIG velvet.5354 207 unaligned CONTIG velvet.5356 372 unaligned CONTIG velvet.5359 227 unaligned 27797574 27800506 2933 1 NC_000014.9 velvet.5375 100.0 True CONTIG velvet.5375 2933 correct 67402095 67402716 1 622 NC_000014.9 velvet.5381 100.0 True CONTIG velvet.5381 1041 correct 20179239 20179760 1 522 NC_000014.9 velvet.5400 99.62 True CONTIG velvet.5400 534 correct CONTIG velvet.5406 316 unaligned CONTIG velvet.5408 242 unaligned CONTIG velvet.5410 346 unaligned CONTIG velvet.5414 227 unaligned 23963937 23964634 3156 3891 NC_000014.9 velvet.5427 99.85 True CONTIG velvet.5427 3891 correct CONTIG velvet.5447 244 unaligned 58393416 58394169 1 754 NC_000014.9 velvet.5453 100.0 True CONTIG velvet.5453 754 correct 105582227 105582741 1 515 NC_000014.9 velvet.5454 99.22 True CONTIG velvet.5454 515 correct 85110582 85111832 1 1251 NC_000014.9 velvet.5460 99.92 True CONTIG velvet.5460 1251 correct CONTIG velvet.5469 337 unaligned 105659758 105660487 1 730 NC_000014.9 velvet.5480 99.86 True CONTIG velvet.5480 730 correct 21904632 21905543 912 1 NC_000014.9 velvet.5483 99.56 True relocation, scaffold gap is present, inconsistency = 13984 21873477 21883494 18088 8066 NC_000014.9 velvet.5483 99.83 True inversion, scaffold gap is present 21883534 21887082 18791 22339 NC_000014.9 velvet.5483 99.69 True fake: scaffold gap size wrong estimation (local) 21891906 21894181 22350 24625 NC_000014.9 velvet.5483 99.65 True relocation, scaffold gap is present, inconsistency = -58723 21835469 21838713 24636 27880 NC_000014.9 velvet.5483 99.78 True relocation, scaffold gap is present, inconsistency = 30109 21869815 21873445 32504 28873 NC_000014.9 velvet.5483 99.7 True fake: scaffold gap size wrong estimation (local) 21865463 21869538 38362 33509 NC_000014.9 velvet.5483 99.83 True relocation, scaffold gap is present, inconsistency = -36774 21894318 21894839 46281 45760 NC_000014.9 velvet.5483 100.0 True fake: scaffold gap size wrong estimation (local) 21889532 21891751 51614 49395 NC_000014.9 velvet.5483 99.68 True relocation, scaffold gap is present, inconsistency = -13591 21901153 21903013 53584 51724 NC_000014.9 velvet.5483 99.62 True relocation, scaffold gap is present, inconsistency = 58373 21841472 21842168 54892 54196 NC_000014.9 velvet.5483 99.86 True local misassembly 21842174 21846457 59186 54903 NC_000014.9 velvet.5483 99.86 True fake: scaffold gap size wrong estimation (local) 21838935 21840988 62145 60092 NC_000014.9 velvet.5483 99.76 True relocation, scaffold gap is present, inconsistency = -9951 21846773 21848875 64259 62156 NC_000014.9 velvet.5483 99.24 True relocation, scaffold gap is present, inconsistency = -60134 21905786 21906896 65380 64270 NC_000014.9 velvet.5483 99.82 True relocation, scaffold gap is present, inconsistency = 69566 21833696 21835437 67904 66163 NC_000014.9 velvet.5483 99.83 True fake: scaffold gap size wrong estimation (local) 21832775 21833608 68989 68155 NC_000014.9 velvet.5483 99.76 True relocation, scaffold gap is present, inconsistency = -63682 21895177 21896432 70269 69014 NC_000014.9 velvet.5483 99.76 True local misassembly 21899458 21900760 71583 70281 NC_000014.9 velvet.5483 99.46 True fake: scaffold gap size wrong estimation (local) 21864920 21865431 100003 99492 NC_000014.9 velvet.5483 99.8 True relocation, scaffold gap is present, inconsistency = 32223 21828205 21832686 104465 100014 NC_000014.9 velvet.5483 97.41 True relocation, scaffold gap is present, inconsistency = -40228 21857116 21864556 115782 108342 NC_000014.9 velvet.5483 97.67 True fake: scaffold gap size wrong estimation (local) 21856390 21857033 117219 116576 NC_000014.9 velvet.5483 99.69 True relocation, scaffold gap is present, inconsistency = 42135 21808678 21811279 122796 120195 NC_000014.9 velvet.5483 99.73 True relocation, scaffold gap is present, inconsistency = -19553 21826773 21827987 124254 123040 NC_000014.9 velvet.5483 100.0 True fake: scaffold gap size wrong estimation (local) 21823612 21826482 128415 125457 NC_000014.9 velvet.5483 95.7 True fake: scaffold gap size wrong estimation (local) 21820380 21822913 132337 129804 NC_000014.9 velvet.5483 99.8 True fake: scaffold gap size wrong estimation (local) 21811299 21813110 136923 135113 NC_000014.9 velvet.5483 99.5 True relocation, scaffold gap is present, inconsistency = -45090 21852352 21856378 140959 136934 NC_000014.9 velvet.5483 99.28 True fake: scaffold gap size wrong estimation (local) 21850963 21852243 142409 141129 NC_000014.9 velvet.5483 99.92 True relocation, scaffold gap is present, inconsistency = 54699 21906953 21909422 142420 144890 NC_000014.9 velvet.5483 99.43 True relocation, scaffold gap is present, inconsistency = 98292 21804607 21805373 148944 148178 NC_000014.9 velvet.5483 99.87 True fake: scaffold gap size wrong estimation (local) 21799806 21804310 154585 150081 NC_000014.9 velvet.5483 99.87 True fake: scaffold gap size wrong estimation (local) 21795294 21799540 159608 155357 NC_000014.9 velvet.5483 99.88 True relocation, scaffold gap is present, inconsistency = 109955 21909506 21910087 159619 160200 NC_000014.9 velvet.5483 99.83 True fake: scaffold gap size wrong estimation (local) 21910812 21927437 161506 178133 NC_000014.9 velvet.5483 99.75 True fake: scaffold gap size wrong estimation (local) 21954038 21955035 202323 203326 NC_000014.9 velvet.5483 99.9 True fake: not a misassembly (possible transposable element) 27146433 27148690 203643 205901 NC_000014.9 velvet.5483 99.91 True fake: not a misassembly (possible transposable element) 21955344 21968654 206071 220141 NC_000014.9 velvet.5483 99.51 True CONTIG velvet.5483 223403 misassembled CONTIG velvet.5496 256 unaligned 105740880 105741615 737 1 NC_000014.9 velvet.5510 98.78 True CONTIG velvet.5510 743 correct 62764520 62765024 1 505 NC_000014.9 velvet.5513 99.8 True CONTIG velvet.5513 505 correct 18981202 18983637 2435 1 NC_000014.9 velvet.5525 99.75 True CONTIG velvet.5525 2435 correct 19344474 19349289 4826 11 NC_000014.9 velvet.5542 99.88 True CONTIG velvet.5542 4826 correct 95758349 95762212 1 3864 NC_000014.9 velvet.5544 100.0 True CONTIG velvet.5544 3864 correct 105053433 105054438 1006 1 NC_000014.9 velvet.5592 99.9 True CONTIG velvet.5592 1561 correct CONTIG velvet.5593 214 unaligned 19636908 19640424 3516 1 NC_000014.9 velvet.5598 99.89 True CONTIG velvet.5598 3516 correct CONTIG velvet.5606 374 unaligned CONTIG velvet.5611 496 unaligned 19272134 19272669 536 1 NC_000014.9 velvet.5617 99.81 True CONTIG velvet.5617 536 correct 46432011 46432822 818 1 NC_000014.9 velvet.5620 99.63 True relocation, scaffold gap is present, inconsistency = 16318334 62758221 62761076 7883 11666 NC_000014.9 velvet.5620 99.4 True fake: scaffold gap size wrong estimation (local) 62761390 62763280 12655 14545 NC_000014.9 velvet.5620 99.95 True indel: indel (> 5bp) 62763324 62765130 14546 16352 NC_000014.9 velvet.5620 99.17 True local misassembly 62766167 62767138 17380 18351 NC_000014.9 velvet.5620 98.35 True fake: scaffold gap size wrong estimation (local) 62772639 62776019 18538 21918 NC_000014.9 velvet.5620 100.0 True fake: scaffold gap size wrong estimation (local) 62776298 62781182 22930 27810 NC_000014.9 velvet.5620 99.73 True fake: not a misassembly (possible transposable element) 46395742 46401625 35325 29335 NC_000014.9 velvet.5620 99.85 True fake: not a misassembly (possible transposable element) 62786220 62789880 36251 39911 NC_000014.9 velvet.5620 99.92 True fake: scaffold gap size wrong estimation (local) 62790099 62796262 40567 47082 NC_000014.9 velvet.5620 96.81 True fake: scaffold gap size wrong estimation (local) 62796413 62797733 47829 49148 NC_000014.9 velvet.5620 99.85 True fake: scaffold gap size wrong estimation (local) 62798118 62799332 49696 50910 NC_000014.9 velvet.5620 99.92 True fake: scaffold gap size wrong estimation (local) 62799889 62801390 51987 53488 NC_000014.9 velvet.5620 99.87 True relocation, scaffold gap is present, inconsistency = 32439 62854007 62858499 78141 73666 NC_000014.9 velvet.5620 98.66 True fake: scaffold gap size wrong estimation (local) 62847081 62853446 86603 79375 NC_000014.9 velvet.5620 100.0 True fake: scaffold gap size wrong estimation (local) 62828590 62829178 101278 100690 NC_000014.9 velvet.5620 100.0 True fake: scaffold gap size wrong estimation (local) 62820984 62828377 110286 102008 NC_000014.9 velvet.5620 99.88 True fake: scaffold gap size wrong estimation (local) 62819255 62820334 111998 110919 NC_000014.9 velvet.5620 100.0 True fake: scaffold gap size wrong estimation (extensive) 62809566 62810405 129149 128310 NC_000014.9 velvet.5620 100.0 True relocation, scaffold gap is present, inconsistency = -7505 62814802 62817053 131418 129167 NC_000014.9 velvet.5620 99.78 True fake: scaffold gap size wrong estimation (local) 62810504 62814568 136533 132470 NC_000014.9 velvet.5620 99.8 True inversion, scaffold gap is present 62817743 62818981 136544 137774 NC_000014.9 velvet.5620 99.11 True relocation, scaffold gap is present, inconsistency = 7589 62808717 62809231 139211 138697 NC_000014.9 velvet.5620 97.86 True local misassembly 62807335 62808574 140451 139212 NC_000014.9 velvet.5620 99.11 True fake: scaffold gap size wrong estimation (local) 62803116 62805957 145429 142588 NC_000014.9 velvet.5620 99.93 True fake: scaffold gap size wrong estimation (local) 62801500 62802880 147765 146385 NC_000014.9 velvet.5620 100.0 True relocation, scaffold gap is present, inconsistency = 54655 62858594 62868728 148824 159643 NC_000014.9 velvet.5620 99.22 True fake: scaffold gap size wrong estimation (local) 62869953 62872567 161549 164163 NC_000014.9 velvet.5620 100.0 True fake: scaffold gap size wrong estimation (local) 62873181 62874341 165681 166841 NC_000014.9 velvet.5620 100.0 True fake: scaffold gap size wrong estimation (local) 62884647 62889995 172229 177567 NC_000014.9 velvet.5620 99.64 True relocation, scaffold gap is present, inconsistency = 112208 62771600 62772428 178406 177578 NC_000014.9 velvet.5620 99.88 True fake: scaffold gap size wrong estimation (local) 62767333 62771342 183055 179047 NC_000014.9 velvet.5620 99.88 True relocation, scaffold gap is present, inconsistency = 117004 62891232 62893616 185941 188332 NC_000014.9 velvet.5620 97.75 True fake: scaffold gap size wrong estimation (local) 62895598 62899575 191064 195041 NC_000014.9 velvet.5620 99.95 True fake: scaffold gap size wrong estimation (local) 62899867 62901005 196089 197227 NC_000014.9 velvet.5620 100.0 True indel: indel (> 5bp) 62901051 62901584 197228 197761 NC_000014.9 velvet.5620 98.13 True fake: scaffold gap size wrong estimation (local) 62903015 62909059 200105 206200 NC_000014.9 velvet.5620 99.98 True fake: scaffold gap size wrong estimation (local) 62909348 62911293 207201 209217 NC_000014.9 velvet.5620 98.46 True fake: scaffold gap size wrong estimation (local) 62912716 62913260 211068 211612 NC_000014.9 velvet.5620 99.82 True fake: scaffold gap size wrong estimation (local) 62913530 62915950 212490 214910 NC_000014.9 velvet.5620 99.88 True fake: scaffold gap size wrong estimation (local) 62917386 62921787 217060 221461 NC_000014.9 velvet.5620 99.95 True indel: indel (> 5bp) 62921820 62923489 221462 223131 NC_000014.9 velvet.5620 99.4 True fake: scaffold gap size wrong estimation (local) 62923490 62930064 223898 230472 NC_000014.9 velvet.5620 99.39 True fake: scaffold gap size wrong estimation (local) 62930065 62934145 231607 235687 NC_000014.9 velvet.5620 99.88 True fake: scaffold gap size wrong estimation (local) 62934273 62936424 236601 238752 NC_000014.9 velvet.5620 99.95 True fake: scaffold gap size wrong estimation (local) 62937010 62939683 240072 242745 NC_000014.9 velvet.5620 100.0 True fake: scaffold gap size wrong estimation (local) 62939912 62947833 243803 251724 NC_000014.9 velvet.5620 99.97 True fake: scaffold gap size wrong estimation (local) 62949331 62951706 253916 256326 NC_000014.9 velvet.5620 99.66 True fake: scaffold gap size wrong estimation (local) 62951992 62969751 257356 276069 NC_000014.9 velvet.5620 98.88 True fake: scaffold gap size wrong estimation (local) 62970078 62976143 277252 283317 NC_000014.9 velvet.5620 100.0 True fake: scaffold gap size wrong estimation (local) 62976389 62978492 284249 286461 NC_000014.9 velvet.5620 100.0 True fake: scaffold gap size wrong estimation (local) 62978618 62980163 287139 288723 NC_000014.9 velvet.5620 97.17 True fake: scaffold gap size wrong estimation (local) 62980256 62982134 288878 290756 NC_000014.9 velvet.5620 99.95 True relocation, scaffold gap is present, inconsistency = 193850 62784106 62785908 293056 291254 NC_000014.9 velvet.5620 99.83 True fake: scaffold gap size wrong estimation (local) 62782790 62784011 295143 293922 NC_000014.9 velvet.5620 98.94 True fake: scaffold gap size wrong estimation (local) 62756782 62757366 321236 320652 NC_000014.9 velvet.5620 98.12 True indel: indel (> 5bp) 62756008 62756718 321947 321237 NC_000014.9 velvet.5620 99.72 True fake: scaffold gap size wrong estimation (local) 62754881 62756007 324110 322984 NC_000014.9 velvet.5620 98.94 True local misassembly 62752951 62754602 325762 324111 NC_000014.9 velvet.5620 99.7 True fake: scaffold gap size wrong estimation (local) 62747310 62750973 329509 325846 NC_000014.9 velvet.5620 99.86 True fake: scaffold gap size wrong estimation (local) 62742356 62747058 335226 330524 NC_000014.9 velvet.5620 100.0 True fake: scaffold gap size wrong estimation (local) 62736454 62742270 341262 335446 NC_000014.9 velvet.5620 99.98 True fake: scaffold gap size wrong estimation (local) 62731325 62736367 347186 342144 NC_000014.9 velvet.5620 99.96 True fake: scaffold gap size wrong estimation (local) 62728394 62731027 350894 348261 NC_000014.9 velvet.5620 99.96 True fake: scaffold gap size wrong estimation (local) 62727352 62728139 352409 351574 NC_000014.9 velvet.5620 100.0 True fake: scaffold gap size wrong estimation (local) 62720568 62727101 359711 353180 NC_000014.9 velvet.5620 99.74 True fake: scaffold gap size wrong estimation (local) 62714182 62720415 366604 360371 NC_000014.9 velvet.5620 99.86 True fake: scaffold gap size wrong estimation (local) 62709236 62713999 372367 367608 NC_000014.9 velvet.5620 99.6 True fake: scaffold gap size wrong estimation (local) 62698448 62708959 384217 373456 NC_000014.9 velvet.5620 99.91 True fake: scaffold gap size wrong estimation (local) 62694842 62698172 388604 385274 NC_000014.9 velvet.5620 100.0 True fake: scaffold gap size wrong estimation (local) 62686846 62694561 397430 389715 NC_000014.9 velvet.5620 99.91 True fake: scaffold gap size wrong estimation (local) 62683916 62686629 401082 398369 NC_000014.9 velvet.5620 100.0 True fake: scaffold gap size wrong estimation (local) 62679642 62681971 403422 401093 NC_000014.9 velvet.5620 100.0 True indel: indel (<= 5bp) 62676868 62679641 406198 403425 NC_000014.9 velvet.5620 99.93 True fake: scaffold gap size wrong estimation (local) 62673700 62676867 411042 407875 NC_000014.9 velvet.5620 99.4 True indel: stretch of mismatches 62671897 62673598 412845 411144 NC_000014.9 velvet.5620 99.94 True fake: scaffold gap size wrong estimation (local) 62666397 62671798 418463 413059 NC_000014.9 velvet.5620 99.87 True fake: scaffold gap size wrong estimation (local) 62664063 62666151 421545 419455 NC_000014.9 velvet.5620 99.81 True fake: scaffold gap size wrong estimation (local) 62654253 62663788 432886 422542 NC_000014.9 velvet.5620 99.79 True fake: scaffold gap size wrong estimation (local) 62642972 62653975 445089 433915 NC_000014.9 velvet.5620 99.68 True fake: scaffold gap size wrong estimation (local) 62627403 62633047 458061 451682 NC_000014.9 velvet.5620 99.71 True fake: scaffold gap size wrong estimation (local) 62625890 62627237 459748 458401 NC_000014.9 velvet.5620 100.0 True fake: scaffold gap size wrong estimation (local) 62623857 62625613 462467 460671 NC_000014.9 velvet.5620 99.48 True fake: scaffold gap size wrong estimation (local) 62615773 62618688 471627 468622 NC_000014.9 velvet.5620 99.62 True relocation, scaffold gap is present, inconsistency = 10000200 52607943 52612662 479257 474538 NC_000014.9 velvet.5620 99.96 True fake: scaffold gap size wrong estimation (local) 52604706 52607598 483204 480360 NC_000014.9 velvet.5620 98.23 True relocation, scaffold gap is present, inconsistency = 13651795 38949566 38952178 483937 486549 NC_000014.9 velvet.5620 99.89 True relocation, scaffold gap is present, inconsistency = 23649966 62602155 62609517 493930 486560 NC_000014.9 velvet.5620 99.9 True relocation, scaffold gap is present, inconsistency = 7096355 55502372 55504280 495450 497358 NC_000014.9 velvet.5620 99.95 True inversion, scaffold gap is present 55498181 55499148 499165 498198 NC_000014.9 velvet.5620 99.9 True inversion, scaffold gap is present 55499794 55501340 500026 501572 NC_000014.9 velvet.5620 99.94 True fake: scaffold gap size wrong estimation (local) 55504888 55507693 501837 504743 NC_000014.9 velvet.5620 99.96 True inversion, scaffold gap is present 55496699 55497908 506331 505122 NC_000014.9 velvet.5620 100.0 True relocation, scaffold gap is present, inconsistency = -7107470 62596974 62601375 513475 509125 NC_000014.9 velvet.5620 98.73 True fake: scaffold gap size wrong estimation (local) 62586801 62596853 524649 514338 NC_000014.9 velvet.5620 99.97 True fake: scaffold gap size wrong estimation (local) 62584947 62586508 527084 525523 NC_000014.9 velvet.5620 100.0 True fake: scaffold gap size wrong estimation (local) 62582927 62584681 529553 527799 NC_000014.9 velvet.5620 100.0 True fake: scaffold gap size wrong estimation (local) 62577178 62582697 535953 530460 NC_000014.9 velvet.5620 99.23 True relocation, scaffold gap is present, inconsistency = 11922613 50653023 50653618 536900 537495 NC_000014.9 velvet.5620 100.0 True local misassembly 50653873 50654661 537496 538284 NC_000014.9 velvet.5620 98.61 True fake: scaffold gap size wrong estimation (local) 50657306 50659601 541952 544245 NC_000014.9 velvet.5620 99.74 True fake: scaffold gap size wrong estimation (local) 50659855 50662181 545232 547588 NC_000014.9 velvet.5620 98.89 True fake: scaffold gap size wrong estimation (local) 50662472 50666648 548638 552814 NC_000014.9 velvet.5620 99.88 True fake: scaffold gap size wrong estimation (local) 50666797 50668045 558554 559802 NC_000014.9 velvet.5620 98.72 True fake: scaffold gap size wrong estimation (local) 50668429 50670755 561104 563428 NC_000014.9 velvet.5620 99.7 True fake: scaffold gap size wrong estimation (local) 50670899 50671606 564290 564997 NC_000014.9 velvet.5620 99.86 True fake: scaffold gap size wrong estimation (local) 50673236 50674936 567331 569031 NC_000014.9 velvet.5620 100.0 True fake: scaffold gap size wrong estimation (local) 50675193 50677290 570013 572110 NC_000014.9 velvet.5620 99.95 True relocation, scaffold gap is present, inconsistency = 11576571 39096533 39097806 574199 572926 NC_000014.9 velvet.5620 100.0 True fake: scaffold gap size wrong estimation (local) 39095559 39096248 576078 575389 NC_000014.9 velvet.5620 98.26 True local misassembly 39094535 39095277 576821 576079 NC_000014.9 velvet.5620 100.0 True fake: scaffold gap size wrong estimation (local) 39093137 39094235 578422 577325 NC_000014.9 velvet.5620 99.64 True fake: scaffold gap size wrong estimation (local) 39089928 39092851 582262 579339 NC_000014.9 velvet.5620 99.97 True fake: scaffold gap size wrong estimation (local) 39089167 39089695 583416 582888 NC_000014.9 velvet.5620 100.0 True fake: scaffold gap size wrong estimation (local) 39081198 39083205 586602 584595 NC_000014.9 velvet.5620 99.5 True local misassembly 39080680 39081197 587312 586795 NC_000014.9 velvet.5620 98.46 True fake: scaffold gap size wrong estimation (local) 39079827 39080412 589020 588435 NC_000014.9 velvet.5620 100.0 True fake: scaffold gap size wrong estimation (local) 39077877 39079537 590767 589110 NC_000014.9 velvet.5620 99.76 True fake: scaffold gap size wrong estimation (local) 39075069 39076419 594369 593019 NC_000014.9 velvet.5620 100.0 True fake: scaffold gap size wrong estimation (local) 39073885 39074819 595507 594573 NC_000014.9 velvet.5620 99.89 True fake: scaffold gap size wrong estimation (local) 39072703 39073311 597673 597065 NC_000014.9 velvet.5620 98.36 True fake: scaffold gap size wrong estimation (local) 39067708 39069482 602839 601065 NC_000014.9 velvet.5620 95.66 True indel: indel (> 5bp) 39066822 39067535 603683 602970 NC_000014.9 velvet.5620 98.6 True fake: scaffold gap size wrong estimation (local) 39063919 39065704 607327 605543 NC_000014.9 velvet.5620 99.72 True fake: scaffold gap size wrong estimation (local) 39058583 39063501 613517 608556 NC_000014.9 velvet.5620 99.94 True fake: scaffold gap size wrong estimation (local) 39057306 39058270 615589 614625 NC_000014.9 velvet.5620 100.0 True fake: scaffold gap size wrong estimation (local) 39038615 39041402 632807 630020 NC_000014.9 velvet.5620 99.93 True fake: scaffold gap size wrong estimation (local) 39036324 39038527 635223 633020 NC_000014.9 velvet.5620 99.95 True fake: scaffold gap size wrong estimation (local) 39031588 39036039 640753 636293 NC_000014.9 velvet.5620 99.8 True fake: scaffold gap size wrong estimation (local) 39024852 39031310 648110 641645 NC_000014.9 velvet.5620 99.94 True relocation, scaffold gap is present, inconsistency = -57326597 96348557 96351438 651047 648121 NC_000014.9 velvet.5620 99.89 True fake: scaffold gap size wrong estimation (local) 96343403 96348351 656944 651956 NC_000014.9 velvet.5620 98.7 True fake: scaffold gap size wrong estimation (local) 96342671 96343320 657728 657080 NC_000014.9 velvet.5620 99.85 True fake: scaffold gap size wrong estimation (local) 96340927 96342174 660230 658983 NC_000014.9 velvet.5620 100.0 True fake: scaffold gap size wrong estimation (local) 96339557 96340116 661791 661234 NC_000014.9 velvet.5620 99.64 True fake: not a misassembly (possible transposable element) 70842511 70844507 663994 661998 NC_000014.9 velvet.5620 100.0 True fake: not a misassembly (possible transposable element) 96332216 96337615 670606 665102 NC_000014.9 velvet.5620 99.98 True CONTIG velvet.5620 670606 misassembled CONTIG velvet.5639 298 unaligned 89073620 89074193 1 574 NC_000014.9 velvet.5640 100.0 True CONTIG velvet.5640 587 correct CONTIG velvet.5662 203 unaligned CONTIG velvet.5667 260 unaligned 74355143 74355651 10 518 NC_000014.9 velvet.5735 99.8 True CONTIG velvet.5735 518 correct CONTIG velvet.5738 470 unaligned CONTIG velvet.5752 300 unaligned CONTIG velvet.5753 231 unaligned 34546192 34546895 1 704 NC_000014.9 velvet.5767 99.43 True CONTIG velvet.5767 704 correct CONTIG velvet.5773 265 unaligned CONTIG velvet.5780 262 unaligned CONTIG velvet.5821 256 unaligned CONTIG velvet.5827 485 unaligned CONTIG velvet.5838 295 unaligned 19241348 19242151 804 1 NC_000014.9 velvet.5842 99.75 True CONTIG velvet.5842 804 correct CONTIG velvet.5854 360 unaligned 18989740 18990975 1236 1 NC_000014.9 velvet.5857 100.0 True CONTIG velvet.5857 1236 correct 95612198 95612826 629 1 NC_000014.9 velvet.5861 99.68 True CONTIG velvet.5861 629 correct CONTIG velvet.5864 373 unaligned CONTIG velvet.5866 295 unaligned CONTIG velvet.5869 255 unaligned 18935824 18936728 1 905 NC_000014.9 velvet.5883 100.0 True CONTIG velvet.5883 905 correct CONTIG velvet.5886 297 unaligned CONTIG velvet.5889 235 unaligned 105660524 105661321 1 798 NC_000014.9 velvet.5892 99.87 True CONTIG velvet.5892 798 correct 55345054 55345584 1 531 NC_000014.9 velvet.5898 99.81 True CONTIG velvet.5898 531 correct CONTIG velvet.5904 225 unaligned CONTIG velvet.5905 227 unaligned CONTIG velvet.5916 210 unaligned CONTIG velvet.5924 243 unaligned CONTIG velvet.5943 383 unaligned CONTIG velvet.5956 219 unaligned CONTIG velvet.5958 216 unaligned 102791318 102791824 1378 1884 NC_000014.9 velvet.5966 100.0 True CONTIG velvet.5966 2648 correct_unaligned CONTIG velvet.5969 350 unaligned CONTIG velvet.5978 335 unaligned CONTIG velvet.6010 232 unaligned CONTIG velvet.6025 3834 unaligned 105616980 105617620 1 641 NC_000014.9 velvet.6043 99.69 True CONTIG velvet.6043 641 correct 46478997 46485731 1 6740 NC_000014.9 velvet.6046 99.82 True CONTIG velvet.6046 6740 correct 102189167 102190303 1137 1 NC_000014.9 velvet.6084 100.0 True CONTIG velvet.6084 1137 correct CONTIG velvet.6091 212 unaligned CONTIG velvet.6122 223 unaligned CONTIG velvet.6149 201 unaligned CONTIG velvet.6185 364 unaligned CONTIG velvet.6186 277 unaligned CONTIG velvet.6188 262 unaligned CONTIG velvet.6189 235 unaligned CONTIG velvet.6194 470 unaligned 35456297 35456957 1 661 NC_000014.9 velvet.6197 100.0 True CONTIG velvet.6197 661 correct CONTIG velvet.6219 223 unaligned CONTIG velvet.6224 319 unaligned CONTIG velvet.6230 336 unaligned 56934633 56935188 1 555 NC_000014.9 velvet.6284 99.82 True CONTIG velvet.6284 555 correct CONTIG velvet.6299 236 unaligned CONTIG velvet.6308 292 unaligned 71975724 71976287 1 564 NC_000014.9 velvet.6310 99.82 True CONTIG velvet.6310 564 correct 18959000 18959589 590 1 NC_000014.9 velvet.6312 99.83 True CONTIG velvet.6312 590 correct 74925836 74926369 1 534 NC_000014.9 velvet.6314 100.0 True CONTIG velvet.6314 534 correct CONTIG velvet.6374 207 unaligned CONTIG velvet.6375 268 unaligned CONTIG velvet.6388 392 unaligned CONTIG velvet.6406 339 unaligned 41716059 41727411 2286 13793 NC_000014.9 velvet.6420 99.8 True fake: scaffold gap size wrong estimation (local) 41727500 41734035 14654 21177 NC_000014.9 velvet.6420 99.82 True fake: scaffold gap size wrong estimation (local) 41734365 41735749 22334 23718 NC_000014.9 velvet.6420 100.0 True fake: scaffold gap size wrong estimation (local) 41747369 41749556 30918 33105 NC_000014.9 velvet.6420 99.91 True fake: scaffold gap size wrong estimation (local) 41750302 41750873 35922 36493 NC_000014.9 velvet.6420 98.25 True relocation, scaffold gap is present, inconsistency = -14292 41738507 41747341 38419 47452 NC_000014.9 velvet.6420 99.83 True inversion, scaffold gap is present 41757670 41763820 60386 53927 NC_000014.9 velvet.6420 99.79 True relocation, scaffold gap is present, inconsistency = 39268 41714788 41715740 64000 63048 NC_000014.9 velvet.6420 100.0 True fake: scaffold gap size wrong estimation (local) 41710853 41714624 69019 64385 NC_000014.9 velvet.6420 96.3 True fake: scaffold gap size wrong estimation (local) 41706370 41710631 74234 69893 NC_000014.9 velvet.6420 100.0 True fake: scaffold gap size wrong estimation (local) 41692659 41706097 88855 75295 NC_000014.9 velvet.6420 99.99 True fake: scaffold gap size wrong estimation (local) 41689898 41692410 92472 89930 NC_000014.9 velvet.6420 98.62 True fake: scaffold gap size wrong estimation (local) 41687771 41689610 95321 93443 NC_000014.9 velvet.6420 99.95 True CONTIG velvet.6420 95321 misassembled CONTIG velvet.6432 205 unaligned CONTIG velvet.6438 302 unaligned CONTIG velvet.6453 252 unaligned CONTIG velvet.6463 452 unaligned CONTIG velvet.6467 471 unaligned CONTIG velvet.6490 368 unaligned CONTIG velvet.6500 354 unaligned CONTIG velvet.6519 303 unaligned 106270781 106271413 1 632 NC_000014.9 velvet.6524 99.37 True CONTIG velvet.6524 632 correct 19327937 19328557 621 1 NC_000014.9 velvet.6528 99.84 True CONTIG velvet.6528 621 correct 19644143 19644784 1 642 NC_000014.9 velvet.6545 99.84 True CONTIG velvet.6545 642 correct CONTIG velvet.6559 207 unaligned 97799323 97801155 1833 1 NC_000014.9 velvet.6578 99.78 True CONTIG velvet.6578 1859 correct CONTIG velvet.6583 300 unaligned CONTIG velvet.6593 311 unaligned 102920170 102921354 1 1185 NC_000014.9 velvet.6603 100.0 True CONTIG velvet.6603 1185 correct 19682677 19683362 1 686 NC_000014.9 velvet.6604 100.0 True CONTIG velvet.6604 686 correct CONTIG velvet.6616 246 unaligned 19074189 19075388 1200 1 NC_000014.9 velvet.6655 100.0 True CONTIG velvet.6655 1200 correct 89739109 89740858 2638 4387 NC_000014.9 velvet.6674 99.83 True CONTIG velvet.6674 4387 correct CONTIG velvet.6677 327 unaligned CONTIG velvet.6682 430 unaligned CONTIG velvet.6729 296 unaligned CONTIG velvet.6751 288 unaligned CONTIG velvet.6782 521 unaligned CONTIG velvet.6805 290 unaligned CONTIG velvet.6806 252 unaligned CONTIG velvet.6828 294 unaligned CONTIG velvet.6844 434 unaligned CONTIG velvet.6860 300 unaligned 54499471 54500612 1522 381 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 54492643 54493412 8865 8096 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 54489125 54491220 12990 10900 NC_000014.9 velvet.6890 99.76 True fake: scaffold gap size wrong estimation (local) 54461695 54462486 39886 39095 NC_000014.9 velvet.6890 98.74 True fake: scaffold gap size wrong estimation (local) 54458722 54459539 43276 42460 NC_000014.9 velvet.6890 99.14 True fake: scaffold gap size wrong estimation (local) 54457075 54458519 44869 43399 NC_000014.9 velvet.6890 97.43 True fake: scaffold gap size wrong estimation (local) 54455308 54456745 47183 45746 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 54454142 54455035 48600 47707 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 54451818 54452541 51545 50822 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 54447940 54451621 56127 52446 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 54443492 54447674 61411 57157 NC_000014.9 velvet.6890 98.43 True fake: not a misassembly (possible transposable element) 75221493 75222978 65843 64358 NC_000014.9 velvet.6890 100.0 True fake: not a misassembly (possible transposable element) 54439821 54442789 69513 66545 NC_000014.9 velvet.6890 100.0 True fake: not a misassembly (possible transposable element) 95354823 95358943 69524 73643 NC_000014.9 velvet.6890 99.85 True fake: not a misassembly (possible transposable element) 54438245 54439555 74964 73654 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 54400248 54401856 107929 106322 NC_000014.9 velvet.6890 99.94 True fake: scaffold gap size wrong estimation (local) 54399191 54400162 110248 109277 NC_000014.9 velvet.6890 98.97 True local misassembly 54398090 54398974 111133 110249 NC_000014.9 velvet.6890 100.0 True relocation, scaffold gap is present, inconsistency = -23029 54419159 54421108 113093 111144 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 54414807 54418908 118926 114040 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (extensive) 54371485 54372675 154127 152885 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 54361924 54371310 164522 154934 NC_000014.9 velvet.6890 99.99 True fake: scaffold gap size wrong estimation (local) 54358145 54358934 165322 164533 NC_000014.9 velvet.6890 100.0 True local misassembly 54360254 54361677 166756 165333 NC_000014.9 velvet.6890 99.93 True fake: scaffold gap size wrong estimation (local) 54358955 54359990 168211 167176 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 54352824 54358059 174287 168222 NC_000014.9 velvet.6890 99.94 True relocation, scaffold gap is present, inconsistency = 4953801 59322535 59323789 184962 186216 NC_000014.9 velvet.6890 99.92 True relocation, scaffold gap is present, inconsistency = 4970139 54346114 54350714 192498 187898 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 54342416 54345962 196972 193416 NC_000014.9 velvet.6890 98.68 True fake: scaffold gap size wrong estimation (local) 54339677 54342161 200450 197912 NC_000014.9 velvet.6890 100.0 True fake: not a misassembly (possible transposable element) 49317895 49318795 209279 208379 NC_000014.9 velvet.6890 98.78 True fake: not a misassembly (possible transposable element) 54330608 54336698 215862 209705 NC_000014.9 velvet.6890 98.61 True fake: scaffold gap size wrong estimation (local) 54324600 54330343 223474 216929 NC_000014.9 velvet.6890 99.27 True fake: scaffold gap size wrong estimation (local) 54322118 54323618 226735 225235 NC_000014.9 velvet.6890 99.93 True fake: scaffold gap size wrong estimation (local) 54320369 54321449 229104 228026 NC_000014.9 velvet.6890 99.63 True fake: scaffold gap size wrong estimation (local) 54318780 54320102 231360 230038 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 54287225 54303137 256424 240445 NC_000014.9 velvet.6890 99.92 True fake: scaffold gap size wrong estimation (local) 54266545 54273754 278772 271439 NC_000014.9 velvet.6890 99.8 True fake: not a misassembly (possible transposable element) 49242179 49243693 280341 278827 NC_000014.9 velvet.6890 100.0 True fake: not a misassembly (possible transposable element) 54248083 54260910 293181 280352 NC_000014.9 velvet.6890 99.89 True relocation, scaffold gap is present, inconsistency = -30321866 84557644 84561787 305389 301343 NC_000014.9 velvet.6890 97.17 True fake: scaffold gap size wrong estimation (local) 84553394 84557508 310627 306501 NC_000014.9 velvet.6890 98.8 True fake: scaffold gap size wrong estimation (local) 84550454 84553140 314355 311666 NC_000014.9 velvet.6890 99.7 True fake: scaffold gap size wrong estimation (local) 84522227 84549744 345594 315819 NC_000014.9 velvet.6890 99.65 True fake: scaffold gap size wrong estimation (local) 84514472 84521979 355699 346534 NC_000014.9 velvet.6890 95.59 True fake: scaffold gap size wrong estimation (local) 84513445 84514096 356363 355710 NC_000014.9 velvet.6890 99.54 True fake: scaffold gap size wrong estimation (local) 84509789 84510604 363412 362597 NC_000014.9 velvet.6890 99.51 True fake: scaffold gap size wrong estimation (local) 84507332 84508194 366739 365877 NC_000014.9 velvet.6890 99.77 True fake: scaffold gap size wrong estimation (local) 84496354 84500278 379082 375197 NC_000014.9 velvet.6890 98.9 True fake: scaffold gap size wrong estimation (local) 84493928 84496180 382362 380072 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 84487363 84488707 383717 382373 NC_000014.9 velvet.6890 99.93 True fake: scaffold gap size wrong estimation (local) 84486269 84487013 385353 384623 NC_000014.9 velvet.6890 97.96 True relocation, scaffold gap is present, inconsistency = 50691662 33789864 33794596 390967 385364 NC_000014.9 velvet.6890 98.92 True relocation, scaffold gap is present, inconsistency = -15453998 49239084 49239623 395745 395206 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 49237346 49237963 396933 396316 NC_000014.9 velvet.6890 100.0 True local misassembly 49237966 49238813 397791 396944 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 49236032 49236824 399462 398670 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 49213302 49223271 416024 406059 NC_000014.9 velvet.6890 99.94 True fake: scaffold gap size wrong estimation (local) 49208163 49213173 421966 416956 NC_000014.9 velvet.6890 99.62 True fake: scaffold gap size wrong estimation (local) 49206872 49208162 423358 422068 NC_000014.9 velvet.6890 98.37 True fake: scaffold gap size wrong estimation (local) 49206312 49206871 424052 423493 NC_000014.9 velvet.6890 100.0 True indel: indel (> 5bp) 49202211 49206081 428166 424296 NC_000014.9 velvet.6890 99.56 True local misassembly 49197047 49198214 429334 428167 NC_000014.9 velvet.6890 98.46 True fake: scaffold gap size wrong estimation (local) 49189247 49197046 437332 429533 NC_000014.9 velvet.6890 99.88 True fake: scaffold gap size wrong estimation (local) 49158922 49161520 465612 463014 NC_000014.9 velvet.6890 99.85 True fake: scaffold gap size wrong estimation (local) 49155946 49158096 469254 467166 NC_000014.9 velvet.6890 96.62 True fake: scaffold gap size wrong estimation (local) 49153835 49155593 471942 470184 NC_000014.9 velvet.6890 99.83 True fake: scaffold gap size wrong estimation (local) 49120768 49123707 501552 498613 NC_000014.9 velvet.6890 100.0 True relocation, scaffold gap is present, inconsistency = -8745 49125154 49125875 505911 505190 NC_000014.9 velvet.6890 97.37 True fake: scaffold gap size wrong estimation (local) 49124529 49125153 506589 505965 NC_000014.9 velvet.6890 99.68 True fake: scaffold gap size wrong estimation (local) 49120084 49120747 513078 512415 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 49110694 49119497 523789 514219 NC_000014.9 velvet.6890 99.34 True fake: scaffold gap size wrong estimation (local) 49108862 49110360 526279 524781 NC_000014.9 velvet.6890 99.8 True fake: scaffold gap size wrong estimation (local) 49102736 49108692 533016 527060 NC_000014.9 velvet.6890 99.92 True fake: scaffold gap size wrong estimation (local) 49094446 49096714 538852 536584 NC_000014.9 velvet.6890 99.82 True fake: scaffold gap size wrong estimation (local) 49086550 49093645 548250 540392 NC_000014.9 velvet.6890 99.93 True fake: scaffold gap size wrong estimation (local) 49075512 49085576 561712 550077 NC_000014.9 velvet.6890 99.35 True fake: scaffold gap size wrong estimation (local) 49069325 49074078 568596 563841 NC_000014.9 velvet.6890 99.58 True fake: scaffold gap size wrong estimation (local) 49040023 49062506 596837 574330 NC_000014.9 velvet.6890 99.85 True fake: scaffold gap size wrong estimation (local) 49035120 49039750 602510 597880 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 49029745 49031889 604665 602521 NC_000014.9 velvet.6890 99.91 True local misassembly 49032248 49034809 607222 604666 NC_000014.9 velvet.6890 99.65 True fake: scaffold gap size wrong estimation (local) 49028052 49029707 608888 607233 NC_000014.9 velvet.6890 99.82 True fake: scaffold gap size wrong estimation (local) 49026778 49027598 610306 609491 NC_000014.9 velvet.6890 98.17 True fake: scaffold gap size wrong estimation (local) 49024303 49026209 613537 611487 NC_000014.9 velvet.6890 95.63 True fake: scaffold gap size wrong estimation (local) 49023436 49024105 614548 613879 NC_000014.9 velvet.6890 99.7 True fake: scaffold gap size wrong estimation (local) 49015248 49020564 620943 615517 NC_000014.9 velvet.6890 99.89 True fake: scaffold gap size wrong estimation (local) 49003135 49015166 633146 621115 NC_000014.9 velvet.6890 99.89 True fake: scaffold gap size wrong estimation (local) 48978705 49002837 659069 634166 NC_000014.9 velvet.6890 99.79 True fake: scaffold gap size wrong estimation (local) 48957152 48977083 682177 661313 NC_000014.9 velvet.6890 99.82 True fake: scaffold gap size wrong estimation (local) 48942334 48945227 694529 691582 NC_000014.9 velvet.6890 99.76 True fake: scaffold gap size wrong estimation (local) 48921384 48927549 714423 707279 NC_000014.9 velvet.6890 99.97 True fake: scaffold gap size wrong estimation (local) 48920402 48921070 716038 715370 NC_000014.9 velvet.6890 99.85 True fake: scaffold gap size wrong estimation (local) 48918503 48920227 718031 716356 NC_000014.9 velvet.6890 97.03 True relocation, scaffold gap is present, inconsistency = -21364091 70280770 70282268 719816 718357 NC_000014.9 velvet.6890 96.78 True relocation, scaffold gap is present, inconsistency = 34523255 35748853 35757116 720215 729495 NC_000014.9 velvet.6890 99.88 True fake: scaffold gap size wrong estimation (local) 35757423 35757993 730604 731174 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 35793525 35794227 760816 761518 NC_000014.9 velvet.6890 98.58 True fake: scaffold gap size wrong estimation (local) 35794746 35795726 763488 764468 NC_000014.9 velvet.6890 100.0 True local misassembly 35795908 35796815 764469 765376 NC_000014.9 velvet.6890 98.9 True fake: scaffold gap size wrong estimation (local) 35798451 35798964 767951 768505 NC_000014.9 velvet.6890 100.0 True relocation, scaffold gap is present, inconsistency = -18875 35780100 35782471 768516 770880 NC_000014.9 velvet.6890 99.66 True fake: scaffold gap size wrong estimation (local) 35783114 35784243 772497 773626 NC_000014.9 velvet.6890 99.91 True fake: scaffold gap size wrong estimation (local) 35784246 35785405 776065 777224 NC_000014.9 velvet.6890 99.91 True indel: indel (<= 5bp) 35785406 35785948 777229 777771 NC_000014.9 velvet.6890 98.9 True fake: scaffold gap size wrong estimation (local) 35786646 35787756 779172 780282 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 35788677 35789349 781499 782171 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 35810273 35811487 797092 798306 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 35812328 35812839 799186 799697 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 35814112 35814993 801541 802422 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 35815259 35817419 803642 805805 NC_000014.9 velvet.6890 99.95 True fake: scaffold gap size wrong estimation (local) 35818278 35818897 807192 807811 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 35819481 35823967 808750 813615 NC_000014.9 velvet.6890 99.77 True fake: scaffold gap size wrong estimation (local) 35825603 35828217 815610 818224 NC_000014.9 velvet.6890 99.96 True relocation, scaffold gap is present, inconsistency = 4848382 40680034 40681166 821659 822791 NC_000014.9 velvet.6890 99.91 True fake: scaffold gap size wrong estimation (local) 40681341 40692050 823495 834297 NC_000014.9 velvet.6890 99.85 True relocation, scaffold gap is present, inconsistency = -4844730 35850395 35852676 837372 839641 NC_000014.9 velvet.6890 99.47 True fake: scaffold gap size wrong estimation (local) 35853023 35853555 840184 840716 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 35853718 35856834 841607 844723 NC_000014.9 velvet.6890 99.9 True relocation, scaffold gap is present, inconsistency = 13056501 48917528 48918499 849887 848916 NC_000014.9 velvet.6890 99.58 True fake: scaffold gap size wrong estimation (local) 48911177 48917289 856886 850702 NC_000014.9 velvet.6890 98.32 True fake: scaffold gap size wrong estimation (local) 48903083 48910933 865881 857888 NC_000014.9 velvet.6890 99.27 True fake: scaffold gap size wrong estimation (local) 48889218 48902775 881665 866850 NC_000014.9 velvet.6890 99.99 True fake: scaffold gap size wrong estimation (local) 48887737 48888781 886131 885087 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 48886699 48887283 887043 886459 NC_000014.9 velvet.6890 99.83 True fake: scaffold gap size wrong estimation (local) 48883183 48886417 891580 888272 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 48879130 48881257 896486 894359 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 48873525 48878152 902838 898211 NC_000014.9 velvet.6890 99.98 True fake: scaffold gap size wrong estimation (local) 48871446 48872667 905597 904376 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 48867746 48871103 909940 906583 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 48852465 48862032 921702 912087 NC_000014.9 velvet.6890 99.97 True fake: scaffold gap size wrong estimation (local) 48850838 48852327 924012 922523 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 48847613 48850546 928000 924342 NC_000014.9 velvet.6890 98.32 True fake: not a misassembly (possible transposable element) 29971598 29972645 932605 931581 NC_000014.9 velvet.6890 97.4 True fake: not a misassembly (possible transposable element) 48834667 48840364 939226 933524 NC_000014.9 velvet.6890 99.98 True fake: not a misassembly (possible transposable element) 29952163 29955385 942459 939237 NC_000014.9 velvet.6890 100.0 True fake: not a misassembly (possible transposable element) 48831346 48833820 946250 943776 NC_000014.9 velvet.6890 99.84 True fake: scaffold gap size wrong estimation (local) 48830288 48831083 947896 947101 NC_000014.9 velvet.6890 99.87 True fake: scaffold gap size wrong estimation (local) 48825189 48829824 953461 948828 NC_000014.9 velvet.6890 99.74 True fake: scaffold gap size wrong estimation (local) 48824453 48825081 955206 954578 NC_000014.9 velvet.6890 98.41 True fake: scaffold gap size wrong estimation (local) 48822576 48823513 956839 955902 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 48818313 48822280 961802 957651 NC_000014.9 velvet.6890 98.3 True fake: scaffold gap size wrong estimation (local) 48816329 48816862 964635 964102 NC_000014.9 velvet.6890 97.75 True fake: scaffold gap size wrong estimation (local) 48814151 48816328 967644 965467 NC_000014.9 velvet.6890 97.29 True fake: scaffold gap size wrong estimation (local) 48812925 48814150 968949 967724 NC_000014.9 velvet.6890 99.76 True fake: scaffold gap size wrong estimation (local) 48786045 48786889 996826 995982 NC_000014.9 velvet.6890 99.76 True local misassembly 48786915 48792977 1003641 996837 NC_000014.9 velvet.6890 99.88 True fake: scaffold gap size wrong estimation (local) 48784429 48785978 1006891 1005342 NC_000014.9 velvet.6890 99.94 True relocation, scaffold gap is present, inconsistency = 5442590 43339968 43341828 1008784 1006902 NC_000014.9 velvet.6890 97.83 True relocation, scaffold gap is present, inconsistency = 13410786 29928077 29929171 1009889 1008795 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 29922343 29927086 1016391 1011530 NC_000014.9 velvet.6890 99.35 True fake: scaffold gap size wrong estimation (local) 29920069 29922068 1018766 1016775 NC_000014.9 velvet.6890 99.6 True fake: scaffold gap size wrong estimation (local) 29914983 29919776 1024596 1019803 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 29910279 29914552 1030138 1025865 NC_000014.9 velvet.6890 99.86 True fake: not a misassembly (possible transposable element) 43327789 43330062 1035092 1032819 NC_000014.9 velvet.6890 99.96 True fake: not a misassembly (possible transposable element) 29892439 29895049 1043433 1040823 NC_000014.9 velvet.6890 99.92 True relocation, scaffold gap is present, inconsistency = -13447519 43336215 43339946 1047175 1043445 NC_000014.9 velvet.6890 99.95 True fake: scaffold gap size wrong estimation (local) 43335092 43336014 1048755 1047833 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 43330340 43334513 1053965 1049792 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 43324343 43326433 1061737 1059647 NC_000014.9 velvet.6890 99.95 True fake: scaffold gap size wrong estimation (local) 43312713 43324065 1074417 1062785 NC_000014.9 velvet.6890 99.46 True relocation, inconsistency = 9139357 52463423 52464678 1074418 1075673 NC_000014.9 velvet.6890 100.0 True local misassembly 52462604 52463209 1075777 1076382 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 52465615 52466336 1079397 1080115 NC_000014.9 velvet.6890 99.31 True relocation, scaffold gap is present, inconsistency = -22588917 29881314 29883261 1084010 1085957 NC_000014.9 velvet.6890 100.0 True relocation, scaffold gap is present, inconsistency = -67061 29816211 29819434 1085968 1089258 NC_000014.9 velvet.6890 99.88 True fake: scaffold gap size wrong estimation (local) 29819733 29826191 1090321 1096779 NC_000014.9 velvet.6890 99.89 True fake: scaffold gap size wrong estimation (local) 29827051 29831466 1098171 1102605 NC_000014.9 velvet.6890 97.49 True fake: scaffold gap size wrong estimation (local) 29831676 29835591 1103534 1107449 NC_000014.9 velvet.6890 99.97 True fake: scaffold gap size wrong estimation (local) 29835873 29839705 1108544 1112377 NC_000014.9 velvet.6890 99.95 True relocation, scaffold gap is present, inconsistency = 13470126 43311028 43312697 1115243 1113574 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 43296555 43310749 1131650 1116213 NC_000014.9 velvet.6890 99.99 True fake: scaffold gap size wrong estimation (local) 43293466 43295248 1135347 1133565 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 43288455 43293255 1141275 1136502 NC_000014.9 velvet.6890 96.8 True fake: scaffold gap size wrong estimation (local) 43278931 43288218 1151987 1142292 NC_000014.9 velvet.6890 99.99 True fake: scaffold gap size wrong estimation (local) 43269756 43278772 1161852 1152836 NC_000014.9 velvet.6890 99.98 True fake: scaffold gap size wrong estimation (extensive) 43257832 43262061 1166864 1161863 NC_000014.9 velvet.6890 99.95 True relocation, scaffold gap is present, inconsistency = -14512 43268063 43269569 1171145 1169639 NC_000014.9 velvet.6890 99.93 True fake: scaffold gap size wrong estimation (local) 43246371 43253846 1188131 1180448 NC_000014.9 velvet.6890 98.83 True relocation, scaffold gap is present, inconsistency = -10409 43237282 43243020 1207626 1201891 NC_000014.9 velvet.6890 99.95 True fake: scaffold gap size wrong estimation (local) 43233114 43237071 1212594 1208619 NC_000014.9 velvet.6890 99.04 True fake: scaffold gap size wrong estimation (local) 43232029 43233008 1214555 1213532 NC_000014.9 velvet.6890 100.0 True relocation, scaffold gap is present, inconsistency = 14954068 58187347 58189806 1214826 1217284 NC_000014.9 velvet.6890 99.96 True fake: scaffold gap size wrong estimation (local) 58190813 58195249 1219059 1223569 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 58195532 58196385 1224672 1225514 NC_000014.9 velvet.6890 98.7 True relocation, scaffold gap is present, inconsistency = -16203 58182563 58184818 1227895 1230150 NC_000014.9 velvet.6890 99.96 True fake: scaffold gap size wrong estimation (local) 58185106 58187061 1231292 1233247 NC_000014.9 velvet.6890 99.9 True relocation, scaffold gap is present, inconsistency = 20578 58213119 58213918 1238727 1239526 NC_000014.9 velvet.6890 100.0 True local misassembly 58208729 58210381 1239537 1241189 NC_000014.9 velvet.6890 100.0 True local misassembly 58210965 58211850 1241190 1242075 NC_000014.9 velvet.6890 98.65 True fake: scaffold gap size wrong estimation (local) 58215112 58215988 1242320 1243196 NC_000014.9 velvet.6890 100.0 True relocation, scaffold gap is present, inconsistency = -8084 58212003 58212903 1247295 1248195 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 58216373 58217420 1248401 1249448 NC_000014.9 velvet.6890 99.81 True local misassembly 58217677 58218852 1249449 1250624 NC_000014.9 velvet.6890 96.85 True fake: scaffold gap size wrong estimation (local) 58219123 58221047 1251906 1253833 NC_000014.9 velvet.6890 99.79 True relocation, scaffold gap is present, inconsistency = -62907 58161416 58163428 1257109 1259187 NC_000014.9 velvet.6890 97.98 True fake: scaffold gap size wrong estimation (local) 58163682 58165256 1259853 1261427 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 58165475 58170349 1262302 1267176 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 58170588 58172176 1268204 1269792 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 58172297 58173034 1269950 1270687 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 58173872 58175280 1272292 1273700 NC_000014.9 velvet.6890 98.01 True fake: scaffold gap size wrong estimation (local) 58176296 58178091 1275578 1277371 NC_000014.9 velvet.6890 99.44 True fake: scaffold gap size wrong estimation (local) 58179472 58180735 1279519 1280782 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (extensive) 58196395 58197082 1288836 1289515 NC_000014.9 velvet.6890 98.82 True fake: scaffold gap size wrong estimation (local) 58198204 58198927 1291103 1291822 NC_000014.9 velvet.6890 99.45 True fake: scaffold gap size wrong estimation (local) 58199025 58201983 1292508 1295541 NC_000014.9 velvet.6890 99.97 True fake: scaffold gap size wrong estimation (local) 58203331 58204146 1297613 1298428 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 58206481 58207041 1301588 1302148 NC_000014.9 velvet.6890 99.82 True fake: scaffold gap size wrong estimation (local) 58207618 58208722 1302434 1303538 NC_000014.9 velvet.6890 99.1 True relocation, scaffold gap is present, inconsistency = 15005938 43191401 43192060 1313811 1313158 NC_000014.9 velvet.6890 99.08 True fake: scaffold gap size wrong estimation (local) 43187208 43190341 1317996 1314854 NC_000014.9 velvet.6890 99.97 True relocation, scaffold gap is present, inconsistency = -30372 43196401 43217123 1340151 1318453 NC_000014.9 velvet.6890 99.32 True local misassembly 43194885 43196373 1341777 1340289 NC_000014.9 velvet.6890 99.53 True fake: scaffold gap size wrong estimation (local) 43193311 43194239 1343883 1342992 NC_000014.9 velvet.6890 95.22 True fake: scaffold gap size wrong estimation (local) 43190403 43190944 1347433 1346893 NC_000014.9 velvet.6890 99.82 True fake: scaffold gap size wrong estimation (local) 43182508 43187192 1352760 1347444 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 43180642 43182290 1355143 1353495 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 43157218 43180356 1379428 1356104 NC_000014.9 velvet.6890 99.94 True fake: scaffold gap size wrong estimation (local) 43155338 43156918 1382113 1380533 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 43144322 43154136 1393866 1384052 NC_000014.9 velvet.6890 99.99 True fake: scaffold gap size wrong estimation (local) 43135579 43138367 1398111 1395372 NC_000014.9 velvet.6890 95.71 True fake: scaffold gap size wrong estimation (local) 43133983 43135290 1399582 1398275 NC_000014.9 velvet.6890 99.69 True fake: scaffold gap size wrong estimation (local) 43129091 43133636 1405520 1399993 NC_000014.9 velvet.6890 98.27 True fake: scaffold gap size wrong estimation (local) 43118676 43127741 1417189 1406761 NC_000014.9 velvet.6890 98.55 True fake: scaffold gap size wrong estimation (local) 43107787 43118492 1429050 1417823 NC_000014.9 velvet.6890 99.75 True fake: scaffold gap size wrong estimation (local) 43098537 43107539 1439461 1429729 NC_000014.9 velvet.6890 99.84 True fake: scaffold gap size wrong estimation (local) 43097605 43098299 1440879 1440185 NC_000014.9 velvet.6890 99.86 True fake: scaffold gap size wrong estimation (local) 43095352 43097479 1443505 1441379 NC_000014.9 velvet.6890 99.86 True fake: scaffold gap size wrong estimation (local) 43091853 43093610 1448017 1446276 NC_000014.9 velvet.6890 98.34 True fake: scaffold gap size wrong estimation (local) 43090214 43091668 1449849 1448395 NC_000014.9 velvet.6890 99.73 True fake: scaffold gap size wrong estimation (local) 43087339 43089981 1453658 1451040 NC_000014.9 velvet.6890 98.9 True fake: scaffold gap size wrong estimation (local) 43078586 43087051 1463049 1454726 NC_000014.9 velvet.6890 98.19 True fake: scaffold gap size wrong estimation (local) 43068335 43074402 1471519 1464705 NC_000014.9 velvet.6890 99.53 True fake: scaffold gap size wrong estimation (local) 43056841 43058294 1482862 1481412 NC_000014.9 velvet.6890 99.52 True local misassembly 43060819 43062333 1484391 1482943 NC_000014.9 velvet.6890 95.25 True fake: scaffold gap size wrong estimation (local) 43058317 43060517 1487746 1485539 NC_000014.9 velvet.6890 99.82 True fake: scaffold gap size wrong estimation (local) 43053525 43056825 1493301 1490006 NC_000014.9 velvet.6890 99.7 True fake: scaffold gap size wrong estimation (local) 43052149 43053392 1495258 1494015 NC_000014.9 velvet.6890 99.12 True fake: scaffold gap size wrong estimation (local) 43050361 43051905 1497573 1496029 NC_000014.9 velvet.6890 99.94 True fake: scaffold gap size wrong estimation (local) 43041601 43050140 1507022 1498483 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 43033692 43041443 1515649 1507894 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 43022409 43033459 1528066 1516670 NC_000014.9 velvet.6890 96.06 True fake: scaffold gap size wrong estimation (local) 43018525 43022301 1532093 1528317 NC_000014.9 velvet.6890 100.0 True relocation, scaffold gap is present, inconsistency = 64642 42951656 42953872 1532104 1534320 NC_000014.9 velvet.6890 99.95 True inversion, scaffold gap is present 42950428 42950961 1535575 1535042 NC_000014.9 velvet.6890 97.94 True relocation, scaffold gap is present, inconsistency = 10563 42964669 42967553 1538720 1541604 NC_000014.9 velvet.6890 99.93 True relocation, scaffold gap is present, inconsistency = -8327 42959237 42964646 1541615 1547107 NC_000014.9 velvet.6890 99.91 True fake: scaffold gap size wrong estimation (local) 42973305 42977375 1558684 1562734 NC_000014.9 velvet.6890 99.31 True fake: scaffold gap size wrong estimation (local) 42977464 42979195 1563514 1565245 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 42979431 42984705 1566080 1571371 NC_000014.9 velvet.6890 99.08 True inversion, scaffold gap is present 42989998 42992046 1573429 1571382 NC_000014.9 velvet.6890 99.8 True fake: scaffold gap size wrong estimation (local) 42988654 42989707 1575751 1574698 NC_000014.9 velvet.6890 100.0 True fake: not a misassembly (possible transposable element) 42984711 42985240 1577934 1578451 NC_000014.9 velvet.6890 97.74 True fake: not a misassembly (possible transposable element) 42985219 42985839 1579082 1578462 NC_000014.9 velvet.6890 99.52 True inversion, scaffold gap is present 42985891 42987585 1579093 1580786 NC_000014.9 velvet.6890 99.71 True fake: scaffold gap size wrong estimation (local) 42992706 42997693 1583216 1589032 NC_000014.9 velvet.6890 99.58 True fake: scaffold gap size wrong estimation (local) 43000221 43015045 1592087 1606911 NC_000014.9 velvet.6890 99.99 True fake: scaffold gap size wrong estimation (local) 43015269 43016977 1607858 1609566 NC_000014.9 velvet.6890 100.0 True fake: scaffold gap size wrong estimation (local) 43017540 43018537 1610244 1611241 NC_000014.9 velvet.6890 99.9 True CONTIG velvet.6890 1611325 misassembled CONTIG velvet.6901 272 unaligned CONTIG velvet.6913 285 unaligned CONTIG velvet.6920 288 unaligned CONTIG velvet.6930 250 unaligned 19382363 19382939 577 1 NC_000014.9 velvet.6948 99.48 True CONTIG velvet.6948 577 correct CONTIG velvet.6950 246 unaligned CONTIG velvet.6968 275 unaligned CONTIG velvet.6976 330 unaligned CONTIG velvet.6982 201 unaligned CONTIG velvet.7013 424 unaligned 106788379 106789153 775 1 NC_000014.9 velvet.7015 99.87 True CONTIG velvet.7015 3808 correct CONTIG velvet.7024 252 unaligned CONTIG velvet.7032 361 unaligned 34158740 34159534 795 1 NC_000014.9 velvet.7068 100.0 True CONTIG velvet.7068 795 correct CONTIG velvet.7077 260 unaligned 25267341 25267916 578 1153 NC_000014.9 velvet.7089 99.65 True CONTIG velvet.7089 1153 correct 18303323 18306401 1 3080 NC_000014.9 velvet.7094 99.87 True CONTIG velvet.7094 3080 correct CONTIG velvet.7109 449 unaligned CONTIG velvet.7111 375 unaligned 45290881 45291513 636 4 NC_000014.9 velvet.7133 100.0 True CONTIG velvet.7133 636 correct 37798424 37801861 25573 29010 NC_000014.9 velvet.7149 99.94 True CONTIG velvet.7149 29010 correct CONTIG velvet.7151 225 unaligned 18632372 18633368 997 1 NC_000014.9 velvet.7172 99.9 True CONTIG velvet.7172 997 correct CONTIG velvet.7174 249 unaligned 70238550 70239499 4156 3207 NC_000014.9 velvet.7202 97.58 True CONTIG velvet.7202 4156 correct CONTIG velvet.7207 216 unaligned 46721819 46726471 1 4644 NC_000014.9 velvet.7228 99.79 True fake: scaffold gap size wrong estimation (local) 46727761 46733428 6659 12326 NC_000014.9 velvet.7228 99.98 True fake: scaffold gap size wrong estimation (local) 46733601 46734674 13138 14251 NC_000014.9 velvet.7228 100.0 True fake: scaffold gap size wrong estimation (local) 46734942 46735971 14642 15671 NC_000014.9 velvet.7228 99.81 True CONTIG velvet.7228 15671 correct CONTIG velvet.7239 430 unaligned 19249677 19250421 745 1 NC_000014.9 velvet.7267 98.79 True CONTIG velvet.7267 745 correct CONTIG velvet.7280 291 unaligned CONTIG velvet.7294 222 unaligned CONTIG velvet.7308 228 unaligned CONTIG velvet.7317 321 unaligned CONTIG velvet.7319 439 unaligned CONTIG velvet.7334 280 unaligned 19295152 19297388 1 2237 NC_000014.9 velvet.7377 99.73 True CONTIG velvet.7377 2237 correct 19479035 19481404 2370 1 NC_000014.9 velvet.7411 99.92 True CONTIG velvet.7411 2370 correct CONTIG velvet.7413 330 unaligned CONTIG velvet.7419 262 unaligned 106364904 106365707 1 804 NC_000014.9 velvet.7434 98.76 True fake: scaffold gap size wrong estimation (local) 106370046 106370791 7030 7775 NC_000014.9 velvet.7434 99.73 True CONTIG velvet.7434 7775 correct 70470820 70471427 1 608 NC_000014.9 velvet.7452 99.67 True CONTIG velvet.7452 608 correct CONTIG velvet.7462 378 unaligned CONTIG velvet.7488 371 unaligned 19381217 19382386 1170 1 NC_000014.9 velvet.7500 99.83 True CONTIG velvet.7500 1170 correct 31467530 31468063 1 534 NC_000014.9 velvet.7513 100.0 True CONTIG velvet.7513 534 correct 19181064 19182514 1451 1 NC_000014.9 velvet.7518 99.66 True CONTIG velvet.7518 1451 correct 73529379 73530077 699 1 NC_000014.9 velvet.7525 100.0 True CONTIG velvet.7525 699 correct CONTIG velvet.7527 233 unaligned CONTIG velvet.7548 318 unaligned CONTIG velvet.7562 362 unaligned CONTIG velvet.7591 565 unaligned 99274654 99275499 1 846 NC_000014.9 velvet.7609 100.0 True CONTIG velvet.7609 846 correct CONTIG velvet.7610 249 unaligned 65924826 65925335 510 1 NC_000014.9 velvet.7619 99.8 True CONTIG velvet.7619 510 correct CONTIG velvet.7623 356 unaligned CONTIG velvet.7627 225 unaligned CONTIG velvet.7629 453 unaligned CONTIG velvet.7632 3708 unaligned CONTIG velvet.7640 216 unaligned CONTIG velvet.7643 210 unaligned CONTIG velvet.7644 378 unaligned 101570715 101571960 1 1246 NC_000014.9 velvet.7668 100.0 True CONTIG velvet.7668 1246 correct CONTIG velvet.7685 478 unaligned CONTIG velvet.7690 390 unaligned CONTIG velvet.7708 247 unaligned CONTIG velvet.7714 311 unaligned CONTIG velvet.7747 270 unaligned 44638207 44641801 1 4503 NC_000014.9 velvet.7749 99.97 True CONTIG velvet.7749 4503 correct CONTIG velvet.7758 349 unaligned 75305884 75306508 1 625 NC_000014.9 velvet.7766 100.0 True CONTIG velvet.7766 625 correct 85998786 86000670 1 1885 NC_000014.9 velvet.7786 99.89 True CONTIG velvet.7786 1905 correct CONTIG velvet.7813 249 unaligned 18328088 18329718 1631 1 NC_000014.9 velvet.7816 100.0 True CONTIG velvet.7816 1631 correct CONTIG velvet.7825 265 unaligned CONTIG velvet.7863 317 unaligned CONTIG velvet.7865 523 unaligned 18307937 18309073 1 1137 NC_000014.9 velvet.7873 100.0 True CONTIG velvet.7873 1137 correct CONTIG velvet.7898 287 unaligned CONTIG velvet.7911 303 unaligned CONTIG velvet.7914 202 unaligned CONTIG velvet.7922 319 unaligned CONTIG velvet.7942 280 unaligned 86884022 86885511 1 1492 NC_000014.9 velvet.7950 99.73 True CONTIG velvet.7950 1496 correct 55881331 55883708 1 2378 NC_000014.9 velvet.7955 99.96 True CONTIG velvet.7955 2379 correct CONTIG velvet.7963 406 unaligned CONTIG velvet.7992 256 unaligned 68857222 68858110 2 890 NC_000014.9 velvet.7998 99.55 True CONTIG velvet.7998 3995 correct CONTIG velvet.8001 431 unaligned 80329872 80333248 5413 2037 NC_000014.9 velvet.8003 99.94 True relocation, scaffold gap is present, inconsistency = 36506 80274535 80284178 14601 24307 NC_000014.9 velvet.8003 99.97 True fake: scaffold gap size wrong estimation (local) 80284745 80285815 25702 26772 NC_000014.9 velvet.8003 99.72 True fake: scaffold gap size wrong estimation (local) 80287807 80293912 29412 36286 NC_000014.9 velvet.8003 99.93 True fake: scaffold gap size wrong estimation (local) 80294191 80296200 37905 39914 NC_000014.9 velvet.8003 100.0 True fake: scaffold gap size wrong estimation (local) 80298285 80306128 42607 50607 NC_000014.9 velvet.8003 99.95 True fake: scaffold gap size wrong estimation (local) 80312779 80316001 51966 55188 NC_000014.9 velvet.8003 100.0 True relocation, scaffold gap is present, inconsistency = 14556 80335102 80335996 60627 59733 NC_000014.9 velvet.8003 100.0 True relocation, scaffold gap is present, inconsistency = 60893 80262896 80274198 72828 60638 NC_000014.9 velvet.8003 98.87 True fake: not a misassembly (possible transposable element) 80261968 80262644 73907 74583 NC_000014.9 velvet.8003 100.0 True fake: not a misassembly (possible transposable element) 80251012 80261924 85506 74594 NC_000014.9 velvet.8003 99.84 True fake: scaffold gap size wrong estimation (local) 80240272 80245675 93009 87606 NC_000014.9 velvet.8003 100.0 True fake: scaffold gap size wrong estimation (local) 80238080 80240032 95991 93991 NC_000014.9 velvet.8003 99.95 True fake: scaffold gap size wrong estimation (local) 80237055 80237871 97462 96647 NC_000014.9 velvet.8003 99.27 True fake: scaffold gap size wrong estimation (local) 80229239 80235804 106081 99309 NC_000014.9 velvet.8003 98.32 True fake: scaffold gap size wrong estimation (local) 80226817 80228033 109408 108143 NC_000014.9 velvet.8003 99.21 True fake: scaffold gap size wrong estimation (local) 80222973 80226471 112989 109566 NC_000014.9 velvet.8003 97.53 True fake: scaffold gap size wrong estimation (local) 80220205 80222844 116472 113833 NC_000014.9 velvet.8003 100.0 True fake: scaffold gap size wrong estimation (local) 80218966 80220029 118356 117295 NC_000014.9 velvet.8003 99.81 True fake: scaffold gap size wrong estimation (local) 80191657 80218714 148094 119035 NC_000014.9 velvet.8003 99.77 True fake: scaffold gap size wrong estimation (local) 80190937 80191463 149604 149078 NC_000014.9 velvet.8003 99.81 True fake: scaffold gap size wrong estimation (local) 80190008 80190674 150818 150152 NC_000014.9 velvet.8003 99.7 True fake: scaffold gap size wrong estimation (local) 80186990 80189877 154357 151379 NC_000014.9 velvet.8003 99.79 True fake: scaffold gap size wrong estimation (local) 80186171 80186732 155271 154710 NC_000014.9 velvet.8003 100.0 True fake: scaffold gap size wrong estimation (local) 80184489 80185911 157676 156254 NC_000014.9 velvet.8003 97.68 True fake: scaffold gap size wrong estimation (local) 80182869 80184488 159340 157721 NC_000014.9 velvet.8003 95.56 True fake: scaffold gap size wrong estimation (local) 80179975 80181065 161806 160716 NC_000014.9 velvet.8003 99.91 True fake: scaffold gap size wrong estimation (local) 80172201 80179731 171868 162893 NC_000014.9 velvet.8003 99.77 True fake: scaffold gap size wrong estimation (local) 80166505 80172065 178385 172762 NC_000014.9 velvet.8003 99.98 True fake: scaffold gap size wrong estimation (local) 80158176 80164826 187594 180944 NC_000014.9 velvet.8003 99.92 True fake: scaffold gap size wrong estimation (local) 80149751 80157905 197647 188628 NC_000014.9 velvet.8003 99.91 True inversion, scaffold gap is present 80147496 80149771 198861 201136 NC_000014.9 velvet.8003 100.0 True relocation, scaffold gap is present, inconsistency = 57225318 22895333 22899403 228030 223911 NC_000014.9 velvet.8003 98.35 True relocation, scaffold gap is present, inconsistency = -57225246 80113479 80120568 235317 228041 NC_000014.9 velvet.8003 98.81 True CONTIG velvet.8003 257165 misassembled CONTIG velvet.8007 264 unaligned CONTIG velvet.8009 291 unaligned CONTIG velvet.8010 225 unaligned CONTIG velvet.8016 225 unaligned 18709694 18711593 1900 1 NC_000014.9 velvet.8021 99.84 True CONTIG velvet.8021 1900 correct 19121582 19123202 1 1621 NC_000014.9 velvet.8022 99.69 True CONTIG velvet.8022 1621 correct CONTIG velvet.8036 445 unaligned 26061342 26062496 1 1155 NC_000014.9 velvet.8052 99.74 True CONTIG velvet.8052 1155 correct CONTIG velvet.8053 262 unaligned CONTIG velvet.8065 249 unaligned CONTIG velvet.8069 432 unaligned CONTIG velvet.8083 301 unaligned 88448869 88450557 1 1689 NC_000014.9 velvet.8088 99.76 True fake: scaffold gap size wrong estimation (local) 88451812 88454801 3953 6941 NC_000014.9 velvet.8088 99.73 True CONTIG velvet.8088 6941 correct 106404077 106404890 814 1 NC_000014.9 velvet.8098 99.02 True CONTIG velvet.8098 33592 correct CONTIG velvet.8104 307 unaligned CONTIG velvet.8113 360 unaligned CONTIG velvet.8126 233 unaligned CONTIG velvet.8128 295 unaligned CONTIG velvet.8159 244 unaligned CONTIG velvet.8169 231 unaligned CONTIG velvet.8186 443 unaligned 102057731 102058481 1 751 NC_000014.9 velvet.8210 100.0 True unknown 102056489 102057064 4206 4782 NC_000014.9 velvet.8210 98.96 True unknown CONTIG velvet.8210 15014 mis_unaligned 54161545 54162645 1 1101 NC_000014.9 velvet.8212 100.0 True CONTIG velvet.8212 1101 correct 57019774 57020843 1070 1 NC_000014.9 velvet.8283 99.72 True fake: scaffold gap size wrong estimation (local) 57017735 57019548 3492 1314 NC_000014.9 velvet.8283 99.71 True indel: indel (> 5bp) 57014998 57017672 6853 3605 NC_000014.9 velvet.8283 99.35 True fake: not a misassembly (possible transposable element) 56947128 56950378 8027 11273 NC_000014.9 velvet.8283 99.69 True fake: not a misassembly (possible transposable element) 57013821 57014978 12441 11284 NC_000014.9 velvet.8283 99.91 True relocation, scaffold gap is present, inconsistency = 59577 56952140 56952755 13930 14546 NC_000014.9 velvet.8283 99.84 True CONTIG velvet.8283 14548 misassembled 19709243 19710675 1 1433 NC_000014.9 velvet.8319 99.65 True CONTIG velvet.8319 1433 correct 52791779 52792899 1 1121 NC_000014.9 velvet.8320 100.0 True fake: scaffold gap size wrong estimation (local) 52793212 52793803 1335 1926 NC_000014.9 velvet.8320 100.0 True CONTIG velvet.8320 1926 correct 70714749 70715530 350 1131 NC_000014.9 velvet.8321 99.87 True CONTIG velvet.8321 1131 correct 35813175 35813912 1 738 NC_000014.9 velvet.8324 100.0 True CONTIG velvet.8324 738 correct CONTIG velvet.8391 241 unaligned CONTIG velvet.8414 312 unaligned CONTIG velvet.8423 554 unaligned CONTIG velvet.8437 215 unaligned CONTIG velvet.8443 282 unaligned CONTIG velvet.8477 428 unaligned 19104871 19105747 1 878 NC_000014.9 velvet.8495 99.66 True CONTIG velvet.8495 878 correct CONTIG velvet.8509 252 unaligned CONTIG velvet.8515 207 unaligned CONTIG velvet.8537 212 unaligned CONTIG velvet.8568 425 unaligned CONTIG velvet.8571 208 unaligned CONTIG velvet.8577 233 unaligned CONTIG velvet.8632 266 unaligned 45534696 45535485 653 1442 NC_000014.9 velvet.8637 98.48 True CONTIG velvet.8637 1527 correct CONTIG velvet.8647 202 unaligned CONTIG velvet.8667 201 unaligned CONTIG velvet.8670 433 unaligned CONTIG velvet.8676 236 unaligned 105474793 105477661 1 2869 NC_000014.9 velvet.8691 99.97 True CONTIG velvet.8691 2928 correct CONTIG velvet.8700 271 unaligned 18932262 18932861 600 1 NC_000014.9 velvet.8710 100.0 True CONTIG velvet.8710 600 correct 102482322 102482859 1 538 NC_000014.9 velvet.8715 100.0 True CONTIG velvet.8715 538 correct CONTIG velvet.8752 435 unaligned CONTIG velvet.8754 249 unaligned CONTIG velvet.8758 334 unaligned 105637782 105638621 1 840 NC_000014.9 velvet.8762 97.74 True CONTIG velvet.8762 840 correct 18314578 18315174 597 1 NC_000014.9 velvet.8766 100.0 True CONTIG velvet.8766 597 correct CONTIG velvet.8767 260 unaligned CONTIG velvet.8791 230 unaligned CONTIG velvet.8818 244 unaligned 18331155 18332109 1 955 NC_000014.9 velvet.8822 100.0 True CONTIG velvet.8822 955 correct CONTIG velvet.8840 494 unaligned CONTIG velvet.8841 404 unaligned CONTIG velvet.8859 341 unaligned CONTIG velvet.8864 203 unaligned 63622692 63623221 564 1 NC_000014.9 velvet.8867 99.79 True fake: scaffold gap size wrong estimation (local) 63621469 63622153 1644 917 NC_000014.9 velvet.8867 100.0 True fake: scaffold gap size wrong estimation (local) 63620026 63620606 3981 3401 NC_000014.9 velvet.8867 100.0 True fake: scaffold gap size wrong estimation (local) 63618410 63619744 5507 4173 NC_000014.9 velvet.8867 100.0 True fake: scaffold gap size wrong estimation (local) 63588669 63589238 32662 32093 NC_000014.9 velvet.8867 100.0 True relocation, scaffold gap is present, inconsistency = 32193872 31387833 31391228 39626 36231 NC_000014.9 velvet.8867 99.79 True fake: scaffold gap size wrong estimation (local) 31385967 31387546 42222 40643 NC_000014.9 velvet.8867 99.87 True fake: scaffold gap size wrong estimation (local) 31384801 31385820 43793 42368 NC_000014.9 velvet.8867 100.0 True fake: scaffold gap size wrong estimation (local) 31381221 31384165 48000 45001 NC_000014.9 velvet.8867 99.83 True fake: scaffold gap size wrong estimation (local) 31379893 31380965 50034 48962 NC_000014.9 velvet.8867 99.53 True fake: scaffold gap size wrong estimation (local) 31373590 31378502 58347 52113 NC_000014.9 velvet.8867 97.69 True fake: scaffold gap size wrong estimation (local) 31370208 31372182 62386 60412 NC_000014.9 velvet.8867 99.9 True fake: scaffold gap size wrong estimation (local) 31367631 31368682 65722 64671 NC_000014.9 velvet.8867 99.9 True fake: scaffold gap size wrong estimation (local) 31365873 31367503 68897 67284 NC_000014.9 velvet.8867 98.46 True fake: scaffold gap size wrong estimation (local) 31360053 31361938 80457 78572 NC_000014.9 velvet.8867 99.95 True fake: scaffold gap size wrong estimation (local) 31331728 31332504 103380 102604 NC_000014.9 velvet.8867 99.87 True relocation, scaffold gap is present, inconsistency = 63845787 95185092 95186696 110181 111785 NC_000014.9 velvet.8867 99.94 True fake: scaffold gap size wrong estimation (local) 95207126 95208780 125345 126999 NC_000014.9 velvet.8867 99.88 True fake: scaffold gap size wrong estimation (local) 95210354 95212799 129324 131769 NC_000014.9 velvet.8867 100.0 True fake: scaffold gap size wrong estimation (local) 95213084 95214363 132703 133982 NC_000014.9 velvet.8867 100.0 True fake: scaffold gap size wrong estimation (local) 95214521 95220158 134609 140318 NC_000014.9 velvet.8867 98.29 True fake: not a misassembly (possible transposable element) 36903649 36904822 140719 141916 NC_000014.9 velvet.8867 96.76 True fake: not a misassembly (possible transposable element) 95228955 95231216 142293 144554 NC_000014.9 velvet.8867 99.96 True relocation, scaffold gap is present, inconsistency = 60922892 34303632 34306052 146896 144565 NC_000014.9 velvet.8867 96.04 True fake: scaffold gap size wrong estimation (local) 34302321 34303368 148719 147672 NC_000014.9 velvet.8867 99.81 True relocation, scaffold gap is present, inconsistency = -29253548 63554512 63555858 150201 148730 NC_000014.9 velvet.8867 100.0 True fake: scaffold gap size wrong estimation (local) 63552736 63553732 152782 151786 NC_000014.9 velvet.8867 100.0 True relocation, scaffold gap is present, inconsistency = 29249925 34300445 34302190 155148 153403 NC_000014.9 velvet.8867 99.83 True relocation, scaffold gap is present, inconsistency = 37210933 71513134 71513712 155159 155737 NC_000014.9 velvet.8867 99.83 True relocation, scaffold gap is present, inconsistency = 7961065 63551242 63552058 156564 155748 NC_000014.9 velvet.8867 100.0 True relocation, scaffold gap is present, inconsistency = 29267731 34278736 34279444 161339 160631 NC_000014.9 velvet.8867 99.86 True local misassembly 34279702 34281135 162907 161474 NC_000014.9 velvet.8867 99.58 True relocation, scaffold gap is present, inconsistency = -7841 34285900 34286957 164550 163493 NC_000014.9 velvet.8867 99.53 True fake: scaffold gap size wrong estimation (extensive) 34274168 34276046 166439 164561 NC_000014.9 velvet.8867 99.84 True fake: scaffold gap size wrong estimation (local) 34265580 34273145 175703 168138 NC_000014.9 velvet.8867 99.88 True relocation, scaffold gap is present, inconsistency = 37291607 71564763 71570288 175714 181931 NC_000014.9 velvet.8867 100.0 True fake: scaffold gap size wrong estimation (local) 71571078 71571656 182918 183496 NC_000014.9 velvet.8867 100.0 True fake: scaffold gap size wrong estimation (local) 71571956 71576888 184510 189647 NC_000014.9 velvet.8867 99.98 True relocation, scaffold gap is present, inconsistency = 37294437 34276128 34277508 191038 189658 NC_000014.9 velvet.8867 99.93 True relocation, scaffold gap is present, inconsistency = 37269466 71550940 71552390 195004 196454 NC_000014.9 velvet.8867 100.0 True fake: scaffold gap size wrong estimation (local) 71552669 71555405 197355 200421 NC_000014.9 velvet.8867 100.0 True relocation, scaffold gap is present, inconsistency = -21360530 50194886 50195577 200432 201123 NC_000014.9 velvet.8867 99.86 True local misassembly 50196028 50197081 201124 202177 NC_000014.9 velvet.8867 99.05 True relocation, scaffold gap is present, inconsistency = 15901965 34281951 34285142 214288 211098 NC_000014.9 velvet.8867 99.78 True relocation, scaffold gap is present, inconsistency = 15817 34255128 34255701 225293 224721 NC_000014.9 velvet.8867 99.13 True fake: scaffold gap size wrong estimation (local) 34250786 34255015 230642 226368 NC_000014.9 velvet.8867 99.81 True relocation, scaffold gap is present, inconsistency = 15943098 50199156 50200646 231685 233175 NC_000014.9 velvet.8867 99.93 True relocation, scaffold gap is present, inconsistency = 15941549 34248742 34250592 242040 240190 NC_000014.9 velvet.8867 99.78 True fake: scaffold gap size wrong estimation (local) 34246261 34248578 245288 242548 NC_000014.9 velvet.8867 99.16 True fake: scaffold gap size wrong estimation (local) 34232005 34240142 254231 246094 NC_000014.9 velvet.8867 99.72 True local misassembly 34230909 34232004 256789 255694 NC_000014.9 velvet.8867 99.36 True fake: scaffold gap size wrong estimation (local) 34227229 34230908 264183 260504 NC_000014.9 velvet.8867 99.54 True fake: scaffold gap size wrong estimation (local) 34222005 34225453 270645 266457 NC_000014.9 velvet.8867 99.94 True fake: scaffold gap size wrong estimation (local) 34216214 34221725 277272 271711 NC_000014.9 velvet.8867 99.84 True relocation, scaffold gap is present, inconsistency = 37355029 71578244 71581254 278762 281895 NC_000014.9 velvet.8867 100.0 True fake: not a misassembly (possible transposable element) 71597258 71599143 281906 283791 NC_000014.9 velvet.8867 99.95 True fake: not a misassembly (possible transposable element) 71581332 71590023 283802 292490 NC_000014.9 velvet.8867 99.95 True fake: scaffold gap size wrong estimation (local) 71590110 71593326 293266 296736 NC_000014.9 velvet.8867 99.72 True fake: scaffold gap size wrong estimation (local) 71593481 71597210 297665 301394 NC_000014.9 velvet.8867 99.97 True fake: scaffold gap size wrong estimation (local) 71599447 71603679 304116 308349 NC_000014.9 velvet.8867 99.98 True fake: scaffold gap size wrong estimation (local) 71609772 71611699 308360 310278 NC_000014.9 velvet.8867 99.07 True fake: scaffold gap size wrong estimation (local) 71611878 71613998 311197 313317 NC_000014.9 velvet.8867 99.95 True relocation, scaffold gap is present, inconsistency = -9765 71604244 71608655 313328 317718 NC_000014.9 velvet.8867 99.52 True fake: scaffold gap size wrong estimation (local) 71608925 71609447 318686 319208 NC_000014.9 velvet.8867 99.81 True fake: scaffold gap size wrong estimation (local) 71614251 71615759 330792 332300 NC_000014.9 velvet.8867 100.0 True fake: scaffold gap size wrong estimation (local) 71616006 71620096 333232 337322 NC_000014.9 velvet.8867 99.95 True fake: scaffold gap size wrong estimation (local) 71620371 71625315 338355 343299 NC_000014.9 velvet.8867 100.0 True fake: scaffold gap size wrong estimation (local) 71625464 71627156 344181 345873 NC_000014.9 velvet.8867 100.0 True fake: scaffold gap size wrong estimation (extensive) 71635306 71636799 345884 347377 NC_000014.9 velvet.8867 100.0 True local misassembly 71637118 71637710 347378 347970 NC_000014.9 velvet.8867 98.15 True fake: scaffold gap size wrong estimation (local) 71637711 71639919 348532 350740 NC_000014.9 velvet.8867 98.23 True fake: scaffold gap size wrong estimation (local) 71640928 71641468 352742 353282 NC_000014.9 velvet.8867 100.0 True fake: not a misassembly (possible transposable element) 71627444 71628974 353293 354768 NC_000014.9 velvet.8867 96.38 True fake: not a misassembly (possible transposable element) 71641741 71643858 354779 357091 NC_000014.9 velvet.8867 99.95 True relocation, scaffold gap is present, inconsistency = -15159 71629232 71630910 357624 359302 NC_000014.9 velvet.8867 100.0 True fake: scaffold gap size wrong estimation (local) 71631234 71633281 360347 362374 NC_000014.9 velvet.8867 99.02 True fake: scaffold gap size wrong estimation (local) 71633473 71634069 362807 363403 NC_000014.9 velvet.8867 99.83 True relocation, scaffold gap is present, inconsistency = 17241 71652658 71654556 364751 366649 NC_000014.9 velvet.8867 99.95 True relocation, scaffold gap is present, inconsistency = -10029 71644538 71646204 366660 368326 NC_000014.9 velvet.8867 100.0 True fake: scaffold gap size wrong estimation (local) 71646465 71647906 369319 370760 NC_000014.9 velvet.8867 99.86 True fake: scaffold gap size wrong estimation (local) 71648256 71649210 371172 372126 NC_000014.9 velvet.8867 100.0 True CONTIG velvet.8867 372568 misassembled 25496087 25497733 1 1647 NC_000014.9 velvet.8876 100.0 True CONTIG velvet.8876 1647 correct CONTIG velvet.8885 648 unaligned 28381886 28386494 1 4609 NC_000014.9 velvet.8886 99.93 True CONTIG velvet.8886 7258 correct CONTIG velvet.8894 305 unaligned 32223816 32227603 3788 1 NC_000014.9 velvet.8936 100.0 True fake: scaffold gap size wrong estimation (local) 32221590 32223671 6805 4724 NC_000014.9 velvet.8936 100.0 True CONTIG velvet.8936 9130 correct 65021000 65021732 1 733 NC_000014.9 velvet.8939 99.86 True CONTIG velvet.8939 4806 correct CONTIG velvet.8964 407 unaligned 78670473 78677389 1 6919 NC_000014.9 velvet.8966 99.93 True CONTIG velvet.8966 6919 correct CONTIG velvet.8973 360 unaligned 76254640 76260475 5837 1 NC_000014.9 velvet.8983 99.78 True relocation, scaffold gap is present, inconsistency = 51125107 25125170 25129522 10200 5848 NC_000014.9 velvet.8983 99.89 True relocation, scaffold gap is present, inconsistency = 5010017 30141443 30142723 12104 13385 NC_000014.9 velvet.8983 99.77 True relocation, scaffold gap is present, inconsistency = 23588308 53731042 53732632 14986 13396 NC_000014.9 velvet.8983 99.87 True relocation, scaffold gap is present, inconsistency = 28615774 25108313 25115257 21942 14997 NC_000014.9 velvet.8983 99.93 True relocation, scaffold gap is present, inconsistency = -51138100 76244525 76246402 23830 21953 NC_000014.9 velvet.8983 100.0 True local misassembly 76246448 76249118 26511 23841 NC_000014.9 velvet.8983 99.93 True CONTIG velvet.8983 30550 misassembled CONTIG velvet.8998 238 unaligned CONTIG velvet.8999 303 unaligned CONTIG velvet.9000 203 unaligned 71895488 71896255 663 1430 NC_000014.9 velvet.9003 99.48 True CONTIG velvet.9003 1430 correct CONTIG velvet.9007 205 unaligned CONTIG velvet.9009 470 unaligned CONTIG velvet.9041 482 unaligned 19658432 19659037 1 606 NC_000014.9 velvet.9051 100.0 True CONTIG velvet.9051 606 correct CONTIG velvet.9064 269 unaligned CONTIG velvet.9081 253 unaligned 84570194 84570878 1 685 NC_000014.9 velvet.9082 100.0 True fake: scaffold gap size wrong estimation (local) 84571360 84576237 1685 6562 NC_000014.9 velvet.9082 99.9 True fake: scaffold gap size wrong estimation (local) 84576334 84577729 7259 8654 NC_000014.9 velvet.9082 100.0 True fake: scaffold gap size wrong estimation (local) 84607568 84609882 38418 40732 NC_000014.9 velvet.9082 100.0 True fake: scaffold gap size wrong estimation (local) 84610968 84615741 42577 47350 NC_000014.9 velvet.9082 99.92 True fake: scaffold gap size wrong estimation (local) 84615961 84616473 48569 49068 NC_000014.9 velvet.9082 97.42 True fake: scaffold gap size wrong estimation (local) 84617089 84618510 49514 50935 NC_000014.9 velvet.9082 99.86 True fake: scaffold gap size wrong estimation (local) 84637288 84638986 65913 67611 NC_000014.9 velvet.9082 99.82 True CONTIG velvet.9082 67611 correct 57262702 57263344 1 643 NC_000014.9 velvet.9088 100.0 True fake: scaffold gap size wrong estimation (local) 57263769 57265455 987 2726 NC_000014.9 velvet.9088 100.0 True fake: scaffold gap size wrong estimation (local) 57265551 57268078 3326 6254 NC_000014.9 velvet.9088 100.0 True fake: scaffold gap size wrong estimation (local) 57280879 57283517 15140 17778 NC_000014.9 velvet.9088 99.96 True CONTIG velvet.9088 17778 correct CONTIG velvet.9100 459 unaligned CONTIG velvet.9103 258 unaligned CONTIG velvet.9104 277 unaligned 105585566 105587899 1 2335 NC_000014.9 velvet.9126 98.97 True CONTIG velvet.9126 2335 correct CONTIG velvet.9134 208 unaligned CONTIG velvet.9138 308 unaligned CONTIG velvet.9181 368 unaligned 34874944 34876574 20638 19008 NC_000014.9 velvet.9206 99.94 True fake: scaffold gap size wrong estimation (local) 34869520 34871588 22717 20649 NC_000014.9 velvet.9206 99.95 True fake: scaffold gap size wrong estimation (local) 34867241 34868532 25838 24547 NC_000014.9 velvet.9206 99.92 True fake: scaffold gap size wrong estimation (local) 34865051 34866347 29135 27845 NC_000014.9 velvet.9206 99.54 True fake: scaffold gap size wrong estimation (local) 34860874 34862765 34128 32237 NC_000014.9 velvet.9206 99.95 True fake: scaffold gap size wrong estimation (local) 34859422 34860240 36456 35638 NC_000014.9 velvet.9206 98.78 True local misassembly 34858709 34859286 37034 36457 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 34857266 34858287 39423 38401 NC_000014.9 velvet.9206 99.9 True fake: scaffold gap size wrong estimation (extensive) 34830942 34831974 58723 57691 NC_000014.9 velvet.9206 99.9 True local misassembly 34832216 34832900 59466 58734 NC_000014.9 velvet.9206 99.55 True fake: scaffold gap size wrong estimation (local) 34829269 34830771 62062 60560 NC_000014.9 velvet.9206 99.2 True local misassembly 34828294 34829041 62810 62063 NC_000014.9 velvet.9206 99.87 True fake: scaffold gap size wrong estimation (local) 34825938 34827070 66146 65014 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 34824409 34825171 68291 67529 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 34820762 34821701 72923 71984 NC_000014.9 velvet.9206 99.68 True fake: scaffold gap size wrong estimation (local) 34801908 34803095 86349 85125 NC_000014.9 velvet.9206 96.88 True fake: scaffold gap size wrong estimation (local) 34799891 34801316 89798 88373 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 34782364 34783365 112054 111053 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 34778990 34781526 116770 113621 NC_000014.9 velvet.9206 99.92 True fake: scaffold gap size wrong estimation (local) 34777971 34778877 117687 116781 NC_000014.9 velvet.9206 99.67 True fake: scaffold gap size wrong estimation (local) 34775098 34777370 121206 118934 NC_000014.9 velvet.9206 99.96 True fake: scaffold gap size wrong estimation (local) 34773506 34774672 125148 123982 NC_000014.9 velvet.9206 99.83 True fake: scaffold gap size wrong estimation (local) 34771247 34771979 128223 127491 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 34767494 34770171 132981 130261 NC_000014.9 velvet.9206 99.85 True fake: scaffold gap size wrong estimation (local) 34764548 34767274 136743 134017 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 34761240 34764273 140925 137793 NC_000014.9 velvet.9206 95.73 True fake: scaffold gap size wrong estimation (local) 34759940 34760995 143486 142376 NC_000014.9 velvet.9206 99.9 True fake: scaffold gap size wrong estimation (local) 34734311 34734832 169940 169419 NC_000014.9 velvet.9206 99.04 True fake: scaffold gap size wrong estimation (local) 34732209 34733939 173019 171290 NC_000014.9 velvet.9206 99.42 True fake: scaffold gap size wrong estimation (local) 34730166 34730731 175886 175315 NC_000014.9 velvet.9206 98.75 True fake: scaffold gap size wrong estimation (local) 34728467 34729337 178675 177805 NC_000014.9 velvet.9206 99.66 True relocation, scaffold gap is present, inconsistency = -13037 34740242 34740904 179945 179275 NC_000014.9 velvet.9206 99.55 True relocation, scaffold gap is present, inconsistency = 61699360 96440275 96440967 179956 180648 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 96441754 96443692 181990 183928 NC_000014.9 velvet.9206 99.95 True fake: scaffold gap size wrong estimation (local) 96444146 96444728 184997 185579 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 96445021 96446684 186000 187744 NC_000014.9 velvet.9206 99.57 True fake: scaffold gap size wrong estimation (local) 96446956 96447956 188107 189153 NC_000014.9 velvet.9206 99.78 True fake: scaffold gap size wrong estimation (local) 96476538 96478920 211564 213946 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 96479417 96480225 215381 216172 NC_000014.9 velvet.9206 97.87 True fake: scaffold gap size wrong estimation (local) 96480458 96481356 216258 217156 NC_000014.9 velvet.9206 99.89 True relocation, scaffold gap is present, inconsistency = 61749193 34726996 34727746 221449 220675 NC_000014.9 velvet.9206 96.52 True fake: not a misassembly (possible transposable element) 96471360 96472263 226280 227183 NC_000014.9 velvet.9206 99.89 True fake: not a misassembly (possible transposable element) 34719912 34721905 229563 227576 NC_000014.9 velvet.9206 99.45 True relocation, scaffold gap is present, inconsistency = 61751537 96473453 96474418 229574 230539 NC_000014.9 velvet.9206 100.0 True local misassembly 96474608 96475856 230540 231788 NC_000014.9 velvet.9206 99.2 True fake: scaffold gap size wrong estimation (local) 96481989 96483457 231799 233267 NC_000014.9 velvet.9206 99.93 True fake: scaffold gap size wrong estimation (local) 96484254 96485821 234898 236465 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 96486087 96487135 236845 237977 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 96488203 96488824 239704 240325 NC_000014.9 velvet.9206 98.39 True indel: indel (<= 5bp) 96488827 96490186 240326 241685 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 96493231 96494908 241696 243373 NC_000014.9 velvet.9206 100.0 True local misassembly 96490914 96492938 243384 245450 NC_000014.9 velvet.9206 99.74 True fake: scaffold gap size wrong estimation (local) 96495126 96495806 247796 248476 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 96496121 96496655 249642 250176 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 96496656 96498414 250239 251997 NC_000014.9 velvet.9206 98.12 True local misassembly 96498689 96499372 251998 252681 NC_000014.9 velvet.9206 98.54 True fake: scaffold gap size wrong estimation (local) 96500858 96502777 255375 257294 NC_000014.9 velvet.9206 99.95 True relocation, scaffold gap is present, inconsistency = 61811111 34687463 34689736 259650 257305 NC_000014.9 velvet.9206 96.38 True fake: scaffold gap size wrong estimation (local) 34685649 34686512 262277 261414 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 34684530 34685262 263465 262733 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 34682460 34683810 266247 264897 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 34681326 34682173 267638 266791 NC_000014.9 velvet.9206 99.88 True fake: scaffold gap size wrong estimation (local) 34680365 34681075 268886 268176 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 34677808 34679019 272040 270829 NC_000014.9 velvet.9206 99.83 True relocation, scaffold gap is present, inconsistency = -14770 34691021 34691854 273597 272764 NC_000014.9 velvet.9206 99.88 True fake: not a misassembly (possible transposable element) 20572513 20573014 274650 274149 NC_000014.9 velvet.9206 99.8 True fake: not a misassembly (possible transposable element) 34658407 34659056 305445 304796 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 34655806 34656746 308940 307958 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 34652757 34654104 312933 311586 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = 61846012 96502804 96505977 315621 319579 NC_000014.9 velvet.9206 98.91 True fake: scaffold gap size wrong estimation (local) 96506204 96507304 319806 320906 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 96508160 96514195 322595 329204 NC_000014.9 velvet.9206 99.87 True fake: scaffold gap size wrong estimation (local) 96514470 96517717 329988 333253 NC_000014.9 velvet.9206 99.39 True fake: scaffold gap size wrong estimation (local) 96517887 96518426 334051 334590 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 96519207 96520438 335764 336995 NC_000014.9 velvet.9206 99.92 True fake: scaffold gap size wrong estimation (local) 96520661 96521503 337527 338369 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 96522167 96529469 339364 348095 NC_000014.9 velvet.9206 99.44 True fake: scaffold gap size wrong estimation (local) 96529725 96530404 348676 349355 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 96531397 96533568 351040 353187 NC_000014.9 velvet.9206 98.88 True fake: scaffold gap size wrong estimation (local) 96533852 96540921 354259 361328 NC_000014.9 velvet.9206 99.97 True fake: scaffold gap size wrong estimation (local) 96541200 96543595 362429 364824 NC_000014.9 velvet.9206 99.96 True fake: not a misassembly (possible transposable element) 96434554 96436361 374187 372402 NC_000014.9 velvet.9206 98.78 True fake: not a misassembly (possible transposable element) 96562195 96570095 379809 387757 NC_000014.9 velvet.9206 99.96 True relocation, scaffold gap is present, inconsistency = -163687 96406829 96407579 388178 388928 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 96407859 96409348 389034 390523 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = 150239 96570387 96572320 401323 403256 NC_000014.9 velvet.9206 99.95 True relocation, scaffold gap is present, inconsistency = -161123 96411501 96412125 403560 404184 NC_000014.9 velvet.9206 100.0 True inversion, scaffold gap is present 96409554 96410739 405458 404273 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = 161990 96572740 96575671 405469 408400 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 96576118 96580025 409632 413539 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = 169403 96406177 96406704 414077 413550 NC_000014.9 velvet.9206 98.11 True local misassembly 96405407 96406039 414710 414078 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 96404143 96405249 416828 415722 NC_000014.9 velvet.9206 99.1 True local misassembly 96403128 96403928 417629 416829 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 96400310 96402845 421368 418839 NC_000014.9 velvet.9206 99.68 True fake: scaffold gap size wrong estimation (local) 96398688 96400021 423352 421984 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 96397672 96398594 425367 424445 NC_000014.9 velvet.9206 99.78 True fake: scaffold gap size wrong estimation (local) 96396172 96396941 426340 425571 NC_000014.9 velvet.9206 99.87 True fake: scaffold gap size wrong estimation (local) 96394937 96395714 428550 427773 NC_000014.9 velvet.9206 99.87 True fake: scaffold gap size wrong estimation (local) 96394099 96394689 429629 429039 NC_000014.9 velvet.9206 98.31 True local misassembly 96392859 96393855 430626 429630 NC_000014.9 velvet.9206 99.9 True relocation, scaffold gap is present, inconsistency = 179646 96580200 96591791 437325 448916 NC_000014.9 velvet.9206 99.97 True fake: scaffold gap size wrong estimation (local) 96592105 96594111 449987 451993 NC_000014.9 velvet.9206 99.95 True fake: scaffold gap size wrong estimation (local) 96594389 96597164 452987 455710 NC_000014.9 velvet.9206 96.43 True relocation, scaffold gap is present, inconsistency = 66247312 30335123 30336539 467664 466248 NC_000014.9 velvet.9206 99.93 True fake: not a misassembly (possible transposable element) 54626016 54627676 469337 467675 NC_000014.9 velvet.9206 99.88 True fake: not a misassembly (possible transposable element) 30332132 30334343 471561 469350 NC_000014.9 velvet.9206 100.0 True local misassembly 30334377 30334992 472187 471572 NC_000014.9 velvet.9206 99.84 True fake: scaffold gap size wrong estimation (extensive) 30321882 30325925 477120 472815 NC_000014.9 velvet.9206 99.95 True fake: scaffold gap size wrong estimation (local) 30318213 30321757 481549 478005 NC_000014.9 velvet.9206 99.97 True relocation, scaffold gap is present, inconsistency = -66042724 96359235 96360909 483970 481577 NC_000014.9 velvet.9206 99.94 True fake: scaffold gap size wrong estimation (local) 96356174 96359089 487155 484000 NC_000014.9 velvet.9206 99.83 True fake: scaffold gap size wrong estimation (local) 96353648 96354319 490522 489851 NC_000014.9 velvet.9206 99.7 True fake: scaffold gap size wrong estimation (local) 96351902 96353342 493279 491839 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = 41752270 54597751 54598841 495160 494070 NC_000014.9 velvet.9206 99.91 True fake: not a misassembly (possible transposable element) 54583106 54585670 497734 495171 NC_000014.9 velvet.9206 99.77 True fake: not a misassembly (possible transposable element) 54594421 54596300 499624 497745 NC_000014.9 velvet.9206 99.95 True fake: scaffold gap size wrong estimation (local) 54592732 54594287 501948 500393 NC_000014.9 velvet.9206 99.87 True fake: scaffold gap size wrong estimation (local) 54590466 54592483 504659 502643 NC_000014.9 velvet.9206 99.85 True fake: not a misassembly (possible transposable element) 30297768 30299508 506410 504670 NC_000014.9 velvet.9206 100.0 True fake: not a misassembly (possible transposable element) 54588498 54590218 508141 506421 NC_000014.9 velvet.9206 99.88 True relocation, scaffold gap is present, inconsistency = 23319570 31265620 31266839 510230 511449 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 31269283 31271639 514458 516814 NC_000014.9 velvet.9206 99.96 True relocation, scaffold gap is present, inconsistency = 23300147 54578681 54583010 528038 523709 NC_000014.9 velvet.9206 99.88 True relocation, scaffold gap is present, inconsistency = 23284226 31292876 31294444 528049 529617 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = 11046 31305501 31307071 529628 531203 NC_000014.9 velvet.9206 96.42 True local misassembly 31304713 31305298 531214 531799 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = -10995 31294708 31297048 532204 534480 NC_000014.9 velvet.9206 97.21 True fake: scaffold gap size wrong estimation (local) 31297265 31298571 535858 537165 NC_000014.9 velvet.9206 99.85 True fake: not a misassembly (possible transposable element) 54556655 54558728 539292 537321 NC_000014.9 velvet.9206 95.06 True fake: not a misassembly (possible transposable element) 31300038 31301332 539449 540744 NC_000014.9 velvet.9206 99.85 True fake: scaffold gap size wrong estimation (local) 31303421 31303954 543563 544096 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = 30307638 61611603 61612854 545359 544107 NC_000014.9 velvet.9206 99.84 True fake: scaffold gap size wrong estimation (local) 61610686 61611305 546346 545727 NC_000014.9 velvet.9206 99.84 True fake: scaffold gap size wrong estimation (local) 61607152 61610619 550553 547086 NC_000014.9 velvet.9206 99.88 True fake: scaffold gap size wrong estimation (local) 61579736 61583193 571895 568382 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = 7054354 54523237 54524371 574030 572906 NC_000014.9 velvet.9206 99.11 True local misassembly 54526429 54527344 575516 574613 NC_000014.9 velvet.9206 98.68 True fake: scaffold gap size wrong estimation (local) 54525033 54525874 576564 575723 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = 16099005 70624890 70626848 576575 578574 NC_000014.9 velvet.9206 99.9 True fake: scaffold gap size wrong estimation (extensive) 70635696 70636788 578585 579677 NC_000014.9 velvet.9206 99.91 True relocation, scaffold gap is present, inconsistency = 18552986 52073881 52082699 588506 579688 NC_000014.9 velvet.9206 99.66 True relocation, scaffold gap is present, inconsistency = -18704480 70777103 70778127 589764 588740 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 70774994 70775906 592558 591646 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 70770453 70774379 597956 594030 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 70769104 70770213 600064 598955 NC_000014.9 velvet.9206 99.91 True fake: scaffold gap size wrong estimation (local) 70767385 70768067 601510 600829 NC_000014.9 velvet.9206 99.85 True fake: scaffold gap size wrong estimation (local) 70765873 70767100 604006 602779 NC_000014.9 velvet.9206 99.92 True relocation, scaffold gap is present, inconsistency = 16257525 54503344 54504288 609010 608066 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 54501199 54503089 612489 609622 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 54497222 54499185 616450 614487 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = 2440227 52028476 52030324 644969 643121 NC_000014.9 velvet.9206 99.51 True relocation, scaffold gap is present, inconsistency = 18639264 70669599 70670430 644980 645811 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = -7993 70662448 70664482 645822 647856 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 70670520 70675497 647867 652844 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 70675723 70676767 653716 654760 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = 71137 70748106 70750116 656972 654962 NC_000014.9 velvet.9206 99.9 True relocation, scaffold gap is present, inconsistency = 43536694 27201990 27210726 657658 667612 NC_000014.9 velvet.9206 99.93 True relocation, scaffold gap is present, inconsistency = 70905205 98115942 98120229 667623 671910 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 98120474 98125032 672975 677533 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = 27747300 70368694 70369346 682013 681361 NC_000014.9 velvet.9206 99.85 True fake: scaffold gap size wrong estimation (local) 70364251 70367314 687235 684172 NC_000014.9 velvet.9206 99.97 True fake: scaffold gap size wrong estimation (local) 70362802 70364032 689297 688067 NC_000014.9 velvet.9206 99.76 True fake: scaffold gap size wrong estimation (local) 70361349 70362352 691265 690262 NC_000014.9 velvet.9206 99.0 True local misassembly 70360248 70361163 692181 691266 NC_000014.9 velvet.9206 99.89 True relocation, scaffold gap is present, inconsistency = 258269 70619443 70620772 692192 693665 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 70621048 70624595 694359 697906 NC_000014.9 velvet.9206 99.92 True fake: scaffold gap size wrong estimation (local) 70631893 70632961 698310 699378 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 70633099 70635498 700217 702616 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = 18559221 52066323 52073867 710171 702627 NC_000014.9 velvet.9206 99.75 True fake: scaffold gap size wrong estimation (local) 52054719 52056562 717498 715656 NC_000014.9 velvet.9206 99.73 True fake: scaffold gap size wrong estimation (local) 52051192 52054586 721822 718428 NC_000014.9 velvet.9206 99.85 True fake: scaffold gap size wrong estimation (local) 52040212 52044257 732570 728525 NC_000014.9 velvet.9206 99.88 True local misassembly 52044886 52045542 733237 732581 NC_000014.9 velvet.9206 100.0 True fake: not a misassembly (possible transposable element) 70664762 70668599 733248 737085 NC_000014.9 velvet.9206 100.0 True fake: not a misassembly (possible transposable element) 52037419 52039953 741508 738974 NC_000014.9 velvet.9206 99.68 True fake: scaffold gap size wrong estimation (local) 52035968 52037299 743519 742185 NC_000014.9 velvet.9206 99.48 True fake: scaffold gap size wrong estimation (extensive) 52026511 52027630 745098 743979 NC_000014.9 velvet.9206 99.91 True relocation, scaffold gap is present, inconsistency = -9053 52030669 52035553 750031 745109 NC_000014.9 velvet.9206 98.84 True fake: scaffold gap size wrong estimation (extensive) 52018085 52023194 755150 750042 NC_000014.9 velvet.9206 99.92 True fake: scaffold gap size wrong estimation (local) 52012551 52017840 761459 756170 NC_000014.9 velvet.9206 99.96 True fake: scaffold gap size wrong estimation (local) 52009996 52012452 764313 761632 NC_000014.9 velvet.9206 99.88 True relocation, scaffold gap is present, inconsistency = 67319 51936739 51937637 769353 770251 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 51937741 51942572 770456 775287 NC_000014.9 velvet.9206 99.9 True relocation, scaffold gap is present, inconsistency = 27518112 24406225 24419618 788678 775298 NC_000014.9 velvet.9206 99.78 True relocation, scaffold gap is present, inconsistency = -27580421 51976471 51986291 798849 789033 NC_000014.9 velvet.9206 99.92 True fake: scaffold gap size wrong estimation (local) 51973338 51976370 802701 798959 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 51971571 51972548 805084 804107 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 51966232 51971318 810954 805868 NC_000014.9 velvet.9206 99.92 True fake: scaffold gap size wrong estimation (local) 51958441 51965926 819810 811824 NC_000014.9 velvet.9206 99.3 True relocation, scaffold gap is present, inconsistency = 20883 51986941 51987906 819942 820907 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 51993085 51995821 820918 823654 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = 27601305 24390260 24391769 825174 823665 NC_000014.9 velvet.9206 99.8 True fake: scaffold gap size wrong estimation (local) 24387778 24389878 828514 826405 NC_000014.9 velvet.9206 99.86 True fake: scaffold gap size wrong estimation (local) 24384870 24385925 829779 828725 NC_000014.9 velvet.9206 99.81 True fake: scaffold gap size wrong estimation (local) 24375123 24379707 834374 829790 NC_000014.9 velvet.9206 99.67 True fake: scaffold gap size wrong estimation (local) 24371948 24375026 841788 838710 NC_000014.9 velvet.9206 99.55 True local misassembly 24368912 24371774 844722 841860 NC_000014.9 velvet.9206 99.69 True local misassembly 24368133 24368902 846385 845616 NC_000014.9 velvet.9206 98.57 True indel: indel (<= 5bp) 24366561 24368131 847956 846386 NC_000014.9 velvet.9206 99.43 True fake: scaffold gap size wrong estimation (local) 24365813 24366560 850421 849674 NC_000014.9 velvet.9206 98.53 True indel: indel (<= 5bp) 24364930 24365811 851303 850422 NC_000014.9 velvet.9206 99.77 True relocation, scaffold gap is present, inconsistency = -22936 24386573 24387291 852596 851878 NC_000014.9 velvet.9206 99.72 True relocation, scaffold gap is present, inconsistency = -7345 24392052 24393005 854462 853509 NC_000014.9 velvet.9206 99.9 True relocation, scaffold gap is present, inconsistency = -27544471 51932285 51935011 858750 855974 NC_000014.9 velvet.9206 99.89 True relocation, scaffold gap is present, inconsistency = 27576107 24353518 24354175 861410 860753 NC_000014.9 velvet.9206 99.7 True fake: scaffold gap size wrong estimation (local) 24351405 24353288 864057 862169 NC_000014.9 velvet.9206 99.95 True relocation, scaffold gap is present, inconsistency = 6763807 31117381 31118052 864343 865014 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 31118933 31120141 866086 867294 NC_000014.9 velvet.9206 99.92 True inversion, scaffold gap is present 31122537 31124794 869561 867305 NC_000014.9 velvet.9206 99.96 True fake: not a misassembly (possible transposable element) 24362901 24363538 870419 869782 NC_000014.9 velvet.9206 100.0 True fake: not a misassembly (possible transposable element) 31120323 31122256 872563 870630 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = 6768638 24349200 24350635 875048 873613 NC_000014.9 velvet.9206 99.72 True fake: scaffold gap size wrong estimation (local) 24346421 24347827 879416 878010 NC_000014.9 velvet.9206 99.64 True relocation, scaffold gap is present, inconsistency = 46351553 70699392 70703121 879428 883127 NC_000014.9 velvet.9206 99.12 True fake: scaffold gap size wrong estimation (local) 70704308 70706834 885213 887739 NC_000014.9 velvet.9206 99.8 True inversion, scaffold gap is present 70707001 70710581 891328 887750 NC_000014.9 velvet.9206 99.92 True relocation, scaffold gap is present, inconsistency = 43465894 27234202 27238168 894267 898233 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = 27224484 54462663 54465144 898244 900725 NC_000014.9 velvet.9206 99.96 True relocation, scaffold gap is present, inconsistency = 16251192 70716347 70718071 900736 902460 NC_000014.9 velvet.9206 99.88 True fake: scaffold gap size wrong estimation (local) 70722741 70728135 902471 907863 NC_000014.9 velvet.9206 99.89 True fake: scaffold gap size wrong estimation (local) 70728424 70731199 908963 911738 NC_000014.9 velvet.9206 99.96 True relocation, scaffold gap is present, inconsistency = 37305 70689772 70691108 913058 911749 NC_000014.9 velvet.9206 97.89 True fake: not a misassembly (possible transposable element) 61542497 61548612 913134 919250 NC_000014.9 velvet.9206 99.89 True fake: not a misassembly (possible transposable element) 70676881 70678366 920739 919261 NC_000014.9 velvet.9206 99.46 True relocation, scaffold gap is present, inconsistency = 16179572 54493591 54494654 923394 924457 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 54494948 54495646 925197 925895 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = 16182978 70678635 70679535 926806 925906 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = 16225 70657959 70662399 931334 926817 NC_000014.9 velvet.9206 98.05 True relocation, scaffold gap is present, inconsistency = 11729180 58923176 58925439 936937 934674 NC_000014.9 velvet.9206 99.78 True fake: scaffold gap size wrong estimation (local) 58921959 58922709 938448 937698 NC_000014.9 velvet.9206 98.93 True fake: scaffold gap size wrong estimation (local) 58916798 58921559 944269 939508 NC_000014.9 velvet.9206 99.94 True relocation, scaffold gap is present, inconsistency = 6861397 52046354 52051196 948474 953448 NC_000014.9 velvet.9206 99.94 True relocation, scaffold gap is present, inconsistency = 18593895 70645102 70650187 958544 953459 NC_000014.9 velvet.9206 99.94 True fake: scaffold gap size wrong estimation (local) 70642202 70644833 962261 959630 NC_000014.9 velvet.9206 99.92 True fake: scaffold gap size wrong estimation (local) 70639733 70641572 965543 963673 NC_000014.9 velvet.9206 97.81 True fake: scaffold gap size wrong estimation (extensive) 70629123 70631700 968126 965554 NC_000014.9 velvet.9206 99.81 True fake: not a misassembly (possible transposable element) 52060409 52062828 968137 970556 NC_000014.9 velvet.9206 99.88 True fake: not a misassembly (possible transposable element) 70627068 70628438 971940 970567 NC_000014.9 velvet.9206 99.71 True relocation, scaffold gap is present, inconsistency = 18566679 52057745 52060378 971951 974584 NC_000014.9 velvet.9206 99.96 True relocation, scaffold gap is present, inconsistency = 18706506 70768315 70769102 976015 976802 NC_000014.9 velvet.9206 99.87 True relocation, scaffold gap is present, inconsistency = 110623 70655389 70657681 979153 976813 NC_000014.9 velvet.9206 97.11 True fake: scaffold gap size wrong estimation (local) 70651256 70654318 984107 980992 NC_000014.9 velvet.9206 99.8 True fake: scaffold gap size wrong estimation (local) 70650424 70651002 985421 984843 NC_000014.9 velvet.9206 99.83 True relocation, scaffold gap is present, inconsistency = 106477 70757490 70758779 985432 986721 NC_000014.9 velvet.9206 99.84 True fake: scaffold gap size wrong estimation (local) 70760180 70761597 989828 991245 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 70761630 70763546 992284 994200 NC_000014.9 velvet.9206 99.9 True relocation, scaffold gap is present, inconsistency = 18802986 51949122 51958341 1003722 994503 NC_000014.9 velvet.9206 99.82 True fake: scaffold gap size wrong estimation (local) 51945842 51948836 1007799 1004805 NC_000014.9 velvet.9206 99.7 True fake: not a misassembly (possible transposable element) 51986340 51986840 1007810 1008310 NC_000014.9 velvet.9206 100.0 True fake: not a misassembly (possible transposable element) 51942630 51945110 1012544 1010085 NC_000014.9 velvet.9206 99.03 True relocation, scaffold gap is present, inconsistency = 50721 51995842 52009751 1012555 1027359 NC_000014.9 velvet.9206 99.91 True relocation, scaffold gap is present, inconsistency = 67822 51926802 51928009 1028577 1027370 NC_000014.9 velvet.9206 100.0 True local misassembly 51931087 51931969 1029697 1028815 NC_000014.9 velvet.9206 99.43 True fake: scaffold gap size wrong estimation (local) 51928768 51929512 1030452 1029708 NC_000014.9 velvet.9206 99.87 True relocation, scaffold gap is present, inconsistency = 27562051 24361273 24362701 1035896 1034468 NC_000014.9 velvet.9206 99.16 True local misassembly 24360414 24361131 1036614 1035897 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = -27566566 51926043 51926798 1037551 1036796 NC_000014.9 velvet.9206 100.0 True local misassembly 51929952 51930988 1040515 1039479 NC_000014.9 velvet.9206 99.9 True fake: scaffold gap size wrong estimation (local) 51919096 51925623 1047051 1040526 NC_000014.9 velvet.9206 99.92 True relocation, scaffold gap is present, inconsistency = 18868876 70796057 70797527 1048609 1050079 NC_000014.9 velvet.9206 99.93 True fake: scaffold gap size wrong estimation (local) 70797755 70798426 1051838 1052509 NC_000014.9 velvet.9206 99.85 True fake: scaffold gap size wrong estimation (local) 70799647 70801461 1054179 1055993 NC_000014.9 velvet.9206 99.94 True fake: scaffold gap size wrong estimation (local) 70801555 70803180 1056274 1057899 NC_000014.9 velvet.9206 99.94 True relocation, scaffold gap is present, inconsistency = -11806695 59008920 59011700 1070334 1073114 NC_000014.9 velvet.9206 99.71 True fake: scaffold gap size wrong estimation (local) 59011961 59013091 1073965 1075095 NC_000014.9 velvet.9206 99.91 True fake: scaffold gap size wrong estimation (local) 59013355 59026710 1075912 1089273 NC_000014.9 velvet.9206 99.35 True fake: scaffold gap size wrong estimation (local) 59027748 59031868 1091168 1095288 NC_000014.9 velvet.9206 99.95 True fake: not a misassembly (possible transposable element) 59036114 59037291 1096476 1095299 NC_000014.9 velvet.9206 100.0 True fake: not a misassembly (possible transposable element) 59032094 59033868 1096727 1098479 NC_000014.9 velvet.9206 98.7 True relocation, scaffold gap is present, inconsistency = 7140998 51885593 51888301 1103982 1101274 NC_000014.9 velvet.9206 99.85 True fake: scaffold gap size wrong estimation (local) 51874735 51880956 1110186 1103993 NC_000014.9 velvet.9206 99.5 True fake: scaffold gap size wrong estimation (local) 51844991 51847541 1136997 1134448 NC_000014.9 velvet.9206 99.76 True fake: scaffold gap size wrong estimation (local) 51842841 51844759 1140050 1138100 NC_000014.9 velvet.9206 99.1 True relocation, scaffold gap is present, inconsistency = -12344 51847882 51853901 1147448 1141334 NC_000014.9 velvet.9206 99.77 True fake: scaffold gap size wrong estimation (local) 51838445 51842651 1151654 1147459 NC_000014.9 velvet.9206 99.64 True fake: scaffold gap size wrong estimation (local) 51837638 51838176 1152824 1152286 NC_000014.9 velvet.9206 100.0 True fake: not a misassembly (possible transposable element) 45559850 45562243 1155228 1152835 NC_000014.9 velvet.9206 99.79 True fake: not a misassembly (possible transposable element) 51832353 51836846 1159733 1155239 NC_000014.9 velvet.9206 99.82 True relocation, scaffold gap is present, inconsistency = 147756 51670946 51683395 1160935 1174350 NC_000014.9 velvet.9206 99.85 True fake: scaffold gap size wrong estimation (local) 51683477 51690415 1174839 1182267 NC_000014.9 velvet.9206 99.87 True fake: scaffold gap size wrong estimation (local) 51696784 51701346 1182278 1186840 NC_000014.9 velvet.9206 99.91 True relocation, scaffold gap is present, inconsistency = -9371 51691986 51696674 1186851 1191585 NC_000014.9 velvet.9206 99.87 True fake: scaffold gap size wrong estimation (local) 51701545 51713204 1191596 1203255 NC_000014.9 velvet.9206 99.94 True fake: scaffold gap size wrong estimation (local) 51713482 51721514 1204327 1212480 NC_000014.9 velvet.9206 99.78 True fake: scaffold gap size wrong estimation (local) 51721792 51723550 1213556 1215314 NC_000014.9 velvet.9206 99.94 True relocation, scaffold gap is present, inconsistency = -6263276 45490890 45495148 1245930 1250151 NC_000014.9 velvet.9206 99.1 True inversion, scaffold gap is present 45488549 45489269 1251919 1251199 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 45486670 45487509 1254803 1253964 NC_000014.9 velvet.9206 99.88 True relocation, scaffold gap is present, inconsistency = 6263404 51753729 51756268 1257619 1260159 NC_000014.9 velvet.9206 99.69 True fake: scaffold gap size wrong estimation (local) 51756346 51758088 1261059 1262801 NC_000014.9 velvet.9206 99.77 True relocation, scaffold gap is present, inconsistency = 6222292 45532938 45534043 1263965 1262812 NC_000014.9 velvet.9206 99.27 True fake: scaffold gap size wrong estimation (local) 45525405 45527707 1272609 1270319 NC_000014.9 velvet.9206 99.3 True fake: scaffold gap size wrong estimation (extensive) 45513452 45514598 1276271 1275126 NC_000014.9 velvet.9206 99.83 True relocation, scaffold gap is present, inconsistency = -54354 45540043 45541079 1304034 1302998 NC_000014.9 velvet.9206 98.84 True local misassembly 45541122 45543172 1306095 1304045 NC_000014.9 velvet.9206 100.0 True inversion, scaffold gap is present 45535454 45539816 1306106 1310468 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = -9024 45530803 45532948 1310479 1312624 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = 6270598 51803557 51811025 1312635 1320103 NC_000014.9 velvet.9206 99.75 True relocation, scaffold gap is present, inconsistency = -6283153 45528010 45530488 1320241 1322807 NC_000014.9 velvet.9206 96.6 True relocation, scaffold gap is present, inconsistency = 6270135 51800634 51801780 1322818 1323964 NC_000014.9 velvet.9206 99.48 True fake: scaffold gap size wrong estimation (local) 51811067 51813020 1326616 1328480 NC_000014.9 velvet.9206 95.19 True relocation, scaffold gap is present, inconsistency = -23903 51789128 51790448 1328491 1329811 NC_000014.9 velvet.9206 99.92 True fake: scaffold gap size wrong estimation (local) 51790779 51794620 1330958 1334786 NC_000014.9 velvet.9206 99.4 True fake: not a misassembly (possible transposable element) 68853493 68855868 1358963 1356588 NC_000014.9 velvet.9206 99.92 True fake: not a misassembly (possible transposable element) 51825278 51829844 1358975 1363541 NC_000014.9 velvet.9206 99.78 True relocation, scaffold gap is present, inconsistency = -6260028 45570680 45572719 1364405 1366458 NC_000014.9 velvet.9206 97.14 True fake: not a misassembly (possible transposable element) 59073166 59074611 1368815 1367370 NC_000014.9 velvet.9206 99.65 True fake: not a misassembly (possible transposable element) 45573826 45576752 1368826 1371752 NC_000014.9 velvet.9206 99.9 True relocation, scaffold gap is present, inconsistency = 13486940 59063703 59071804 1380125 1371763 NC_000014.9 velvet.9206 98.25 True relocation, scaffold gap is present, inconsistency = 62850 58999850 59000585 1380393 1381128 NC_000014.9 velvet.9206 99.18 True relocation, scaffold gap is present, inconsistency = -7150772 51858710 51862999 1390025 1394314 NC_000014.9 velvet.9206 99.93 True relocation, scaffold gap is present, inconsistency = 7135963 59002550 59004651 1397902 1400002 NC_000014.9 velvet.9206 99.67 True relocation, scaffold gap is present, inconsistency = -13411802 45599083 45602222 1406236 1409690 NC_000014.9 velvet.9206 99.71 True fake: scaffold gap size wrong estimation (local) 45602446 45604615 1410656 1412825 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 45605063 45605685 1414260 1414882 NC_000014.9 velvet.9206 99.84 True fake: scaffold gap size wrong estimation (local) 45608281 45614501 1417895 1424115 NC_000014.9 velvet.9206 99.9 True relocation, scaffold gap is present, inconsistency = 13424192 59038704 59041891 1427313 1424126 NC_000014.9 velvet.9206 99.87 True fake: not a misassembly (possible transposable element) 59034026 59035892 1427336 1429202 NC_000014.9 velvet.9206 100.0 True fake: not a misassembly (possible transposable element) 59037323 59038193 1430083 1429213 NC_000014.9 velvet.9206 99.89 True relocation, scaffold gap is present, inconsistency = -5162159 64194566 64199471 1434999 1430094 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 64193469 64194479 1436163 1435153 NC_000014.9 velvet.9206 100.0 True fake: not a misassembly (possible transposable element) 77590684 77591691 1437514 1436507 NC_000014.9 velvet.9206 99.9 True fake: not a misassembly (possible transposable element) 64189966 64193363 1440942 1437525 NC_000014.9 velvet.9206 100.0 True fake: not a misassembly (possible transposable element) 77587764 77588445 1441634 1440953 NC_000014.9 velvet.9206 99.85 True fake: not a misassembly (possible transposable element) 64189271 64189918 1442939 1442292 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 64184343 64185470 1445370 1444243 NC_000014.9 velvet.9206 100.0 True local misassembly 64185791 64189072 1448662 1445381 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 64180774 64182355 1450325 1448744 NC_000014.9 velvet.9206 100.0 True fake: not a misassembly (possible transposable element) 45632192 45634462 1450336 1452606 NC_000014.9 velvet.9206 99.91 True fake: not a misassembly (possible transposable element) 64177068 64179236 1455043 1452877 NC_000014.9 velvet.9206 99.86 True relocation, scaffold gap is present, inconsistency = 18531893 45636473 45642818 1457400 1463771 NC_000014.9 velvet.9206 99.42 True fake: scaffold gap size wrong estimation (local) 45642946 45644717 1464568 1466339 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = 13359312 59006375 59008861 1471220 1468685 NC_000014.9 velvet.9206 99.96 True relocation, scaffold gap is present, inconsistency = 18545245 77554117 77555686 1471231 1472800 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 77556691 77558063 1474642 1476014 NC_000014.9 velvet.9206 99.93 True fake: not a misassembly (possible transposable element) 77552807 77553445 1477929 1477291 NC_000014.9 velvet.9206 100.0 True fake: not a misassembly (possible transposable element) 77559329 77560334 1479501 1480506 NC_000014.9 velvet.9206 99.7 True relocation, scaffold gap is present, inconsistency = 53212792 24344715 24345641 1482328 1481402 NC_000014.9 velvet.9206 99.89 True fake: scaffold gap size wrong estimation (local) 24343036 24344438 1483947 1482545 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = -15583 24356996 24357822 1485570 1484744 NC_000014.9 velvet.9206 99.88 True fake: scaffold gap size wrong estimation (local) 24355147 24355798 1488649 1487998 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = -27563742 51917923 51918878 1489615 1488660 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 51889342 51900036 1515745 1503586 NC_000014.9 velvet.9206 99.81 True fake: scaffold gap size wrong estimation (local) 51888461 51889014 1516550 1515997 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 51883027 51885580 1519114 1516561 NC_000014.9 velvet.9206 99.96 True fake: scaffold gap size wrong estimation (local) 51881796 51882764 1520942 1519974 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = 27539789 24333501 24341996 1529448 1520953 NC_000014.9 velvet.9206 99.93 True fake: scaffold gap size wrong estimation (local) 24328397 24333227 1535340 1530441 NC_000014.9 velvet.9206 99.65 True fake: scaffold gap size wrong estimation (local) 24327166 24328237 1537340 1536271 NC_000014.9 velvet.9206 99.63 True fake: scaffold gap size wrong estimation (local) 24324971 24326566 1539904 1538311 NC_000014.9 velvet.9206 99.69 True fake: scaffold gap size wrong estimation (local) 24321499 24324712 1544142 1540929 NC_000014.9 velvet.9206 99.84 True fake: scaffold gap size wrong estimation (local) 24313836 24321009 1552710 1545451 NC_000014.9 velvet.9206 99.94 True fake: scaffold gap size wrong estimation (local) 24298314 24313563 1570045 1553804 NC_000014.9 velvet.9206 99.51 True fake: scaffold gap size wrong estimation (local) 24282163 24283317 1581604 1580450 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 24276378 24281928 1588234 1582690 NC_000014.9 velvet.9206 99.89 True fake: scaffold gap size wrong estimation (local) 24275178 24276116 1590045 1589107 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 24273445 24274597 1591949 1590797 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = -76705615 100946971 100953072 1624062 1617937 NC_000014.9 velvet.9206 99.25 True relocation, scaffold gap is present, inconsistency = 27843301 73101543 73103659 1624073 1626189 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = 8421783 81525453 81527464 1626200 1628211 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = 32746235 48778571 48779207 1628858 1628222 NC_000014.9 velvet.9206 99.84 True relocation, scaffold gap is present, inconsistency = 24524644 24247501 24253430 1635321 1629355 NC_000014.9 velvet.9206 98.37 True relocation, scaffold gap is present, inconsistency = -4621951 28866902 28869441 1637871 1635332 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = 46362802 75232254 75233003 1637882 1638631 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = 50959072 24253755 24273171 1658058 1638642 NC_000014.9 velvet.9206 99.98 True relocation, scaffold gap is present, inconsistency = -11437041 35685770 35690785 1663084 1658069 NC_000014.9 velvet.9206 99.98 True fake: scaffold gap size wrong estimation (local) 35684694 35685638 1664973 1664029 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = 11425508 24241615 24243207 1682544 1680952 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 24232404 24241343 1692585 1683646 NC_000014.9 velvet.9206 99.97 True fake: scaffold gap size wrong estimation (local) 24204056 24205285 1718789 1717560 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = -14700 24217564 24218745 1719981 1718800 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 24215351 24217269 1723030 1721112 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 24209182 24210923 1724782 1723041 NC_000014.9 velvet.9206 99.89 True local misassembly 24212921 24214866 1726941 1724996 NC_000014.9 velvet.9206 99.85 True fake: scaffold gap size wrong estimation (local) 24205574 24208594 1729972 1726952 NC_000014.9 velvet.9206 100.0 True local misassembly 24211186 24212125 1730922 1729983 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 24193945 24196819 1746780 1743906 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = -8972 24198583 24199490 1751114 1750207 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 24171558 24173890 1776791 1774459 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = -63105 24231167 24232241 1780330 1779213 NC_000014.9 velvet.9206 99.54 True fake: scaffold gap size wrong estimation (local) 24226448 24227810 1787593 1786231 NC_000014.9 velvet.9206 99.85 True fake: scaffold gap size wrong estimation (local) 24225164 24225756 1790036 1789444 NC_000014.9 velvet.9206 98.15 True fake: scaffold gap size wrong estimation (local) 24224338 24224891 1790679 1790126 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 24191936 24193375 1820086 1818651 NC_000014.9 velvet.9206 99.72 True fake: scaffold gap size wrong estimation (local) 24191137 24191796 1820966 1820307 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 24176458 24190846 1836339 1821951 NC_000014.9 velvet.9206 99.98 True fake: scaffold gap size wrong estimation (local) 24156780 24158758 1855932 1853954 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 24154536 24156415 1859125 1857246 NC_000014.9 velvet.9206 100.0 True relocation, scaffold gap is present, inconsistency = -16427 24169160 24169828 1860928 1860260 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 24167411 24168071 1863170 1862510 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 24163817 24167113 1867459 1864068 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 24162799 24163660 1868983 1868122 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 24159584 24162517 1874343 1871410 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 24149209 24152460 1880922 1877671 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 24142705 24148966 1888239 1881978 NC_000014.9 velvet.9206 99.94 True fake: not a misassembly (possible transposable element) 24243627 24244167 1888250 1888790 NC_000014.9 velvet.9206 100.0 True fake: not a misassembly (possible transposable element) 24140584 24142428 1894429 1892585 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 24135113 24140291 1900696 1895520 NC_000014.9 velvet.9206 99.96 True fake: scaffold gap size wrong estimation (local) 24120538 24121945 1913427 1912020 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 24113358 24120239 1921478 1914586 NC_000014.9 velvet.9206 99.44 True fake: scaffold gap size wrong estimation (local) 24109689 24111408 1925829 1924173 NC_000014.9 velvet.9206 96.32 True fake: scaffold gap size wrong estimation (local) 24108597 24109412 1927910 1927095 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 24106716 24108397 1929840 1928159 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 24105896 24106471 1931275 1930700 NC_000014.9 velvet.9206 100.0 True fake: scaffold gap size wrong estimation (local) 24104669 24105638 1932446 1931477 NC_000014.9 velvet.9206 99.79 True fake: scaffold gap size wrong estimation (local) 24102203 24104309 1935466 1933316 NC_000014.9 velvet.9206 100.0 True CONTIG velvet.9206 1935541 misassembled CONTIG velvet.9215 1705 unaligned 105545849 105546967 1119 1 NC_000014.9 velvet.9225 99.91 True CONTIG velvet.9225 1119 correct CONTIG velvet.9235 280 unaligned CONTIG velvet.9246 307 unaligned 21164350 21165325 976 1 NC_000014.9 velvet.9256 99.69 True CONTIG velvet.9256 976 correct CONTIG velvet.9257 300 unaligned 86596595 86597932 1 1338 NC_000014.9 velvet.9260 99.93 True CONTIG velvet.9260 1338 correct CONTIG velvet.9261 362 unaligned CONTIG velvet.9277 428 unaligned 20209065 20211176 2738 303 NC_000014.9 velvet.9278 99.86 True fake: scaffold gap size wrong estimation (local) 20203216 20208780 9303 3741 NC_000014.9 velvet.9278 99.86 True fake: scaffold gap size wrong estimation (local) 20202455 20203135 10129 9454 NC_000014.9 velvet.9278 98.83 True fake: scaffold gap size wrong estimation (local) 20201501 20202215 11639 10925 NC_000014.9 velvet.9278 100.0 True fake: scaffold gap size wrong estimation (local) 20195512 20197761 13899 11650 NC_000014.9 velvet.9278 99.82 True fake: scaffold gap size wrong estimation (local) 20193235 20195253 17162 15101 NC_000014.9 velvet.9278 99.85 True fake: scaffold gap size wrong estimation (local) 20192004 20193132 18950 17823 NC_000014.9 velvet.9278 99.56 True fake: scaffold gap size wrong estimation (local) 20189181 20191877 21845 19149 NC_000014.9 velvet.9278 99.93 True fake: scaffold gap size wrong estimation (local) 20187221 20188442 24501 23280 NC_000014.9 velvet.9278 99.92 True fake: scaffold gap size wrong estimation (local) 20185783 20186905 26305 25183 NC_000014.9 velvet.9278 100.0 True relocation, scaffold gap is present, inconsistency = 75238382 95425298 95426742 26316 27760 NC_000014.9 velvet.9278 99.52 True fake: scaffold gap size wrong estimation (local) 95437690 95443686 36232 42178 NC_000014.9 velvet.9278 98.9 True fake: scaffold gap size wrong estimation (local) 95443964 95447148 43288 46471 NC_000014.9 velvet.9278 99.65 True fake: scaffold gap size wrong estimation (local) 95447440 95448376 47270 48206 NC_000014.9 velvet.9278 99.47 True fake: scaffold gap size wrong estimation (local) 95448681 95456841 49044 57229 NC_000014.9 velvet.9278 99.21 True fake: scaffold gap size wrong estimation (local) 95457139 95459455 58387 60703 NC_000014.9 velvet.9278 99.83 True fake: scaffold gap size wrong estimation (extensive) 95466917 95469459 60714 63255 NC_000014.9 velvet.9278 99.65 True local misassembly 95463161 95466758 63266 66871 NC_000014.9 velvet.9278 99.0 True fake: scaffold gap size wrong estimation (local) 95469667 95470380 66882 67595 NC_000014.9 velvet.9278 100.0 True fake: scaffold gap size wrong estimation (local) 95470997 95472352 67630 68985 NC_000014.9 velvet.9278 99.71 True fake: scaffold gap size wrong estimation (local) 95472353 95473651 69132 70430 NC_000014.9 velvet.9278 98.08 True local misassembly 95474072 95475371 70431 71730 NC_000014.9 velvet.9278 99.92 True indel: indel (<= 5bp) 95475372 95477195 71732 73555 NC_000014.9 velvet.9278 99.89 True indel: indel (<= 5bp) 95477198 95477747 73556 74105 NC_000014.9 velvet.9278 99.45 True indel: indel (<= 5bp) 95477749 95479144 74106 75501 NC_000014.9 velvet.9278 99.64 True fake: scaffold gap size wrong estimation (local) 95479232 95480394 75626 76788 NC_000014.9 velvet.9278 97.08 True fake: scaffold gap size wrong estimation (local) 95480784 95482204 77894 79314 NC_000014.9 velvet.9278 99.09 True fake: not a misassembly (possible transposable element) 95460519 95462915 79325 81722 NC_000014.9 velvet.9278 99.83 True fake: not a misassembly (possible transposable element) 95488754 95489656 90919 91821 NC_000014.9 velvet.9278 100.0 True fake: scaffold gap size wrong estimation (local) 95498511 95499876 96923 98288 NC_000014.9 velvet.9278 99.93 True relocation, scaffold gap is present, inconsistency = -2775908 92726269 92727174 100589 101494 NC_000014.9 velvet.9278 100.0 True local misassembly 92727450 92728171 101495 102216 NC_000014.9 velvet.9278 98.48 True fake: not a misassembly (possible transposable element) 85155529 85156764 103502 102267 NC_000014.9 velvet.9278 99.92 True fake: not a misassembly (possible transposable element) 92728192 92729148 103513 104469 NC_000014.9 velvet.9278 100.0 True fake: scaffold gap size wrong estimation (local) 92729496 92730689 105864 107057 NC_000014.9 velvet.9278 99.16 True fake: scaffold gap size wrong estimation (local) 92730965 92732895 108090 110020 NC_000014.9 velvet.9278 99.95 True fake: scaffold gap size wrong estimation (local) 92736588 92738295 110031 111738 NC_000014.9 velvet.9278 100.0 True relocation, scaffold gap is present, inconsistency = 10731401 103470717 103471768 113810 112759 NC_000014.9 velvet.9278 98.95 True fake: scaffold gap size wrong estimation (local) 103468588 103469162 116840 116266 NC_000014.9 velvet.9278 98.09 True local misassembly 103467675 103468286 117452 116841 NC_000014.9 velvet.9278 100.0 True relocation, scaffold gap is present, inconsistency = 7972816 95489732 95494848 117463 122693 NC_000014.9 velvet.9278 99.86 True fake: scaffold gap size wrong estimation (local) 95500160 95510624 122704 133388 NC_000014.9 velvet.9278 99.76 True relocation, scaffold gap is present, inconsistency = -15488 95495147 95498042 133399 136292 NC_000014.9 velvet.9278 99.45 True relocation, scaffold gap is present, inconsistency = -2753242 92779561 92780153 171053 171645 NC_000014.9 velvet.9278 99.66 True relocation, scaffold gap is present, inconsistency = 10702356 103482520 103484145 173281 171656 NC_000014.9 velvet.9278 99.94 True fake: scaffold gap size wrong estimation (local) 103480146 103481751 176583 174984 NC_000014.9 velvet.9278 99.31 True fake: scaffold gap size wrong estimation (local) 103475945 103477211 183959 182693 NC_000014.9 velvet.9278 99.68 True fake: scaffold gap size wrong estimation (local) 103472992 103473928 187628 186692 NC_000014.9 velvet.9278 99.89 True relocation, scaffold gap is present, inconsistency = 10732866 92739050 92739997 187757 188704 NC_000014.9 velvet.9278 100.0 True local misassembly 92740264 92740931 188705 189372 NC_000014.9 velvet.9278 98.5 True relocation, scaffold gap is present, inconsistency = 10723896 103465217 103466719 191264 189762 NC_000014.9 velvet.9278 99.93 True fake: scaffold gap size wrong estimation (local) 103436131 103436809 216430 215752 NC_000014.9 velvet.9278 100.0 True local misassembly 103437394 103438012 217061 216443 NC_000014.9 velvet.9278 99.68 True relocation, scaffold gap is present, inconsistency = 10663521 92772293 92773862 217072 218641 NC_000014.9 velvet.9278 99.94 True relocation, scaffold gap is present, inconsistency = 10668497 103442370 103444490 220823 218652 NC_000014.9 velvet.9278 99.81 True relocation, scaffold gap is present, inconsistency = -14498 103455729 103456857 221962 220834 NC_000014.9 velvet.9278 99.91 True fake: scaffold gap size wrong estimation (local) 103454509 103455444 223206 222271 NC_000014.9 velvet.9278 99.79 True relocation, scaffold gap is present, inconsistency = 18663 103409450 103410988 249602 248064 NC_000014.9 velvet.9278 99.74 True fake: scaffold gap size wrong estimation (extensive) 103400973 103402269 250973 249677 NC_000014.9 velvet.9278 99.23 True local misassembly 103400200 103400765 251539 250974 NC_000014.9 velvet.9278 100.0 True relocation, scaffold gap is present, inconsistency = -31206 103427498 103430939 255379 252006 NC_000014.9 velvet.9278 97.89 True fake: scaffold gap size wrong estimation (local) 103391816 103392787 287193 286222 NC_000014.9 velvet.9278 98.87 True local misassembly 103390829 103391526 287891 287194 NC_000014.9 velvet.9278 99.86 True fake: scaffold gap size wrong estimation (local) 103388203 103389083 291472 290592 NC_000014.9 velvet.9278 100.0 True fake: scaffold gap size wrong estimation (local) 103385755 103387467 295013 293301 NC_000014.9 velvet.9278 99.36 True local misassembly 103380755 103383185 297701 295014 NC_000014.9 velvet.9278 99.96 True local misassembly 103384101 103385754 299368 297715 NC_000014.9 velvet.9278 99.82 True relocation, scaffold gap is present, inconsistency = 12940 103369577 103370260 300952 300269 NC_000014.9 velvet.9278 99.85 True relocation, scaffold gap is present, inconsistency = 68490552 34877747 34878616 302230 301361 NC_000014.9 velvet.9278 99.89 True relocation, scaffold gap is present, inconsistency = -68504757 103361657 103362837 323077 321897 NC_000014.9 velvet.9278 98.98 True fake: scaffold gap size wrong estimation (extensive) 103352178 103353090 324951 324012 NC_000014.9 velvet.9278 98.08 True relocation, scaffold gap is present, inconsistency = -10274 103360099 103360936 327304 326467 NC_000014.9 velvet.9278 100.0 True fake: scaffold gap size wrong estimation (extensive) 103349689 103350935 328617 327371 NC_000014.9 velvet.9278 99.92 True fake: scaffold gap size wrong estimation (local) 103348699 103349286 329489 328902 NC_000014.9 velvet.9278 100.0 True fake: scaffold gap size wrong estimation (local) 103346807 103347882 332175 331104 NC_000014.9 velvet.9278 99.53 True relocation, scaffold gap is present, inconsistency = -12097 103356864 103357533 334259 333546 NC_000014.9 velvet.9278 98.18 True fake: scaffold gap size wrong estimation (local) 103355434 103356701 336574 335307 NC_000014.9 velvet.9278 99.92 True fake: scaffold gap size wrong estimation (local) 103354089 103355097 338014 337006 NC_000014.9 velvet.9278 100.0 True relocation, scaffold gap is present, inconsistency = -335741 103684139 103688190 343705 339654 NC_000014.9 velvet.9278 99.98 True fake: scaffold gap size wrong estimation (local) 103682645 103683906 345956 344702 NC_000014.9 velvet.9278 99.36 True fake: scaffold gap size wrong estimation (local) 103680278 103681486 349102 347894 NC_000014.9 velvet.9278 99.92 True relocation, scaffold gap is present, inconsistency = 56091304 47578169 47588235 359907 349841 NC_000014.9 velvet.9278 99.91 True relocation, scaffold gap is present, inconsistency = -36172101 83740589 83748360 369588 361817 NC_000014.9 velvet.9278 99.85 True fake: not a misassembly (possible transposable element) 103676531 103677687 372893 371737 NC_000014.9 velvet.9278 99.83 True fake: not a misassembly (possible transposable element) 83730080 83734498 377633 372904 NC_000014.9 velvet.9278 99.63 True fake: scaffold gap size wrong estimation (local) 83720355 83729653 388022 378630 NC_000014.9 velvet.9278 99.86 True fake: scaffold gap size wrong estimation (extensive) 83707714 83709129 392804 391389 NC_000014.9 velvet.9278 97.81 True fake: scaffold gap size wrong estimation (local) 83705327 83707713 395414 393028 NC_000014.9 velvet.9278 99.54 True fake: scaffold gap size wrong estimation (local) 83700277 83704505 405845 401617 NC_000014.9 velvet.9278 99.88 True relocation, scaffold gap is present, inconsistency = -13359 83710975 83713625 408506 405856 NC_000014.9 velvet.9278 99.85 True fake: scaffold gap size wrong estimation (local) 83696725 83700013 418290 415002 NC_000014.9 velvet.9278 99.85 True fake: scaffold gap size wrong estimation (local) 83685113 83696438 430627 419350 NC_000014.9 velvet.9278 99.5 True fake: scaffold gap size wrong estimation (local) 83678424 83684955 438080 431552 NC_000014.9 velvet.9278 99.95 True CONTIG velvet.9278 438080 misassembled 34781761 34782378 1 618 NC_000014.9 velvet.9292 100.0 True CONTIG velvet.9292 3789 correct CONTIG velvet.9293 33993 unaligned 55788066 55788612 1 547 NC_000014.9 velvet.9300 100.0 True CONTIG velvet.9300 547 correct CONTIG velvet.9301 281 unaligned CONTIG velvet.9309 260 unaligned 68348850 68349416 1 567 NC_000014.9 velvet.9312 100.0 True CONTIG velvet.9312 567 correct 58433330 58433971 1 636 NC_000014.9 velvet.9313 99.07 True CONTIG velvet.9313 636 correct 106322524 106323313 1 790 NC_000014.9 velvet.9320 99.87 True CONTIG velvet.9320 790 correct CONTIG velvet.9325 212 unaligned CONTIG velvet.9326 263 unaligned CONTIG velvet.9327 326 unaligned CONTIG velvet.9333 214 unaligned CONTIG velvet.9347 427 unaligned 19412007 19412861 1 855 NC_000014.9 velvet.9370 100.0 True CONTIG velvet.9370 855 correct CONTIG velvet.9380 214 unaligned 19474012 19475138 1 1127 NC_000014.9 velvet.9382 99.91 True CONTIG velvet.9382 1127 correct 65108718 65110076 1359 1 NC_000014.9 velvet.9418 99.19 True fake: scaffold gap size wrong estimation (local) 65107185 65107975 2230 1440 NC_000014.9 velvet.9418 99.75 True CONTIG velvet.9418 2230 correct CONTIG velvet.9478 308 unaligned 84684008 84684582 15 589 NC_000014.9 velvet.9486 100.0 True CONTIG velvet.9486 589 correct CONTIG velvet.9497 287 unaligned CONTIG velvet.9504 356 unaligned CONTIG velvet.9505 368 unaligned CONTIG velvet.9507 214 unaligned 102030918 102031697 780 1 NC_000014.9 velvet.9521 100.0 True CONTIG velvet.9521 780 correct CONTIG velvet.9528 383 unaligned 19292250 19293286 1 1037 NC_000014.9 velvet.9533 99.61 True CONTIG velvet.9533 1037 correct CONTIG velvet.9540 295 unaligned CONTIG velvet.9545 251 unaligned CONTIG velvet.9551 462 unaligned CONTIG velvet.9552 423 unaligned CONTIG velvet.9569 312 unaligned CONTIG velvet.9584 257 unaligned 19270504 19272106 1 1603 NC_000014.9 velvet.9588 99.63 True CONTIG velvet.9588 1603 correct CONTIG velvet.9602 205 unaligned CONTIG velvet.9609 270 unaligned 106401608 106402711 1104 1 NC_000014.9 velvet.9643 99.28 True CONTIG velvet.9643 1104 correct 100970594 100977753 8813 904 NC_000014.9 velvet.9644 99.8 True fake: scaffold gap size wrong estimation (local) 100965753 100970343 14882 9772 NC_000014.9 velvet.9644 99.78 True fake: scaffold gap size wrong estimation (local) 100961439 100965087 20343 16003 NC_000014.9 velvet.9644 99.81 True fake: scaffold gap size wrong estimation (local) 100960181 100961260 21816 20737 NC_000014.9 velvet.9644 100.0 True fake: scaffold gap size wrong estimation (local) 100953699 100959935 28839 22603 NC_000014.9 velvet.9644 99.9 True relocation, scaffold gap is present, inconsistency = 18359 100978305 100985088 28850 35595 NC_000014.9 velvet.9644 99.34 True fake: scaffold gap size wrong estimation (local) 100985362 100990846 36400 42407 NC_000014.9 velvet.9644 99.36 True fake: scaffold gap size wrong estimation (local) 100992431 100994422 44299 46290 NC_000014.9 velvet.9644 99.9 True fake: scaffold gap size wrong estimation (local) 100994714 100995860 47498 48641 NC_000014.9 velvet.9644 98.87 True local misassembly 100991160 100992248 49131 50219 NC_000014.9 velvet.9644 100.0 True fake: scaffold gap size wrong estimation (local) 100996632 101006778 50230 60376 NC_000014.9 velvet.9644 99.93 True fake: scaffold gap size wrong estimation (local) 101007063 101012794 61224 66895 NC_000014.9 velvet.9644 98.92 True fake: scaffold gap size wrong estimation (local) 101013090 101014361 67812 69083 NC_000014.9 velvet.9644 100.0 True fake: scaffold gap size wrong estimation (local) 101014632 101019854 69802 75024 NC_000014.9 velvet.9644 100.0 True fake: scaffold gap size wrong estimation (local) 101020272 101034506 75570 90562 NC_000014.9 velvet.9644 99.51 True fake: scaffold gap size wrong estimation (local) 101034731 101036568 91503 93340 NC_000014.9 velvet.9644 100.0 True fake: scaffold gap size wrong estimation (local) 101037043 101038204 94405 95566 NC_000014.9 velvet.9644 100.0 True fake: scaffold gap size wrong estimation (local) 101038672 101079842 96435 138176 NC_000014.9 velvet.9644 99.72 True fake: not a misassembly (possible transposable element) 64576340 64577711 156730 155359 NC_000014.9 velvet.9644 99.93 True fake: not a misassembly (possible transposable element) 101102522 101105047 157297 159822 NC_000014.9 velvet.9644 99.88 True relocation, scaffold gap is present, inconsistency = 36527373 64572024 64573629 162947 161342 NC_000014.9 velvet.9644 99.88 True local misassembly 64574300 64575637 164295 162958 NC_000014.9 velvet.9644 99.7 True relocation, scaffold gap is present, inconsistency = 36530447 101106095 101107052 164306 165257 NC_000014.9 velvet.9644 99.27 True fake: scaffold gap size wrong estimation (local) 101107188 101117635 166209 176641 NC_000014.9 velvet.9644 99.5 True fake: scaffold gap size wrong estimation (local) 101117735 101130211 177720 190022 NC_000014.9 velvet.9644 98.27 True fake: scaffold gap size wrong estimation (local) 101130762 101138309 191426 199093 NC_000014.9 velvet.9644 99.84 True fake: scaffold gap size wrong estimation (local) 101138512 101142393 200105 203986 NC_000014.9 velvet.9644 99.87 True fake: scaffold gap size wrong estimation (local) 101145485 101148803 205190 208507 NC_000014.9 velvet.9644 99.94 True fake: scaffold gap size wrong estimation (local) 101172960 101179010 235640 241690 NC_000014.9 velvet.9644 99.85 True relocation, scaffold gap is present, inconsistency = -11555 101167466 101169006 241701 243320 NC_000014.9 velvet.9644 97.75 True fake: scaffold gap size wrong estimation (local) 101169223 101172106 244133 247016 NC_000014.9 velvet.9644 99.86 True fake: scaffold gap size wrong estimation (extensive) 101190037 101196155 272635 278753 NC_000014.9 velvet.9644 99.97 True relocation, scaffold gap is present, inconsistency = -16930 101179244 101189867 278772 289371 NC_000014.9 velvet.9644 99.51 True relocation, scaffold gap is present, inconsistency = -16153 101196188 101199250 311845 314937 NC_000014.9 velvet.9644 98.91 True fake: scaffold gap size wrong estimation (local) 101200047 101202348 314948 317249 NC_000014.9 velvet.9644 99.83 True fake: scaffold gap size wrong estimation (local) 101202631 101204974 318579 320902 NC_000014.9 velvet.9644 98.89 True fake: scaffold gap size wrong estimation (local) 101206323 101207310 323031 324018 NC_000014.9 velvet.9644 99.9 True fake: scaffold gap size wrong estimation (local) 101215049 101218674 328077 331706 NC_000014.9 velvet.9644 99.86 True relocation, scaffold gap is present, inconsistency = -12329 101209355 101211218 334716 336580 NC_000014.9 velvet.9644 99.73 True fake: scaffold gap size wrong estimation (local) 101218964 101220861 337538 339435 NC_000014.9 velvet.9644 99.26 True local misassembly 101220862 101224205 341168 344511 NC_000014.9 velvet.9644 99.49 True fake: scaffold gap size wrong estimation (local) 101224427 101229951 345539 351881 NC_000014.9 velvet.9644 99.93 True fake: scaffold gap size wrong estimation (local) 101230175 101237684 352802 360311 NC_000014.9 velvet.9644 99.87 True fake: scaffold gap size wrong estimation (local) 101237902 101239830 361295 363223 NC_000014.9 velvet.9644 99.9 True indel: indel (<= 5bp) 101239831 101241705 363225 365099 NC_000014.9 velvet.9644 99.89 True fake: scaffold gap size wrong estimation (local) 101241706 101245123 365214 368631 NC_000014.9 velvet.9644 99.27 True local misassembly 101246728 101252341 368632 374245 NC_000014.9 velvet.9644 99.88 True fake: scaffold gap size wrong estimation (local) 101252342 101253802 374413 375873 NC_000014.9 velvet.9644 98.22 True fake: scaffold gap size wrong estimation (local) 101254033 101261321 376887 384175 NC_000014.9 velvet.9644 99.9 True fake: scaffold gap size wrong estimation (local) 101261590 101265366 385273 389049 NC_000014.9 velvet.9644 99.95 True fake: scaffold gap size wrong estimation (local) 101265639 101266227 389932 390520 NC_000014.9 velvet.9644 99.83 True fake: scaffold gap size wrong estimation (local) 101272248 101273941 395890 397583 NC_000014.9 velvet.9644 99.88 True fake: scaffold gap size wrong estimation (local) 101274227 101274972 398230 398975 NC_000014.9 velvet.9644 99.73 True fake: scaffold gap size wrong estimation (local) 101275231 101278689 399794 403132 NC_000014.9 velvet.9644 96.47 True fake: scaffold gap size wrong estimation (local) 101279185 101280833 404300 405948 NC_000014.9 velvet.9644 99.88 True fake: scaffold gap size wrong estimation (local) 101281099 101283803 406804 409508 NC_000014.9 velvet.9644 99.85 True fake: scaffold gap size wrong estimation (local) 101284010 101293389 410463 420000 NC_000014.9 velvet.9644 99.8 True fake: scaffold gap size wrong estimation (local) 101293593 101294833 420996 422223 NC_000014.9 velvet.9644 97.6 True fake: scaffold gap size wrong estimation (local) 101297247 101298707 424702 426196 NC_000014.9 velvet.9644 98.11 True fake: scaffold gap size wrong estimation (local) 101299575 101305287 427932 433682 NC_000014.9 velvet.9644 99.21 True fake: scaffold gap size wrong estimation (local) 101311320 101314441 435370 438496 NC_000014.9 velvet.9644 99.9 True fake: scaffold gap size wrong estimation (local) 101314710 101315874 439624 440788 NC_000014.9 velvet.9644 99.74 True fake: scaffold gap size wrong estimation (local) 101316108 101318158 442184 444234 NC_000014.9 velvet.9644 99.66 True fake: scaffold gap size wrong estimation (local) 101321372 101324854 447301 450783 NC_000014.9 velvet.9644 100.0 True local misassembly 101325151 101326628 450784 452261 NC_000014.9 velvet.9644 99.26 True local misassembly 101320121 101321369 452272 453520 NC_000014.9 velvet.9644 100.0 True fake: scaffold gap size wrong estimation (local) 101326870 101327988 453570 454688 NC_000014.9 velvet.9644 99.91 True fake: scaffold gap size wrong estimation (local) 101328270 101338655 455606 465991 NC_000014.9 velvet.9644 99.98 True fake: scaffold gap size wrong estimation (local) 101338842 101347649 467018 476131 NC_000014.9 velvet.9644 97.12 True fake: scaffold gap size wrong estimation (local) 101347970 101352364 477281 481675 NC_000014.9 velvet.9644 99.86 True relocation, scaffold gap is present, inconsistency = -51283240 50069135 50070115 481686 482666 NC_000014.9 velvet.9644 99.8 True fake: scaffold gap size wrong estimation (local) 50071728 50072842 485138 486252 NC_000014.9 velvet.9644 100.0 True relocation, scaffold gap is present, inconsistency = 51280314 101353167 101356809 486263 489904 NC_000014.9 velvet.9644 99.84 True fake: scaffold gap size wrong estimation (local) 101356986 101366346 491074 500162 NC_000014.9 velvet.9644 96.12 True fake: scaffold gap size wrong estimation (local) 101366610 101377665 501346 512404 NC_000014.9 velvet.9644 99.85 True fake: scaffold gap size wrong estimation (local) 101377925 101380096 513377 515607 NC_000014.9 velvet.9644 97.25 True fake: scaffold gap size wrong estimation (local) 101380196 101386148 516306 523016 NC_000014.9 velvet.9644 99.76 True fake: scaffold gap size wrong estimation (local) 101387587 101391057 525249 528719 NC_000014.9 velvet.9644 99.91 True fake: scaffold gap size wrong estimation (local) 101391174 101396746 529688 535251 NC_000014.9 velvet.9644 99.66 True fake: scaffold gap size wrong estimation (local) 101397030 101397812 536118 536900 NC_000014.9 velvet.9644 100.0 True fake: scaffold gap size wrong estimation (local) 101397901 101401827 537180 541329 NC_000014.9 velvet.9644 99.92 True fake: scaffold gap size wrong estimation (local) 101402286 101413528 542529 554082 NC_000014.9 velvet.9644 99.89 True fake: scaffold gap size wrong estimation (local) 101413657 101419332 555038 560713 NC_000014.9 velvet.9644 99.91 True fake: scaffold gap size wrong estimation (local) 101419898 101420623 561574 562299 NC_000014.9 velvet.9644 100.0 True fake: scaffold gap size wrong estimation (local) 101420881 101426249 563159 568527 NC_000014.9 velvet.9644 99.98 True fake: scaffold gap size wrong estimation (local) 101426520 101428849 569595 571924 NC_000014.9 velvet.9644 100.0 True fake: scaffold gap size wrong estimation (local) 101430184 101432282 574058 576156 NC_000014.9 velvet.9644 96.62 True fake: scaffold gap size wrong estimation (local) 101432283 101433782 576808 578307 NC_000014.9 velvet.9644 99.07 True fake: scaffold gap size wrong estimation (local) 101434072 101434622 578861 579411 NC_000014.9 velvet.9644 99.82 True fake: scaffold gap size wrong estimation (local) 101434907 101436693 580133 581919 NC_000014.9 velvet.9644 99.89 True fake: scaffold gap size wrong estimation (local) 101436889 101440313 582894 586318 NC_000014.9 velvet.9644 99.71 True local misassembly 101440314 101443296 587286 590268 NC_000014.9 velvet.9644 99.97 True fake: scaffold gap size wrong estimation (extensive) 101452278 101454878 590447 593047 NC_000014.9 velvet.9644 99.92 True relocation, scaffold gap is present, inconsistency = -10042 101444847 101447701 593058 595912 NC_000014.9 velvet.9644 99.96 True local misassembly 101443579 101444557 595923 596901 NC_000014.9 velvet.9644 99.9 True fake: scaffold gap size wrong estimation (local) 101447983 101450855 599010 602393 NC_000014.9 velvet.9644 99.89 True fake: scaffold gap size wrong estimation (extensive) 101468265 101471199 611145 614079 NC_000014.9 velvet.9644 99.73 True fake: scaffold gap size wrong estimation (local) 101480228 101489300 621308 630501 NC_000014.9 velvet.9644 99.32 True relocation, scaffold gap is present, inconsistency = -34181 101455130 101467760 630512 644299 NC_000014.9 velvet.9644 99.83 True fake: scaffold gap size wrong estimation (local) 101471480 101480199 651557 660264 NC_000014.9 velvet.9644 99.75 True relocation, scaffold gap is present, inconsistency = -43026991 58453219 58457309 660275 664427 NC_000014.9 velvet.9644 99.66 True fake: scaffold gap size wrong estimation (local) 58457572 58462263 665436 670127 NC_000014.9 velvet.9644 99.85 True fake: scaffold gap size wrong estimation (extensive) 58471083 58473618 671780 674313 NC_000014.9 velvet.9644 99.72 True fake: scaffold gap size wrong estimation (local) 58473906 58475852 675410 677356 NC_000014.9 velvet.9644 99.74 True fake: scaffold gap size wrong estimation (local) 58476116 58476685 678020 678589 NC_000014.9 velvet.9644 99.65 True fake: scaffold gap size wrong estimation (local) 58476938 58478237 679126 680425 NC_000014.9 velvet.9644 99.92 True fake: scaffold gap size wrong estimation (local) 58478480 58481862 680736 684829 NC_000014.9 velvet.9644 99.82 True fake: scaffold gap size wrong estimation (local) 58482427 58484866 686113 688582 NC_000014.9 velvet.9644 99.87 True fake: scaffold gap size wrong estimation (local) 58485226 58486435 689847 691056 NC_000014.9 velvet.9644 99.92 True relocation, scaffold gap is present, inconsistency = 43002865 101489311 101489892 691067 691648 NC_000014.9 velvet.9644 99.66 True fake: scaffold gap size wrong estimation (local) 101490329 101491940 692778 694389 NC_000014.9 velvet.9644 99.81 True fake: scaffold gap size wrong estimation (local) 101492062 101494003 694618 696559 NC_000014.9 velvet.9644 99.95 True fake: scaffold gap size wrong estimation (local) 101494168 101495655 697468 698955 NC_000014.9 velvet.9644 99.8 True fake: scaffold gap size wrong estimation (local) 101495749 101523936 699107 728198 NC_000014.9 velvet.9644 99.96 True fake: scaffold gap size wrong estimation (local) 101524869 101544986 729807 749924 NC_000014.9 velvet.9644 99.97 True fake: scaffold gap size wrong estimation (local) 101545071 101555728 750767 761210 NC_000014.9 velvet.9644 97.97 True fake: scaffold gap size wrong estimation (local) 101555924 101560514 762169 766759 NC_000014.9 velvet.9644 100.0 True fake: scaffold gap size wrong estimation (local) 101561292 101570111 768317 777572 NC_000014.9 velvet.9644 100.0 True fake: scaffold gap size wrong estimation (local) 101570387 101571930 778474 780017 NC_000014.9 velvet.9644 100.0 True local misassembly 101572494 101576106 780035 783647 NC_000014.9 velvet.9644 100.0 True fake: scaffold gap size wrong estimation (local) 101576274 101580251 784453 788430 NC_000014.9 velvet.9644 100.0 True fake: scaffold gap size wrong estimation (local) 101580956 101582562 789883 791489 NC_000014.9 velvet.9644 100.0 True fake: scaffold gap size wrong estimation (local) 101582857 101584906 792555 794604 NC_000014.9 velvet.9644 100.0 True fake: scaffold gap size wrong estimation (local) 101585164 101592193 795642 802671 NC_000014.9 velvet.9644 100.0 True fake: scaffold gap size wrong estimation (local) 101592474 101597330 803741 808538 NC_000014.9 velvet.9644 98.6 True fake: scaffold gap size wrong estimation (extensive) 101610260 101610930 812399 813069 NC_000014.9 velvet.9644 100.0 True fake: scaffold gap size wrong estimation (local) 101611209 101613223 813872 815800 NC_000014.9 velvet.9644 95.66 True fake: scaffold gap size wrong estimation (local) 101613404 101615814 816887 819297 NC_000014.9 velvet.9644 99.92 True CONTIG velvet.9644 819553 misassembled CONTIG velvet.9693 290 unaligned CONTIG velvet.9694 428 unaligned CONTIG velvet.9733 353 unaligned CONTIG velvet.9740 346 unaligned 81404759 81405475 1 717 NC_000014.9 velvet.9746 100.0 True CONTIG velvet.9746 717 correct 33683428 33684239 2 813 NC_000014.9 velvet.9748 100.0 True fake: scaffold gap size wrong estimation (local) 33684581 33718011 1865 36169 NC_000014.9 velvet.9748 99.96 True fake: scaffold gap size wrong estimation (local) 33719080 33720882 37952 39754 NC_000014.9 velvet.9748 99.72 True fake: scaffold gap size wrong estimation (local) 33725233 33743129 41118 59963 NC_000014.9 velvet.9748 97.79 True inversion, scaffold gap is present 33743101 33744500 61715 60319 NC_000014.9 velvet.9748 99.78 True relocation, scaffold gap is present, inconsistency = -67919865 101661246 101661923 63435 62758 NC_000014.9 velvet.9748 99.56 True fake: scaffold gap size wrong estimation (local) 101658606 101659523 67006 66089 NC_000014.9 velvet.9748 100.0 True fake: scaffold gap size wrong estimation (local) 101657182 101658049 67885 67018 NC_000014.9 velvet.9748 100.0 True local misassembly 101659583 101660885 69296 67994 NC_000014.9 velvet.9748 99.85 True relocation, scaffold gap is present, inconsistency = 37792757 63865751 63866467 69655 70371 NC_000014.9 velvet.9748 99.86 True local misassembly 63866889 63867398 70372 70881 NC_000014.9 velvet.9748 98.04 True relocation, scaffold gap is present, inconsistency = -14680868 49187273 49189216 71624 73567 NC_000014.9 velvet.9748 99.9 True relocation, scaffold gap is present, inconsistency = 52459009 101649190 101656192 82379 74532 NC_000014.9 velvet.9748 96.48 True fake: scaffold gap size wrong estimation (local) 101647361 101648634 84515 83242 NC_000014.9 velvet.9748 99.84 True relocation, scaffold gap is present, inconsistency = 67900326 33745236 33746188 85362 86314 NC_000014.9 velvet.9748 100.0 True fake: scaffold gap size wrong estimation (local) 33747364 33765309 88367 107687 NC_000014.9 velvet.9748 99.97 True relocation, scaffold gap is present, inconsistency = 15458979 49224299 49232383 107698 115782 NC_000014.9 velvet.9748 100.0 True fake: scaffold gap size wrong estimation (local) 49232656 49233486 116968 117798 NC_000014.9 velvet.9748 100.0 True fake: scaffold gap size wrong estimation (local) 49233948 49234520 118224 118796 NC_000014.9 velvet.9748 98.25 True relocation, scaffold gap is present, inconsistency = 50803265 100039506 100043610 124570 120517 NC_000014.9 velvet.9748 98.34 True fake: scaffold gap size wrong estimation (local) 100034577 100039279 130256 125487 NC_000014.9 velvet.9748 99.96 True fake: scaffold gap size wrong estimation (local) 100026233 100027678 136722 135277 NC_000014.9 velvet.9748 99.93 True fake: scaffold gap size wrong estimation (local) 100023733 100025649 140130 138214 NC_000014.9 velvet.9748 99.95 True fake: scaffold gap size wrong estimation (local) 100022560 100023177 142533 141916 NC_000014.9 velvet.9748 99.84 True relocation, scaffold gap is present, inconsistency = -24296 100043773 100046532 145573 142857 NC_000014.9 velvet.9748 98.36 True relocation, scaffold gap is present, inconsistency = 61557136 38485520 38486626 145584 146690 NC_000014.9 velvet.9748 99.91 True relocation, scaffold gap is present, inconsistency = 61560424 100047120 100050360 150000 146760 NC_000014.9 velvet.9748 99.94 True relocation, scaffold gap is present, inconsistency = 66246621 33799005 33800488 150011 151494 NC_000014.9 velvet.9748 99.93 True local misassembly 33794639 33797872 151505 154738 NC_000014.9 velvet.9748 99.94 True fake: scaffold gap size wrong estimation (local) 33802425 33806047 154749 158452 NC_000014.9 velvet.9748 99.92 True local misassembly 33800654 33801745 158463 159554 NC_000014.9 velvet.9748 100.0 True local misassembly 33801884 33802390 159555 160061 NC_000014.9 velvet.9748 98.03 True fake: scaffold gap size wrong estimation (local) 33806162 33808070 160391 162299 NC_000014.9 velvet.9748 99.69 True fake: scaffold gap size wrong estimation (local) 33808316 33811086 163202 165972 NC_000014.9 velvet.9748 99.89 True fake: not a misassembly (possible transposable element) 33797896 33798893 166534 167531 NC_000014.9 velvet.9748 99.9 True fake: not a misassembly (possible transposable element) 33811748 33819327 167542 175215 NC_000014.9 velvet.9748 99.76 True fake: scaffold gap size wrong estimation (local) 33819614 33820829 176266 177481 NC_000014.9 velvet.9748 99.92 True local misassembly 33821169 33821706 177482 178019 NC_000014.9 velvet.9748 99.63 True indel: indel (> 5bp) 33821707 33822376 178047 178716 NC_000014.9 velvet.9748 99.85 True fake: scaffold gap size wrong estimation (local) 33850736 33853636 203587 206531 NC_000014.9 velvet.9748 100.0 True fake: scaffold gap size wrong estimation (local) 33854575 33859735 208330 213490 NC_000014.9 velvet.9748 99.98 True relocation, scaffold gap is present, inconsistency = 62123369 95983872 95985932 216318 214258 NC_000014.9 velvet.9748 99.61 True relocation, scaffold gap is present, inconsistency = 46708147 49257453 49261500 230543 234578 NC_000014.9 velvet.9748 99.7 True fake: scaffold gap size wrong estimation (local) 49261586 49266145 234723 239283 NC_000014.9 velvet.9748 100.0 True fake: scaffold gap size wrong estimation (local) 49270070 49273157 239294 242418 NC_000014.9 velvet.9748 98.56 True relocation, scaffold gap is present, inconsistency = 46675060 95951057 95957400 251603 245258 NC_000014.9 velvet.9748 99.72 True inversion, scaffold gap is present 95957508 95960038 251618 254148 NC_000014.9 velvet.9748 99.84 True fake: scaffold gap size wrong estimation (local) 95961269 95966408 254274 259359 NC_000014.9 velvet.9748 98.72 True fake: scaffold gap size wrong estimation (local) 95966695 95968103 260368 261776 NC_000014.9 velvet.9748 99.93 True relocation, scaffold gap is present, inconsistency = 16478 95948007 95949041 263986 262952 NC_000014.9 velvet.9748 99.71 True relocation, scaffold gap is present, inconsistency = 11371 95960495 95961085 264069 264659 NC_000014.9 velvet.9748 100.0 True relocation, scaffold gap is present, inconsistency = 22341 95930212 95938143 272575 264670 NC_000014.9 velvet.9748 99.47 True fake: scaffold gap size wrong estimation (local) 95928241 95929924 275157 273474 NC_000014.9 velvet.9748 99.53 True relocation, scaffold gap is present, inconsistency = 11244475 84681630 84683518 277293 275405 NC_000014.9 velvet.9748 99.95 True fake: scaffold gap size wrong estimation (local) 84677603 84681372 282617 278366 NC_000014.9 velvet.9748 98.38 True fake: scaffold gap size wrong estimation (local) 84675592 84677374 285213 283431 NC_000014.9 velvet.9748 99.94 True fake: scaffold gap size wrong estimation (local) 84673282 84675246 288058 285802 NC_000014.9 velvet.9748 99.9 True fake: scaffold gap size wrong estimation (local) 84669478 84672772 292237 288939 NC_000014.9 velvet.9748 99.76 True fake: scaffold gap size wrong estimation (local) 84664220 84667687 298323 294856 NC_000014.9 velvet.9748 99.88 True fake: scaffold gap size wrong estimation (local) 84662701 84664093 300699 299307 NC_000014.9 velvet.9748 99.5 True fake: scaffold gap size wrong estimation (local) 84662043 84662700 301483 300826 NC_000014.9 velvet.9748 98.48 True relocation, scaffold gap is present, inconsistency = 11334486 95997664 95999484 301961 303782 NC_000014.9 velvet.9748 99.67 True relocation, scaffold gap is present, inconsistency = -46764688 49234807 49235595 303793 304580 NC_000014.9 velvet.9748 99.49 True fake: scaffold gap size wrong estimation (local) 49239743 49241972 305280 307515 NC_000014.9 velvet.9748 100.0 True fake: not a misassembly (possible transposable element) 54261411 54262182 310298 311069 NC_000014.9 velvet.9748 98.7 True fake: not a misassembly (possible transposable element) 49243898 49244928 312113 313148 NC_000014.9 velvet.9748 100.0 True relocation, scaffold gap is present, inconsistency = 46755975 96001306 96003559 313551 315804 NC_000014.9 velvet.9748 99.73 True relocation, scaffold gap is present, inconsistency = 11350173 84625163 84628109 341883 338828 NC_000014.9 velvet.9748 99.9 True fake: scaffold gap size wrong estimation (local) 84619015 84624930 348912 342920 NC_000014.9 velvet.9748 99.95 True relocation, scaffold gap is present, inconsistency = -21267 84635836 84636781 353421 352413 NC_000014.9 velvet.9748 97.06 True fake: scaffold gap size wrong estimation (local) 84630289 84635632 360652 354467 NC_000014.9 velvet.9748 99.85 True fake: scaffold gap size wrong estimation (local) 84628166 84630095 363675 361722 NC_000014.9 velvet.9748 97.91 True fake: scaffold gap size wrong estimation (extensive) 84605608 84606258 377729 377079 NC_000014.9 velvet.9748 99.85 True fake: scaffold gap size wrong estimation (local) 84600782 84605468 382940 378124 NC_000014.9 velvet.9748 99.81 True fake: scaffold gap size wrong estimation (local) 84598699 84600493 385869 384003 NC_000014.9 velvet.9748 97.53 True indel: indel (> 5bp) 84597921 84598651 386662 385932 NC_000014.9 velvet.9748 100.0 True fake: scaffold gap size wrong estimation (local) 84596528 84597328 388996 388196 NC_000014.9 velvet.9748 99.63 True local misassembly 84594421 84595846 390422 388997 NC_000014.9 velvet.9748 100.0 True fake: scaffold gap size wrong estimation (local) 84588256 84594302 398048 391398 NC_000014.9 velvet.9748 100.0 True fake: scaffold gap size wrong estimation (local) 84586915 84587959 399446 398404 NC_000014.9 velvet.9748 99.52 True fake: scaffold gap size wrong estimation (local) 84584403 84586745 402505 400162 NC_000014.9 velvet.9748 99.57 True fake: scaffold gap size wrong estimation (local) 84577721 84584197 409972 403499 NC_000014.9 velvet.9748 99.83 True fake: scaffold gap size wrong estimation (local) 84569408 84570158 412125 411375 NC_000014.9 velvet.9748 100.0 True fake: scaffold gap size wrong estimation (local) 84565042 84569218 417593 412931 NC_000014.9 velvet.9748 95.25 True fake: not a misassembly (possible transposable element) 84562095 84563202 417604 418711 NC_000014.9 velvet.9748 99.91 True fake: not a misassembly (possible transposable element) 84563431 84564922 420211 418722 NC_000014.9 velvet.9748 99.53 True relocation, scaffold gap is present, inconsistency = 30296662 54262487 54266531 424493 420449 NC_000014.9 velvet.9748 99.95 True relocation, scaffold gap is present, inconsistency = 18901006 35360651 35361368 425323 424606 NC_000014.9 velvet.9748 99.58 True fake: not a misassembly (possible transposable element) 41835965 41836841 425334 426210 NC_000014.9 velvet.9748 100.0 True fake: not a misassembly (possible transposable element) 35351661 35353804 428364 426221 NC_000014.9 velvet.9748 99.53 True relocation, scaffold gap is present, inconsistency = 6483055 41836870 41844173 428375 436412 NC_000014.9 velvet.9748 99.79 True fake: scaffold gap size wrong estimation (local) 41844454 41854171 437219 448750 NC_000014.9 velvet.9748 99.77 True fake: scaffold gap size wrong estimation (local) 41876600 41879775 472421 475596 NC_000014.9 velvet.9748 99.97 True fake: scaffold gap size wrong estimation (local) 41880229 41882866 476722 479394 NC_000014.9 velvet.9748 99.96 True fake: scaffold gap size wrong estimation (local) 41883381 41885168 480707 482494 NC_000014.9 velvet.9748 99.44 True fake: scaffold gap size wrong estimation (local) 41885908 41888998 483953 487086 NC_000014.9 velvet.9748 99.93 True fake: scaffold gap size wrong estimation (local) 41889147 41889948 487826 488627 NC_000014.9 velvet.9748 99.88 True fake: scaffold gap size wrong estimation (local) 41890753 41896837 489746 496534 NC_000014.9 velvet.9748 99.23 True fake: scaffold gap size wrong estimation (local) 41897140 41906340 497440 506634 NC_000014.9 velvet.9748 99.85 True fake: scaffold gap size wrong estimation (local) 41911682 41919713 512823 520836 NC_000014.9 velvet.9748 99.63 True fake: scaffold gap size wrong estimation (local) 41919831 41942671 521037 546181 NC_000014.9 velvet.9748 99.91 True fake: scaffold gap size wrong estimation (local) 41942959 41944929 547231 549161 NC_000014.9 velvet.9748 97.92 True inversion, scaffold gap is present 41944918 41956970 563649 550854 NC_000014.9 velvet.9748 99.89 True inversion, scaffold gap is present 41968744 41969727 573109 574092 NC_000014.9 velvet.9748 99.9 True fake: scaffold gap size wrong estimation (local) 41969968 41976376 575178 581697 NC_000014.9 velvet.9748 98.55 True fake: scaffold gap size wrong estimation (local) 41977141 41978253 583033 584187 NC_000014.9 velvet.9748 99.18 True fake: scaffold gap size wrong estimation (local) 41978379 41988999 585037 596705 NC_000014.9 velvet.9748 99.92 True fake: scaffold gap size wrong estimation (local) 42001622 42004167 607701 610246 NC_000014.9 velvet.9748 99.96 True fake: scaffold gap size wrong estimation (local) 42004308 42006561 611139 613392 NC_000014.9 velvet.9748 99.91 True fake: not a misassembly (possible transposable element) 94145808 94146596 614191 613403 NC_000014.9 velvet.9748 99.87 True fake: not a misassembly (possible transposable element) 42007073 42007933 614590 615450 NC_000014.9 velvet.9748 99.88 True relocation, scaffold gap is present, inconsistency = -13211 41994733 42000952 615461 621680 NC_000014.9 velvet.9748 99.86 True fake: not a misassembly (possible transposable element) 44160279 44163438 621691 624863 NC_000014.9 velvet.9748 98.56 True fake: not a misassembly (possible transposable element) 42007965 42009762 625874 627671 NC_000014.9 velvet.9748 99.83 True relocation, scaffold gap is present, inconsistency = 52132632 94142405 94143484 628761 627682 NC_000014.9 velvet.9748 99.91 True indel: indel (> 5bp) 94141723 94142395 629477 628805 NC_000014.9 velvet.9748 95.1 True relocation, scaffold gap is present, inconsistency = 39907860 54228672 54233576 634668 629764 NC_000014.9 velvet.9748 99.94 True relocation, scaffold gap is present, inconsistency = 10061172 44165349 44167489 634679 636819 NC_000014.9 velvet.9748 99.81 True local misassembly 44167490 44169139 638927 640576 NC_000014.9 velvet.9748 99.27 True fake: scaffold gap size wrong estimation (local) 44170402 44171766 643352 644661 NC_000014.9 velvet.9748 95.87 True fake: not a misassembly (possible transposable element) 41989005 41994722 644672 650389 NC_000014.9 velvet.9748 100.0 True fake: not a misassembly (possible transposable element) 44175498 44176462 650487 651450 NC_000014.9 velvet.9748 99.79 True fake: scaffold gap size wrong estimation (local) 44176728 44183067 652597 659126 NC_000014.9 velvet.9748 99.97 True relocation, scaffold gap is present, inconsistency = -11132 44171946 44173487 659137 660678 NC_000014.9 velvet.9748 99.94 True fake: scaffold gap size wrong estimation (local) 44174042 44175017 660980 661955 NC_000014.9 velvet.9748 98.98 True fake: scaffold gap size wrong estimation (extensive) 44183343 44184005 663226 663888 NC_000014.9 velvet.9748 100.0 True fake: scaffold gap size wrong estimation (local) 44184222 44185560 664122 665460 NC_000014.9 velvet.9748 100.0 True fake: scaffold gap size wrong estimation (local) 44185828 44198510 666546 680849 NC_000014.9 velvet.9748 99.75 True fake: scaffold gap size wrong estimation (local) 44202170 44207458 681963 687768 NC_000014.9 velvet.9748 99.71 True fake: scaffold gap size wrong estimation (local) 44207557 44208377 688753 689573 NC_000014.9 velvet.9748 99.88 True fake: scaffold gap size wrong estimation (local) 44211333 44212694 689879 691240 NC_000014.9 velvet.9748 99.93 True fake: scaffold gap size wrong estimation (local) 44213867 44216509 693211 695853 NC_000014.9 velvet.9748 99.89 True fake: scaffold gap size wrong estimation (local) 44216793 44217530 696710 697462 NC_000014.9 velvet.9748 97.61 True fake: scaffold gap size wrong estimation (local) 44217851 44221374 697878 701660 NC_000014.9 velvet.9748 99.22 True fake: scaffold gap size wrong estimation (local) 44221488 44224931 702494 705937 NC_000014.9 velvet.9748 99.94 True fake: scaffold gap size wrong estimation (local) 44225225 44226855 706785 708415 NC_000014.9 velvet.9748 100.0 True fake: scaffold gap size wrong estimation (local) 44227091 44232761 709273 714944 NC_000014.9 velvet.9748 99.91 True fake: scaffold gap size wrong estimation (local) 44233308 44240609 716083 723440 NC_000014.9 velvet.9748 99.1 True fake: scaffold gap size wrong estimation (local) 44240943 44244784 724350 728687 NC_000014.9 velvet.9748 99.97 True fake: scaffold gap size wrong estimation (local) 44246837 44249824 731278 734899 NC_000014.9 velvet.9748 98.36 True fake: scaffold gap size wrong estimation (local) 44250100 44266244 735956 752400 NC_000014.9 velvet.9748 99.96 True fake: scaffold gap size wrong estimation (local) 44267296 44268446 753897 755047 NC_000014.9 velvet.9748 100.0 True fake: scaffold gap size wrong estimation (local) 44268736 44274746 755267 762135 NC_000014.9 velvet.9748 99.92 True fake: scaffold gap size wrong estimation (local) 44275028 44277238 763200 765379 NC_000014.9 velvet.9748 98.59 True fake: scaffold gap size wrong estimation (local) 44277490 44278519 766524 767553 NC_000014.9 velvet.9748 99.71 True fake: scaffold gap size wrong estimation (local) 44278787 44280216 767782 769211 NC_000014.9 velvet.9748 99.86 True fake: scaffold gap size wrong estimation (local) 44280337 44284612 770062 774337 NC_000014.9 velvet.9748 99.91 True fake: scaffold gap size wrong estimation (local) 44285193 44289432 775576 779876 NC_000014.9 velvet.9748 99.95 True fake: scaffold gap size wrong estimation (local) 44289577 44298061 780765 789450 NC_000014.9 velvet.9748 99.95 True fake: scaffold gap size wrong estimation (local) 44298185 44304996 790230 796893 NC_000014.9 velvet.9748 97.77 True fake: scaffold gap size wrong estimation (local) 44305275 44310952 797915 803615 NC_000014.9 velvet.9748 99.7 True fake: scaffold gap size wrong estimation (local) 44315089 44316499 806690 808100 NC_000014.9 velvet.9748 99.93 True fake: scaffold gap size wrong estimation (local) 44316593 44319187 808997 811591 NC_000014.9 velvet.9748 99.88 True fake: scaffold gap size wrong estimation (local) 44319459 44321492 812669 814747 NC_000014.9 velvet.9748 99.8 True fake: scaffold gap size wrong estimation (local) 44325153 44331430 814758 821115 NC_000014.9 velvet.9748 99.94 True fake: scaffold gap size wrong estimation (local) 44331547 44334645 822022 825119 NC_000014.9 velvet.9748 99.9 True fake: scaffold gap size wrong estimation (local) 44334829 44347847 825995 839783 NC_000014.9 velvet.9748 99.91 True fake: scaffold gap size wrong estimation (local) 44347962 44348882 840435 841357 NC_000014.9 velvet.9748 99.46 True fake: scaffold gap size wrong estimation (local) 44349015 44357073 842085 850143 NC_000014.9 velvet.9748 99.96 True relocation, scaffold gap is present, inconsistency = 9554 44366638 44373875 857391 850154 NC_000014.9 velvet.9748 99.96 True fake: scaffold gap size wrong estimation (local) 44357050 44366351 867706 858452 NC_000014.9 velvet.9748 99.4 True relocation, scaffold gap is present, inconsistency = 7566 44373928 44375487 867717 869275 NC_000014.9 velvet.9748 99.68 True fake: scaffold gap size wrong estimation (local) 44376572 44377366 871049 871843 NC_000014.9 velvet.9748 99.87 True fake: scaffold gap size wrong estimation (local) 44378012 44381237 872444 876615 NC_000014.9 velvet.9748 98.71 True fake: scaffold gap size wrong estimation (local) 44381663 44384584 877431 880352 NC_000014.9 velvet.9748 99.9 True fake: scaffold gap size wrong estimation (local) 44385959 44390293 882445 886779 NC_000014.9 velvet.9748 99.79 True fake: scaffold gap size wrong estimation (local) 44390579 44394051 887916 891388 NC_000014.9 velvet.9748 100.0 True relocation, scaffold gap is present, inconsistency = 65058 44459120 44460870 891399 893148 NC_000014.9 velvet.9748 99.83 True inversion, scaffold gap is present 44464349 44465689 897791 896451 NC_000014.9 velvet.9748 99.85 True fake: not a misassembly (possible transposable element) 44394071 44397025 900357 903311 NC_000014.9 velvet.9748 100.0 True fake: not a misassembly (possible transposable element) 44429776 44431663 927432 925536 NC_000014.9 velvet.9748 100.0 True inversion, scaffold gap is present 44424335 44425424 927443 928532 NC_000014.9 velvet.9748 99.91 True local misassembly 44423471 44424099 931727 932355 NC_000014.9 velvet.9748 99.84 True fake: scaffold gap size wrong estimation (local) 44425889 44428907 934805 937823 NC_000014.9 velvet.9748 99.97 True relocation, scaffold gap is present, inconsistency = 32719 44462065 44463102 939299 938262 NC_000014.9 velvet.9748 100.0 True inversion, scaffold gap is present 44463607 44464378 940659 941430 NC_000014.9 velvet.9748 99.48 True relocation, scaffold gap is present, inconsistency = 61817788 106293235 106293821 952499 953085 NC_000014.9 velvet.9748 99.83 True fake: scaffold gap size wrong estimation (local) 106295723 106296258 956077 956612 NC_000014.9 velvet.9748 99.81 True relocation, scaffold gap is present, inconsistency = 61855600 44437901 44440112 958819 956623 NC_000014.9 velvet.9748 99.32 True fake: scaffold gap size wrong estimation (local) 44431681 44437684 965847 959844 NC_000014.9 velvet.9748 99.98 True relocation, scaffold gap is present, inconsistency = 61863765 106301747 106306001 966145 970990 NC_000014.9 velvet.9748 99.67 True fake: scaffold gap size wrong estimation (local) 106306220 106307474 971991 973245 NC_000014.9 velvet.9748 99.92 True local misassembly 106307585 106308212 973246 973873 NC_000014.9 velvet.9748 97.61 True fake: scaffold gap size wrong estimation (local) 106309161 106312462 976978 980279 NC_000014.9 velvet.9748 99.85 True fake: scaffold gap size wrong estimation (local) 106312935 106318211 981409 987399 NC_000014.9 velvet.9748 99.94 True relocation, scaffold gap is present, inconsistency = -12499 106323284 106324052 1005740 1004971 NC_000014.9 velvet.9748 99.61 True fake: scaffold gap size wrong estimation (local) 106318407 106322474 1011576 1007432 NC_000014.9 velvet.9748 99.98 True relocation, scaffold gap is present, inconsistency = 75065 106213275 106213830 1041088 1041643 NC_000014.9 velvet.9748 100.0 True relocation, scaffold gap is present, inconsistency = 61746080 44458340 44459088 1050498 1049750 NC_000014.9 velvet.9748 99.87 True inversion, scaffold gap is present 44465738 44467811 1050509 1052574 NC_000014.9 velvet.9748 99.61 True fake: scaffold gap size wrong estimation (local) 44468107 44471229 1053516 1057741 NC_000014.9 velvet.9748 99.97 True relocation, scaffold gap is present, inconsistency = 9144 44451988 44458059 1065121 1058645 NC_000014.9 velvet.9748 99.9 True fake: scaffold gap size wrong estimation (local) 44450029 44451735 1067830 1066158 NC_000014.9 velvet.9748 97.83 True fake: scaffold gap size wrong estimation (local) 44447953 44449796 1070362 1068514 NC_000014.9 velvet.9748 99.84 True fake: scaffold gap size wrong estimation (local) 44445684 44447736 1073139 1071087 NC_000014.9 velvet.9748 100.0 True fake: scaffold gap size wrong estimation (local) 44444364 44445424 1075022 1073962 NC_000014.9 velvet.9748 99.91 True relocation, scaffold gap is present, inconsistency = 45328 44498830 44500810 1083100 1085167 NC_000014.9 velvet.9748 95.55 True fake: scaffold gap size wrong estimation (local) 44501098 44503696 1086153 1088751 NC_000014.9 velvet.9748 99.77 True relocation, scaffold gap is present, inconsistency = -106389 44397318 44398819 1088762 1090261 NC_000014.9 velvet.9748 99.8 True fake: scaffold gap size wrong estimation (local) 44398994 44408734 1090947 1100628 NC_000014.9 velvet.9748 99.34 True fake: scaffold gap size wrong estimation (local) 44409013 44415032 1101712 1107739 NC_000014.9 velvet.9748 99.48 True fake: scaffold gap size wrong estimation (local) 44415380 44419262 1108944 1112830 NC_000014.9 velvet.9748 99.97 True fake: scaffold gap size wrong estimation (local) 44419587 44422123 1114044 1116670 NC_000014.9 velvet.9748 99.72 True relocation, scaffold gap is present, inconsistency = 61853620 106275882 106280157 1121084 1116809 NC_000014.9 velvet.9748 99.77 True fake: scaffold gap size wrong estimation (local) 106274642 106275258 1123261 1122645 NC_000014.9 velvet.9748 98.38 True local misassembly 106273643 106274207 1123826 1123262 NC_000014.9 velvet.9748 99.47 True local misassembly 106275290 106275879 1124729 1124113 NC_000014.9 velvet.9748 95.46 True fake: scaffold gap size wrong estimation (local) 106271540 106273608 1129251 1127183 NC_000014.9 velvet.9748 99.71 True fake: scaffold gap size wrong estimation (local) 106270224 106270780 1131203 1130647 NC_000014.9 velvet.9748 99.82 True fake: scaffold gap size wrong estimation (local) 106269193 106269840 1132279 1131632 NC_000014.9 velvet.9748 98.46 True fake: scaffold gap size wrong estimation (local) 106267145 106268466 1134976 1133663 NC_000014.9 velvet.9748 99.24 True fake: scaffold gap size wrong estimation (local) 106264469 106266888 1138256 1135787 NC_000014.9 velvet.9748 99.87 True fake: scaffold gap size wrong estimation (local) 106263175 106264318 1139987 1138844 NC_000014.9 velvet.9748 99.91 True fake: scaffold gap size wrong estimation (local) 106261595 106262878 1142192 1140909 NC_000014.9 velvet.9748 99.84 True fake: scaffold gap size wrong estimation (local) 106260682 106261513 1143313 1142482 NC_000014.9 velvet.9748 100.0 True fake: scaffold gap size wrong estimation (local) 106259261 106260019 1145236 1144478 NC_000014.9 velvet.9748 99.87 True relocation, scaffold gap is present, inconsistency = 127884 106393492 106396984 1150825 1154317 NC_000014.9 velvet.9748 99.94 True fake: scaffold gap size wrong estimation (local) 106397158 106398048 1155326 1156216 NC_000014.9 velvet.9748 99.21 True relocation, scaffold gap is present, inconsistency = 70875 106468934 106469788 1157081 1156227 NC_000014.9 velvet.9748 99.88 True local misassembly 106469793 106470473 1157772 1157092 NC_000014.9 velvet.9748 99.85 True fake: scaffold gap size wrong estimation (local) 106463569 106468887 1165244 1159216 NC_000014.9 velvet.9748 99.77 True inversion, scaffold gap is present 106470870 106472504 1166270 1167904 NC_000014.9 velvet.9748 99.94 True fake: scaffold gap size wrong estimation (local) 106473448 106473974 1169744 1170270 NC_000014.9 velvet.9748 100.0 True local misassembly 106474097 106475315 1170271 1171489 NC_000014.9 velvet.9748 98.93 True relocation, scaffold gap is present, inconsistency = 188020 106667293 106671068 1175447 1179222 NC_000014.9 velvet.9748 99.89 True local misassembly 106671180 106671860 1179473 1180153 NC_000014.9 velvet.9748 100.0 True relocation, scaffold gap is present, inconsistency = -189714 106483887 106486095 1181894 1184131 NC_000014.9 velvet.9748 95.48 True fake: scaffold gap size wrong estimation (local) 106486515 106494936 1185344 1193860 NC_000014.9 velvet.9748 99.8 True fake: not a misassembly (possible transposable element) 106688342 106693012 1193871 1198588 NC_000014.9 velvet.9748 99.59 True fake: not a misassembly (possible transposable element) 106495233 106496051 1198599 1199417 NC_000014.9 velvet.9748 100.0 True fake: scaffold gap size wrong estimation (local) 106496212 106497035 1199500 1200323 NC_000014.9 velvet.9748 99.88 True relocation, scaffold gap is present, inconsistency = 196246 106693292 106695578 1200334 1202572 NC_000014.9 velvet.9748 97.51 True relocation, scaffold gap is present, inconsistency = -29196 106666393 106667122 1202583 1203312 NC_000014.9 velvet.9748 99.86 True relocation, scaffold gap is present, inconsistency = 8489 106655304 106657893 1205869 1203323 NC_000014.9 velvet.9748 97.91 True fake: scaffold gap size wrong estimation (local) 106654620 106655154 1207629 1207095 NC_000014.9 velvet.9748 100.0 True relocation, scaffold gap is present, inconsistency = 31394 106711869 106712534 1232950 1233615 NC_000014.9 velvet.9748 100.0 True fake: scaffold gap size wrong estimation (local) 106714086 106715224 1235508 1236646 NC_000014.9 velvet.9748 99.21 True fake: scaffold gap size wrong estimation (local) 106715670 106716188 1237118 1237636 NC_000014.9 velvet.9748 99.04 True relocation, scaffold gap is present, inconsistency = -182799 106533400 106537514 1237647 1241725 NC_000014.9 velvet.9748 98.68 True relocation, scaffold gap is present, inconsistency = 172431 106711020 106711547 1243327 1242800 NC_000014.9 velvet.9748 99.81 True fake: scaffold gap size wrong estimation (local) 106708611 106710449 1246614 1244776 NC_000014.9 velvet.9748 99.89 True fake: not a misassembly (possible transposable element) 106619647 106626375 1258231 1251502 NC_000014.9 velvet.9748 99.84 True fake: not a misassembly (possible transposable element) 106678034 106683665 1280388 1274186 NC_000014.9 velvet.9748 95.68 True relocation, scaffold gap is present, inconsistency = -46281 106686362 106688269 1318341 1316434 NC_000014.9 velvet.9748 99.9 True fake: scaffold gap size wrong estimation (local) 106683697 106686192 1321752 1319257 NC_000014.9 velvet.9748 99.92 True fake: scaffold gap size wrong estimation (local) 106648079 106648639 1352865 1352305 NC_000014.9 velvet.9748 100.0 True relocation, scaffold gap is present, inconsistency = -9733 106651725 106654007 1358952 1356670 NC_000014.9 velvet.9748 99.91 True fake: scaffold gap size wrong estimation (local) 106649250 106649994 1362221 1361477 NC_000014.9 velvet.9748 100.0 True fake: scaffold gap size wrong estimation (local) 106644111 106644781 1370872 1370202 NC_000014.9 velvet.9748 99.4 True fake: scaffold gap size wrong estimation (local) 106618154 106619640 1390754 1389259 NC_000014.9 velvet.9748 100.0 True relocation, scaffold gap is present, inconsistency = -33114 106650551 106651115 1391471 1390907 NC_000014.9 velvet.9748 99.82 True relocation, scaffold gap is present, inconsistency = 475250 106165969 106166722 1400803 1400050 NC_000014.9 velvet.9748 99.73 True fake: scaffold gap size wrong estimation (local) 106162945 106164795 1404726 1402876 NC_000014.9 velvet.9748 99.84 True fake: scaffold gap size wrong estimation (local) 106156808 106158774 1412269 1410332 NC_000014.9 velvet.9748 97.46 True fake: scaffold gap size wrong estimation (local) 106154176 106154694 1415523 1415005 NC_000014.9 velvet.9748 99.81 True CONTIG velvet.9748 1415523 misassembled CONTIG velvet.9751 206 unaligned CONTIG velvet.9762 236 unaligned CONTIG velvet.9772 206 unaligned CONTIG velvet.9788 301 unaligned CONTIG velvet.9789 378 unaligned 74277657 74278980 1 1324 NC_000014.9 velvet.9798 99.92 True CONTIG velvet.9798 1513 correct CONTIG velvet.9805 225 unaligned CONTIG velvet.9806 413 unaligned CONTIG velvet.9842 215 unaligned CONTIG velvet.9844 291 unaligned 19323246 19324273 1029 2 NC_000014.9 velvet.9877 100.0 True CONTIG velvet.9877 1029 correct CONTIG velvet.9888 287 unaligned CONTIG velvet.9895 3827 unaligned 101982610 101983681 1 1072 NC_000014.9 velvet.9898 100.0 True relocation, scaffold gap is present, inconsistency = -7878 101976567 101977986 1836 3264 NC_000014.9 velvet.9898 100.0 True CONTIG velvet.9898 3264 misassembled CONTIG velvet.9922 267 unaligned CONTIG velvet.9930 257 unaligned CONTIG velvet.9934 383 unaligned CONTIG velvet.9943 266 unaligned 18313628 18314156 1 529 NC_000014.9 velvet.9949 99.81 True CONTIG velvet.9949 529 correct CONTIG velvet.9970 453 unaligned CONTIG velvet.9978 218 unaligned CONTIG velvet.9981 211 unaligned 74688297 74688850 1 554 NC_000014.9 velvet.9994 100.0 True CONTIG velvet.9994 554 correct CONTIG velvet.10001 218 unaligned CONTIG velvet.10005 204 unaligned 23893093 23893785 1 693 NC_000014.9 velvet.10014 100.0 True CONTIG velvet.10014 693 correct CONTIG velvet.10019 11497 unaligned CONTIG velvet.10024 320 unaligned CONTIG velvet.10035 309 unaligned CONTIG velvet.10048 270 unaligned CONTIG velvet.10049 247 unaligned 53220131 53220708 1 578 NC_000014.9 velvet.10051 99.83 True CONTIG velvet.10051 578 correct CONTIG velvet.10057 240 unaligned 25104878 25105379 652 151 NC_000014.9 velvet.10058 99.2 True CONTIG velvet.10058 652 correct CONTIG velvet.10064 275 unaligned CONTIG velvet.10071 202 unaligned 18939631 18940145 515 1 NC_000014.9 velvet.10078 100.0 True CONTIG velvet.10078 515 correct CONTIG velvet.10079 263 unaligned CONTIG velvet.10080 333 unaligned CONTIG velvet.10090 465 unaligned CONTIG velvet.10104 7139 unaligned CONTIG velvet.10119 231 unaligned CONTIG velvet.10128 201 unaligned CONTIG velvet.10140 537 unaligned CONTIG velvet.10145 268 unaligned 18310313 18310928 1 616 NC_000014.9 velvet.10146 100.0 True CONTIG velvet.10146 616 correct CONTIG velvet.10182 245 unaligned CONTIG velvet.10191 283 unaligned CONTIG velvet.10193 219 unaligned CONTIG velvet.10215 337 unaligned 19367699 19368852 1 1154 NC_000014.9 velvet.10222 99.83 True CONTIG velvet.10222 1154 correct CONTIG velvet.10247 244 unaligned 53276269 53277385 1 1117 NC_000014.9 velvet.10267 99.91 True CONTIG velvet.10267 1117 correct CONTIG velvet.10301 223 unaligned CONTIG velvet.10398 358 unaligned 19049950 19050723 801 28 NC_000014.9 velvet.10402 99.74 True CONTIG velvet.10402 801 correct 18280315 18282954 2640 1 NC_000014.9 velvet.10424 99.85 True CONTIG velvet.10424 2640 correct CONTIG velvet.10430 330 unaligned 64270792 64271373 1 582 NC_000014.9 velvet.10444 99.66 True CONTIG velvet.10444 582 correct 19300079 19303373 1 3295 NC_000014.9 velvet.10446 99.76 True CONTIG velvet.10446 3295 correct 20526476 20527373 179 1076 NC_000014.9 velvet.10447 99.89 True CONTIG velvet.10447 1076 correct 19026051 19026662 612 1 NC_000014.9 velvet.10452 99.51 True CONTIG velvet.10452 612 correct CONTIG velvet.10457 305 unaligned CONTIG velvet.10465 519 unaligned 76444295 76444941 1 647 NC_000014.9 velvet.10466 100.0 True CONTIG velvet.10466 647 correct CONTIG velvet.10476 423 unaligned CONTIG velvet.10480 274 unaligned CONTIG velvet.10483 261 unaligned CONTIG velvet.10522 208 unaligned CONTIG velvet.10524 232 unaligned 89054303 89055600 1298 1 NC_000014.9 velvet.10527 99.92 True fake: scaffold gap size wrong estimation (local) 89052545 89053582 4029 2992 NC_000014.9 velvet.10527 98.84 True fake: scaffold gap size wrong estimation (local) 89050461 89051705 5793 4549 NC_000014.9 velvet.10527 100.0 True fake: scaffold gap size wrong estimation (local) 89048320 89050054 8682 6949 NC_000014.9 velvet.10527 99.88 True fake: scaffold gap size wrong estimation (local) 89047296 89048098 9906 9104 NC_000014.9 velvet.10527 100.0 True fake: scaffold gap size wrong estimation (local) 89018914 89020099 37762 36577 NC_000014.9 velvet.10527 100.0 True CONTIG velvet.10527 37762 correct 70544146 70545604 2591 1133 NC_000014.9 velvet.10529 99.86 True relocation, scaffold gap is present, inconsistency = 21809595 48719758 48727442 18254 9700 NC_000014.9 velvet.10529 99.04 True fake: scaffold gap size wrong estimation (local) 48715050 48719577 23668 18463 NC_000014.9 velvet.10529 98.26 True fake: scaffold gap size wrong estimation (local) 48711482 48714916 28066 24394 NC_000014.9 velvet.10529 100.0 True fake: scaffold gap size wrong estimation (local) 48709073 48709814 31241 30500 NC_000014.9 velvet.10529 99.87 True fake: scaffold gap size wrong estimation (local) 48702798 48708844 39086 32255 NC_000014.9 velvet.10529 99.97 True fake: scaffold gap size wrong estimation (local) 48693756 48697432 45328 41651 NC_000014.9 velvet.10529 99.81 True fake: scaffold gap size wrong estimation (local) 48691691 48693292 49141 47540 NC_000014.9 velvet.10529 99.94 True fake: scaffold gap size wrong estimation (local) 48689356 48691435 52095 49430 NC_000014.9 velvet.10529 98.98 True fake: scaffold gap size wrong estimation (local) 48686283 48689027 55701 52957 NC_000014.9 velvet.10529 99.93 True fake: scaffold gap size wrong estimation (local) 48681708 48686011 61789 56708 NC_000014.9 velvet.10529 97.65 True fake: scaffold gap size wrong estimation (local) 48674425 48681391 70499 62565 NC_000014.9 velvet.10529 99.7 True fake: scaffold gap size wrong estimation (local) 48666554 48674179 79138 71505 NC_000014.9 velvet.10529 99.88 True fake: scaffold gap size wrong estimation (local) 48660664 48666319 85733 80079 NC_000014.9 velvet.10529 99.89 True fake: scaffold gap size wrong estimation (local) 48638461 48639778 101915 100639 NC_000014.9 velvet.10529 96.3 True fake: scaffold gap size wrong estimation (local) 48636222 48637001 104294 103515 NC_000014.9 velvet.10529 99.87 True fake: scaffold gap size wrong estimation (local) 48631541 48636156 110195 105547 NC_000014.9 velvet.10529 99.98 True fake: scaffold gap size wrong estimation (local) 48628454 48630584 114242 112112 NC_000014.9 velvet.10529 99.86 True fake: scaffold gap size wrong estimation (local) 48603771 48607039 138342 135043 NC_000014.9 velvet.10529 98.31 True fake: scaffold gap size wrong estimation (local) 48599421 48602222 143420 140619 NC_000014.9 velvet.10529 99.96 True fake: scaffold gap size wrong estimation (local) 48597119 48598685 146501 144935 NC_000014.9 velvet.10529 99.94 True fake: scaffold gap size wrong estimation (local) 48593824 48596044 150503 148283 NC_000014.9 velvet.10529 99.91 True fake: scaffold gap size wrong estimation (local) 48557305 48558924 184923 183304 NC_000014.9 velvet.10529 99.32 True local misassembly 48556504 48557164 185584 184924 NC_000014.9 velvet.10529 100.0 True relocation, scaffold gap is present, inconsistency = 36600200 85157946 85159200 186166 187420 NC_000014.9 velvet.10529 99.2 True indel: indel (<= 5bp) 85159205 85160610 187421 188826 NC_000014.9 velvet.10529 98.51 True local misassembly 85160611 85161512 190119 191020 NC_000014.9 velvet.10529 98.89 True inversion, scaffold gap is present 85164249 85172025 201239 192058 NC_000014.9 velvet.10529 99.7 True fake: scaffold gap size wrong estimation (local) 85162547 85163142 203924 203329 NC_000014.9 velvet.10529 97.82 True relocation, scaffold gap is present, inconsistency = 36593936 48562561 48563920 208615 209953 NC_000014.9 velvet.10529 98.37 True fake: scaffold gap size wrong estimation (local) 48564844 48566618 211614 213452 NC_000014.9 velvet.10529 97.09 True inversion, scaffold gap is present 48566593 48570390 218217 214408 NC_000014.9 velvet.10529 99.55 True relocation, scaffold gap is present, inconsistency = -36574091 85137881 85138447 221020 220454 NC_000014.9 velvet.10529 100.0 True fake: scaffold gap size wrong estimation (local) 85134878 85137590 224899 221831 NC_000014.9 velvet.10529 99.93 True fake: scaffold gap size wrong estimation (local) 85133360 85134612 226776 225526 NC_000014.9 velvet.10529 99.76 True fake: scaffold gap size wrong estimation (local) 85125227 85133222 235471 227476 NC_000014.9 velvet.10529 99.71 True fake: scaffold gap size wrong estimation (local) 85123481 85124905 237316 235892 NC_000014.9 velvet.10529 100.0 True indel: indel (<= 5bp) 85122726 85123479 238070 237317 NC_000014.9 velvet.10529 97.61 True fake: scaffold gap size wrong estimation (local) 85119009 85122725 241895 238179 NC_000014.9 velvet.10529 99.68 True fake: scaffold gap size wrong estimation (extensive) 85113843 85118580 255274 250537 NC_000014.9 velvet.10529 99.92 True fake: scaffold gap size wrong estimation (local) 85112524 85113466 257280 256337 NC_000014.9 velvet.10529 99.58 True fake: not a misassembly (possible transposable element) 49337725 49342385 261967 257306 NC_000014.9 velvet.10529 99.72 True fake: not a misassembly (possible transposable element) 85107900 85110548 264667 261978 NC_000014.9 velvet.10529 98.4 True fake: scaffold gap size wrong estimation (local) 85104114 85107732 270191 265802 NC_000014.9 velvet.10529 99.97 True fake: scaffold gap size wrong estimation (local) 85102818 85103830 271680 270668 NC_000014.9 velvet.10529 99.9 True relocation, scaffold gap is present, inconsistency = 13383 85078549 85079094 282566 282021 NC_000014.9 velvet.10529 98.17 True fake: scaffold gap size wrong estimation (local) 85072706 85076849 289139 284996 NC_000014.9 velvet.10529 100.0 True relocation, scaffold gap is present, inconsistency = 35763053 49308131 49309642 290661 289150 NC_000014.9 velvet.10529 99.87 True relocation, scaffold gap is present, inconsistency = 8601 49296740 49299519 290672 293453 NC_000014.9 velvet.10529 99.82 True relocation, scaffold gap is present, inconsistency = 35695493 84995257 84995798 293698 294239 NC_000014.9 velvet.10529 99.82 True fake: scaffold gap size wrong estimation (local) 84995822 84998059 295427 297664 NC_000014.9 velvet.10529 99.87 True fake: scaffold gap size wrong estimation (local) 85024424 85026559 323382 325517 NC_000014.9 velvet.10529 99.81 True inversion, scaffold gap is present 85031462 85032010 326076 325528 NC_000014.9 velvet.10529 98.0 True local misassembly 85029799 85031345 327623 326077 NC_000014.9 velvet.10529 99.87 True fake: scaffold gap size wrong estimation (local) 85026532 85028874 331655 329313 NC_000014.9 velvet.10529 100.0 True relocation, scaffold gap is present, inconsistency = -16589 85032028 85033738 342736 341038 NC_000014.9 velvet.10529 99.24 True fake: scaffold gap size wrong estimation (local) 85028903 85029776 346294 345438 NC_000014.9 velvet.10529 98.03 True inversion, scaffold gap is present 85034717 85037946 347773 350957 NC_000014.9 velvet.10529 98.48 True fake: not a misassembly (possible transposable element) 49274098 49275542 355245 356709 NC_000014.9 velvet.10529 98.16 True fake: not a misassembly (possible transposable element) 85054942 85071961 365485 382758 NC_000014.9 velvet.10529 99.52 True relocation, scaffold gap is present, inconsistency = -35766979 49304993 49307901 382769 385744 NC_000014.9 velvet.10529 97.43 True fake: scaffold gap size wrong estimation (local) 49309704 49310842 388286 389424 NC_000014.9 velvet.10529 99.65 True relocation, scaffold gap is present, inconsistency = -9737 49301116 49304961 389435 393280 NC_000014.9 velvet.10529 99.95 True relocation, scaffold gap is present, inconsistency = 35774174 85079146 85083327 393291 397472 NC_000014.9 velvet.10529 99.76 True fake: scaffold gap size wrong estimation (local) 85083569 85084762 398422 399615 NC_000014.9 velvet.10529 99.92 True relocation, scaffold gap is present, inconsistency = -35773911 49310895 49311478 399659 400242 NC_000014.9 velvet.10529 99.83 True fake: scaffold gap size wrong estimation (extensive) 49319494 49326572 400507 407656 NC_000014.9 velvet.10529 99.96 True fake: scaffold gap size wrong estimation (local) 49353215 49353807 435159 435750 NC_000014.9 velvet.10529 97.3 True fake: scaffold gap size wrong estimation (local) 49362727 49365791 440964 444028 NC_000014.9 velvet.10529 99.87 True fake: scaffold gap size wrong estimation (local) 49366078 49366957 445167 446046 NC_000014.9 velvet.10529 100.0 True fake: scaffold gap size wrong estimation (local) 49397851 49398584 475559 476269 NC_000014.9 velvet.10529 96.55 True CONTIG velvet.10529 476269 misassembled 99419768 99420943 1 1176 NC_000014.9 velvet.10532 99.91 True CONTIG velvet.10532 1176 correct CONTIG velvet.10538 297 unaligned 55258884 55259889 1006 1 NC_000014.9 velvet.10582 99.9 True CONTIG velvet.10582 1078 correct CONTIG velvet.10585 404 unaligned 78713804 78714384 1 581 NC_000014.9 velvet.10603 100.0 True CONTIG velvet.10603 581 correct CONTIG velvet.10622 243 unaligned CONTIG velvet.10632 324 unaligned CONTIG velvet.10639 262 unaligned CONTIG velvet.10659 224 unaligned CONTIG velvet.10666 354 unaligned CONTIG velvet.10683 450 unaligned 70731559 70739135 8775 1199 NC_000014.9 velvet.10698 99.91 True relocation, scaffold gap is present, inconsistency = 18705069 52023461 52026479 11804 8786 NC_000014.9 velvet.10698 99.74 True relocation, scaffold gap is present, inconsistency = 18655430 70683026 70687794 12921 17689 NC_000014.9 velvet.10698 100.0 True fake: scaffold gap size wrong estimation (local) 70688847 70689800 19594 20594 NC_000014.9 velvet.10698 100.0 True fake: scaffold gap size wrong estimation (local) 70718348 70720344 47691 49687 NC_000014.9 velvet.10698 99.85 True fake: not a misassembly (possible transposable element) 51988098 51992946 56528 51680 NC_000014.9 velvet.10698 99.94 True fake: not a misassembly (possible transposable element) 70721230 70722210 56539 57519 NC_000014.9 velvet.10698 100.0 True fake: scaffold gap size wrong estimation (local) 70747344 70747876 84993 85525 NC_000014.9 velvet.10698 99.81 True fake: scaffold gap size wrong estimation (local) 70754772 70757244 86883 89355 NC_000014.9 velvet.10698 99.96 True relocation, scaffold gap is present, inconsistency = -17722 70739533 70741124 89366 90957 NC_000014.9 velvet.10698 100.0 True fake: scaffold gap size wrong estimation (local) 70741956 70742931 92363 93338 NC_000014.9 velvet.10698 99.9 True fake: scaffold gap size wrong estimation (local) 70744330 70745490 95461 96621 NC_000014.9 velvet.10698 100.0 True fake: scaffold gap size wrong estimation (local) 70745769 70746837 97557 98625 NC_000014.9 velvet.10698 98.97 True relocation, scaffold gap is present, inconsistency = 22584 70781543 70784030 110747 113234 NC_000014.9 velvet.10698 100.0 True fake: scaffold gap size wrong estimation (local) 70784294 70787252 114273 117269 NC_000014.9 velvet.10698 98.56 True fake: scaffold gap size wrong estimation (local) 70787451 70793435 118233 124263 NC_000014.9 velvet.10698 99.88 True fake: scaffold gap size wrong estimation (local) 70793555 70794692 125104 126241 NC_000014.9 velvet.10698 99.91 True CONTIG velvet.10698 126241 misassembled CONTIG velvet.10705 3626 unaligned CONTIG velvet.10725 312 unaligned 18663012 18663988 1 977 NC_000014.9 velvet.10732 99.69 True CONTIG velvet.10732 977 correct CONTIG velvet.10736 267 unaligned CONTIG velvet.10743 260 unaligned CONTIG velvet.10744 214 unaligned CONTIG velvet.10748 477 unaligned CONTIG velvet.10761 320 unaligned 34085309 34088327 947 3954 NC_000014.9 velvet.10789 99.64 True relocation, scaffold gap is present, inconsistency = -7454 34080884 34085066 3965 8147 NC_000014.9 velvet.10789 100.0 True fake: scaffold gap size wrong estimation (local) 34088574 34092641 8158 12225 NC_000014.9 velvet.10789 100.0 True CONTIG velvet.10789 12225 misassembled CONTIG velvet.10795 226 unaligned CONTIG velvet.10807 220 unaligned CONTIG velvet.10815 247 unaligned CONTIG velvet.10828 3860 unaligned 82347037 82347579 543 1 NC_000014.9 velvet.10848 100.0 True CONTIG velvet.10848 543 correct CONTIG velvet.10867 243 unaligned CONTIG velvet.10883 352 unaligned CONTIG velvet.10905 212 unaligned CONTIG velvet.10908 429 unaligned CONTIG velvet.10918 437 unaligned 85312864 85317237 1 4374 NC_000014.9 velvet.10922 99.91 True relocation, scaffold gap is present, inconsistency = 41152197 44156546 44158130 8495 6911 NC_000014.9 velvet.10922 100.0 True fake: scaffold gap size wrong estimation (local) 44150332 44156255 15826 9641 NC_000014.9 velvet.10922 99.93 True fake: scaffold gap size wrong estimation (local) 44128389 44150058 39480 16895 NC_000014.9 velvet.10922 99.99 True fake: scaffold gap size wrong estimation (local) 44119095 44126861 49495 41605 NC_000014.9 velvet.10922 99.85 True relocation, scaffold gap is present, inconsistency = 41211132 85338004 85340677 49506 52147 NC_000014.9 velvet.10922 98.77 True fake: scaffold gap size wrong estimation (local) 85340947 85341711 52984 53748 NC_000014.9 velvet.10922 99.74 True fake: not a misassembly (possible transposable element) 66495059 66498064 55815 58820 NC_000014.9 velvet.10922 100.0 True fake: not a misassembly (possible transposable element) 85342424 85346387 58831 62873 NC_000014.9 velvet.10922 99.97 True fake: scaffold gap size wrong estimation (local) 85353336 85366945 62884 76499 NC_000014.9 velvet.10922 99.91 True relocation, scaffold gap is present, inconsistency = -41925139 43441817 43442714 76510 77397 NC_000014.9 velvet.10922 98.87 True relocation, scaffold gap is present, inconsistency = 6161600 49605133 49606031 78216 79114 NC_000014.9 velvet.10922 99.33 True fake: scaffold gap size wrong estimation (local) 49607091 49608923 80890 82764 NC_000014.9 velvet.10922 100.0 True fake: scaffold gap size wrong estimation (local) 49615891 49616511 82775 83395 NC_000014.9 velvet.10922 100.0 True fake: scaffold gap size wrong estimation (local) 49617296 49619393 84952 87073 NC_000014.9 velvet.10922 99.13 True fake: scaffold gap size wrong estimation (local) 49619662 49621019 88254 89611 NC_000014.9 velvet.10922 100.0 True fake: scaffold gap size wrong estimation (extensive) 49630100 49630690 90082 90668 NC_000014.9 velvet.10922 99.15 True relocation, scaffold gap is present, inconsistency = 35718185 85348886 85352041 90679 93834 NC_000014.9 velvet.10922 99.94 True relocation, scaffold gap is present, inconsistency = -35732813 49627886 49628499 102492 103105 NC_000014.9 velvet.10922 100.0 True fake: scaffold gap size wrong estimation (local) 49633226 49635383 109140 111297 NC_000014.9 velvet.10922 100.0 True fake: scaffold gap size wrong estimation (local) 49636344 49637306 112979 113941 NC_000014.9 velvet.10922 100.0 True fake: scaffold gap size wrong estimation (local) 49637571 49638104 114458 114991 NC_000014.9 velvet.10922 100.0 True fake: scaffold gap size wrong estimation (local) 49638410 49640397 115852 117815 NC_000014.9 velvet.10922 98.73 True fake: scaffold gap size wrong estimation (local) 49640669 49642783 118828 120942 NC_000014.9 velvet.10922 100.0 True fake: scaffold gap size wrong estimation (local) 49668489 49670060 143227 144833 NC_000014.9 velvet.10922 97.76 True fake: scaffold gap size wrong estimation (local) 49670356 49671398 145844 146886 NC_000014.9 velvet.10922 100.0 True fake: scaffold gap size wrong estimation (local) 49671949 49672515 147427 147993 NC_000014.9 velvet.10922 100.0 True fake: scaffold gap size wrong estimation (local) 49672800 49674663 149008 150871 NC_000014.9 velvet.10922 100.0 True fake: scaffold gap size wrong estimation (local) 49676048 49678015 154667 156634 NC_000014.9 velvet.10922 100.0 True fake: scaffold gap size wrong estimation (local) 49678950 49680770 158432 160252 NC_000014.9 velvet.10922 100.0 True local misassembly 49680908 49681524 160253 160869 NC_000014.9 velvet.10922 98.38 True fake: scaffold gap size wrong estimation (local) 49683389 49684212 163588 164411 NC_000014.9 velvet.10922 98.79 True relocation, scaffold gap is present, inconsistency = -18279 49666144 49666942 164622 165420 NC_000014.9 velvet.10922 100.0 True fake: scaffold gap size wrong estimation (local) 49667214 49668021 166641 167486 NC_000014.9 velvet.10922 100.0 True fake: scaffold gap size wrong estimation (extensive) 49684925 49685642 174602 175319 NC_000014.9 velvet.10922 100.0 True local misassembly 49685919 49687047 175320 176448 NC_000014.9 velvet.10922 99.03 True fake: scaffold gap size wrong estimation (local) 49689625 49690235 179679 180289 NC_000014.9 velvet.10922 98.36 True fake: scaffold gap size wrong estimation (local) 49690545 49691911 181631 182997 NC_000014.9 velvet.10922 99.85 True fake: scaffold gap size wrong estimation (local) 49692089 49693763 183243 184964 NC_000014.9 velvet.10922 99.7 True fake: scaffold gap size wrong estimation (local) 49694051 49694601 185983 186533 NC_000014.9 velvet.10922 100.0 True fake: scaffold gap size wrong estimation (local) 49697453 49698249 190161 190957 NC_000014.9 velvet.10922 100.0 True fake: scaffold gap size wrong estimation (local) 49699443 49700059 193559 194175 NC_000014.9 velvet.10922 98.22 True fake: scaffold gap size wrong estimation (local) 49702193 49703358 197074 198239 NC_000014.9 velvet.10922 100.0 True local misassembly 49703620 49704409 198240 199029 NC_000014.9 velvet.10922 98.73 True fake: scaffold gap size wrong estimation (local) 49704698 49705380 200566 201248 NC_000014.9 velvet.10922 99.71 True fake: scaffold gap size wrong estimation (local) 49705672 49707296 201399 202979 NC_000014.9 velvet.10922 96.97 True fake: scaffold gap size wrong estimation (local) 49708348 49711028 204894 207624 NC_000014.9 velvet.10922 99.89 True fake: scaffold gap size wrong estimation (local) 49715814 49716399 213927 214512 NC_000014.9 velvet.10922 100.0 True fake: not a misassembly (possible transposable element) 49848733 49850221 226719 225199 NC_000014.9 velvet.10922 99.03 True fake: not a misassembly (possible transposable element) 49739829 49740365 237360 237896 NC_000014.9 velvet.10922 99.81 True fake: scaffold gap size wrong estimation (local) 49741574 49742414 240420 241260 NC_000014.9 velvet.10922 99.76 True fake: scaffold gap size wrong estimation (local) 49743432 49744078 242101 242747 NC_000014.9 velvet.10922 100.0 True fake: scaffold gap size wrong estimation (local) 49744154 49746597 242758 245945 NC_000014.9 velvet.10922 99.96 True fake: scaffold gap size wrong estimation (local) 49747251 49748829 247407 248985 NC_000014.9 velvet.10922 99.75 True relocation, scaffold gap is present, inconsistency = 59684 49813038 49813659 254131 253510 NC_000014.9 velvet.10922 99.68 True fake: scaffold gap size wrong estimation (local) 49810344 49812799 257708 255250 NC_000014.9 velvet.10922 99.8 True fake: scaffold gap size wrong estimation (local) 49808444 49809106 261503 260841 NC_000014.9 velvet.10922 99.85 True fake: scaffold gap size wrong estimation (local) 49806491 49807561 264316 263246 NC_000014.9 velvet.10922 99.81 True fake: scaffold gap size wrong estimation (local) 49805560 49806213 265086 264433 NC_000014.9 velvet.10922 99.69 True fake: scaffold gap size wrong estimation (local) 49802284 49803512 269539 268311 NC_000014.9 velvet.10922 99.19 True fake: scaffold gap size wrong estimation (local) 49799213 49801201 273374 271387 NC_000014.9 velvet.10922 99.85 True fake: scaffold gap size wrong estimation (local) 49797625 49798626 275589 274588 NC_000014.9 velvet.10922 100.0 True fake: scaffold gap size wrong estimation (local) 49794968 49797317 278777 276512 NC_000014.9 velvet.10922 96.41 True relocation, scaffold gap is present, inconsistency = 23318 49769897 49771084 280530 279343 NC_000014.9 velvet.10922 99.83 True fake: scaffold gap size wrong estimation (local) 49768702 49769652 282070 281120 NC_000014.9 velvet.10922 99.79 True fake: scaffold gap size wrong estimation (local) 49766855 49767986 284766 283348 NC_000014.9 velvet.10922 99.91 True inversion, scaffold gap is present 49771982 49772711 285585 286314 NC_000014.9 velvet.10922 99.59 True fake: scaffold gap size wrong estimation (local) 49773893 49775635 288370 290112 NC_000014.9 velvet.10922 99.77 True relocation, scaffold gap is present, inconsistency = 8656 49784494 49785653 291474 290315 NC_000014.9 velvet.10922 99.91 True local misassembly 49783371 49784198 292302 291475 NC_000014.9 velvet.10922 99.88 True fake: scaffold gap size wrong estimation (local) 49781700 49783277 296344 294767 NC_000014.9 velvet.10922 100.0 True fake: scaffold gap size wrong estimation (local) 49778996 49781100 299885 297781 NC_000014.9 velvet.10922 99.76 True fake: scaffold gap size wrong estimation (local) 49777568 49778710 302110 300968 NC_000014.9 velvet.10922 99.83 True fake: scaffold gap size wrong estimation (local) 49759840 49760540 326149 325449 NC_000014.9 velvet.10922 100.0 True fake: not a misassembly (possible transposable element) 40159163 40160861 326160 327857 NC_000014.9 velvet.10922 99.82 True fake: not a misassembly (possible transposable element) 49756500 49757198 331815 331117 NC_000014.9 velvet.10922 100.0 True relocation, scaffold gap is present, inconsistency = -12246 49764425 49764932 336136 335629 NC_000014.9 velvet.10922 99.8 True fake: scaffold gap size wrong estimation (local) 49761325 49762544 340223 339004 NC_000014.9 velvet.10922 99.67 True fake: scaffold gap size wrong estimation (local) 49738615 49739774 362202 361043 NC_000014.9 velvet.10922 100.0 True CONTIG velvet.10922 362202 misassembled CONTIG velvet.10952 408 unaligned CONTIG velvet.10956 294 unaligned 102108805 102109341 1 537 NC_000014.9 velvet.10994 100.0 True CONTIG velvet.10994 537 correct 20947264 20947763 500 1 NC_000014.9 velvet.11028 100.0 True CONTIG velvet.11028 500 correct CONTIG velvet.11037 334 unaligned CONTIG velvet.11046 364 unaligned CONTIG velvet.11076 227 unaligned CONTIG velvet.11102 242 unaligned CONTIG velvet.11123 488 unaligned CONTIG velvet.11127 327 unaligned CONTIG velvet.11148 323 unaligned CONTIG velvet.11150 209 unaligned CONTIG velvet.11167 238 unaligned CONTIG velvet.11201 201 unaligned 106390608 106391435 1 828 NC_000014.9 velvet.11230 100.0 True CONTIG velvet.11230 828 correct CONTIG velvet.11236 306 unaligned 19150472 19150996 1 525 NC_000014.9 velvet.11253 99.24 True CONTIG velvet.11253 525 correct CONTIG velvet.11261 487 unaligned CONTIG velvet.11264 241 unaligned CONTIG velvet.11268 219 unaligned CONTIG velvet.11282 258 unaligned CONTIG velvet.11294 239 unaligned CONTIG velvet.11297 276 unaligned CONTIG velvet.11321 3686 unaligned CONTIG velvet.11328 216 unaligned CONTIG velvet.11333 205 unaligned 105699043 105699772 13 742 NC_000014.9 velvet.11336 100.0 True CONTIG velvet.11336 742 correct CONTIG velvet.11343 344 unaligned CONTIG velvet.11344 303 unaligned CONTIG velvet.11376 607 unaligned CONTIG velvet.11378 296 unaligned CONTIG velvet.11422 247 unaligned CONTIG velvet.11446 207 unaligned CONTIG velvet.11531 223 unaligned CONTIG velvet.11532 208 unaligned CONTIG velvet.11536 295 unaligned 47165217 47166053 1 837 NC_000014.9 velvet.11549 99.76 True fake: scaffold gap size wrong estimation (local) 47166330 47168301 1631 3602 NC_000014.9 velvet.11549 99.95 True CONTIG velvet.11549 3602 correct CONTIG velvet.11555 224 unaligned CONTIG velvet.11556 208 unaligned CONTIG velvet.11566 205 unaligned 97895518 97897174 1 1661 NC_000014.9 velvet.11570 99.52 True CONTIG velvet.11570 1661 correct CONTIG velvet.11587 358 unaligned CONTIG velvet.11612 295 unaligned 19328871 19329674 1 804 NC_000014.9 velvet.11617 99.88 True CONTIG velvet.11617 804 correct 19491561 19495677 4117 1 NC_000014.9 velvet.11621 99.47 True CONTIG velvet.11621 4117 correct CONTIG velvet.11625 526 unaligned 19160567 19161183 617 1 NC_000014.9 velvet.11626 99.84 True CONTIG velvet.11626 617 correct CONTIG velvet.11674 319 unaligned CONTIG velvet.11690 228 unaligned CONTIG velvet.11706 249 unaligned 64109083 64110600 1 1518 NC_000014.9 velvet.11717 100.0 True CONTIG velvet.11717 1518 correct 18870386 18871032 1 647 NC_000014.9 velvet.11725 99.23 True CONTIG velvet.11725 647 correct 19675321 19676018 1 697 NC_000014.9 velvet.11735 99.57 True CONTIG velvet.11735 697 correct 73582183 73583097 915 1 NC_000014.9 velvet.11738 100.0 True CONTIG velvet.11738 915 correct 36942153 36943244 1 1092 NC_000014.9 velvet.11758 100.0 True fake: scaffold gap size wrong estimation (local) 36943485 36945608 2329 4452 NC_000014.9 velvet.11758 99.91 True CONTIG velvet.11758 4467 correct CONTIG velvet.11769 338 unaligned CONTIG velvet.11770 279 unaligned CONTIG velvet.11772 368 unaligned 62610642 62611161 1 520 NC_000014.9 velvet.11774 100.0 True CONTIG velvet.11774 520 correct CONTIG velvet.11777 337 unaligned 53255802 53256369 570 1 NC_000014.9 velvet.11781 99.65 True CONTIG velvet.11781 570 correct CONTIG velvet.11782 368 unaligned 92815976 92816975 1000 1 NC_000014.9 velvet.11789 99.8 True CONTIG velvet.11789 1000 correct CONTIG velvet.11800 357 unaligned CONTIG velvet.11847 213 unaligned CONTIG velvet.11864 207 unaligned CONTIG velvet.11865 231 unaligned CONTIG velvet.11873 225 unaligned CONTIG velvet.11878 203 unaligned 50756188 50759510 2033 5355 NC_000014.9 velvet.11897 99.97 True fake: scaffold gap size wrong estimation (local) 50759805 50763532 6358 10212 NC_000014.9 velvet.11897 96.6 True relocation, scaffold gap is present, inconsistency = 27119449 77882992 77886801 10223 14032 NC_000014.9 velvet.11897 99.97 True relocation, scaffold gap is present, inconsistency = -27112060 50789611 50794383 28902 34515 NC_000014.9 velvet.11897 99.91 True relocation, scaffold gap is present, inconsistency = 22681415 73482916 73483439 42156 41633 NC_000014.9 velvet.11897 100.0 True relocation, scaffold gap is present, inconsistency = -29092305 102570383 102571823 46968 45554 NC_000014.9 velvet.11897 98.04 True fake: scaffold gap size wrong estimation (local) 102567604 102569133 50754 49177 NC_000014.9 velvet.11897 96.04 True fake: scaffold gap size wrong estimation (local) 102532163 102532708 80385 79840 NC_000014.9 velvet.11897 100.0 True relocation, scaffold gap is present, inconsistency = 51701432 50819663 50827508 83608 91569 NC_000014.9 velvet.11897 99.95 True relocation, scaffold gap is present, inconsistency = 51691125 102530798 102531499 104435 103734 NC_000014.9 velvet.11897 98.29 True fake: scaffold gap size wrong estimation (local) 102527339 102528186 108533 107686 NC_000014.9 velvet.11897 99.88 True fake: scaffold gap size wrong estimation (local) 102523237 102526237 113368 110422 NC_000014.9 velvet.11897 98.03 True relocation, scaffold gap is present, inconsistency = 38553387 63967168 63967916 115302 116050 NC_000014.9 velvet.11897 100.0 True local misassembly 63968162 63968725 116051 116614 NC_000014.9 velvet.11897 98.23 True relocation, scaffold gap is present, inconsistency = -13121373 50847363 50848516 116625 117778 NC_000014.9 velvet.11897 100.0 True fake: not a misassembly (possible transposable element) 35365062 35365910 117789 118637 NC_000014.9 velvet.11897 99.88 True fake: not a misassembly (possible transposable element) 50848533 50849320 118639 119426 NC_000014.9 velvet.11897 98.86 True relocation, inconsistency = -15483411 35365911 35367627 119428 121144 NC_000014.9 velvet.11897 99.48 True relocation, scaffold gap is present, inconsistency = 15496423 50864061 50865503 121155 122597 NC_000014.9 velvet.11897 99.93 True relocation, scaffold gap is present, inconsistency = -15602 50849912 50851921 122608 124617 NC_000014.9 velvet.11897 100.0 True relocation, scaffold gap is present, inconsistency = -15482050 35369882 35371712 124628 126458 NC_000014.9 velvet.11897 99.89 True fake: scaffold gap size wrong estimation (local) 35374271 35375067 129396 130192 NC_000014.9 velvet.11897 100.0 True fake: scaffold gap size wrong estimation (local) 35375708 35376857 133817 134941 NC_000014.9 velvet.11897 97.63 True fake: scaffold gap size wrong estimation (local) 35383013 35386193 144160 147340 NC_000014.9 velvet.11897 99.78 True fake: scaffold gap size wrong estimation (local) 35409051 35410006 163672 164627 NC_000014.9 velvet.11897 99.69 True fake: scaffold gap size wrong estimation (local) 35410854 35411934 164815 165938 NC_000014.9 velvet.11897 99.91 True fake: scaffold gap size wrong estimation (local) 35412681 35413800 167686 168805 NC_000014.9 velvet.11897 99.91 True fake: scaffold gap size wrong estimation (local) 35414454 35416352 170395 172293 NC_000014.9 velvet.11897 99.89 True fake: scaffold gap size wrong estimation (local) 35416714 35417256 174023 174565 NC_000014.9 velvet.11897 99.82 True fake: scaffold gap size wrong estimation (local) 35417547 35419031 174600 176084 NC_000014.9 velvet.11897 99.87 True fake: scaffold gap size wrong estimation (local) 35419589 35420933 177556 178900 NC_000014.9 velvet.11897 99.11 True fake: scaffold gap size wrong estimation (local) 35421474 35422042 180201 180769 NC_000014.9 velvet.11897 99.82 True fake: scaffold gap size wrong estimation (local) 35422043 35422686 180809 181452 NC_000014.9 velvet.11897 96.58 True relocation, scaffold gap is present, inconsistency = 60960932 96384633 96385733 182467 183567 NC_000014.9 velvet.11897 99.91 True fake: not a misassembly (possible transposable element) 30353121 30359702 183578 190159 NC_000014.9 velvet.11897 99.98 True fake: not a misassembly (possible transposable element) 96385744 96389137 190170 194228 NC_000014.9 velvet.11897 99.88 True relocation, scaffold gap is present, inconsistency = -66028970 30360452 30361085 194513 195146 NC_000014.9 velvet.11897 100.0 True fake: scaffold gap size wrong estimation (local) 30361316 30363567 196438 198689 NC_000014.9 velvet.11897 99.96 True fake: scaffold gap size wrong estimation (local) 30377038 30384499 212793 220254 NC_000014.9 velvet.11897 99.99 True fake: scaffold gap size wrong estimation (local) 30384623 30386962 221153 223492 NC_000014.9 velvet.11897 100.0 True fake: scaffold gap size wrong estimation (local) 30387270 30391366 224536 228632 NC_000014.9 velvet.11897 100.0 True fake: scaffold gap size wrong estimation (local) 30391609 30392665 228748 229804 NC_000014.9 velvet.11897 100.0 True fake: scaffold gap size wrong estimation (local) 30392954 30396645 230930 234621 NC_000014.9 velvet.11897 99.97 True fake: not a misassembly (possible transposable element) 35442715 35447139 235863 240287 NC_000014.9 velvet.11897 99.95 True fake: not a misassembly (possible transposable element) 30396667 30399328 240298 242959 NC_000014.9 velvet.11897 100.0 True relocation, scaffold gap is present, inconsistency = 5048206 35475845 35480049 271270 276172 NC_000014.9 velvet.11897 99.98 True fake: scaffold gap size wrong estimation (local) 35480963 35485122 277461 282248 NC_000014.9 velvet.11897 96.39 True fake: scaffold gap size wrong estimation (local) 35485238 35486572 283339 284762 NC_000014.9 velvet.11897 100.0 True fake: scaffold gap size wrong estimation (local) 35488818 35489319 285483 285984 NC_000014.9 velvet.11897 100.0 True relocation, scaffold gap is present, inconsistency = 6682420 28804718 28805556 287664 286826 NC_000014.9 velvet.11897 100.0 True local misassembly 28805839 28807327 289639 288151 NC_000014.9 velvet.11897 99.8 True relocation, scaffold gap is present, inconsistency = -6688212 35492095 35494040 291595 289650 NC_000014.9 velvet.11897 100.0 True fake: not a misassembly (possible transposable element) 28801198 28803431 291606 293839 NC_000014.9 velvet.11897 99.91 True fake: not a misassembly (possible transposable element) 35490457 35491411 295252 294298 NC_000014.9 velvet.11897 100.0 True CONTIG velvet.11897 317808 misassembled CONTIG velvet.11900 304 unaligned CONTIG velvet.11906 415 unaligned 19331609 19334989 3381 1 NC_000014.9 velvet.11925 99.82 True CONTIG velvet.11925 3381 correct CONTIG velvet.11968 245 unaligned CONTIG velvet.11978 468 unaligned CONTIG velvet.11986 291 unaligned CONTIG velvet.12007 456 unaligned CONTIG velvet.12032 236 unaligned CONTIG velvet.12057 293 unaligned 92778859 92779560 1 702 NC_000014.9 velvet.12064 99.86 True CONTIG velvet.12064 702 correct CONTIG velvet.12102 208 unaligned CONTIG velvet.12108 435 unaligned CONTIG velvet.12119 320 unaligned CONTIG velvet.12120 259 unaligned CONTIG velvet.12133 267 unaligned CONTIG velvet.12136 270 unaligned CONTIG velvet.12137 254 unaligned 19115956 19120232 1 4277 NC_000014.9 velvet.12154 99.81 True CONTIG velvet.12154 4277 correct CONTIG velvet.12155 274 unaligned 19178987 19181062 2077 1 NC_000014.9 velvet.12184 99.52 True CONTIG velvet.12184 2077 correct 103081740 103082339 9 608 NC_000014.9 velvet.12186 100.0 True CONTIG velvet.12186 608 correct CONTIG velvet.12201 428 unaligned 105655748 105656357 1 610 NC_000014.9 velvet.12210 99.51 True CONTIG velvet.12210 610 correct CONTIG velvet.12215 239 unaligned CONTIG velvet.12250 261 unaligned 98283575 98286356 1 2783 NC_000014.9 velvet.12310 99.53 True CONTIG velvet.12310 2783 correct CONTIG velvet.12321 356 unaligned CONTIG velvet.12340 414 unaligned 76848537 76849189 1 653 NC_000014.9 velvet.12342 99.85 True CONTIG velvet.12342 653 correct CONTIG velvet.12352 229 unaligned CONTIG velvet.12353 208 unaligned 20756052 20756962 911 1 NC_000014.9 velvet.12366 99.89 True CONTIG velvet.12366 911 correct CONTIG velvet.12420 444 unaligned CONTIG velvet.12437 338 unaligned CONTIG velvet.12447 205 unaligned CONTIG velvet.12453 385 unaligned 104347934 104348576 1 643 NC_000014.9 velvet.12489 100.0 True CONTIG velvet.12489 643 correct CONTIG velvet.12496 223 unaligned CONTIG velvet.12514 405 unaligned CONTIG velvet.12517 271 unaligned CONTIG velvet.12536 205 unaligned CONTIG velvet.12548 370 unaligned CONTIG velvet.12564 425 unaligned CONTIG velvet.12568 381 unaligned CONTIG velvet.12603 432 unaligned 104836139 104836741 603 1 NC_000014.9 velvet.12617 99.83 True CONTIG velvet.12617 603 correct CONTIG velvet.12623 272 unaligned CONTIG velvet.12627 229 unaligned 74968547 74969343 1 797 NC_000014.9 velvet.12646 100.0 True CONTIG velvet.12646 797 correct CONTIG velvet.12672 317 unaligned CONTIG velvet.12691 468 unaligned 54465370 54469375 1 4006 NC_000014.9 velvet.12698 100.0 True fake: scaffold gap size wrong estimation (local) 54469630 54473393 4924 9282 NC_000014.9 velvet.12698 99.89 True CONTIG velvet.12698 9282 correct 44770135 44773282 94 3241 NC_000014.9 velvet.12709 99.97 True fake: scaffold gap size wrong estimation (local) 44773537 44775622 4315 6400 NC_000014.9 velvet.12709 100.0 True fake: scaffold gap size wrong estimation (local) 44804347 44806577 32832 35062 NC_000014.9 velvet.12709 100.0 True CONTIG velvet.12709 35062 correct CONTIG velvet.12732 438 unaligned CONTIG velvet.12733 371 unaligned 34975303 34975943 1 641 NC_000014.9 velvet.12737 100.0 True CONTIG velvet.12737 641 correct CONTIG velvet.12759 3523 unaligned CONTIG velvet.12773 238 unaligned CONTIG velvet.12789 478 unaligned CONTIG velvet.12814 255 unaligned 106480504 106481245 742 1 NC_000014.9 velvet.12815 100.0 True CONTIG velvet.12815 742 correct CONTIG velvet.12834 245 unaligned 69400018 69402838 2916 1 NC_000014.9 velvet.12870 100.0 True CONTIG velvet.12870 2916 correct CONTIG velvet.12880 427 unaligned CONTIG velvet.12884 343 unaligned CONTIG velvet.12885 288 unaligned CONTIG velvet.12894 242 unaligned CONTIG velvet.12898 335 unaligned 18346969 18348495 1 1527 NC_000014.9 velvet.12974 100.0 True CONTIG velvet.12974 1527 correct CONTIG velvet.12987 297 unaligned CONTIG velvet.12999 297 unaligned 92894473 92895254 782 1 NC_000014.9 velvet.13016 99.74 True CONTIG velvet.13016 782 correct CONTIG velvet.13029 250 unaligned CONTIG velvet.13030 426 unaligned CONTIG velvet.13042 213 unaligned CONTIG velvet.13043 275 unaligned CONTIG velvet.13053 230 unaligned CONTIG velvet.13080 267 unaligned CONTIG velvet.13084 305 unaligned 93119099 93119768 670 1 NC_000014.9 velvet.13085 100.0 True fake: scaffold gap size wrong estimation (local) 93115948 93117480 4714 3183 NC_000014.9 velvet.13085 99.93 True CONTIG velvet.13085 4714 correct CONTIG velvet.13087 274 unaligned CONTIG velvet.13100 216 unaligned CONTIG velvet.13111 248 unaligned CONTIG velvet.13137 360 unaligned CONTIG velvet.13138 215 unaligned CONTIG velvet.13169 218 unaligned CONTIG velvet.13171 360 unaligned 34556891 34557526 636 1 NC_000014.9 velvet.13194 100.0 True CONTIG velvet.13194 636 correct 32555778 32556479 1 702 NC_000014.9 velvet.13200 99.86 True CONTIG velvet.13200 702 correct CONTIG velvet.13201 208 unaligned CONTIG velvet.13219 208 unaligned 85382694 85385822 1 4200 NC_000014.9 velvet.13232 99.94 True CONTIG velvet.13232 4200 correct 18620115 18620681 567 1 NC_000014.9 velvet.13240 99.65 True CONTIG velvet.13240 567 correct CONTIG velvet.13243 212 unaligned 104231893 104233280 35 1422 NC_000014.9 velvet.13264 99.93 True CONTIG velvet.13264 1422 correct 73773102 73773663 1 562 NC_000014.9 velvet.13265 100.0 True CONTIG velvet.13265 562 correct CONTIG velvet.13294 334 unaligned CONTIG velvet.13303 448 unaligned CONTIG velvet.13309 282 unaligned CONTIG velvet.13314 208 unaligned 73528517 73529117 601 1 NC_000014.9 velvet.13330 100.0 True CONTIG velvet.13330 601 correct 74750196 74750921 5739 6464 NC_000014.9 velvet.13336 100.0 True CONTIG velvet.13336 9656 correct_unaligned CONTIG velvet.13410 648 unaligned CONTIG velvet.13412 345 unaligned CONTIG velvet.13421 243 unaligned 20880307 20880910 1 604 NC_000014.9 velvet.13422 99.34 True CONTIG velvet.13422 604 correct 18630329 18631692 1364 1 NC_000014.9 velvet.13430 99.93 True CONTIG velvet.13430 1364 correct CONTIG velvet.13432 359 unaligned 106174826 106175736 911 1 NC_000014.9 velvet.13451 99.89 True CONTIG velvet.13451 911 correct 76521276 76521879 1 604 NC_000014.9 velvet.13456 99.83 True CONTIG velvet.13456 604 correct 95972078 95973061 13 992 NC_000014.9 velvet.13458 99.49 True CONTIG velvet.13458 999 correct 75079216 75080083 868 1 NC_000014.9 velvet.13477 99.65 True CONTIG velvet.13477 868 correct CONTIG velvet.13495 206 unaligned 19629106 19629622 517 1 NC_000014.9 velvet.13519 99.81 True CONTIG velvet.13519 517 correct CONTIG velvet.13521 304 unaligned 18611628 18612334 707 1 NC_000014.9 velvet.13525 99.86 True CONTIG velvet.13525 707 correct CONTIG velvet.13547 437 unaligned CONTIG velvet.13570 258 unaligned CONTIG velvet.13588 251 unaligned 18986615 18987434 1 821 NC_000014.9 velvet.13589 99.51 True CONTIG velvet.13589 821 correct CONTIG velvet.13604 291 unaligned 36631198 36631988 1 791 NC_000014.9 velvet.13608 100.0 True CONTIG velvet.13608 791 correct CONTIG velvet.13621 312 unaligned CONTIG velvet.13622 228 unaligned 34540138 34540666 29660 29132 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 34537266 34538106 33278 32438 NC_000014.9 velvet.13625 98.57 True fake: scaffold gap size wrong estimation (local) 34535874 34536450 34503 33927 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 34533295 34534131 38011 37175 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 34529100 34529600 44655 44155 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 34527169 34528043 47902 47028 NC_000014.9 velvet.13625 99.66 True fake: scaffold gap size wrong estimation (local) 34524658 34525736 51365 50287 NC_000014.9 velvet.13625 99.72 True fake: scaffold gap size wrong estimation (local) 34521907 34523224 54970 53626 NC_000014.9 velvet.13625 97.84 True fake: scaffold gap size wrong estimation (local) 34518604 34519189 58909 58324 NC_000014.9 velvet.13625 99.83 True fake: scaffold gap size wrong estimation (local) 34515791 34516797 63029 62023 NC_000014.9 velvet.13625 98.91 True fake: scaffold gap size wrong estimation (local) 34501667 34503018 74384 73033 NC_000014.9 velvet.13625 100.0 True relocation, scaffold gap is present, inconsistency = 55563704 90067264 90068348 74926 76010 NC_000014.9 velvet.13625 99.91 True fake: scaffold gap size wrong estimation (local) 90069543 90071684 77949 80090 NC_000014.9 velvet.13625 99.11 True fake: scaffold gap size wrong estimation (local) 90071929 90073691 81045 82807 NC_000014.9 velvet.13625 99.55 True fake: not a misassembly (possible transposable element) 91588175 91590304 82818 84947 NC_000014.9 velvet.13625 99.86 True fake: not a misassembly (possible transposable element) 90074230 90075522 85067 86359 NC_000014.9 velvet.13625 99.92 True relocation, scaffold gap is present, inconsistency = -20386 90055147 90057552 86370 88775 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 90057852 90065998 89771 97966 NC_000014.9 velvet.13625 99.14 True fake: scaffold gap size wrong estimation (extensive) 90077424 90078172 117152 117900 NC_000014.9 velvet.13625 99.73 True fake: scaffold gap size wrong estimation (local) 90078497 90080198 118741 120442 NC_000014.9 velvet.13625 99.88 True fake: scaffold gap size wrong estimation (local) 90080474 90082135 121225 122886 NC_000014.9 velvet.13625 99.88 True fake: scaffold gap size wrong estimation (local) 90082369 90084973 123745 126294 NC_000014.9 velvet.13625 97.65 True fake: scaffold gap size wrong estimation (local) 90085897 90087134 128168 129405 NC_000014.9 velvet.13625 99.84 True local misassembly 90087266 90088032 129406 130172 NC_000014.9 velvet.13625 98.7 True fake: scaffold gap size wrong estimation (local) 90090678 90091942 133883 135097 NC_000014.9 velvet.13625 96.02 True fake: scaffold gap size wrong estimation (local) 90092942 90094648 136979 138685 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 90094952 90098492 139766 143314 NC_000014.9 velvet.13625 100.0 True fake: not a misassembly (possible transposable element) 83885480 83888883 159395 155992 NC_000014.9 velvet.13625 99.91 True fake: not a misassembly (possible transposable element) 90117643 90118917 159406 160680 NC_000014.9 velvet.13625 99.76 True fake: scaffold gap size wrong estimation (local) 90120939 90121746 163388 164195 NC_000014.9 velvet.13625 98.51 True fake: scaffold gap size wrong estimation (local) 90149665 90150870 192767 193972 NC_000014.9 velvet.13625 99.92 True relocation, scaffold gap is present, inconsistency = 6284691 83858374 83864963 200669 193983 NC_000014.9 velvet.13625 99.94 True fake: scaffold gap size wrong estimation (local) 83856163 83858086 203696 201773 NC_000014.9 velvet.13625 99.9 True fake: not a misassembly (possible transposable element) 90146613 90149060 203707 206187 NC_000014.9 velvet.13625 99.51 True fake: not a misassembly (possible transposable element) 83853746 83856105 208557 206198 NC_000014.9 velvet.13625 99.92 True fake: scaffold gap size wrong estimation (local) 83852893 83853540 209859 209212 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 83841368 83852611 222869 210623 NC_000014.9 velvet.13625 99.94 True fake: scaffold gap size wrong estimation (local) 83839480 83841244 225380 223616 NC_000014.9 velvet.13625 99.94 True fake: scaffold gap size wrong estimation (local) 83833735 83839225 231699 226209 NC_000014.9 velvet.13625 99.95 True fake: scaffold gap size wrong estimation (local) 83820528 83833483 246674 232715 NC_000014.9 velvet.13625 99.98 True fake: scaffold gap size wrong estimation (local) 83819454 83820217 247614 246851 NC_000014.9 velvet.13625 99.74 True fake: scaffold gap size wrong estimation (local) 83811859 83819182 256590 247889 NC_000014.9 velvet.13625 97.31 True fake: scaffold gap size wrong estimation (local) 83810371 83811728 258768 257411 NC_000014.9 velvet.13625 99.93 True relocation, scaffold gap is present, inconsistency = 42322 83750781 83767964 258853 276868 NC_000014.9 velvet.13625 99.94 True fake: scaffold gap size wrong estimation (local) 83776381 83784238 281646 289927 NC_000014.9 velvet.13625 99.99 True fake: scaffold gap size wrong estimation (local) 83784547 83790007 290818 296278 NC_000014.9 velvet.13625 99.87 True relocation, scaffold gap is present, inconsistency = -21481 83768537 83770727 296289 298479 NC_000014.9 velvet.13625 99.5 True local misassembly 83770740 83774924 300944 305128 NC_000014.9 velvet.13625 99.71 True relocation, scaffold gap is present, inconsistency = -16101580 67673355 67674588 305139 306372 NC_000014.9 velvet.13625 99.92 True relocation, scaffold gap is present, inconsistency = 7047645 60624858 60625699 307224 306383 NC_000014.9 velvet.13625 99.76 True relocation, scaffold gap is present, inconsistency = -15997940 76622259 76622787 307763 307235 NC_000014.9 velvet.13625 99.62 True relocation, scaffold gap is present, inconsistency = 7151854 83775054 83776008 308176 309130 NC_000014.9 velvet.13625 99.9 True relocation, scaffold gap is present, inconsistency = -16100318 67676517 67677808 309957 311249 NC_000014.9 velvet.13625 99.85 True fake: not a misassembly (possible transposable element) 29672350 29675509 314419 311260 NC_000014.9 velvet.13625 100.0 True fake: not a misassembly (possible transposable element) 67680698 67681519 314546 315367 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 67681732 67684601 316179 319048 NC_000014.9 velvet.13625 99.9 True relocation, scaffold gap is present, inconsistency = 38012110 29665732 29669611 323377 319059 NC_000014.9 velvet.13625 100.0 True relocation, scaffold gap is present, inconsistency = -54133132 83792526 83798853 329789 323388 NC_000014.9 velvet.13625 99.97 True fake: scaffold gap size wrong estimation (local) 83790391 83791598 332612 331405 NC_000014.9 velvet.13625 100.0 True relocation, scaffold gap is present, inconsistency = 7306 83798915 83801769 332623 335477 NC_000014.9 velvet.13625 99.89 True fake: scaffold gap size wrong estimation (local) 83801928 83807633 336388 342093 NC_000014.9 velvet.13625 99.98 True fake: scaffold gap size wrong estimation (local) 83807914 83808553 343004 343643 NC_000014.9 velvet.13625 100.0 True relocation, scaffold gap is present, inconsistency = 56230727 27570407 27576702 350424 344128 NC_000014.9 velvet.13625 99.81 True relocation, scaffold gap is present, inconsistency = 6460480 21105696 21108633 354651 351718 NC_000014.9 velvet.13625 99.76 True local misassembly 21108778 21111413 358319 355684 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 21100533 21105463 363260 358330 NC_000014.9 velvet.13625 99.9 True fake: scaffold gap size wrong estimation (local) 21098602 21100084 365989 364507 NC_000014.9 velvet.13625 99.93 True fake: scaffold gap size wrong estimation (local) 21088641 21098135 376815 367226 NC_000014.9 velvet.13625 99.93 True relocation, scaffold gap is present, inconsistency = 69006935 90105081 90106345 376826 378090 NC_000014.9 velvet.13625 100.0 True relocation, scaffold gap is present, inconsistency = 10250068 100356424 100357477 378101 379154 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 100358434 100363391 380932 385889 NC_000014.9 velvet.13625 99.8 True fake: scaffold gap size wrong estimation (local) 100363541 100365147 386831 388408 NC_000014.9 velvet.13625 98.06 True fake: scaffold gap size wrong estimation (local) 100365592 100367336 389179 390964 NC_000014.9 velvet.13625 99.88 True fake: scaffold gap size wrong estimation (local) 100367968 100368716 392421 393169 NC_000014.9 velvet.13625 99.87 True local misassembly 100368943 100369519 393170 393746 NC_000014.9 velvet.13625 98.27 True fake: scaffold gap size wrong estimation (local) 100369941 100371194 394955 396169 NC_000014.9 velvet.13625 96.38 True relocation, scaffold gap is present, inconsistency = 79315614 21049805 21053371 400756 397125 NC_000014.9 velvet.13625 98.02 True fake: scaffold gap size wrong estimation (local) 21032383 21046435 414979 400767 NC_000014.9 velvet.13625 99.67 True relocation, scaffold gap is present, inconsistency = 79348472 100394918 100395993 414990 416065 NC_000014.9 velvet.13625 99.91 True relocation, scaffold gap is present, inconsistency = 79335406 21057438 21059494 418149 416083 NC_000014.9 velvet.13625 99.37 True fake: scaffold gap size wrong estimation (local) 21053773 21057153 422486 419108 NC_000014.9 velvet.13625 99.88 True relocation, scaffold gap is present, inconsistency = 69248921 90306841 90307473 423253 423885 NC_000014.9 velvet.13625 99.84 True relocation, scaffold gap is present, inconsistency = 10073313 100380797 100386637 423896 429736 NC_000014.9 velvet.13625 99.91 True fake: scaffold gap size wrong estimation (local) 100386926 100390417 430788 434279 NC_000014.9 velvet.13625 100.0 True relocation, scaffold gap is present, inconsistency = -10089557 90300886 90306557 434305 439976 NC_000014.9 velvet.13625 99.89 True relocation, scaffold gap is present, inconsistency = -148563 90158005 90159946 439987 441928 NC_000014.9 velvet.13625 100.0 True indel: indel (<= 5bp) 90159949 90160604 441929 442584 NC_000014.9 velvet.13625 99.85 True local misassembly 90163984 90166454 442585 445055 NC_000014.9 velvet.13625 99.35 True relocation, scaffold gap is present, inconsistency = -39517673 50648792 50650767 445066 447041 NC_000014.9 velvet.13625 99.85 True relocation, scaffold gap is present, inconsistency = 20490811 71141589 71143984 447052 449447 NC_000014.9 velvet.13625 99.96 True fake: not a misassembly (possible transposable element) 90156206 90157561 450896 449541 NC_000014.9 velvet.13625 99.78 True fake: not a misassembly (possible transposable element) 71144548 71147400 452365 455246 NC_000014.9 velvet.13625 99.6 True fake: scaffold gap size wrong estimation (local) 71147842 71149370 456478 458006 NC_000014.9 velvet.13625 99.35 True relocation, scaffold gap is present, inconsistency = 50133439 21012331 21013649 460044 458760 NC_000014.9 velvet.13625 97.27 True fake: scaffold gap size wrong estimation (local) 21010620 21012306 464707 463021 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 21008257 21009687 467898 466468 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 20976415 20979985 497880 494310 NC_000014.9 velvet.13625 99.89 True fake: scaffold gap size wrong estimation (local) 20970236 20972348 503911 501813 NC_000014.9 velvet.13625 99.14 True fake: scaffold gap size wrong estimation (local) 20966013 20969931 509509 505186 NC_000014.9 velvet.13625 99.85 True fake: scaffold gap size wrong estimation (local) 20963258 20965713 512793 510339 NC_000014.9 velvet.13625 99.43 True fake: scaffold gap size wrong estimation (local) 20931142 20931920 545791 545013 NC_000014.9 velvet.13625 99.36 True fake: scaffold gap size wrong estimation (local) 20927576 20928079 546305 545802 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 20924969 20926028 549652 548593 NC_000014.9 velvet.13625 98.87 True local misassembly 20924223 20924842 550272 549653 NC_000014.9 velvet.13625 98.87 True fake: scaffold gap size wrong estimation (local) 20921014 20922044 555262 554231 NC_000014.9 velvet.13625 100.0 True relocation, scaffold gap is present, inconsistency = -12768 20932210 20933771 556834 555273 NC_000014.9 velvet.13625 99.04 True inversion, scaffold gap is present 20934203 20935807 556845 558497 NC_000014.9 velvet.13625 99.87 True relocation, scaffold gap is present, inconsistency = -22157 20922642 20923416 592215 591441 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 20919344 20920669 596348 595023 NC_000014.9 velvet.13625 99.7 True relocation, scaffold gap is present, inconsistency = -15179 20929818 20931055 601053 599816 NC_000014.9 velvet.13625 100.0 True inversion, scaffold gap is present 20936309 20936896 603343 603930 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 20938627 20939623 606340 607336 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 20939737 20940344 607486 608089 NC_000014.9 velvet.13625 99.34 True fake: scaffold gap size wrong estimation (local) 20941161 20942222 611187 612249 NC_000014.9 velvet.13625 98.97 True fake: scaffold gap size wrong estimation (local) 20942830 20944151 612260 613530 NC_000014.9 velvet.13625 96.0 True relocation, scaffold gap is present, inconsistency = 102977 20838777 20839842 614605 613541 NC_000014.9 velvet.13625 99.91 True relocation, scaffold gap is present, inconsistency = 61852 20901705 20904741 614616 617664 NC_000014.9 velvet.13625 99.15 True relocation, scaffold gap is present, inconsistency = 8431 20891405 20893263 619533 617675 NC_000014.9 velvet.13625 99.62 True fake: scaffold gap size wrong estimation (local) 20885822 20886336 626551 626037 NC_000014.9 velvet.13625 100.0 True inversion, scaffold gap is present 20894221 20894871 629510 630160 NC_000014.9 velvet.13625 99.08 True inversion, scaffold gap is present 20896434 20897793 636955 635596 NC_000014.9 velvet.13625 99.56 True fake: scaffold gap size wrong estimation (local) 20893267 20894131 640644 639772 NC_000014.9 velvet.13625 99.88 True fake: scaffold gap size wrong estimation (local) 20866246 20868534 670986 668706 NC_000014.9 velvet.13625 99.21 True relocation, scaffold gap is present, inconsistency = -70768416 91631642 91634651 674008 670997 NC_000014.9 velvet.13625 99.77 True relocation, scaffold gap is present, inconsistency = -498318 92128461 92129949 675507 674019 NC_000014.9 velvet.13625 99.93 True relocation, scaffold gap is present, inconsistency = -10772890 102900480 102901329 676378 675529 NC_000014.9 velvet.13625 100.0 True relocation, scaffold gap is present, inconsistency = 11269088 91627934 91631381 679898 676389 NC_000014.9 velvet.13625 97.89 True local misassembly 91626101 91627901 681930 680090 NC_000014.9 velvet.13625 99.48 True fake: scaffold gap size wrong estimation (local) 91621354 91622192 682779 681941 NC_000014.9 velvet.13625 99.88 True fake: scaffold gap size wrong estimation (local) 91619991 91621127 684064 682928 NC_000014.9 velvet.13625 99.74 True local misassembly 91622211 91622881 684745 684075 NC_000014.9 velvet.13625 99.85 True fake: scaffold gap size wrong estimation (local) 91618170 91619526 686792 685436 NC_000014.9 velvet.13625 99.63 True fake: scaffold gap size wrong estimation (local) 91617017 91618084 687985 686918 NC_000014.9 velvet.13625 99.53 True fake: scaffold gap size wrong estimation (local) 91616146 91616727 689178 688597 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 91612195 91614575 693577 691199 NC_000014.9 velvet.13625 99.45 True fake: scaffold gap size wrong estimation (local) 91609998 91611323 696526 695201 NC_000014.9 velvet.13625 99.92 True fake: scaffold gap size wrong estimation (local) 91607099 91609710 700272 697662 NC_000014.9 velvet.13625 99.54 True relocation, scaffold gap is present, inconsistency = 2065111 89515689 89516574 725686 726571 NC_000014.9 velvet.13625 99.44 True fake: scaffold gap size wrong estimation (local) 89517409 89518769 727885 729245 NC_000014.9 velvet.13625 99.04 True relocation, scaffold gap is present, inconsistency = 68639504 20876833 20877571 730317 729579 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 20871967 20872549 737298 736716 NC_000014.9 velvet.13625 100.0 True fake: not a misassembly (possible transposable element) 20872597 20874394 737309 739106 NC_000014.9 velvet.13625 99.83 True fake: not a misassembly (possible transposable element) 20870236 20871717 740642 739161 NC_000014.9 velvet.13625 98.99 True fake: scaffold gap size wrong estimation (local) 20868796 20869310 743362 742848 NC_000014.9 velvet.13625 99.81 True inversion, scaffold gap is present 20878529 20880244 746266 747982 NC_000014.9 velvet.13625 99.65 True relocation, scaffold gap is present, inconsistency = 81983957 102864425 102865486 749267 748206 NC_000014.9 velvet.13625 100.0 True relocation, scaffold gap is present, inconsistency = -9591 102872963 102874005 750358 749278 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 102869806 102872679 754228 751355 NC_000014.9 velvet.13625 99.97 True fake: scaffold gap size wrong estimation (local) 102862364 102864116 755990 754239 NC_000014.9 velvet.13625 99.83 True relocation, scaffold gap is present, inconsistency = 82010392 20848517 20849845 759445 758117 NC_000014.9 velvet.13625 100.0 True relocation, scaffold gap is present, inconsistency = 1774249 22624105 22624844 759456 760195 NC_000014.9 velvet.13625 99.86 True relocation, scaffold gap is present, inconsistency = 80236213 102861560 102862300 761438 760698 NC_000014.9 velvet.13625 99.73 True fake: not a misassembly (possible transposable element) 20847589 20848272 762190 761507 NC_000014.9 velvet.13625 99.85 True fake: not a misassembly (possible transposable element) 102857004 102858136 763579 762447 NC_000014.9 velvet.13625 99.74 True relocation, scaffold gap is present, inconsistency = 45276 102809825 102811370 763937 765482 NC_000014.9 velvet.13625 99.94 True relocation, scaffold gap is present, inconsistency = 81965282 20829443 20834225 780594 775800 NC_000014.9 velvet.13625 98.67 True fake: scaffold gap size wrong estimation (local) 20821211 20822623 782517 781105 NC_000014.9 velvet.13625 100.0 True relocation, scaffold gap is present, inconsistency = -7234 20827403 20828434 783559 782528 NC_000014.9 velvet.13625 99.9 True fake: scaffold gap size wrong estimation (local) 20825750 20826914 785244 784080 NC_000014.9 velvet.13625 98.97 True fake: scaffold gap size wrong estimation (local) 20823417 20824304 788820 787933 NC_000014.9 velvet.13625 99.89 True fake: not a misassembly (possible transposable element) 20816794 20817623 788831 789670 NC_000014.9 velvet.13625 98.69 True fake: not a misassembly (possible transposable element) 20817827 20819026 791117 789918 NC_000014.9 velvet.13625 99.92 True fake: scaffold gap size wrong estimation (local) 20810824 20811331 793677 793170 NC_000014.9 velvet.13625 99.8 True relocation, scaffold gap is present, inconsistency = 1849007 22660349 22660965 793688 794304 NC_000014.9 velvet.13625 99.84 True relocation, scaffold gap is present, inconsistency = 1842796 20815887 20816531 795969 795326 NC_000014.9 velvet.13625 97.67 True fake: scaffold gap size wrong estimation (local) 20811614 20813895 800818 798537 NC_000014.9 velvet.13625 99.65 True fake: scaffold gap size wrong estimation (local) 20806850 20810553 806467 802659 NC_000014.9 velvet.13625 99.89 True relocation, scaffold gap is present, inconsistency = 1852551 22663193 22665021 806556 808410 NC_000014.9 velvet.13625 98.33 True fake: scaffold gap size wrong estimation (local) 22665315 22665886 809501 810072 NC_000014.9 velvet.13625 100.0 True relocation, scaffold gap is present, inconsistency = -1939926 20726404 20728871 810516 812983 NC_000014.9 velvet.13625 99.88 True relocation, scaffold gap is present, inconsistency = 18668 20749786 20751368 815230 816812 NC_000014.9 velvet.13625 99.75 True fake: scaffold gap size wrong estimation (local) 20751609 20753940 818011 820342 NC_000014.9 velvet.13625 99.91 True fake: not a misassembly (possible transposable element) 20738485 20742745 824613 820353 NC_000014.9 velvet.13625 99.81 True fake: not a misassembly (possible transposable element) 20754221 20755872 825283 826934 NC_000014.9 velvet.13625 99.82 True relocation, scaffold gap is present, inconsistency = 17249 20732403 20736090 831503 827816 NC_000014.9 velvet.13625 99.92 True fake: scaffold gap size wrong estimation (local) 20730195 20731845 834571 832921 NC_000014.9 velvet.13625 99.94 True relocation, scaffold gap is present, inconsistency = -78705 20780777 20782927 862683 860544 NC_000014.9 velvet.13625 99.16 True fake: scaffold gap size wrong estimation (local) 20779620 20780548 864632 863557 NC_000014.9 velvet.13625 99.89 True fake: scaffold gap size wrong estimation (local) 20777163 20778728 867311 865746 NC_000014.9 velvet.13625 99.62 True fake: scaffold gap size wrong estimation (local) 20774884 20776916 870558 868526 NC_000014.9 velvet.13625 99.8 True fake: scaffold gap size wrong estimation (local) 20772787 20773345 873487 872929 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 20743478 20745009 904270 902739 NC_000014.9 velvet.13625 100.0 True relocation, scaffold gap is present, inconsistency = 20893 20706632 20707961 920227 918894 NC_000014.9 velvet.13625 100.0 True relocation, scaffold gap is present, inconsistency = -70873585 91576260 91577488 924184 922956 NC_000014.9 velvet.13625 99.92 True relocation, scaffold gap is present, inconsistency = 2055191 89520155 89521058 924195 925098 NC_000014.9 velvet.13625 99.67 True relocation, scaffold gap is present, inconsistency = -31819857 57701760 57702350 925657 926247 NC_000014.9 velvet.13625 99.83 True local misassembly 57701138 57701732 926728 927322 NC_000014.9 velvet.13625 100.0 True relocation, scaffold gap is present, inconsistency = 33872189 91573932 91575855 929256 927333 NC_000014.9 velvet.13625 99.84 True local misassembly 91572957 91573784 930084 929257 NC_000014.9 velvet.13625 100.0 True relocation, scaffold gap is present, inconsistency = -10186 91579351 91583132 933876 930095 NC_000014.9 velvet.13625 99.84 True relocation, scaffold gap is present, inconsistency = 33871878 57702354 57707462 933887 938995 NC_000014.9 velvet.13625 99.78 True fake: scaffold gap size wrong estimation (local) 57707628 57709148 939966 941486 NC_000014.9 velvet.13625 99.15 True relocation, scaffold gap is present, inconsistency = 36990409 20707987 20715501 950819 943204 NC_000014.9 velvet.13625 99.79 True fake: not a misassembly (possible transposable element) 20769413 20772812 950830 954300 NC_000014.9 velvet.13625 97.7 True fake: not a misassembly (possible transposable element) 20678315 20679660 978765 977428 NC_000014.9 velvet.13625 99.41 True relocation, scaffold gap is present, inconsistency = 68873924 89555092 89555852 980273 981033 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 89556435 89557758 981779 983102 NC_000014.9 velvet.13625 99.92 True fake: scaffold gap size wrong estimation (local) 89558030 89559146 984236 985352 NC_000014.9 velvet.13625 99.82 True fake: scaffold gap size wrong estimation (local) 89560276 89561259 986278 987261 NC_000014.9 velvet.13625 99.49 True fake: scaffold gap size wrong estimation (local) 89561509 89562291 988240 989022 NC_000014.9 velvet.13625 99.87 True relocation, scaffold gap is present, inconsistency = 90859 89654723 89655759 991631 990595 NC_000014.9 velvet.13625 99.9 True fake: scaffold gap size wrong estimation (local) 89650927 89651497 992225 991655 NC_000014.9 velvet.13625 100.0 True relocation, scaffold gap is present, inconsistency = 68983304 20637956 20639127 1021884 1020721 NC_000014.9 velvet.13625 99.15 True relocation, scaffold gap is present, inconsistency = -2066826 22704138 22704771 1022520 1021895 NC_000014.9 velvet.13625 98.56 True relocation, scaffold gap is present, inconsistency = 65819 22632581 22636230 1024609 1028258 NC_000014.9 velvet.13625 99.59 True relocation, scaffold gap is present, inconsistency = 68284 22705884 22707082 1030826 1029628 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 22705014 22705687 1033124 1032451 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 22670634 22672064 1062603 1061173 NC_000014.9 velvet.13625 99.86 True fake: scaffold gap size wrong estimation (local) 22667839 22670633 1067486 1064692 NC_000014.9 velvet.13625 100.0 True relocation, scaffold gap is present, inconsistency = -154328 22794226 22795047 1095427 1094606 NC_000014.9 velvet.13625 99.88 True fake: scaffold gap size wrong estimation (local) 22790999 22791818 1099282 1098463 NC_000014.9 velvet.13625 99.63 True fake: scaffold gap size wrong estimation (extensive) 22778013 22779472 1105163 1103704 NC_000014.9 velvet.13625 99.18 True local misassembly 22777145 22777789 1105808 1105164 NC_000014.9 velvet.13625 99.69 True fake: scaffold gap size wrong estimation (local) 22775093 22776620 1108878 1107351 NC_000014.9 velvet.13625 100.0 True relocation, scaffold gap is present, inconsistency = 75310 22698007 22699768 1108893 1110645 NC_000014.9 velvet.13625 99.49 True fake: scaffold gap size wrong estimation (local) 22700033 22703950 1111589 1115506 NC_000014.9 velvet.13625 99.9 True fake: not a misassembly (possible transposable element) 22772886 22775080 1117711 1115517 NC_000014.9 velvet.13625 99.95 True fake: not a misassembly (possible transposable element) 22710246 22710892 1117722 1118368 NC_000014.9 velvet.13625 100.0 True local misassembly 22707732 22709084 1118369 1119721 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 22709389 22710224 1120082 1120917 NC_000014.9 velvet.13625 99.76 True relocation, scaffold gap is present, inconsistency = 56868 22769051 22771846 1125671 1122876 NC_000014.9 velvet.13625 99.82 True fake: scaffold gap size wrong estimation (local) 22766028 22768909 1129537 1126656 NC_000014.9 velvet.13625 99.9 True fake: scaffold gap size wrong estimation (local) 22764183 22765315 1132287 1131155 NC_000014.9 velvet.13625 99.82 True relocation, scaffold gap is present, inconsistency = -25483 22788672 22789333 1133281 1132620 NC_000014.9 velvet.13625 99.4 True fake: scaffold gap size wrong estimation (local) 22783662 22784326 1140394 1139730 NC_000014.9 velvet.13625 99.85 True relocation, scaffold gap is present, inconsistency = 51196 22730005 22731899 1140961 1142836 NC_000014.9 velvet.13625 98.81 True relocation, scaffold gap is present, inconsistency = 10419 22743670 22744669 1145187 1144188 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 22742701 22743298 1146475 1145878 NC_000014.9 velvet.13625 98.33 True indel: indel (> 5bp) 22742063 22742622 1147035 1146476 NC_000014.9 velvet.13625 100.0 True fake: not a misassembly (possible transposable element) 22735018 22736232 1148437 1149651 NC_000014.9 velvet.13625 100.0 True fake: not a misassembly (possible transposable element) 22739222 22740883 1152104 1150443 NC_000014.9 velvet.13625 99.82 True inversion, scaffold gap is present 22738271 22738990 1152281 1153043 NC_000014.9 velvet.13625 99.86 True relocation, scaffold gap is present, inconsistency = -10964 22727159 22727862 1175119 1174416 NC_000014.9 velvet.13625 99.72 True fake: scaffold gap size wrong estimation (local) 22725624 22727072 1176687 1175239 NC_000014.9 velvet.13625 99.93 True fake: scaffold gap size wrong estimation (local) 22723336 22724684 1179854 1178506 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 22722021 22723004 1181367 1180384 NC_000014.9 velvet.13625 99.9 True fake: scaffold gap size wrong estimation (local) 22720954 22721698 1183019 1182154 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 22719910 22720684 1184288 1183514 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 22717059 22717649 1188061 1187471 NC_000014.9 velvet.13625 100.0 True relocation, scaffold gap is present, inconsistency = 5477077 28197451 28199659 1190786 1192994 NC_000014.9 velvet.13625 100.0 True relocation, scaffold gap is present, inconsistency = 52409734 80620128 80622301 1205902 1203729 NC_000014.9 velvet.13625 99.95 True fake: scaffold gap size wrong estimation (local) 80617507 80619357 1209397 1207547 NC_000014.9 velvet.13625 99.95 True fake: scaffold gap size wrong estimation (local) 80615868 80617187 1211547 1210232 NC_000014.9 velvet.13625 99.62 True fake: scaffold gap size wrong estimation (local) 80613580 80615603 1214410 1212387 NC_000014.9 velvet.13625 99.85 True relocation, scaffold gap is present, inconsistency = 52399457 28211039 28212346 1216187 1217492 NC_000014.9 velvet.13625 99.85 True fake: scaffold gap size wrong estimation (local) 28212641 28214184 1218777 1220284 NC_000014.9 velvet.13625 97.52 True relocation, scaffold gap is present, inconsistency = 13704 28227899 28229893 1220295 1222289 NC_000014.9 velvet.13625 99.85 True fake: scaffold gap size wrong estimation (local) 28231359 28235375 1224114 1228131 NC_000014.9 velvet.13625 98.59 True relocation, scaffold gap is present, inconsistency = -20465 28216383 28227873 1229604 1242486 NC_000014.9 velvet.13625 99.86 True fake: scaffold gap size wrong estimation (local) 28248494 28250112 1260265 1261883 NC_000014.9 velvet.13625 99.63 True relocation, scaffold gap is present, inconsistency = -14558 28235565 28237912 1261894 1264220 NC_000014.9 velvet.13625 99.06 True fake: scaffold gap size wrong estimation (local) 28238720 28239518 1265791 1266589 NC_000014.9 velvet.13625 99.75 True fake: scaffold gap size wrong estimation (local) 28250522 28251709 1277887 1279064 NC_000014.9 velvet.13625 98.3 True fake: scaffold gap size wrong estimation (local) 28252278 28252982 1280844 1281548 NC_000014.9 velvet.13625 99.57 True local misassembly 28253411 28254018 1281549 1282156 NC_000014.9 velvet.13625 95.56 True fake: scaffold gap size wrong estimation (local) 28259157 28267387 1282167 1290405 NC_000014.9 velvet.13625 99.82 True fake: scaffold gap size wrong estimation (local) 28267496 28268253 1290667 1291424 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 28268547 28270565 1292076 1294094 NC_000014.9 velvet.13625 99.9 True fake: scaffold gap size wrong estimation (local) 28271520 28272033 1295321 1295834 NC_000014.9 velvet.13625 99.03 True local misassembly 28270600 28271311 1296582 1297299 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 28273549 28275239 1300123 1301813 NC_000014.9 velvet.13625 99.88 True fake: scaffold gap size wrong estimation (local) 28305903 28306625 1330014 1330736 NC_000014.9 velvet.13625 100.0 True relocation, scaffold gap is present, inconsistency = 46358579 74665364 74666714 1332246 1330896 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 74664741 74665255 1332899 1332385 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 74659519 74664430 1338884 1333973 NC_000014.9 velvet.13625 99.9 True fake: scaffold gap size wrong estimation (local) 74657662 74659229 1341497 1339930 NC_000014.9 velvet.13625 99.87 True fake: scaffold gap size wrong estimation (local) 74650683 74657491 1349142 1342284 NC_000014.9 velvet.13625 99.96 True fake: scaffold gap size wrong estimation (local) 74647033 74650428 1353560 1350165 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 74645162 74646738 1356225 1354649 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 74644236 74644884 1357066 1356418 NC_000014.9 velvet.13625 99.85 True relocation, scaffold gap is present, inconsistency = 12646 74630532 74631579 1358124 1357077 NC_000014.9 velvet.13625 100.0 True relocation, scaffold gap is present, inconsistency = 46331596 28293428 28298925 1363702 1358135 NC_000014.9 velvet.13625 99.08 True fake: scaffold gap size wrong estimation (local) 28291632 28293009 1366359 1364980 NC_000014.9 velvet.13625 99.78 True inversion, scaffold gap is present 28299157 28305884 1366590 1374746 NC_000014.9 velvet.13625 96.17 True fake: scaffold gap size wrong estimation (local) 28306885 28309649 1376510 1379274 NC_000014.9 velvet.13625 99.93 True fake: scaffold gap size wrong estimation (local) 28324759 28330866 1391905 1398012 NC_000014.9 velvet.13625 99.92 True fake: scaffold gap size wrong estimation (local) 28332593 28335292 1400477 1403176 NC_000014.9 velvet.13625 99.93 True fake: scaffold gap size wrong estimation (local) 28335485 28336521 1404211 1405260 NC_000014.9 velvet.13625 97.32 True relocation, scaffold gap is present, inconsistency = -82214 28254318 28259107 1405271 1410060 NC_000014.9 velvet.13625 99.94 True fake: scaffold gap size wrong estimation (local) 28281399 28289318 1425922 1433841 NC_000014.9 velvet.13625 99.99 True fake: scaffold gap size wrong estimation (local) 28290560 28291293 1436108 1436841 NC_000014.9 velvet.13625 99.86 True relocation, scaffold gap is present, inconsistency = 62345 28354027 28358128 1437230 1441414 NC_000014.9 velvet.13625 97.8 True fake: scaffold gap size wrong estimation (local) 28358453 28373303 1442433 1457283 NC_000014.9 velvet.13625 99.93 True fake: scaffold gap size wrong estimation (local) 28373618 28375905 1458443 1460719 NC_000014.9 velvet.13625 99.34 True fake: scaffold gap size wrong estimation (local) 28400670 28402030 1482638 1483998 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 28402971 28404841 1485812 1487682 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 28405114 28405621 1488191 1488698 NC_000014.9 velvet.13625 100.0 True fake: scaffold gap size wrong estimation (local) 28405910 28409339 1489567 1492996 NC_000014.9 velvet.13625 99.97 True CONTIG velvet.13625 1519769 misassembled CONTIG velvet.13628 206 unaligned CONTIG velvet.13635 418 unaligned CONTIG velvet.13644 369 unaligned CONTIG velvet.13681 248 unaligned 62878317 62884544 6922 1 NC_000014.9 velvet.13687 99.92 True fake: scaffold gap size wrong estimation (local) 62876109 62876984 9856 8981 NC_000014.9 velvet.13687 99.89 True fake: scaffold gap size wrong estimation (local) 62843680 62846777 42131 39034 NC_000014.9 velvet.13687 100.0 True fake: scaffold gap size wrong estimation (local) 62840761 62843411 45783 43133 NC_000014.9 velvet.13687 100.0 True fake: scaffold gap size wrong estimation (local) 62830074 62840519 57345 46815 NC_000014.9 velvet.13687 99.15 True fake: scaffold gap size wrong estimation (local) 62829185 62829821 58081 57452 NC_000014.9 velvet.13687 98.57 True CONTIG velvet.13687 58081 correct CONTIG velvet.13715 285 unaligned CONTIG velvet.13728 206 unaligned CONTIG velvet.13737 252 unaligned CONTIG velvet.13739 325 unaligned CONTIG velvet.13760 223 unaligned 71674837 71675382 546 1 NC_000014.9 velvet.13772 100.0 True CONTIG velvet.13772 546 correct CONTIG velvet.13773 459 unaligned 23955213 23955841 629 1 NC_000014.9 velvet.13781 99.05 True CONTIG velvet.13781 629 correct CONTIG velvet.13782 293 unaligned CONTIG velvet.13804 205 unaligned 51690851 51691607 1 757 NC_000014.9 velvet.13810 100.0 True CONTIG velvet.13810 757 correct CONTIG velvet.13824 255 unaligned CONTIG velvet.13881 453 unaligned 68070778 68071345 395 962 NC_000014.9 velvet.13904 100.0 True CONTIG velvet.13904 962 correct 85827127 85827677 1 551 NC_000014.9 velvet.13909 99.64 True CONTIG velvet.13909 551 correct CONTIG velvet.13960 319 unaligned CONTIG velvet.13961 248 unaligned 63156273 63156999 727 1 NC_000014.9 velvet.13971 99.86 True CONTIG velvet.13971 768 correct CONTIG velvet.13973 280 unaligned CONTIG velvet.14009 238 unaligned CONTIG velvet.14020 337 unaligned CONTIG velvet.14022 292 unaligned CONTIG velvet.14032 446 unaligned 53676950 53680092 1 3143 NC_000014.9 velvet.14055 99.94 True CONTIG velvet.14055 3143 correct CONTIG velvet.14058 210 unaligned CONTIG velvet.14097 394 unaligned CONTIG velvet.14104 267 unaligned CONTIG velvet.14122 332 unaligned 18865210 18865977 768 1 NC_000014.9 velvet.14123 100.0 True CONTIG velvet.14123 768 correct CONTIG velvet.14149 253 unaligned 92701525 92702271 1 747 NC_000014.9 velvet.14162 100.0 True CONTIG velvet.14162 747 correct CONTIG velvet.14164 348 unaligned CONTIG velvet.14179 429 unaligned CONTIG velvet.14190 354 unaligned CONTIG velvet.14208 434 unaligned CONTIG velvet.14214 222 unaligned CONTIG velvet.14227 218 unaligned CONTIG velvet.14247 439 unaligned 52082704 52104620 1 22148 NC_000014.9 velvet.14252 99.59 True relocation, scaffold gap is present, inconsistency = -32108858 20008323 20009518 34709 35904 NC_000014.9 velvet.14252 100.0 True fake: scaffold gap size wrong estimation (local) 20009774 20010719 36178 37123 NC_000014.9 velvet.14252 99.79 True fake: scaffold gap size wrong estimation (local) 20010994 20026077 38171 54012 NC_000014.9 velvet.14252 99.47 True fake: scaffold gap size wrong estimation (local) 20026317 20027121 54673 55476 NC_000014.9 velvet.14252 99.13 True fake: scaffold gap size wrong estimation (local) 20027405 20029690 56310 58585 NC_000014.9 velvet.14252 99.34 True fake: scaffold gap size wrong estimation (local) 20029941 20030764 59588 60411 NC_000014.9 velvet.14252 99.88 True fake: scaffold gap size wrong estimation (local) 20031043 20036637 60775 67091 NC_000014.9 velvet.14252 99.73 True relocation, scaffold gap is present, inconsistency = 15500 20057162 20068679 72116 84814 NC_000014.9 velvet.14252 99.39 True fake: scaffold gap size wrong estimation (local) 20068711 20071256 85667 88122 NC_000014.9 velvet.14252 96.4 True fake: scaffold gap size wrong estimation (local) 20079698 20082422 94511 97276 NC_000014.9 velvet.14252 96.66 True fake: scaffold gap size wrong estimation (local) 20086501 20087079 103346 103924 NC_000014.9 velvet.14252 100.0 True relocation, scaffold gap is present, inconsistency = -15188 20072130 20073625 104163 105658 NC_000014.9 velvet.14252 99.87 True fake: scaffold gap size wrong estimation (local) 20073909 20078325 106647 111063 NC_000014.9 velvet.14252 99.89 True fake: scaffold gap size wrong estimation (local) 20100201 20103733 134842 139317 NC_000014.9 velvet.14252 99.77 True fake: scaffold gap size wrong estimation (local) 20109809 20118487 140520 149198 NC_000014.9 velvet.14252 99.94 True fake: scaffold gap size wrong estimation (local) 20118791 20119645 150400 151254 NC_000014.9 velvet.14252 99.77 True relocation, scaffold gap is present, inconsistency = 50829627 70949283 70951382 153364 151265 NC_000014.9 velvet.14252 99.9 True local misassembly 70948353 70949032 154097 153418 NC_000014.9 velvet.14252 99.56 True relocation, scaffold gap is present, inconsistency = -77334 71021268 71025649 158570 154135 NC_000014.9 velvet.14252 97.79 True fake: scaffold gap size wrong estimation (local) 71012774 71019420 167929 161299 NC_000014.9 velvet.14252 99.67 True fake: scaffold gap size wrong estimation (local) 71008658 71012549 172901 169010 NC_000014.9 velvet.14252 99.97 True fake: scaffold gap size wrong estimation (local) 71005945 71008371 176438 173962 NC_000014.9 velvet.14252 97.82 True fake: scaffold gap size wrong estimation (local) 71003363 71005389 179760 177734 NC_000014.9 velvet.14252 99.9 True fake: scaffold gap size wrong estimation (local) 71001161 71003070 182740 180831 NC_000014.9 velvet.14252 99.95 True fake: scaffold gap size wrong estimation (local) 70993403 70996218 186738 183212 NC_000014.9 velvet.14252 99.86 True fake: scaffold gap size wrong estimation (local) 70991476 70992946 189093 187623 NC_000014.9 velvet.14252 100.0 True fake: scaffold gap size wrong estimation (local) 70990566 70991194 190171 189543 NC_000014.9 velvet.14252 99.84 True fake: scaffold gap size wrong estimation (local) 70985486 70989527 196071 191959 NC_000014.9 velvet.14252 100.0 True fake: scaffold gap size wrong estimation (local) 70984652 70985232 197393 196813 NC_000014.9 velvet.14252 99.83 True fake: scaffold gap size wrong estimation (local) 70983572 70984389 198443 197626 NC_000014.9 velvet.14252 100.0 True fake: scaffold gap size wrong estimation (local) 70979965 70983344 202716 199337 NC_000014.9 velvet.14252 99.94 True relocation, scaffold gap is present, inconsistency = -20981 70998753 71000527 204909 203135 NC_000014.9 velvet.14252 100.0 True fake: scaffold gap size wrong estimation (local) 70996241 70998566 208194 205869 NC_000014.9 velvet.14252 99.96 True fake: scaffold gap size wrong estimation (extensive) 70976643 70979947 220426 217122 NC_000014.9 velvet.14252 99.91 True fake: scaffold gap size wrong estimation (local) 70974406 70976341 223302 221387 NC_000014.9 velvet.14252 98.96 True fake: scaffold gap size wrong estimation (local) 70971419 70974028 227111 224191 NC_000014.9 velvet.14252 100.0 True fake: scaffold gap size wrong estimation (local) 70945792 70947376 248219 246635 NC_000014.9 velvet.14252 99.94 True fake: scaffold gap size wrong estimation (local) 70944981 70945557 249896 249320 NC_000014.9 velvet.14252 98.09 True fake: scaffold gap size wrong estimation (local) 70942066 70943017 252995 252047 NC_000014.9 velvet.14252 99.36 True relocation, scaffold gap is present, inconsistency = -29054 70970005 70971109 254084 253006 NC_000014.9 velvet.14252 97.63 True fake: scaffold gap size wrong estimation (local) 70965663 70969704 258989 254948 NC_000014.9 velvet.14252 99.98 True fake: scaffold gap size wrong estimation (local) 70964328 70965379 260915 259864 NC_000014.9 velvet.14252 100.0 True fake: scaffold gap size wrong estimation (local) 70961761 70964089 263944 261616 NC_000014.9 velvet.14252 99.83 True fake: scaffold gap size wrong estimation (local) 70935003 70936124 286886 285765 NC_000014.9 velvet.14252 99.91 True fake: scaffold gap size wrong estimation (local) 70932883 70934373 290111 288621 NC_000014.9 velvet.14252 99.93 True fake: scaffold gap size wrong estimation (local) 70927859 70931838 296573 292496 NC_000014.9 velvet.14252 99.92 True fake: scaffold gap size wrong estimation (local) 70925249 70927568 299942 297623 NC_000014.9 velvet.14252 100.0 True fake: scaffold gap size wrong estimation (local) 70924234 70924965 301908 301182 NC_000014.9 velvet.14252 99.32 True fake: scaffold gap size wrong estimation (local) 70923247 70923946 302779 302080 NC_000014.9 velvet.14252 100.0 True fake: not a misassembly (possible transposable element) 70914364 70917602 302790 306028 NC_000014.9 velvet.14252 99.94 True fake: not a misassembly (possible transposable element) 70918886 70922743 310207 306039 NC_000014.9 velvet.14252 99.97 True fake: scaffold gap size wrong estimation (local) 70917577 70918559 312071 311116 NC_000014.9 velvet.14252 97.02 True relocation, scaffold gap is present, inconsistency = 9820 70951592 70952997 335284 336689 NC_000014.9 velvet.14252 100.0 True fake: scaffold gap size wrong estimation (local) 70953957 70956318 338269 340630 NC_000014.9 velvet.14252 99.96 True fake: scaffold gap size wrong estimation (local) 70957081 70959232 341907 344106 NC_000014.9 velvet.14252 99.67 True CONTIG velvet.14252 347417 misassembled CONTIG velvet.14275 202 unaligned 44589970 44595802 5969 1 NC_000014.9 velvet.14288 99.91 True CONTIG velvet.14288 6713 correct 103859562 103860661 2172 3271 NC_000014.9 velvet.14298 100.0 True fake: scaffold gap size wrong estimation (local) 103861429 103862145 4949 5665 NC_000014.9 velvet.14298 100.0 True local misassembly 103862276 103862939 5666 6329 NC_000014.9 velvet.14298 98.49 True fake: scaffold gap size wrong estimation (local) 103863149 103863806 6810 7467 NC_000014.9 velvet.14298 100.0 True fake: scaffold gap size wrong estimation (local) 103865963 103866484 9487 10008 NC_000014.9 velvet.14298 99.81 True fake: scaffold gap size wrong estimation (local) 103867046 103869095 13352 15401 NC_000014.9 velvet.14298 99.95 True fake: scaffold gap size wrong estimation (local) 103869375 103871182 16634 18460 NC_000014.9 velvet.14298 97.77 True fake: scaffold gap size wrong estimation (local) 103871449 103872955 19318 20824 NC_000014.9 velvet.14298 99.93 True fake: scaffold gap size wrong estimation (local) 103874576 103875472 23287 24183 NC_000014.9 velvet.14298 100.0 True fake: scaffold gap size wrong estimation (extensive) 103889152 103892979 29399 33272 NC_000014.9 velvet.14298 99.84 True fake: scaffold gap size wrong estimation (local) 103893763 103895182 34667 36477 NC_000014.9 velvet.14298 99.64 True fake: scaffold gap size wrong estimation (local) 103896043 103900482 37454 44224 NC_000014.9 velvet.14298 99.5 True fake: scaffold gap size wrong estimation (local) 103900923 103901556 45576 46209 NC_000014.9 velvet.14298 100.0 True fake: scaffold gap size wrong estimation (local) 103908599 103909191 49941 50533 NC_000014.9 velvet.14298 98.31 True fake: scaffold gap size wrong estimation (local) 103911023 103913075 53144 55196 NC_000014.9 velvet.14298 100.0 True fake: scaffold gap size wrong estimation (local) 103919385 103919917 56185 56717 NC_000014.9 velvet.14298 99.62 True fake: scaffold gap size wrong estimation (local) 103920783 103922001 58137 59355 NC_000014.9 velvet.14298 100.0 True fake: scaffold gap size wrong estimation (local) 103923870 103924390 62110 62630 NC_000014.9 velvet.14298 98.08 True fake: scaffold gap size wrong estimation (local) 103955225 103955963 92577 93315 NC_000014.9 velvet.14298 99.86 True fake: scaffold gap size wrong estimation (local) 103956693 103958067 94429 95803 NC_000014.9 velvet.14298 99.93 True fake: scaffold gap size wrong estimation (local) 103958068 103959480 97358 98770 NC_000014.9 velvet.14298 97.81 True relocation, scaffold gap is present, inconsistency = -11189 103948302 103948832 98781 99311 NC_000014.9 velvet.14298 99.81 True local misassembly 103949041 103949714 99312 99985 NC_000014.9 velvet.14298 98.52 True fake: scaffold gap size wrong estimation (local) 103950385 103951784 101746 103145 NC_000014.9 velvet.14298 99.93 True fake: scaffold gap size wrong estimation (local) 103953044 103954687 105185 106828 NC_000014.9 velvet.14298 99.94 True fake: scaffold gap size wrong estimation (local) 103959528 103961327 110390 112189 NC_000014.9 velvet.14298 99.83 True fake: scaffold gap size wrong estimation (local) 103961622 103962760 113199 114337 NC_000014.9 velvet.14298 99.91 True fake: scaffold gap size wrong estimation (local) 103962997 103964207 114706 115916 NC_000014.9 velvet.14298 99.75 True relocation, scaffold gap is present, inconsistency = -59904 103904329 103905435 115942 117048 NC_000014.9 velvet.14298 100.0 True fake: scaffold gap size wrong estimation (local) 103905737 103906876 118563 119702 NC_000014.9 velvet.14298 100.0 True fake: scaffold gap size wrong estimation (local) 103909381 103910750 122791 124160 NC_000014.9 velvet.14298 100.0 True fake: scaffold gap size wrong estimation (local) 103913617 103914602 127309 128294 NC_000014.9 velvet.14298 100.0 True fake: scaffold gap size wrong estimation (local) 103915767 103918401 129981 133198 NC_000014.9 velvet.14298 97.61 True fake: scaffold gap size wrong estimation (local) 103926666 103928345 137270 138949 NC_000014.9 velvet.14298 99.82 True fake: scaffold gap size wrong estimation (local) 103928958 103929636 140643 141321 NC_000014.9 velvet.14298 100.0 True fake: scaffold gap size wrong estimation (local) 103931332 103932422 143675 144765 NC_000014.9 velvet.14298 100.0 True fake: scaffold gap size wrong estimation (local) 103932678 103933622 145184 146128 NC_000014.9 velvet.14298 100.0 True fake: scaffold gap size wrong estimation (local) 103934769 103938403 148038 151725 NC_000014.9 velvet.14298 98.16 True fake: scaffold gap size wrong estimation (local) 103938739 103939700 152576 153537 NC_000014.9 velvet.14298 99.9 True fake: scaffold gap size wrong estimation (local) 103939832 103942970 154220 157358 NC_000014.9 velvet.14298 99.94 True fake: scaffold gap size wrong estimation (local) 103943613 103944592 158794 159773 NC_000014.9 velvet.14298 96.63 True fake: scaffold gap size wrong estimation (local) 103944867 103945979 160111 161223 NC_000014.9 velvet.14298 99.73 True fake: scaffold gap size wrong estimation (local) 103947630 103948210 163694 164252 NC_000014.9 velvet.14298 96.15 True fake: scaffold gap size wrong estimation (extensive) 103966308 103967285 173887 174864 NC_000014.9 velvet.14298 98.98 True fake: scaffold gap size wrong estimation (local) 103967512 103968532 175509 176529 NC_000014.9 velvet.14298 100.0 True fake: scaffold gap size wrong estimation (local) 103969199 103971001 177921 179723 NC_000014.9 velvet.14298 100.0 True fake: scaffold gap size wrong estimation (local) 103974077 103974696 185044 185663 NC_000014.9 velvet.14298 99.84 True local misassembly 103972337 103973943 185674 187280 NC_000014.9 velvet.14298 99.88 True fake: not a misassembly (possible transposable element) 103981180 103982620 191358 189962 NC_000014.9 velvet.14298 96.81 True fake: not a misassembly (possible transposable element) 103977662 103978332 191369 192036 NC_000014.9 velvet.14298 99.4 True fake: scaffold gap size wrong estimation (local) 103984439 103985076 192110 192747 NC_000014.9 velvet.14298 99.53 True local misassembly 103978368 103979418 192758 193808 NC_000014.9 velvet.14298 98.95 True CONTIG velvet.14298 195230 misassembled CONTIG velvet.14305 209 unaligned 32138545 32140082 1538 1 NC_000014.9 velvet.14329 99.35 True fake: scaffold gap size wrong estimation (local) 32134110 32137690 7630 3145 NC_000014.9 velvet.14329 100.0 True fake: scaffold gap size wrong estimation (local) 32130805 32131551 11314 10570 NC_000014.9 velvet.14329 99.73 True fake: scaffold gap size wrong estimation (local) 32128225 32129638 14793 13380 NC_000014.9 velvet.14329 99.86 True fake: scaffold gap size wrong estimation (local) 32121131 32126951 22637 16808 NC_000014.9 velvet.14329 100.0 True fake: scaffold gap size wrong estimation (extensive) 32118485 32121002 34195 31688 NC_000014.9 velvet.14329 99.56 True fake: scaffold gap size wrong estimation (local) 32116570 32118222 36967 35315 NC_000014.9 velvet.14329 100.0 True fake: scaffold gap size wrong estimation (local) 32114229 32115379 40019 38869 NC_000014.9 velvet.14329 100.0 True fake: scaffold gap size wrong estimation (local) 32112872 32113944 41306 40234 NC_000014.9 velvet.14329 100.0 True fake: scaffold gap size wrong estimation (local) 32112092 32112594 42943 42441 NC_000014.9 velvet.14329 100.0 True fake: scaffold gap size wrong estimation (local) 32110212 32111829 44823 43198 NC_000014.9 velvet.14329 100.0 True relocation, scaffold gap is present, inconsistency = 8067000 24042406 24043201 45629 44834 NC_000014.9 velvet.14329 100.0 True fake: scaffold gap size wrong estimation (local) 24040392 24041031 48868 48229 NC_000014.9 velvet.14329 99.69 True fake: scaffold gap size wrong estimation (local) 24037513 24038254 52437 51696 NC_000014.9 velvet.14329 100.0 True relocation, scaffold gap is present, inconsistency = -8064134 32095686 32101636 58381 52448 NC_000014.9 velvet.14329 99.71 True fake: scaffold gap size wrong estimation (local) 32082812 32095384 72451 59464 NC_000014.9 velvet.14329 99.75 True fake: scaffold gap size wrong estimation (local) 32081549 32082553 74255 73251 NC_000014.9 velvet.14329 100.0 True fake: scaffold gap size wrong estimation (local) 32077347 32081424 78996 74919 NC_000014.9 velvet.14329 99.98 True fake: scaffold gap size wrong estimation (local) 32071156 32077100 85982 80038 NC_000014.9 velvet.14329 99.97 True fake: scaffold gap size wrong estimation (local) 32043323 32046055 110926 108194 NC_000014.9 velvet.14329 100.0 True fake: scaffold gap size wrong estimation (local) 32036224 32039923 115633 111479 NC_000014.9 velvet.14329 99.97 True local misassembly 32040165 32043208 118687 115644 NC_000014.9 velvet.14329 99.97 True fake: scaffold gap size wrong estimation (local) 32017513 32021194 136921 133240 NC_000014.9 velvet.14329 99.84 True fake: scaffold gap size wrong estimation (local) 31983919 31988067 169167 164900 NC_000014.9 velvet.14329 99.76 True CONTIG velvet.14329 169167 misassembled CONTIG velvet.14363 218 unaligned 106497030 106498077 1048 1 NC_000014.9 velvet.14370 99.81 True CONTIG velvet.14370 1048 correct CONTIG velvet.14372 366 unaligned CONTIG velvet.14378 325 unaligned CONTIG velvet.14393 320 unaligned CONTIG velvet.14401 234 unaligned CONTIG velvet.14418 221 unaligned 105573933 105575324 1 1392 NC_000014.9 velvet.14425 99.78 True CONTIG velvet.14425 1392 correct CONTIG velvet.14435 202 unaligned 19356319 19357076 758 1 NC_000014.9 velvet.14439 99.87 True CONTIG velvet.14439 758 correct CONTIG velvet.14469 316 unaligned 99583810 99584825 1127 112 NC_000014.9 velvet.14472 100.0 True fake: scaffold gap size wrong estimation (local) 99580837 99582532 4545 2850 NC_000014.9 velvet.14472 99.82 True fake: scaffold gap size wrong estimation (local) 99578317 99580582 7885 5620 NC_000014.9 velvet.14472 99.82 True local misassembly 99569886 99577678 15678 7886 NC_000014.9 velvet.14472 99.92 True indel: indel (> 5bp) 99568240 99569885 17350 15705 NC_000014.9 velvet.14472 96.23 True fake: scaffold gap size wrong estimation (local) 99558569 99567549 27847 18879 NC_000014.9 velvet.14472 99.79 True fake: scaffold gap size wrong estimation (local) 99546967 99547482 34925 34410 NC_000014.9 velvet.14472 100.0 True fake: scaffold gap size wrong estimation (local) 99540085 99546885 42612 35784 NC_000014.9 velvet.14472 99.55 True fake: scaffold gap size wrong estimation (local) 99534262 99539208 49365 44419 NC_000014.9 velvet.14472 99.94 True fake: scaffold gap size wrong estimation (local) 99533052 99534071 50469 49450 NC_000014.9 velvet.14472 100.0 True fake: scaffold gap size wrong estimation (local) 99531596 99532764 52353 51185 NC_000014.9 velvet.14472 100.0 True relocation, scaffold gap is present, inconsistency = -21792 99547779 99553357 57868 52384 NC_000014.9 velvet.14472 98.28 True fake: scaffold gap size wrong estimation (local) 99519378 99526558 84829 77824 NC_000014.9 velvet.14472 96.98 True relocation, scaffold gap is present, inconsistency = 26483 99553665 99556164 85453 87952 NC_000014.9 velvet.14472 100.0 True fake: scaffold gap size wrong estimation (local) 99556792 99557674 88738 89620 NC_000014.9 velvet.14472 100.0 True fake: scaffold gap size wrong estimation (local) 99591980 99595309 118372 121701 NC_000014.9 velvet.14472 99.88 True inversion, scaffold gap is present 99585063 99591720 128369 121712 NC_000014.9 velvet.14472 99.8 True CONTIG velvet.14472 128369 misassembled CONTIG velvet.14487 207 unaligned CONTIG velvet.14489 219 unaligned CONTIG velvet.14493 250 unaligned 18700171 18700887 716 1 NC_000014.9 velvet.14503 98.74 True CONTIG velvet.14503 716 correct 70123723 70126565 1 2843 NC_000014.9 velvet.14509 99.89 True CONTIG velvet.14509 2843 correct CONTIG velvet.14513 205 unaligned 63795655 63796222 1 568 NC_000014.9 velvet.14521 100.0 True CONTIG velvet.14521 568 correct 37128852 37129688 837 1 NC_000014.9 velvet.14544 99.88 True CONTIG velvet.14544 837 correct CONTIG velvet.14547 380 unaligned CONTIG velvet.14590 336 unaligned CONTIG velvet.14592 289 unaligned CONTIG velvet.14617 223 unaligned CONTIG velvet.14631 380 unaligned CONTIG velvet.14642 3596 unaligned CONTIG velvet.14650 230 unaligned CONTIG velvet.14651 263 unaligned CONTIG velvet.14664 298 unaligned CONTIG velvet.14672 346 unaligned CONTIG velvet.14689 261 unaligned CONTIG velvet.14692 321 unaligned 19288886 19289662 777 1 NC_000014.9 velvet.14704 99.87 True CONTIG velvet.14704 777 correct CONTIG velvet.14727 273 unaligned CONTIG velvet.14732 1027 unaligned CONTIG velvet.14751 207 unaligned 102125295 102126555 168 1428 NC_000014.9 velvet.14764 100.0 True fake: scaffold gap size wrong estimation (local) 102130269 102130823 1741 2295 NC_000014.9 velvet.14764 99.82 True fake: scaffold gap size wrong estimation (local) 102131021 102132045 2638 3662 NC_000014.9 velvet.14764 100.0 True relocation, scaffold gap is present, inconsistency = 147334 102281719 102282590 6002 6873 NC_000014.9 velvet.14764 99.54 True fake: scaffold gap size wrong estimation (local) 102285107 102285651 8761 9305 NC_000014.9 velvet.14764 99.63 True fake: scaffold gap size wrong estimation (local) 102288170 102288925 13128 13883 NC_000014.9 velvet.14764 98.68 True fake: scaffold gap size wrong estimation (local) 102290451 102291705 16023 17277 NC_000014.9 velvet.14764 100.0 True fake: scaffold gap size wrong estimation (local) 102294478 102295990 22258 23770 NC_000014.9 velvet.14764 100.0 True relocation, scaffold gap is present, inconsistency = -18091 102282881 102284811 28752 30655 NC_000014.9 velvet.14764 98.57 True relocation, scaffold gap is present, inconsistency = -66357034 35955593 35958484 58471 61362 NC_000014.9 velvet.14764 99.93 True fake: scaffold gap size wrong estimation (local) 35958576 35960663 61520 63607 NC_000014.9 velvet.14764 100.0 True fake: scaffold gap size wrong estimation (local) 35960927 35968062 64456 72614 NC_000014.9 velvet.14764 98.1 True fake: scaffold gap size wrong estimation (local) 35968489 35970393 73834 75738 NC_000014.9 velvet.14764 100.0 True relocation, scaffold gap is present, inconsistency = 66333362 102325786 102327224 97769 99207 NC_000014.9 velvet.14764 100.0 True fake: scaffold gap size wrong estimation (local) 102327420 102328102 100728 101410 NC_000014.9 velvet.14764 100.0 True local misassembly 102328421 102328986 101411 101976 NC_000014.9 velvet.14764 98.23 True fake: scaffold gap size wrong estimation (local) 102337465 102338285 107049 107869 NC_000014.9 velvet.14764 100.0 True fake: scaffold gap size wrong estimation (local) 102338572 102339491 108510 109429 NC_000014.9 velvet.14764 100.0 True fake: scaffold gap size wrong estimation (local) 102341102 102342747 111804 113449 NC_000014.9 velvet.14764 99.88 True relocation, scaffold gap is present, inconsistency = -11798 102331463 102332309 113963 114809 NC_000014.9 velvet.14764 100.0 True fake: scaffold gap size wrong estimation (local) 102332924 102335972 116317 119945 NC_000014.9 velvet.14764 99.9 True fake: not a misassembly (possible transposable element) 76968355 76969195 123330 122490 NC_000014.9 velvet.14764 98.45 True fake: not a misassembly (possible transposable element) 102343687 102345895 123657 125936 NC_000014.9 velvet.14764 98.63 True fake: scaffold gap size wrong estimation (local) 102346639 102347335 127458 128120 NC_000014.9 velvet.14764 95.05 True fake: scaffold gap size wrong estimation (local) 102348450 102349015 129773 130338 NC_000014.9 velvet.14764 99.82 True fake: scaffold gap size wrong estimation (local) 102349262 102350395 130643 131776 NC_000014.9 velvet.14764 100.0 True fake: scaffold gap size wrong estimation (local) 102351098 102351897 133317 134116 NC_000014.9 velvet.14764 99.88 True fake: scaffold gap size wrong estimation (local) 102352160 102352776 134371 134987 NC_000014.9 velvet.14764 100.0 True fake: not a misassembly (possible transposable element) 76503619 76504553 134998 135932 NC_000014.9 velvet.14764 99.89 True fake: not a misassembly (possible transposable element) 102353983 102354510 137374 137901 NC_000014.9 velvet.14764 99.81 True fake: scaffold gap size wrong estimation (local) 102355550 102357067 141034 142551 NC_000014.9 velvet.14764 99.93 True fake: scaffold gap size wrong estimation (extensive) 102366648 102368009 142562 143923 NC_000014.9 velvet.14764 100.0 True fake: scaffold gap size wrong estimation (local) 102368543 102369442 144172 145071 NC_000014.9 velvet.14764 99.67 True fake: not a misassembly (possible transposable element) 76550329 76551786 163912 165369 NC_000014.9 velvet.14764 100.0 True fake: not a misassembly (possible transposable element) 102386484 102387543 168542 169601 NC_000014.9 velvet.14764 99.81 True local misassembly 102387818 102388441 169602 170225 NC_000014.9 velvet.14764 98.24 True fake: scaffold gap size wrong estimation (local) 102389322 102390822 172184 173684 NC_000014.9 velvet.14764 100.0 True fake: scaffold gap size wrong estimation (local) 102394615 102395544 174192 175121 NC_000014.9 velvet.14764 98.92 True local misassembly 102391351 102391998 175411 176058 NC_000014.9 velvet.14764 98.46 True local misassembly 102392286 102393584 176059 177357 NC_000014.9 velvet.14764 99.23 True fake: scaffold gap size wrong estimation (local) 102396392 102397523 177906 179037 NC_000014.9 velvet.14764 98.85 True fake: scaffold gap size wrong estimation (local) 102398113 102398616 179509 180012 NC_000014.9 velvet.14764 100.0 True relocation, scaffold gap is present, inconsistency = -31589 102370348 102372030 183333 185015 NC_000014.9 velvet.14764 100.0 True fake: scaffold gap size wrong estimation (local) 102372902 102373828 186733 187659 NC_000014.9 velvet.14764 100.0 True fake: scaffold gap size wrong estimation (local) 102377717 102378666 190069 191018 NC_000014.9 velvet.14764 100.0 True local misassembly 102374103 102377380 191029 194301 NC_000014.9 velvet.14764 99.85 True fake: scaffold gap size wrong estimation (local) 102385147 102385683 201327 201863 NC_000014.9 velvet.14764 100.0 True relocation, scaffold gap is present, inconsistency = -66416584 35970951 35971492 203715 204256 NC_000014.9 velvet.14764 100.0 True fake: scaffold gap size wrong estimation (local) 35973726 35976151 207205 209674 NC_000014.9 velvet.14764 100.0 True fake: scaffold gap size wrong estimation (local) 35979171 35980528 209685 211042 NC_000014.9 velvet.14764 100.0 True fake: scaffold gap size wrong estimation (local) 35982549 35983794 213621 214866 NC_000014.9 velvet.14764 100.0 True fake: scaffold gap size wrong estimation (local) 36011071 36011677 236925 237531 NC_000014.9 velvet.14764 99.84 True relocation, scaffold gap is present, inconsistency = -8836 36002852 36011051 237542 245497 NC_000014.9 velvet.14764 97.02 True fake: scaffold gap size wrong estimation (local) 36013811 36015336 246149 247674 NC_000014.9 velvet.14764 100.0 True local misassembly 36012226 36013807 247685 249266 NC_000014.9 velvet.14764 100.0 True fake: scaffold gap size wrong estimation (local) 36015341 36024765 251556 260980 NC_000014.9 velvet.14764 99.99 True fake: scaffold gap size wrong estimation (local) 36024898 36025964 261763 262829 NC_000014.9 velvet.14764 99.91 True fake: scaffold gap size wrong estimation (local) 36026929 36030434 264464 268027 NC_000014.9 velvet.14764 100.0 True fake: scaffold gap size wrong estimation (local) 36031392 36032858 269793 271259 NC_000014.9 velvet.14764 100.0 True fake: scaffold gap size wrong estimation (local) 36033098 36034281 272032 273261 NC_000014.9 velvet.14764 100.0 True fake: scaffold gap size wrong estimation (local) 36034558 36036371 273737 275550 NC_000014.9 velvet.14764 100.0 True fake: scaffold gap size wrong estimation (local) 36036372 36037158 280865 281651 NC_000014.9 velvet.14764 99.62 True indel: indel (> 5bp) 36037184 36039964 281652 284432 NC_000014.9 velvet.14764 99.64 True fake: scaffold gap size wrong estimation (local) 36045887 36047676 284633 286422 NC_000014.9 velvet.14764 100.0 True fake: not a misassembly (possible transposable element) 95109474 95111758 289341 287057 NC_000014.9 velvet.14764 100.0 True fake: not a misassembly (possible transposable element) 36057584 36061420 292845 296681 NC_000014.9 velvet.14764 100.0 True relocation, scaffold gap is present, inconsistency = -12203 36050440 36057564 297904 305025 NC_000014.9 velvet.14764 99.93 True fake: scaffold gap size wrong estimation (local) 36061659 36072125 305036 315604 NC_000014.9 velvet.14764 99.99 True fake: scaffold gap size wrong estimation (local) 36072773 36077719 317064 322004 NC_000014.9 velvet.14764 99.82 True fake: scaffold gap size wrong estimation (local) 36078050 36080248 323161 325438 NC_000014.9 velvet.14764 98.5 True fake: scaffold gap size wrong estimation (local) 36080513 36082781 326399 328645 NC_000014.9 velvet.14764 96.73 True fake: not a misassembly (possible transposable element) 36102449 36104333 328657 330541 NC_000014.9 velvet.14764 99.79 True fake: not a misassembly (possible transposable element) 36083677 36084951 330552 331843 NC_000014.9 velvet.14764 97.16 True fake: scaffold gap size wrong estimation (local) 36085201 36090002 332847 337643 NC_000014.9 velvet.14764 99.69 True fake: scaffold gap size wrong estimation (local) 36090326 36092776 338798 341249 NC_000014.9 velvet.14764 99.92 True fake: scaffold gap size wrong estimation (local) 36093081 36096644 342412 345975 NC_000014.9 velvet.14764 99.75 True fake: scaffold gap size wrong estimation (local) 36099779 36100940 345986 347148 NC_000014.9 velvet.14764 99.74 True fake: scaffold gap size wrong estimation (local) 36101219 36102425 348097 349303 NC_000014.9 velvet.14764 99.67 True fake: scaffold gap size wrong estimation (local) 36124554 36125355 371493 372294 NC_000014.9 velvet.14764 99.88 True relocation, scaffold gap is present, inconsistency = -17902 36107464 36109059 372305 373900 NC_000014.9 velvet.14764 99.81 True relocation, scaffold gap is present, inconsistency = -10646 36098534 36099124 374021 374654 NC_000014.9 velvet.14764 99.65 True relocation, scaffold gap is present, inconsistency = 50110604 86217753 86224668 382679 389767 NC_000014.9 velvet.14764 99.87 True relocation, scaffold gap is present, inconsistency = -50120025 36104654 36107443 389778 392566 NC_000014.9 velvet.14764 99.82 True relocation, scaffold gap is present, inconsistency = 15744 36125474 36131096 394853 401189 NC_000014.9 velvet.14764 98.93 True fake: scaffold gap size wrong estimation (local) 36136331 36138887 401200 403757 NC_000014.9 velvet.14764 99.8 True relocation, scaffold gap is present, inconsistency = 50092807 86234244 86235855 407922 406307 NC_000014.9 velvet.14764 99.69 True inversion, scaffold gap is present 86243754 86244607 409467 410320 NC_000014.9 velvet.14764 99.88 True relocation, scaffold gap is present, inconsistency = -55686652 30558217 30562575 410582 414941 NC_000014.9 velvet.14764 99.86 True relocation, scaffold gap is present, inconsistency = 31957151 62527494 62535879 422709 431101 NC_000014.9 velvet.14764 99.82 True relocation, scaffold gap is present, inconsistency = 23695022 86230912 86232610 432810 431112 NC_000014.9 velvet.14764 99.88 True fake: scaffold gap size wrong estimation (local) 86228408 86230162 436153 434408 NC_000014.9 velvet.14764 99.08 True relocation, scaffold gap is present, inconsistency = 16748 86247361 86255184 436604 445285 NC_000014.9 velvet.14764 99.74 True relocation, scaffold gap is present, inconsistency = 17626 86225763 86228203 449259 446817 NC_000014.9 velvet.14764 99.84 True fake: scaffold gap size wrong estimation (local) 86197902 86198406 478044 477540 NC_000014.9 velvet.14764 100.0 True relocation, scaffold gap is present, inconsistency = -10534 86201456 86208096 485138 478384 NC_000014.9 velvet.14764 98.46 True fake: scaffold gap size wrong estimation (local) 86192060 86197732 497427 490577 NC_000014.9 velvet.14764 96.38 True fake: scaffold gap size wrong estimation (local) 86183713 86185893 503336 500872 NC_000014.9 velvet.14764 99.95 True relocation, scaffold gap is present, inconsistency = -9589 86189153 86192021 507482 504617 NC_000014.9 velvet.14764 99.9 True relocation, scaffold gap is present, inconsistency = 61645484 24541750 24542655 508496 509401 NC_000014.9 velvet.14764 99.89 True fake: scaffold gap size wrong estimation (local) 24544025 24544761 510816 511552 NC_000014.9 velvet.14764 99.86 True relocation, scaffold gap is present, inconsistency = 61633883 86178954 86179920 512828 511862 NC_000014.9 velvet.14764 98.86 True local misassembly 86177169 86178950 514992 513211 NC_000014.9 velvet.14764 98.71 True fake: scaffold gap size wrong estimation (local) 86175645 86176711 517322 516256 NC_000014.9 velvet.14764 99.91 True indel: indel (> 5bp) 86174806 86175608 518191 517389 NC_000014.9 velvet.14764 98.88 True relocation, scaffold gap is present, inconsistency = 40059964 46113621 46114667 519459 518366 NC_000014.9 velvet.14764 99.69 True relocation, scaffold gap is present, inconsistency = 25033080 71150227 71152167 521939 523921 NC_000014.9 velvet.14764 99.25 True fake: scaffold gap size wrong estimation (local) 71154876 71156085 527171 528380 NC_000014.9 velvet.14764 99.83 True relocation, scaffold gap is present, inconsistency = 25058076 46084837 46086034 540333 539146 NC_000014.9 velvet.14764 99.17 True fake: scaffold gap size wrong estimation (local) 46079829 46084701 545932 540823 NC_000014.9 velvet.14764 99.71 True fake: scaffold gap size wrong estimation (local) 46075741 46079593 551230 546850 NC_000014.9 velvet.14764 99.9 True fake: scaffold gap size wrong estimation (local) 46073875 46075651 553695 551919 NC_000014.9 velvet.14764 100.0 True fake: scaffold gap size wrong estimation (local) 46047248 46056831 575502 565812 NC_000014.9 velvet.14764 99.6 True fake: scaffold gap size wrong estimation (local) 46036497 46047088 586470 575791 NC_000014.9 velvet.14764 99.89 True CONTIG velvet.14764 587483 misassembled CONTIG velvet.14793 389 unaligned CONTIG velvet.14799 245 unaligned 67853375 67853900 1 526 NC_000014.9 velvet.14803 100.0 True CONTIG velvet.14803 526 correct CONTIG velvet.14804 214 unaligned 21359357 21360096 740 1 NC_000014.9 velvet.14820 100.0 True fake: scaffold gap size wrong estimation (local) 21328171 21328839 28710 28042 NC_000014.9 velvet.14820 100.0 True fake: scaffold gap size wrong estimation (local) 21326639 21327889 30169 28919 NC_000014.9 velvet.14820 100.0 True CONTIG velvet.14820 30169 correct 64685310 64686780 1 1471 NC_000014.9 velvet.14834 99.93 True CONTIG velvet.14834 1471 correct CONTIG velvet.14853 401 unaligned CONTIG velvet.14854 430 unaligned CONTIG velvet.14886 244 unaligned CONTIG velvet.14899 300 unaligned 35262856 35263432 1 577 NC_000014.9 velvet.14913 100.0 True CONTIG velvet.14913 577 correct 105695506 105696384 1 879 NC_000014.9 velvet.14918 99.77 True CONTIG velvet.14918 879 correct CONTIG velvet.14921 918 unaligned CONTIG velvet.14926 3585 unaligned CONTIG velvet.14943 243 unaligned CONTIG velvet.14947 294 unaligned CONTIG velvet.14958 348 unaligned CONTIG velvet.14966 205 unaligned 22960634 22961148 3902 3388 NC_000014.9 velvet.14995 100.0 True CONTIG velvet.14995 3902 correct 96337773 96338295 1 528 NC_000014.9 velvet.15005 100.0 True CONTIG velvet.15005 547 correct 19660058 19660893 836 1 NC_000014.9 velvet.15008 99.88 True CONTIG velvet.15008 836 correct CONTIG velvet.15013 213 unaligned CONTIG velvet.15015 207 unaligned 18934639 18935283 645 1 NC_000014.9 velvet.15033 100.0 True CONTIG velvet.15033 645 correct 69600082 69601184 3295 4397 NC_000014.9 velvet.15064 100.0 True local misassembly 69601476 69602198 4398 5120 NC_000014.9 velvet.15064 98.62 True CONTIG velvet.15064 5120 correct CONTIG velvet.15102 210 unaligned 18324585 18325854 1 1270 NC_000014.9 velvet.15128 100.0 True CONTIG velvet.15128 1270 correct CONTIG velvet.15133 443 unaligned CONTIG velvet.15138 370 unaligned CONTIG velvet.15156 221 unaligned CONTIG velvet.15186 246 unaligned CONTIG velvet.15192 209 unaligned CONTIG velvet.15206 430 unaligned CONTIG velvet.15208 208 unaligned CONTIG velvet.15232 278 unaligned 75103194 75104180 1 987 NC_000014.9 velvet.15234 99.9 True fake: scaffold gap size wrong estimation (local) 75104777 75105320 1179 1722 NC_000014.9 velvet.15234 100.0 True fake: scaffold gap size wrong estimation (local) 75105342 75106104 3062 3824 NC_000014.9 velvet.15234 99.87 True local misassembly 75106383 75107595 3825 5037 NC_000014.9 velvet.15234 99.01 True fake: scaffold gap size wrong estimation (local) 75108798 75111642 7050 9894 NC_000014.9 velvet.15234 100.0 True CONTIG velvet.15234 9894 correct 21143570 21144381 806 1 NC_000014.9 velvet.15235 99.26 True CONTIG velvet.15235 4229 correct CONTIG velvet.15241 209 unaligned 81120161 81121159 999 1 NC_000014.9 velvet.15254 99.9 True CONTIG velvet.15254 999 correct 20954097 20954597 501 1 NC_000014.9 velvet.15259 99.4 True CONTIG velvet.15259 501 correct CONTIG velvet.15272 219 unaligned CONTIG velvet.15286 238 unaligned CONTIG velvet.15299 247 unaligned CONTIG velvet.15312 234 unaligned CONTIG velvet.15313 386 unaligned CONTIG velvet.15314 318 unaligned CONTIG velvet.15320 286 unaligned CONTIG velvet.15353 324 unaligned CONTIG velvet.15356 529 unaligned CONTIG velvet.15373 284 unaligned 45277241 45278045 4022 3218 NC_000014.9 velvet.15392 100.0 True local misassembly 45278121 45279656 5769 4235 NC_000014.9 velvet.15392 99.67 True fake: scaffold gap size wrong estimation (local) 45276052 45276955 11089 10186 NC_000014.9 velvet.15392 100.0 True fake: scaffold gap size wrong estimation (local) 45273978 45275590 13164 11552 NC_000014.9 velvet.15392 100.0 True relocation, scaffold gap is present, inconsistency = -9112 45281688 45282348 14568 13906 NC_000014.9 velvet.15392 98.79 True CONTIG velvet.15392 15794 misassembled CONTIG velvet.15487 221 unaligned 18962710 18963411 702 1 NC_000014.9 velvet.15497 99.86 True CONTIG velvet.15497 702 correct CONTIG velvet.15504 217 unaligned 18953130 18953639 510 1 NC_000014.9 velvet.15505 99.8 True CONTIG velvet.15505 510 correct 106525770 106526854 1 1084 NC_000014.9 velvet.15512 99.82 True CONTIG velvet.15512 1084 correct 19246751 19247814 1064 1 NC_000014.9 velvet.15520 99.44 True CONTIG velvet.15520 1064 correct CONTIG velvet.15534 327 unaligned CONTIG velvet.15546 214 unaligned CONTIG velvet.15547 241 unaligned CONTIG velvet.15560 441 unaligned 34904662 34905501 4344 3505 NC_000014.9 velvet.15574 100.0 True CONTIG velvet.15574 33248 correct CONTIG velvet.15601 519 unaligned CONTIG velvet.15611 239 unaligned CONTIG velvet.15647 307 unaligned 18320420 18321932 1 1513 NC_000014.9 velvet.15648 100.0 True CONTIG velvet.15648 1513 correct 73580343 73581004 662 1 NC_000014.9 velvet.15659 99.7 True CONTIG velvet.15659 662 correct 19335753 19336375 623 1 NC_000014.9 velvet.15677 99.84 True CONTIG velvet.15677 623 correct CONTIG velvet.15680 225 unaligned 49278568 49279556 1 989 NC_000014.9 velvet.15684 100.0 True CONTIG velvet.15684 989 correct 60670257 60671383 1 1127 NC_000014.9 velvet.15687 100.0 True CONTIG velvet.15687 30323 correct CONTIG velvet.15698 242 unaligned CONTIG velvet.15704 293 unaligned CONTIG velvet.15738 283 unaligned CONTIG velvet.15759 233 unaligned CONTIG velvet.15791 275 unaligned CONTIG velvet.15796 245 unaligned 41483501 41486573 3202 1 NC_000014.9 velvet.15803 99.87 True CONTIG velvet.15803 3202 correct CONTIG velvet.15814 412 unaligned 47477115 47478551 3034 1598 NC_000014.9 velvet.15822 99.3 True local misassembly 47475864 47476878 4049 3035 NC_000014.9 velvet.15822 99.61 True fake: scaffold gap size wrong estimation (local) 47474808 47475702 6417 5490 NC_000014.9 velvet.15822 95.51 True CONTIG velvet.15822 7310 correct 37222388 37223046 4378 3720 NC_000014.9 velvet.15854 100.0 True CONTIG velvet.15854 4443 correct_unaligned CONTIG velvet.15868 253 unaligned CONTIG velvet.15879 381 unaligned 73203391 73203950 4501 5060 NC_000014.9 velvet.15881 100.0 True fake: scaffold gap size wrong estimation (local) 73205510 73212115 7148 13753 NC_000014.9 velvet.15881 100.0 True fake: scaffold gap size wrong estimation (local) 73212410 73214297 14793 16680 NC_000014.9 velvet.15881 100.0 True fake: scaffold gap size wrong estimation (local) 73215540 73216514 18538 19512 NC_000014.9 velvet.15881 100.0 True fake: scaffold gap size wrong estimation (local) 73216669 73217812 19844 21017 NC_000014.9 velvet.15881 100.0 True CONTIG velvet.15881 21699 correct CONTIG velvet.15895 244 unaligned CONTIG velvet.15901 295 unaligned 69379210 69380109 1 900 NC_000014.9 velvet.15917 100.0 True CONTIG velvet.15917 900 correct CONTIG velvet.15926 250 unaligned CONTIG velvet.15937 253 unaligned 64709740 64710415 1 676 NC_000014.9 velvet.15947 99.85 True CONTIG velvet.15947 676 correct CONTIG velvet.15958 223 unaligned CONTIG velvet.15984 210 unaligned CONTIG velvet.16003 241 unaligned 63864761 63865518 1 758 NC_000014.9 velvet.16017 99.74 True CONTIG velvet.16017 758 correct CONTIG velvet.16022 491 unaligned CONTIG velvet.16050 229 unaligned CONTIG velvet.16090 232 unaligned CONTIG velvet.16113 232 unaligned CONTIG velvet.16126 224 unaligned CONTIG velvet.16175 283 unaligned 23040161 23040694 1 534 NC_000014.9 velvet.16179 100.0 True CONTIG velvet.16179 534 correct CONTIG velvet.16181 276 unaligned CONTIG velvet.16209 319 unaligned 81655257 81657549 2494 290 NC_000014.9 velvet.16217 96.1 True fake: scaffold gap size wrong estimation (local) 81653262 81655154 5245 3353 NC_000014.9 velvet.16217 99.95 True indel: indel (> 5bp) 81649938 81653217 9288 5306 NC_000014.9 velvet.16217 99.94 True fake: scaffold gap size wrong estimation (local) 81649115 81649622 11915 11408 NC_000014.9 velvet.16217 99.8 True fake: scaffold gap size wrong estimation (local) 81646217 81648794 14662 12085 NC_000014.9 velvet.16217 99.88 True relocation, scaffold gap is present, inconsistency = 36065774 45578338 45580432 16772 14673 NC_000014.9 velvet.16217 99.95 True relocation, scaffold gap is present, inconsistency = -36039509 81613571 81614238 21048 20381 NC_000014.9 velvet.16217 100.0 True local misassembly 81614569 81615290 21779 21059 NC_000014.9 velvet.16217 99.31 True fake: scaffold gap size wrong estimation (local) 81612547 81613165 24651 24033 NC_000014.9 velvet.16217 98.38 True local misassembly 81611827 81612421 25246 24652 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 81608781 81609639 28933 28075 NC_000014.9 velvet.16217 99.88 True fake: scaffold gap size wrong estimation (local) 81604795 81608533 33520 29782 NC_000014.9 velvet.16217 99.92 True relocation, scaffold gap is present, inconsistency = 29816369 51781308 51788415 33531 40648 NC_000014.9 velvet.16217 99.75 True relocation, scaffold gap is present, inconsistency = 29802219 81590645 81592978 42992 40659 NC_000014.9 velvet.16217 99.83 True relocation, scaffold gap is present, inconsistency = -3346590 84936112 84936866 44115 43361 NC_000014.9 velvet.16217 99.6 True relocation, scaffold gap is present, inconsistency = 21804 84911534 84913914 46889 44509 NC_000014.9 velvet.16217 99.96 True fake: scaffold gap size wrong estimation (local) 84909292 84909905 49892 49279 NC_000014.9 velvet.16217 99.84 True relocation, scaffold gap is present, inconsistency = 33133481 51774703 51775800 49903 51000 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 51776110 51779141 52128 55154 NC_000014.9 velvet.16217 99.8 True relocation, scaffold gap is present, inconsistency = 33130963 84910115 84911502 56552 55165 NC_000014.9 velvet.16217 99.93 True relocation, scaffold gap is present, inconsistency = 3311566 81582233 81586114 72842 68987 NC_000014.9 velvet.16217 98.7 True fake: scaffold gap size wrong estimation (local) 81579042 81581458 76895 74492 NC_000014.9 velvet.16217 99.09 True fake: scaffold gap size wrong estimation (local) 81572540 81578795 84211 77872 NC_000014.9 velvet.16217 98.58 True fake: scaffold gap size wrong estimation (local) 81570155 81572245 87263 85173 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 81567208 81569907 90929 88230 NC_000014.9 velvet.16217 100.0 True relocation, scaffold gap is present, inconsistency = 29693228 51854817 51855939 108970 110092 NC_000014.9 velvet.16217 99.91 True relocation, scaffold gap is present, inconsistency = 24715027 76571129 76572031 111193 110255 NC_000014.9 velvet.16217 99.32 True fake: scaffold gap size wrong estimation (local) 76566033 76566771 113309 112586 NC_000014.9 velvet.16217 97.83 True relocation, scaffold gap is present, inconsistency = 15878197 92444979 92446187 113320 114528 NC_000014.9 velvet.16217 100.0 True fake: not a misassembly (possible transposable element) 89534392 89536530 114539 116677 NC_000014.9 velvet.16217 99.95 True fake: not a misassembly (possible transposable element) 92446414 92448368 116688 118642 NC_000014.9 velvet.16217 99.95 True relocation, scaffold gap is present, inconsistency = 18289384 74153814 74157019 121858 118653 NC_000014.9 velvet.16217 99.94 True relocation, scaffold gap is present, inconsistency = 5307058 68846202 68846745 122412 121869 NC_000014.9 velvet.16217 96.51 True relocation, scaffold gap is present, inconsistency = -12713847 81557998 81559741 124463 122720 NC_000014.9 velvet.16217 99.94 True fake: scaffold gap size wrong estimation (local) 81555081 81557887 128184 125379 NC_000014.9 velvet.16217 99.93 True fake: scaffold gap size wrong estimation (local) 81552538 81554123 131535 129950 NC_000014.9 velvet.16217 99.81 True fake: scaffold gap size wrong estimation (local) 81549696 81552249 135191 132638 NC_000014.9 velvet.16217 100.0 True fake: not a misassembly (possible transposable element) 51856714 51858678 139037 141001 NC_000014.9 velvet.16217 99.8 True fake: not a misassembly (possible transposable element) 81539171 81540459 142486 141198 NC_000014.9 velvet.16217 99.22 True fake: scaffold gap size wrong estimation (local) 81531801 81538779 150921 143595 NC_000014.9 velvet.16217 99.74 True relocation, scaffold gap is present, inconsistency = 12704322 68812114 68825357 166254 153043 NC_000014.9 velvet.16217 98.93 True relocation, scaffold gap is present, inconsistency = 16942457 51863014 51869646 166265 172895 NC_000014.9 velvet.16217 99.74 True fake: scaffold gap size wrong estimation (local) 51869803 51874171 173793 178394 NC_000014.9 velvet.16217 99.88 True relocation, scaffold gap is present, inconsistency = 16923715 68798614 68799381 179889 179122 NC_000014.9 velvet.16217 100.0 True relocation, scaffold gap is present, inconsistency = -31939355 100728225 100736154 189695 181704 NC_000014.9 velvet.16217 99.94 True fake: scaffold gap size wrong estimation (local) 100710406 100723080 209277 196511 NC_000014.9 velvet.16217 99.83 True fake: scaffold gap size wrong estimation (local) 100707716 100709731 212828 210396 NC_000014.9 velvet.16217 99.95 True fake: scaffold gap size wrong estimation (local) 100706129 100707490 214611 213298 NC_000014.9 velvet.16217 96.33 True fake: scaffold gap size wrong estimation (local) 100699866 100705679 221688 215875 NC_000014.9 velvet.16217 99.98 True fake: scaffold gap size wrong estimation (local) 100696571 100697197 225368 224742 NC_000014.9 velvet.16217 100.0 True relocation, scaffold gap is present, inconsistency = 48812247 51881019 51881722 227970 228673 NC_000014.9 velvet.16217 100.0 True relocation, scaffold gap is present, inconsistency = -17034464 34847269 34847904 228684 229319 NC_000014.9 velvet.16217 99.84 True fake: scaffold gap size wrong estimation (local) 34848589 34850115 230182 231708 NC_000014.9 velvet.16217 99.28 True fake: scaffold gap size wrong estimation (local) 34850289 34851232 232835 233774 NC_000014.9 velvet.16217 99.47 True fake: scaffold gap size wrong estimation (local) 34852636 34853535 234718 235617 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 34855734 34856305 238582 239153 NC_000014.9 velvet.16217 100.0 True relocation, scaffold gap is present, inconsistency = 17039393 51902659 51906773 246114 250323 NC_000014.9 velvet.16217 97.46 True fake: scaffold gap size wrong estimation (local) 51907058 51908549 253808 255299 NC_000014.9 velvet.16217 99.93 True fake: scaffold gap size wrong estimation (local) 51908813 51917875 256297 266351 NC_000014.9 velvet.16217 99.9 True relocation, scaffold gap is present, inconsistency = -17030626 34887260 34888796 266362 267898 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 34889471 34890530 269176 270282 NC_000014.9 velvet.16217 99.9 True fake: scaffold gap size wrong estimation (local) 34893186 34893820 273321 273955 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 34895144 34896259 276322 277437 NC_000014.9 velvet.16217 100.0 True local misassembly 34896486 34897014 277438 277966 NC_000014.9 velvet.16217 98.11 True fake: scaffold gap size wrong estimation (local) 34920274 34921091 299534 300351 NC_000014.9 velvet.16217 99.76 True fake: scaffold gap size wrong estimation (local) 34923114 34923871 303122 303879 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 34925767 34927172 306463 307906 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 34930017 34931890 312862 315041 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 34932607 34933897 318350 319696 NC_000014.9 velvet.16217 95.26 True fake: scaffold gap size wrong estimation (local) 34936248 34937014 322594 323360 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 34949178 34949726 328865 329413 NC_000014.9 velvet.16217 100.0 True local misassembly 34949910 34950609 329414 330113 NC_000014.9 velvet.16217 98.57 True fake: scaffold gap size wrong estimation (local) 34951867 34952643 332339 333115 NC_000014.9 velvet.16217 99.87 True fake: scaffold gap size wrong estimation (local) 34954656 34955507 335885 336736 NC_000014.9 velvet.16217 100.0 True relocation, scaffold gap is present, inconsistency = -59906 34902199 34903353 343334 344488 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 34934785 34935905 375451 376571 NC_000014.9 velvet.16217 100.0 True relocation, scaffold gap is present, inconsistency = 60242495 95178580 95179118 377289 376751 NC_000014.9 velvet.16217 100.0 True relocation, scaffold gap is present, inconsistency = 60223504 34937368 34938234 394131 394997 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 34938812 34940651 396527 398366 NC_000014.9 velvet.16217 100.0 True relocation, scaffold gap is present, inconsistency = 60212557 95153219 95158592 403907 398377 NC_000014.9 velvet.16217 99.98 True relocation, scaffold gap is present, inconsistency = 38343790 56800578 56809418 413566 403918 NC_000014.9 velvet.16217 99.74 True relocation, scaffold gap is present, inconsistency = 21853945 34941729 34942641 417558 418470 NC_000014.9 velvet.16217 99.89 True fake: scaffold gap size wrong estimation (local) 34944935 34947180 421459 423651 NC_000014.9 velvet.16217 97.63 True fake: scaffold gap size wrong estimation (local) 34947681 34948364 424723 425406 NC_000014.9 velvet.16217 100.0 True relocation, scaffold gap is present, inconsistency = -17961 34963342 34964766 458345 459726 NC_000014.9 velvet.16217 96.96 True relocation, scaffold gap is present, inconsistency = 2321976 32634882 32641355 466778 459737 NC_000014.9 velvet.16217 99.89 True relocation, scaffold gap is present, inconsistency = 2334535 34980232 34981163 471120 472046 NC_000014.9 velvet.16217 99.46 True fake: scaffold gap size wrong estimation (local) 34981256 34984589 473083 476416 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 34984804 34986138 477162 478542 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 34987319 34988312 480405 481398 NC_000014.9 velvet.16217 99.9 True fake: scaffold gap size wrong estimation (local) 34988613 34989301 482490 483178 NC_000014.9 velvet.16217 99.85 True local misassembly 34989474 34991129 483179 484834 NC_000014.9 velvet.16217 99.4 True fake: scaffold gap size wrong estimation (local) 34991433 34991976 485825 486368 NC_000014.9 velvet.16217 99.63 True fake: scaffold gap size wrong estimation (local) 34992968 34993726 487536 488294 NC_000014.9 velvet.16217 98.42 True fake: scaffold gap size wrong estimation (local) 35000596 35001205 488640 489249 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 35003023 35003529 492118 492624 NC_000014.9 velvet.16217 100.0 True local misassembly 34999315 35000067 494552 495304 NC_000014.9 velvet.16217 99.87 True fake: scaffold gap size wrong estimation (local) 35006141 35007019 495706 496584 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 35007781 35008904 497498 498621 NC_000014.9 velvet.16217 99.91 True fake: scaffold gap size wrong estimation (local) 35009185 35009781 499223 499819 NC_000014.9 velvet.16217 99.83 True fake: scaffold gap size wrong estimation (local) 35010784 35011974 500675 502187 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 35012252 35012960 503100 503808 NC_000014.9 velvet.16217 100.0 True local misassembly 35013244 35014293 503809 504858 NC_000014.9 velvet.16217 98.86 True fake: scaffold gap size wrong estimation (local) 35014580 35015125 505655 506200 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 35015369 35016839 510235 511705 NC_000014.9 velvet.16217 99.93 True fake: scaffold gap size wrong estimation (local) 35017146 35019946 512707 515505 NC_000014.9 velvet.16217 99.93 True fake: scaffold gap size wrong estimation (local) 35020204 35021398 516521 517715 NC_000014.9 velvet.16217 100.0 True inversion, scaffold gap is present 35022616 35023513 519810 518913 NC_000014.9 velvet.16217 98.89 True local misassembly 35021452 35022357 520716 519811 NC_000014.9 velvet.16217 100.0 True relocation, scaffold gap is present, inconsistency = 54241 34964896 34966927 521000 523031 NC_000014.9 velvet.16217 100.0 True relocation, scaffold gap is present, inconsistency = 2306124 32619879 32629398 562973 552405 NC_000014.9 velvet.16217 99.84 True relocation, scaffold gap is present, inconsistency = 2364805 34994297 34994825 563067 563595 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 34995202 34998547 564672 568121 NC_000014.9 velvet.16217 99.1 True fake: scaffold gap size wrong estimation (local) 35004217 35005504 568132 569427 NC_000014.9 velvet.16217 100.0 True relocation, scaffold gap is present, inconsistency = 38827702 73833462 73834633 570854 569683 NC_000014.9 velvet.16217 99.91 True fake: scaffold gap size wrong estimation (local) 73831891 73832662 573593 572822 NC_000014.9 velvet.16217 98.7 True fake: scaffold gap size wrong estimation (local) 73829100 73830399 576881 575582 NC_000014.9 velvet.16217 100.0 True relocation, scaffold gap is present, inconsistency = 41220863 32605139 32608226 579979 576892 NC_000014.9 velvet.16217 99.84 True relocation, scaffold gap is present, inconsistency = -9760 32612199 32614888 582679 579990 NC_000014.9 velvet.16217 99.55 True local misassembly 32609897 32612187 587548 585258 NC_000014.9 velvet.16217 99.56 True relocation, scaffold gap is present, inconsistency = -11326 32619178 32619763 589592 589008 NC_000014.9 velvet.16217 99.66 True fake: scaffold gap size wrong estimation (local) 32617909 32618700 591150 590363 NC_000014.9 velvet.16217 99.49 True fake: scaffold gap size wrong estimation (local) 32616581 32617626 593056 592011 NC_000014.9 velvet.16217 99.04 True local misassembly 32615868 32616370 593657 593155 NC_000014.9 velvet.16217 100.0 True relocation, scaffold gap is present, inconsistency = 7083883 25527990 25531974 597649 593668 NC_000014.9 velvet.16217 97.96 True fake: scaffold gap size wrong estimation (local) 25525850 25527809 600127 598163 NC_000014.9 velvet.16217 99.34 True fake: scaffold gap size wrong estimation (local) 25524073 25525664 602348 600757 NC_000014.9 velvet.16217 99.81 True fake: scaffold gap size wrong estimation (local) 25520314 25523785 606751 603222 NC_000014.9 velvet.16217 99.86 True fake: scaffold gap size wrong estimation (local) 25516020 25520028 611781 607773 NC_000014.9 velvet.16217 99.95 True relocation, scaffold gap is present, inconsistency = -48282471 73794934 73797190 615361 613082 NC_000014.9 velvet.16217 98.47 True fake: scaffold gap size wrong estimation (local) 73763292 73764128 640534 639697 NC_000014.9 velvet.16217 99.88 True fake: scaffold gap size wrong estimation (local) 73757280 73763161 647091 641211 NC_000014.9 velvet.16217 99.98 True relocation, scaffold gap is present, inconsistency = 38717873 35037657 35038538 647960 648839 NC_000014.9 velvet.16217 99.77 True fake: scaffold gap size wrong estimation (local) 35042912 35043438 649523 650049 NC_000014.9 velvet.16217 99.81 True local misassembly 35040311 35040855 651372 651916 NC_000014.9 velvet.16217 100.0 True local misassembly 35041135 35042121 651917 652903 NC_000014.9 velvet.16217 98.99 True fake: scaffold gap size wrong estimation (local) 35043597 35044151 652914 653468 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 35044900 35046400 653683 655183 NC_000014.9 velvet.16217 99.33 True indel: indel (<= 5bp) 35046403 35047529 655184 656310 NC_000014.9 velvet.16217 99.91 True fake: scaffold gap size wrong estimation (local) 35047793 35048907 657483 658597 NC_000014.9 velvet.16217 99.91 True fake: scaffold gap size wrong estimation (local) 35050312 35051156 660892 661736 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 35051705 35052289 661975 662559 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 35056649 35057416 668796 669563 NC_000014.9 velvet.16217 99.74 True fake: scaffold gap size wrong estimation (local) 35060277 35061086 672827 673636 NC_000014.9 velvet.16217 99.75 True fake: scaffold gap size wrong estimation (local) 35061772 35062720 675616 676564 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 35067093 35069301 682535 684750 NC_000014.9 velvet.16217 99.95 True fake: scaffold gap size wrong estimation (local) 35071286 35072023 687419 688156 NC_000014.9 velvet.16217 98.51 True fake: scaffold gap size wrong estimation (local) 35073218 35074191 690384 691354 NC_000014.9 velvet.16217 99.69 True local misassembly 35072248 35073092 694710 695537 NC_000014.9 velvet.16217 97.84 True fake: scaffold gap size wrong estimation (local) 35076625 35077492 700464 701331 NC_000014.9 velvet.16217 99.88 True fake: scaffold gap size wrong estimation (local) 35077786 35078387 702123 702724 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 35078597 35080548 703302 705257 NC_000014.9 velvet.16217 99.74 True fake: scaffold gap size wrong estimation (local) 35080784 35082272 706018 707554 NC_000014.9 velvet.16217 99.86 True fake: scaffold gap size wrong estimation (local) 35082597 35083499 708082 708984 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 35085108 35086221 711390 712503 NC_000014.9 velvet.16217 99.91 True fake: scaffold gap size wrong estimation (local) 35094966 35095597 722143 722774 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (extensive) 35107818 35108405 726445 727032 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 35109356 35110979 728997 730619 NC_000014.9 velvet.16217 99.94 True relocation, scaffold gap is present, inconsistency = -7828 35106966 35107799 734434 735267 NC_000014.9 velvet.16217 99.64 True fake: scaffold gap size wrong estimation (local) 35111267 35114743 735278 738652 NC_000014.9 velvet.16217 96.9 True fake: scaffold gap size wrong estimation (local) 35116544 35117709 741449 742614 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 35117999 35118671 746164 746836 NC_000014.9 velvet.16217 100.0 True fake: scaffold gap size wrong estimation (local) 35120531 35121141 749039 749649 NC_000014.9 velvet.16217 99.84 True fake: scaffold gap size wrong estimation (local) 35121232 35124301 750105 753219 NC_000014.9 velvet.16217 99.97 True fake: scaffold gap size wrong estimation (local) 35124363 35124884 754238 754759 NC_000014.9 velvet.16217 99.81 True fake: scaffold gap size wrong estimation (local) 35125146 35127136 754923 756913 NC_000014.9 velvet.16217 99.4 True fake: scaffold gap size wrong estimation (local) 35128338 35128940 758936 759538 NC_000014.9 velvet.16217 100.0 True local misassembly 35127218 35128204 760569 761555 NC_000014.9 velvet.16217 99.9 True fake: scaffold gap size wrong estimation (local) 35150148 35151950 780872 782628 NC_000014.9 velvet.16217 97.43 True fake: scaffold gap size wrong estimation (local) 35153437 35154912 784890 786405 NC_000014.9 velvet.16217 99.93 True CONTIG velvet.16217 786965 misassembled 86774590 86775166 1686 1111 NC_000014.9 velvet.16225 98.44 True CONTIG velvet.16225 1686 correct_unaligned 19045706 19046211 1 506 NC_000014.9 velvet.16255 100.0 True CONTIG velvet.16255 506 correct CONTIG velvet.16266 251 unaligned 18987436 18988822 1387 1 NC_000014.9 velvet.16272 99.86 True CONTIG velvet.16272 1387 correct CONTIG velvet.16275 238 unaligned 79284390 79289362 1 5797 NC_000014.9 velvet.16280 99.98 True fake: scaffold gap size wrong estimation (local) 79289651 79290692 6933 7973 NC_000014.9 velvet.16280 99.9 True CONTIG velvet.16280 7973 correct CONTIG velvet.16287 205 unaligned CONTIG velvet.16290 65927 unaligned CONTIG velvet.16315 274 unaligned CONTIG velvet.16338 369 unaligned CONTIG velvet.16349 227 unaligned CONTIG velvet.16350 416 unaligned CONTIG velvet.16361 282 unaligned CONTIG velvet.16387 298 unaligned CONTIG velvet.16388 209 unaligned CONTIG velvet.16403 253 unaligned CONTIG velvet.16407 294 unaligned CONTIG velvet.16419 388 unaligned CONTIG velvet.16434 205 unaligned CONTIG velvet.16466 1213 unaligned CONTIG velvet.16469 418 unaligned CONTIG velvet.16535 228 unaligned 55179033 55179919 2752 1866 NC_000014.9 velvet.16550 100.0 True fake: scaffold gap size wrong estimation (local) 55178233 55178761 4036 3508 NC_000014.9 velvet.16550 100.0 True CONTIG velvet.16550 4036 correct 20890517 20891037 521 1 NC_000014.9 velvet.16557 98.08 True CONTIG velvet.16557 521 correct CONTIG velvet.16566 203 unaligned CONTIG velvet.16606 271 unaligned CONTIG velvet.16616 204 unaligned CONTIG velvet.16618 230 unaligned 46114986 46117668 2715 33 NC_000014.9 velvet.16626 99.85 True CONTIG velvet.16626 2715 correct 38680997 38683320 1 2230 NC_000014.9 velvet.16635 95.36 True CONTIG velvet.16635 2252 correct CONTIG velvet.16638 356 unaligned CONTIG velvet.16678 362 unaligned CONTIG velvet.16682 452 unaligned CONTIG velvet.16694 389 unaligned CONTIG velvet.16701 312 unaligned CONTIG velvet.16745 259 unaligned CONTIG velvet.16759 279 unaligned CONTIG velvet.16795 320 unaligned CONTIG velvet.16797 415 unaligned 61062117 61062709 980 1572 NC_000014.9 velvet.16804 98.31 True CONTIG velvet.16804 1572 correct_unaligned CONTIG velvet.16838 261 unaligned 84195145 84196783 1 1684 NC_000014.9 velvet.16841 100.0 True CONTIG velvet.16841 3290 correct CONTIG velvet.16906 247 unaligned CONTIG velvet.16926 209 unaligned 52148640 52149255 1 609 NC_000014.9 velvet.16932 98.68 True CONTIG velvet.16932 609 correct 87781523 87782413 1 891 NC_000014.9 velvet.16933 100.0 True CONTIG velvet.16933 891 correct CONTIG velvet.16934 267 unaligned CONTIG velvet.16939 273 unaligned CONTIG velvet.16941 213 unaligned CONTIG velvet.16991 2300 unaligned 103052420 103053096 1 677 NC_000014.9 velvet.17023 99.85 True CONTIG velvet.17023 677 correct CONTIG velvet.17027 573 unaligned 104270283 104270828 546 1 NC_000014.9 velvet.17072 99.82 True CONTIG velvet.17072 546 correct 66206583 66207537 1 994 NC_000014.9 velvet.17073 99.37 True CONTIG velvet.17073 994 correct CONTIG velvet.17101 444 unaligned CONTIG velvet.17116 401 unaligned CONTIG velvet.17118 271 unaligned CONTIG velvet.17125 688 unaligned CONTIG velvet.17140 300 unaligned CONTIG velvet.17162 250 unaligned CONTIG velvet.17176 317 unaligned CONTIG velvet.17180 362 unaligned CONTIG velvet.17201 259 unaligned CONTIG velvet.17207 222 unaligned CONTIG velvet.17208 219 unaligned CONTIG velvet.17236 209 unaligned CONTIG velvet.17239 245 unaligned CONTIG velvet.17244 227 unaligned CONTIG velvet.17247 366 unaligned CONTIG velvet.17261 202 unaligned CONTIG velvet.17274 224 unaligned CONTIG velvet.17297 300 unaligned 55132838 55135164 2238 1 NC_000014.9 velvet.17303 96.1 True fake: scaffold gap size wrong estimation (local) 55130827 55132553 4966 3240 NC_000014.9 velvet.17303 99.94 True fake: scaffold gap size wrong estimation (local) 55126886 55130564 9924 5617 NC_000014.9 velvet.17303 100.0 True fake: scaffold gap size wrong estimation (local) 55124730 55126658 12890 10962 NC_000014.9 velvet.17303 99.95 True fake: scaffold gap size wrong estimation (local) 55107893 55108638 28670 27925 NC_000014.9 velvet.17303 99.87 True fake: scaffold gap size wrong estimation (local) 55101750 55105086 32126 28681 NC_000014.9 velvet.17303 99.85 True fake: scaffold gap size wrong estimation (local) 55100464 55101194 34263 33533 NC_000014.9 velvet.17303 99.86 True fake: scaffold gap size wrong estimation (local) 55099608 55100248 35054 34414 NC_000014.9 velvet.17303 100.0 True fake: scaffold gap size wrong estimation (local) 55096817 55098638 38725 36904 NC_000014.9 velvet.17303 99.78 True fake: scaffold gap size wrong estimation (local) 55093700 55094464 43261 42497 NC_000014.9 velvet.17303 98.56 True local misassembly 55092807 55093440 43895 43262 NC_000014.9 velvet.17303 99.84 True fake: scaffold gap size wrong estimation (local) 55091581 55092225 45439 44795 NC_000014.9 velvet.17303 100.0 True relocation, scaffold gap is present, inconsistency = -25276 55105570 55106327 56726 55969 NC_000014.9 velvet.17303 100.0 True relocation, scaffold gap is present, inconsistency = 16314 55078990 55079687 66992 66295 NC_000014.9 velvet.17303 99.86 True fake: scaffold gap size wrong estimation (local) 55076972 55078253 70254 68973 NC_000014.9 velvet.17303 100.0 True relocation, scaffold gap is present, inconsistency = 10079 55064265 55066882 72942 70265 NC_000014.9 velvet.17303 99.88 True fake: scaffold gap size wrong estimation (local) 55060457 55061871 77176 75766 NC_000014.9 velvet.17303 99.65 True fake: scaffold gap size wrong estimation (local) 55059445 55060150 78268 77563 NC_000014.9 velvet.17303 100.0 True fake: scaffold gap size wrong estimation (local) 55057906 55058548 81024 80382 NC_000014.9 velvet.17303 98.44 True local misassembly 55056785 55057475 81715 81025 NC_000014.9 velvet.17303 100.0 True relocation, scaffold gap is present, inconsistency = -225476 55280797 55281984 83284 81992 NC_000014.9 velvet.17303 99.74 True relocation, scaffold gap is present, inconsistency = 203316 55075546 55076264 85219 84501 NC_000014.9 velvet.17303 99.72 True fake: scaffold gap size wrong estimation (local) 55074330 55075234 86717 85813 NC_000014.9 velvet.17303 99.89 True fake: scaffold gap size wrong estimation (local) 55073352 55074258 87803 86897 NC_000014.9 velvet.17303 99.78 True fake: scaffold gap size wrong estimation (local) 55070705 55073073 91244 88689 NC_000014.9 velvet.17303 99.65 True fake: scaffold gap size wrong estimation (local) 55067667 55070456 95143 92316 NC_000014.9 velvet.17303 99.93 True fake: scaffold gap size wrong estimation (local) 55061900 55063996 97250 95154 NC_000014.9 velvet.17303 99.9 True relocation, scaffold gap is present, inconsistency = -218534 55279285 55280423 98399 97261 NC_000014.9 velvet.17303 99.91 True fake: scaffold gap size wrong estimation (local) 55276768 55278797 101701 99672 NC_000014.9 velvet.17303 99.95 True fake: scaffold gap size wrong estimation (local) 55275824 55276515 103494 102803 NC_000014.9 velvet.17303 100.0 True fake: scaffold gap size wrong estimation (local) 55274066 55275520 105264 103805 NC_000014.9 velvet.17303 99.79 True relocation, scaffold gap is present, inconsistency = 217549 55055917 55056506 105864 105275 NC_000014.9 velvet.17303 100.0 True fake: scaffold gap size wrong estimation (local) 55054400 55055673 107307 106035 NC_000014.9 velvet.17303 99.92 True fake: scaffold gap size wrong estimation (local) 55050728 55054172 112650 108466 NC_000014.9 velvet.17303 99.91 True fake: scaffold gap size wrong estimation (local) 55048194 55050448 115290 113036 NC_000014.9 velvet.17303 100.0 True fake: scaffold gap size wrong estimation (local) 55042038 55048059 122250 116227 NC_000014.9 velvet.17303 99.87 True relocation, scaffold gap is present, inconsistency = -233608 55271643 55273831 126253 124065 NC_000014.9 velvet.17303 99.91 True fake: scaffold gap size wrong estimation (local) 55269842 55271536 128726 127032 NC_000014.9 velvet.17303 99.76 True fake: scaffold gap size wrong estimation (local) 55267399 55269558 131951 129792 NC_000014.9 velvet.17303 99.77 True relocation, scaffold gap is present, inconsistency = 198890 55039886 55040466 160574 159994 NC_000014.9 velvet.17303 99.83 True fake: scaffold gap size wrong estimation (local) 55011650 55013860 184352 182207 NC_000014.9 velvet.17303 97.0 True fake: scaffold gap size wrong estimation (local) 55006145 55006999 185913 185059 NC_000014.9 velvet.17303 100.0 True relocation, scaffold gap is present, inconsistency = -50535243 105538514 105539112 188787 188189 NC_000014.9 velvet.17303 100.0 True relocation, scaffold gap is present, inconsistency = 1561657 103974785 103976312 189332 190816 NC_000014.9 velvet.17303 97.17 True relocation, scaffold gap is present, inconsistency = -48971490 55007269 55008811 193263 194805 NC_000014.9 velvet.17303 99.81 True fake: scaffold gap size wrong estimation (local) 55010109 55011277 196771 197939 NC_000014.9 velvet.17303 99.14 True fake: scaffold gap size wrong estimation (local) 55013909 55015715 200929 202804 NC_000014.9 velvet.17303 98.08 True fake: scaffold gap size wrong estimation (local) 55016000 55017400 203389 204789 NC_000014.9 velvet.17303 100.0 True fake: scaffold gap size wrong estimation (local) 55017584 55018799 205217 206467 NC_000014.9 velvet.17303 97.5 True fake: scaffold gap size wrong estimation (local) 55019020 55019620 207041 207641 NC_000014.9 velvet.17303 100.0 True fake: scaffold gap size wrong estimation (local) 55019866 55021420 208313 209867 NC_000014.9 velvet.17303 99.94 True fake: scaffold gap size wrong estimation (local) 55021689 55022512 210209 211032 NC_000014.9 velvet.17303 100.0 True relocation, scaffold gap is present, inconsistency = 50517664 105540739 105542403 211595 213259 NC_000014.9 velvet.17303 99.94 True fake: scaffold gap size wrong estimation (local) 105542404 105543475 214202 215273 NC_000014.9 velvet.17303 98.04 True indel: indel (<= 5bp) 105543478 105544745 215274 216541 NC_000014.9 velvet.17303 100.0 True relocation, scaffold gap is present, inconsistency = -42190249 63354937 63357346 216982 219439 NC_000014.9 velvet.17303 100.0 True relocation, scaffold gap is present, inconsistency = 8350414 55003834 55004512 220128 219450 NC_000014.9 velvet.17303 99.56 True fake: scaffold gap size wrong estimation (local) 55002847 55003463 221302 220686 NC_000014.9 velvet.17303 99.84 True fake: scaffold gap size wrong estimation (local) 54987901 54989647 231546 229769 NC_000014.9 velvet.17303 99.42 True fake: scaffold gap size wrong estimation (local) 54984452 54987403 235803 232779 NC_000014.9 velvet.17303 99.9 True relocation, scaffold gap is present, inconsistency = -18185 54998409 55002623 240985 235817 NC_000014.9 velvet.17303 98.32 True fake: scaffold gap size wrong estimation (local) 54995293 54996331 246492 245450 NC_000014.9 velvet.17303 99.52 True fake: scaffold gap size wrong estimation (local) 54992775 54993310 250279 249745 NC_000014.9 velvet.17303 99.63 True fake: scaffold gap size wrong estimation (local) 54990599 54991850 253239 251988 NC_000014.9 velvet.17303 100.0 True fake: scaffold gap size wrong estimation (local) 54982273 54982905 255815 255183 NC_000014.9 velvet.17303 98.1 True local misassembly 54981202 54981990 256604 255816 NC_000014.9 velvet.17303 99.87 True fake: scaffold gap size wrong estimation (local) 54977915 54979227 261400 260088 NC_000014.9 velvet.17303 99.54 True fake: scaffold gap size wrong estimation (local) 54975609 54977433 264631 262807 NC_000014.9 velvet.17303 99.34 True local misassembly 54974761 54975352 265223 264632 NC_000014.9 velvet.17303 99.83 True fake: scaffold gap size wrong estimation (local) 54972601 54974382 268569 266793 NC_000014.9 velvet.17303 99.49 True fake: scaffold gap size wrong estimation (local) 54971370 54971925 271021 270419 NC_000014.9 velvet.17303 99.42 True fake: scaffold gap size wrong estimation (local) 54935211 54936445 300204 298975 NC_000014.9 velvet.17303 99.51 True relocation, scaffold gap is present, inconsistency = -11694 54945811 54946511 301298 300598 NC_000014.9 velvet.17303 98.43 True local misassembly 54944879 54945614 302034 301299 NC_000014.9 velvet.17303 100.0 True fake: scaffold gap size wrong estimation (local) 54942260 54944380 305734 303562 NC_000014.9 velvet.17303 96.31 True relocation, scaffold gap is present, inconsistency = -28049 54969346 54970298 306724 305745 NC_000014.9 velvet.17303 96.94 True fake: scaffold gap size wrong estimation (local) 54967871 54968694 309169 308346 NC_000014.9 velvet.17303 98.79 True local misassembly 54966341 54967630 310540 309251 NC_000014.9 velvet.17303 100.0 True fake: scaffold gap size wrong estimation (local) 54964640 54965668 313160 312132 NC_000014.9 velvet.17303 99.81 True fake: scaffold gap size wrong estimation (local) 54963855 54964355 313781 313281 NC_000014.9 velvet.17303 100.0 True fake: scaffold gap size wrong estimation (local) 54962115 54963518 316514 315114 NC_000014.9 velvet.17303 99.79 True fake: scaffold gap size wrong estimation (local) 54960842 54961824 317624 316642 NC_000014.9 velvet.17303 100.0 True fake: scaffold gap size wrong estimation (local) 54959431 54960166 320044 319309 NC_000014.9 velvet.17303 98.51 True fake: scaffold gap size wrong estimation (local) 54958395 54959093 320947 320249 NC_000014.9 velvet.17303 99.86 True fake: scaffold gap size wrong estimation (local) 54956532 54958185 324273 322583 NC_000014.9 velvet.17303 99.57 True fake: scaffold gap size wrong estimation (local) 54954999 54955885 325940 325054 NC_000014.9 velvet.17303 99.89 True fake: scaffold gap size wrong estimation (local) 54938760 54941966 339349 336083 NC_000014.9 velvet.17303 99.91 True fake: scaffold gap size wrong estimation (local) 54936454 54937922 342527 341059 NC_000014.9 velvet.17303 99.93 True relocation, scaffold gap is present, inconsistency = 33586798 88525702 88526305 343509 344112 NC_000014.9 velvet.17303 100.0 True relocation, scaffold gap is present, inconsistency = -20395 88506100 88506822 344302 345024 NC_000014.9 velvet.17303 99.86 True fake: scaffold gap size wrong estimation (local) 88507027 88508167 345497 346636 NC_000014.9 velvet.17303 99.91 True fake: scaffold gap size wrong estimation (local) 88508309 88509783 347148 348622 NC_000014.9 velvet.17303 100.0 True fake: scaffold gap size wrong estimation (local) 88510022 88510943 349127 350048 NC_000014.9 velvet.17303 100.0 True relocation, scaffold gap is present, inconsistency = 11506 88522460 88524659 350059 352284 NC_000014.9 velvet.17303 99.59 True relocation, scaffold gap is present, inconsistency = -33603926 54928036 54929390 359587 360941 NC_000014.9 velvet.17303 100.0 True local misassembly 54927040 54927962 360967 361887 NC_000014.9 velvet.17303 99.78 True relocation, scaffold gap is present, inconsistency = 1743246 56674278 56676799 367524 364957 NC_000014.9 velvet.17303 99.52 True fake: scaffold gap size wrong estimation (local) 56634845 56639281 403985 398905 NC_000014.9 velvet.17303 99.86 True fake: scaffold gap size wrong estimation (local) 56632708 56634616 406493 404421 NC_000014.9 velvet.17303 99.31 True fake: scaffold gap size wrong estimation (local) 56631976 56632551 407593 407018 NC_000014.9 velvet.17303 100.0 True CONTIG velvet.17303 407593 misassembled CONTIG velvet.17304 227 unaligned CONTIG velvet.17341 402 unaligned CONTIG velvet.17367 285 unaligned CONTIG velvet.17378 283 unaligned CONTIG velvet.17406 232 unaligned CONTIG velvet.17446 206 unaligned CONTIG velvet.17466 205 unaligned CONTIG velvet.17489 253 unaligned CONTIG velvet.17494 456 unaligned CONTIG velvet.17499 3891 unaligned 19083056 19084600 1 1545 NC_000014.9 velvet.17512 99.94 True CONTIG velvet.17512 1545 correct CONTIG velvet.17525 210 unaligned CONTIG velvet.17536 254 unaligned CONTIG velvet.17543 514 unaligned CONTIG velvet.17589 488 unaligned CONTIG velvet.17618 334 unaligned CONTIG velvet.17635 409 unaligned CONTIG velvet.17650 402 unaligned CONTIG velvet.17656 250 unaligned CONTIG velvet.17674 236 unaligned CONTIG velvet.17677 314 unaligned CONTIG velvet.17687 203 unaligned CONTIG velvet.17713 207 unaligned 105993745 105994810 1 1066 NC_000014.9 velvet.17733 100.0 True CONTIG velvet.17733 1066 correct 96767852 96769002 1247 89 NC_000014.9 velvet.17741 99.14 True CONTIG velvet.17741 1247 correct CONTIG velvet.17752 285 unaligned CONTIG velvet.17763 224 unaligned CONTIG velvet.17765 382 unaligned CONTIG velvet.17774 393 unaligned CONTIG velvet.17778 281 unaligned CONTIG velvet.17793 319 unaligned CONTIG velvet.17801 220 unaligned CONTIG velvet.17802 442 unaligned 35283843 35285111 2719 3987 NC_000014.9 velvet.17812 100.0 True CONTIG velvet.17812 3987 correct 102748703 102751632 1 2930 NC_000014.9 velvet.17820 100.0 True CONTIG velvet.17820 29486 correct CONTIG velvet.17836 215 unaligned CONTIG velvet.17845 211 unaligned CONTIG velvet.17851 351 unaligned 18865974 18866490 1 517 NC_000014.9 velvet.17869 99.81 True CONTIG velvet.17869 517 correct CONTIG velvet.17878 208 unaligned CONTIG velvet.17887 297 unaligned CONTIG velvet.17909 268 unaligned CONTIG velvet.17929 201 unaligned CONTIG velvet.17933 3594 unaligned CONTIG velvet.17944 3913 unaligned CONTIG velvet.17950 383 unaligned 43965938 43966529 1 592 NC_000014.9 velvet.17965 99.66 True CONTIG velvet.17965 592 correct CONTIG velvet.17970 381 unaligned CONTIG velvet.17971 316 unaligned CONTIG velvet.18021 214 unaligned 50080823 50081477 1 655 NC_000014.9 velvet.18065 100.0 True CONTIG velvet.18065 655 correct CONTIG velvet.18070 217 unaligned CONTIG velvet.18089 267 unaligned CONTIG velvet.18107 272 unaligned 25173187 25173746 1 560 NC_000014.9 velvet.18135 100.0 True fake: scaffold gap size wrong estimation (local) 25173921 25179936 1003 7819 NC_000014.9 velvet.18135 99.92 True fake: scaffold gap size wrong estimation (local) 25210982 25213608 35960 38996 NC_000014.9 velvet.18135 99.92 True CONTIG velvet.18135 38996 correct CONTIG velvet.18147 351 unaligned CONTIG velvet.18165 209 unaligned 19258509 19259046 537 1 NC_000014.9 velvet.18166 98.7 True CONTIG velvet.18166 540 correct CONTIG velvet.18180 296 unaligned CONTIG velvet.18190 424 unaligned CONTIG velvet.18211 226 unaligned CONTIG velvet.18220 230 unaligned 44028880 44043497 16291 1 NC_000014.9 velvet.18237 99.64 True fake: scaffold gap size wrong estimation (local) 44027206 44028792 18841 17255 NC_000014.9 velvet.18237 100.0 True CONTIG velvet.18237 18841 correct CONTIG velvet.18243 313 unaligned 19660885 19661438 1 554 NC_000014.9 velvet.18354 99.64 True CONTIG velvet.18354 554 correct CONTIG velvet.18392 420 unaligned CONTIG velvet.18443 478 unaligned CONTIG velvet.18509 434 unaligned CONTIG velvet.18511 292 unaligned CONTIG velvet.18545 228 unaligned 22216281 22216843 1 563 NC_000014.9 velvet.18562 100.0 True CONTIG velvet.18562 563 correct CONTIG velvet.18583 363 unaligned 19409594 19410478 1 885 NC_000014.9 velvet.18588 99.89 True CONTIG velvet.18588 885 correct CONTIG velvet.18596 380 unaligned CONTIG velvet.18615 270 unaligned CONTIG velvet.18630 460 unaligned CONTIG velvet.18651 255 unaligned CONTIG velvet.18679 3838 unaligned 101307324 101307978 1 661 NC_000014.9 velvet.18692 99.08 True fake: scaffold gap size wrong estimation (local) 101310158 101310725 3308 3875 NC_000014.9 velvet.18692 100.0 True CONTIG velvet.18692 4295 correct 58755051 58761192 6142 1 NC_000014.9 velvet.18693 99.92 True fake: scaffold gap size wrong estimation (local) 58748651 58754901 13594 7209 NC_000014.9 velvet.18693 99.79 True fake: scaffold gap size wrong estimation (local) 58743215 58748381 19846 14688 NC_000014.9 velvet.18693 99.54 True relocation, scaffold gap is present, inconsistency = -29943101 88685709 88686305 20453 19857 NC_000014.9 velvet.18693 100.0 True inversion, scaffold gap is present 88684560 88685682 22307 23429 NC_000014.9 velvet.18693 99.91 True relocation, scaffold gap is present, inconsistency = 18875 88711974 88713137 30846 32009 NC_000014.9 velvet.18693 100.0 True fake: scaffold gap size wrong estimation (local) 88714141 88715673 33801 35333 NC_000014.9 velvet.18693 100.0 True fake: scaffold gap size wrong estimation (local) 88715820 88717503 35913 37635 NC_000014.9 velvet.18693 100.0 True fake: scaffold gap size wrong estimation (local) 88717795 88719137 38509 39851 NC_000014.9 velvet.18693 100.0 True relocation, scaffold gap is present, inconsistency = -29931570 58790287 58791168 42571 43452 NC_000014.9 velvet.18693 99.77 True relocation, scaffold gap is present, inconsistency = 45084619 103875828 103877043 44678 43463 NC_000014.9 velvet.18693 100.0 True relocation, inconsistency = 45100443 58771850 58775384 44679 48263 NC_000014.9 velvet.18693 98.38 True fake: not a misassembly (possible transposable element) 58791704 58793858 48518 50672 NC_000014.9 velvet.18693 99.86 True fake: not a misassembly (possible transposable element) 58776685 58781168 50683 55166 NC_000014.9 velvet.18693 99.93 True fake: not a misassembly (possible transposable element) 58794142 58797562 55177 58597 NC_000014.9 velvet.18693 99.88 True fake: not a misassembly (possible transposable element) 58781552 58782989 58608 60045 NC_000014.9 velvet.18693 99.93 True fake: scaffold gap size wrong estimation (local) 58783037 58790255 60831 68019 NC_000014.9 velvet.18693 99.57 True relocation, scaffold gap is present, inconsistency = 11176 58765041 58771834 75114 68046 NC_000014.9 velvet.18693 99.76 True fake: scaffold gap size wrong estimation (local) 58764108 58764773 76276 75611 NC_000014.9 velvet.18693 99.85 True fake: scaffold gap size wrong estimation (local) 58761765 58763941 79259 77083 NC_000014.9 velvet.18693 99.86 True relocation, scaffold gap is present, inconsistency = -39679279 98438160 98440364 82125 79939 NC_000014.9 velvet.18693 99.0 True fake: scaffold gap size wrong estimation (local) 98434442 98437870 86687 83161 NC_000014.9 velvet.18693 99.94 True relocation, scaffold gap is present, inconsistency = 39599498 58831671 58832690 88941 89960 NC_000014.9 velvet.18693 99.9 True local misassembly 58833246 58833914 90216 90884 NC_000014.9 velvet.18693 98.51 True CONTIG velvet.18693 92878 misassembled CONTIG velvet.18695 417 unaligned 97089972 97090921 950 1 NC_000014.9 velvet.18714 99.89 True CONTIG velvet.18714 950 correct 20661871 20664204 1 2334 NC_000014.9 velvet.18738 99.96 True CONTIG velvet.18738 9424 correct CONTIG velvet.18741 217 unaligned CONTIG velvet.18754 416 unaligned CONTIG velvet.18786 313 unaligned 19420564 19421453 890 1 NC_000014.9 velvet.18794 100.0 True CONTIG velvet.18794 890 correct CONTIG velvet.18812 337 unaligned CONTIG velvet.18817 265 unaligned 62013964 62014518 1 555 NC_000014.9 velvet.18870 100.0 True CONTIG velvet.18870 555 correct CONTIG velvet.18875 481 unaligned 70249073 70249623 3869 3319 NC_000014.9 velvet.18910 99.46 True fake: scaffold gap size wrong estimation (local) 70243870 70244460 10944 10354 NC_000014.9 velvet.18910 99.49 True fake: scaffold gap size wrong estimation (local) 70240243 70241223 15103 14123 NC_000014.9 velvet.18910 99.49 True CONTIG velvet.18910 15103 correct CONTIG velvet.18915 208 unaligned CONTIG velvet.18916 206 unaligned CONTIG velvet.18925 293 unaligned CONTIG velvet.18927 355 unaligned CONTIG velvet.18930 244 unaligned CONTIG velvet.18934 271 unaligned 35054210 35054758 549 1 NC_000014.9 velvet.18945 99.82 True CONTIG velvet.18945 549 correct CONTIG velvet.18949 303 unaligned CONTIG velvet.18969 275 unaligned CONTIG velvet.19012 3822 unaligned CONTIG velvet.19057 313 unaligned 89294795 89295589 3328 2534 NC_000014.9 velvet.19076 100.0 True CONTIG velvet.19076 3328 correct CONTIG velvet.19096 212 unaligned 99868064 99870974 1 2880 NC_000014.9 velvet.19104 98.93 True CONTIG velvet.19104 2880 correct CONTIG velvet.19109 245 unaligned CONTIG velvet.19130 276 unaligned 84096934 84097720 1 787 NC_000014.9 velvet.19149 100.0 True fake: scaffold gap size wrong estimation (local) 84098004 84098872 916 1784 NC_000014.9 velvet.19149 99.88 True CONTIG velvet.19149 1784 correct 91954877 91955961 1 1085 NC_000014.9 velvet.19162 100.0 True CONTIG velvet.19162 1085 correct CONTIG velvet.19166 3621 unaligned CONTIG velvet.19173 210 unaligned CONTIG velvet.19196 217 unaligned CONTIG velvet.19225 440 unaligned CONTIG velvet.19228 228 unaligned 21973913 21974483 571 1 NC_000014.9 velvet.19284 99.82 True CONTIG velvet.19284 571 correct CONTIG velvet.19293 205 unaligned 105563033 105563622 1 590 NC_000014.9 velvet.19313 100.0 True CONTIG velvet.19313 590 correct 69788820 69789689 1 870 NC_000014.9 velvet.19315 99.89 True CONTIG velvet.19315 870 correct CONTIG velvet.19329 283 unaligned 90385308 90386145 1 837 NC_000014.9 velvet.19337 99.64 True CONTIG velvet.19337 837 correct CONTIG velvet.19350 203 unaligned CONTIG velvet.19395 469 unaligned CONTIG velvet.19494 433 unaligned 63169282 63169782 1 501 NC_000014.9 velvet.19505 99.8 True CONTIG velvet.19505 502 correct CONTIG velvet.19507 210 unaligned CONTIG velvet.19511 242 unaligned CONTIG velvet.19533 307 unaligned 49185069 49185717 649 1 NC_000014.9 velvet.19550 99.69 True local misassembly 49185720 49187226 2166 660 NC_000014.9 velvet.19550 100.0 True fake: not a misassembly (possible transposable element) 33720884 33724494 9404 5421 NC_000014.9 velvet.19550 99.64 True fake: not a misassembly (possible transposable element) 49183777 49184953 10754 9578 NC_000014.9 velvet.19550 99.83 True fake: not a misassembly (possible transposable element) 101662129 101664386 10765 13022 NC_000014.9 velvet.19550 99.87 True fake: not a misassembly (possible transposable element) 49150039 49153681 45018 41376 NC_000014.9 velvet.19550 99.86 True relocation, scaffold gap is present, inconsistency = 23833142 72986834 72987338 45029 45533 NC_000014.9 velvet.19550 100.0 True local misassembly 72987438 72988191 45534 46287 NC_000014.9 velvet.19550 98.67 True fake: not a misassembly (possible transposable element) 73012616 73013350 58570 59304 NC_000014.9 velvet.19550 100.0 True fake: not a misassembly (possible transposable element) 73003192 73004742 59732 61241 NC_000014.9 velvet.19550 97.34 True fake: not a misassembly (possible transposable element) 101695572 101698483 61252 64118 NC_000014.9 velvet.19550 98.44 True fake: not a misassembly (possible transposable element) 73005026 73005936 64592 65502 NC_000014.9 velvet.19550 100.0 True fake: scaffold gap size wrong estimation (local) 73006914 73008205 67397 68689 NC_000014.9 velvet.19550 99.85 True fake: scaffold gap size wrong estimation (local) 73008459 73009518 69192 70251 NC_000014.9 velvet.19550 99.81 True relocation, scaffold gap is present, inconsistency = 28691155 101700831 101702170 70409 71748 NC_000014.9 velvet.19550 99.78 True relocation, scaffold gap is present, inconsistency = -55837381 45879605 45880927 86564 87865 NC_000014.9 velvet.19550 98.25 True fake: scaffold gap size wrong estimation (extensive) 45881232 45882499 95375 96642 NC_000014.9 velvet.19550 99.68 True relocation, scaffold gap is present, inconsistency = 55844719 101734993 101736538 104417 105949 NC_000014.9 velvet.19550 99.15 True fake: scaffold gap size wrong estimation (local) 101743326 101744309 106507 107490 NC_000014.9 velvet.19550 100.0 True relocation, scaffold gap is present, inconsistency = -80018302 21746084 21749071 127567 131820 NC_000014.9 velvet.19550 99.8 True relocation, scaffold gap is present, inconsistency = 21682 21785755 21787111 146822 148178 NC_000014.9 velvet.19550 99.63 True fake: scaffold gap size wrong estimation (local) 21789175 21795299 150872 157047 NC_000014.9 velvet.19550 99.0 True relocation, scaffold gap is present, inconsistency = -25976 21772501 21777457 160225 165227 NC_000014.9 velvet.19550 99.65 True fake: scaffold gap size wrong estimation (local) 21777747 21779015 168525 169795 NC_000014.9 velvet.19550 99.69 True fake: scaffold gap size wrong estimation (local) 21779227 21779910 169961 170644 NC_000014.9 velvet.19550 99.85 True fake: scaffold gap size wrong estimation (local) 21780193 21782178 171734 173719 NC_000014.9 velvet.19550 99.85 True fake: scaffold gap size wrong estimation (local) 21782456 21785232 174796 177572 NC_000014.9 velvet.19550 99.86 True fake: scaffold gap size wrong estimation (local) 21815978 21817253 204452 205727 NC_000014.9 velvet.19550 99.61 True fake: scaffold gap size wrong estimation (local) 21818225 21819757 207500 209032 NC_000014.9 velvet.19550 99.93 True fake: scaffold gap size wrong estimation (local) 21849180 21850697 234590 236107 NC_000014.9 velvet.19550 99.93 True relocation, scaffold gap is present, inconsistency = 92094 21753665 21754212 239528 238981 NC_000014.9 velvet.19550 98.91 True fake: scaffold gap size wrong estimation (local) 21752675 21753454 240362 239583 NC_000014.9 velvet.19550 100.0 True fake: scaffold gap size wrong estimation (local) 21749073 21752194 244866 241745 NC_000014.9 velvet.19550 99.94 True relocation, scaffold gap is present, inconsistency = 16851642 38603847 38610032 244877 251062 NC_000014.9 velvet.19550 99.97 True CONTIG velvet.19550 251062 misassembled CONTIG velvet.19579 279 unaligned 92920038 92920618 581 1 NC_000014.9 velvet.19612 100.0 True CONTIG velvet.19612 581 correct CONTIG velvet.19629 241 unaligned CONTIG velvet.19637 330 unaligned CONTIG velvet.19648 295 unaligned CONTIG velvet.19691 287 unaligned CONTIG velvet.19707 247 unaligned CONTIG velvet.19715 262 unaligned CONTIG velvet.19728 212 unaligned CONTIG velvet.19731 213 unaligned 105344208 105344875 318 985 NC_000014.9 velvet.19738 99.85 True CONTIG velvet.19738 985 correct CONTIG velvet.19741 293 unaligned CONTIG velvet.19760 270 unaligned CONTIG velvet.19808 241 unaligned 49390696 49391917 3202 4423 NC_000014.9 velvet.19835 100.0 True CONTIG velvet.19835 4423 correct CONTIG velvet.19849 211 unaligned CONTIG velvet.19862 221 unaligned 19174917 19175870 1 954 NC_000014.9 velvet.19896 100.0 True CONTIG velvet.19896 954 correct CONTIG velvet.19920 247 unaligned CONTIG velvet.19929 370 unaligned CONTIG velvet.19931 350 unaligned CONTIG velvet.19950 243 unaligned CONTIG velvet.19965 283 unaligned CONTIG velvet.19989 415 unaligned CONTIG velvet.19999 325 unaligned 82474568 82475251 1 684 NC_000014.9 velvet.20009 100.0 True CONTIG velvet.20009 684 correct 77840674 77841636 1 961 NC_000014.9 velvet.20030 99.16 True fake: scaffold gap size wrong estimation (local) 77841931 77842449 2390 2908 NC_000014.9 velvet.20030 99.81 True fake: scaffold gap size wrong estimation (local) 77843124 77844115 3005 3996 NC_000014.9 velvet.20030 99.6 True fake: scaffold gap size wrong estimation (local) 77844382 77845495 5625 6738 NC_000014.9 velvet.20030 99.64 True CONTIG velvet.20030 6833 correct CONTIG velvet.20031 322 unaligned 19023556 19025319 1764 1 NC_000014.9 velvet.20036 99.94 True CONTIG velvet.20036 1764 correct 105704611 105705504 894 1 NC_000014.9 velvet.20045 100.0 True CONTIG velvet.20045 894 correct CONTIG velvet.20057 203 unaligned CONTIG velvet.20063 271 unaligned CONTIG velvet.20089 205 unaligned CONTIG velvet.20135 204 unaligned CONTIG velvet.20144 309 unaligned CONTIG velvet.20174 237 unaligned CONTIG velvet.20194 840 unaligned CONTIG velvet.20217 216 unaligned CONTIG velvet.20222 310 unaligned 19634194 19634887 694 1 NC_000014.9 velvet.20265 99.71 True CONTIG velvet.20265 694 correct CONTIG velvet.20285 299 unaligned CONTIG velvet.20302 237 unaligned CONTIG velvet.20333 288 unaligned CONTIG velvet.20399 449 unaligned CONTIG velvet.20444 234 unaligned 39104449 39105281 1 833 NC_000014.9 velvet.20452 99.76 True relocation, scaffold gap is present, inconsistency = -7860 39099443 39100430 2855 3832 NC_000014.9 velvet.20452 98.98 True fake: scaffold gap size wrong estimation (local) 39102234 39104216 6465 8447 NC_000014.9 velvet.20452 99.95 True fake: scaffold gap size wrong estimation (local) 39105993 39106769 10824 11589 NC_000014.9 velvet.20452 98.57 True fake: scaffold gap size wrong estimation (local) 39111435 39112202 16037 16804 NC_000014.9 velvet.20452 100.0 True fake: scaffold gap size wrong estimation (local) 39113149 39115474 18531 20856 NC_000014.9 velvet.20452 99.83 True fake: scaffold gap size wrong estimation (local) 39117291 39118337 24026 25072 NC_000014.9 velvet.20452 98.85 True fake: scaffold gap size wrong estimation (local) 39118890 39120286 26645 28041 NC_000014.9 velvet.20452 100.0 True fake: scaffold gap size wrong estimation (local) 39122024 39123703 30651 32319 NC_000014.9 velvet.20452 99.28 True fake: scaffold gap size wrong estimation (local) 39124962 39125769 34529 35306 NC_000014.9 velvet.20452 95.62 True CONTIG velvet.20452 46747 misassembled CONTIG velvet.20457 329 unaligned 86237741 86240516 3106 6799 NC_000014.9 velvet.20468 99.89 True CONTIG velvet.20468 6799 correct CONTIG velvet.20482 234 unaligned CONTIG velvet.20491 398 unaligned CONTIG velvet.20496 252 unaligned CONTIG velvet.20549 216 unaligned CONTIG velvet.20576 207 unaligned CONTIG velvet.20585 200 unaligned 56928293 56929315 7 1029 NC_000014.9 velvet.20606 100.0 True CONTIG velvet.20606 1029 correct CONTIG velvet.20607 267 unaligned CONTIG velvet.20614 205 unaligned CONTIG velvet.20632 254 unaligned CONTIG velvet.20685 361 unaligned 23216694 23217248 1 604 NC_000014.9 velvet.20704 100.0 True CONTIG velvet.20704 604 correct CONTIG velvet.20708 238 unaligned CONTIG velvet.20713 208 unaligned 35494075 35495346 3163 4415 NC_000014.9 velvet.20716 98.51 True fake: scaffold gap size wrong estimation (local) 35495994 35496687 6285 6978 NC_000014.9 velvet.20716 100.0 True fake: scaffold gap size wrong estimation (local) 35499026 35499588 10548 11110 NC_000014.9 velvet.20716 100.0 True CONTIG velvet.20716 13686 correct CONTIG velvet.20773 331 unaligned CONTIG velvet.20822 247 unaligned 102675048 102676046 1 999 NC_000014.9 velvet.20844 100.0 True CONTIG velvet.20844 999 correct 27444091 27447036 1 2946 NC_000014.9 velvet.20878 99.93 True fake: scaffold gap size wrong estimation (local) 27447375 27448875 4020 5520 NC_000014.9 velvet.20878 100.0 True CONTIG velvet.20878 5520 correct CONTIG velvet.20884 415 unaligned CONTIG velvet.20946 233 unaligned CONTIG velvet.20958 241 unaligned CONTIG velvet.20980 752 unaligned CONTIG velvet.20983 253 unaligned CONTIG velvet.20998 226 unaligned CONTIG velvet.21002 205 unaligned 106430507 106431040 122 655 NC_000014.9 velvet.21034 99.63 True local misassembly 106431145 106431811 656 1322 NC_000014.9 velvet.21034 98.05 True CONTIG velvet.21034 1322 correct CONTIG velvet.21036 499 unaligned 38633122 38634009 224 1154 NC_000014.9 velvet.21087 95.17 True CONTIG velvet.21087 4916 correct_unaligned CONTIG velvet.21097 338 unaligned CONTIG velvet.21124 206 unaligned CONTIG velvet.21127 221 unaligned CONTIG velvet.21138 243 unaligned CONTIG velvet.21157 219 unaligned CONTIG velvet.21199 279 unaligned CONTIG velvet.21201 201 unaligned CONTIG velvet.21238 308 unaligned 58178678 58179209 1 532 NC_000014.9 velvet.21250 100.0 True CONTIG velvet.21250 532 correct CONTIG velvet.21263 372 unaligned CONTIG velvet.21264 276 unaligned CONTIG velvet.21277 200 unaligned CONTIG velvet.21299 268 unaligned CONTIG velvet.21364 214 unaligned CONTIG velvet.21368 393 unaligned CONTIG velvet.21392 213 unaligned CONTIG velvet.21403 352 unaligned 74558360 74559391 3249 2218 NC_000014.9 velvet.21411 99.9 True CONTIG velvet.21411 3817 correct 19645520 19646078 559 1 NC_000014.9 velvet.21415 100.0 True CONTIG velvet.21415 559 correct 94223369 94224034 667 1 NC_000014.9 velvet.21429 99.25 True CONTIG velvet.21429 667 correct CONTIG velvet.21448 294 unaligned CONTIG velvet.21482 380 unaligned CONTIG velvet.21487 380 unaligned CONTIG velvet.21509 206 unaligned CONTIG velvet.21510 267 unaligned CONTIG velvet.21513 326 unaligned CONTIG velvet.21514 206 unaligned CONTIG velvet.21520 267 unaligned CONTIG velvet.21536 444 unaligned CONTIG velvet.21580 329 unaligned CONTIG velvet.21585 290 unaligned CONTIG velvet.21587 294 unaligned CONTIG velvet.21598 207 unaligned CONTIG velvet.21607 212 unaligned CONTIG velvet.21619 304 unaligned CONTIG velvet.21627 243 unaligned 19430278 19431642 1365 1 NC_000014.9 velvet.21672 99.93 True CONTIG velvet.21672 1365 correct CONTIG velvet.21708 331 unaligned CONTIG velvet.21713 242 unaligned CONTIG velvet.21718 432 unaligned CONTIG velvet.21733 319 unaligned CONTIG velvet.21767 227 unaligned CONTIG velvet.21769 266 unaligned CONTIG velvet.21792 318 unaligned CONTIG velvet.21800 235 unaligned CONTIG velvet.21807 345 unaligned CONTIG velvet.21815 219 unaligned 77913923 77915216 1 1294 NC_000014.9 velvet.21851 99.92 True fake: scaffold gap size wrong estimation (local) 77915667 77916667 2214 3214 NC_000014.9 velvet.21851 100.0 True CONTIG velvet.21851 3883 correct CONTIG velvet.21884 296 unaligned 76707995 76708496 1 502 NC_000014.9 velvet.21892 100.0 True CONTIG velvet.21892 502 correct CONTIG velvet.21908 258 unaligned CONTIG velvet.21910 491 unaligned CONTIG velvet.21921 474 unaligned CONTIG velvet.21938 3922 unaligned CONTIG velvet.21946 335 unaligned CONTIG velvet.21958 371 unaligned 61295110 61295873 764 1 NC_000014.9 velvet.21962 99.87 True CONTIG velvet.21962 764 correct CONTIG velvet.21984 208 unaligned 29906497 29908154 172 1829 NC_000014.9 velvet.21987 100.0 True CONTIG velvet.21987 1829 correct 37397212 37398112 991 1 NC_000014.9 velvet.22007 99.75 True relocation, scaffold gap is present, inconsistency = -121706 37510334 37512153 9575 7756 NC_000014.9 velvet.22007 99.95 True local misassembly 37512165 37514604 12025 9586 NC_000014.9 velvet.22007 100.0 True fake: scaffold gap size wrong estimation (local) 37507496 37509891 14409 12036 NC_000014.9 velvet.22007 99.06 True fake: scaffold gap size wrong estimation (local) 37477196 37479798 44601 41999 NC_000014.9 velvet.22007 99.92 True fake: scaffold gap size wrong estimation (local) 37475208 37476888 47448 45768 NC_000014.9 velvet.22007 99.88 True fake: scaffold gap size wrong estimation (local) 37443753 37444696 75066 74123 NC_000014.9 velvet.22007 99.89 True fake: scaffold gap size wrong estimation (local) 37434440 37443395 85420 75642 NC_000014.9 velvet.22007 98.59 True fake: scaffold gap size wrong estimation (local) 37431855 37433100 88700 87455 NC_000014.9 velvet.22007 99.84 True fake: scaffold gap size wrong estimation (local) 37428490 37431559 92927 89814 NC_000014.9 velvet.22007 99.8 True fake: scaffold gap size wrong estimation (local) 37426595 37428298 95581 93878 NC_000014.9 velvet.22007 99.94 True fake: scaffold gap size wrong estimation (local) 37415629 37426334 107278 96438 NC_000014.9 velvet.22007 99.92 True fake: scaffold gap size wrong estimation (local) 37409767 37415338 113962 108396 NC_000014.9 velvet.22007 99.64 True fake: scaffold gap size wrong estimation (local) 37408021 37409503 116221 114728 NC_000014.9 velvet.22007 100.0 True fake: scaffold gap size wrong estimation (local) 37395758 37396548 124135 123345 NC_000014.9 velvet.22007 98.36 True relocation, scaffold gap is present, inconsistency = 11778982 25614087 25615615 125296 126816 NC_000014.9 velvet.22007 99.28 True fake: scaffold gap size wrong estimation (local) 25615893 25621184 127912 133266 NC_000014.9 velvet.22007 99.49 True fake: scaffold gap size wrong estimation (local) 25621380 25623161 134234 136015 NC_000014.9 velvet.22007 99.78 True indel: indel (> 5bp) 25623272 25625792 136144 138664 NC_000014.9 velvet.22007 99.4 True fake: scaffold gap size wrong estimation (local) 25625793 25626415 139123 139745 NC_000014.9 velvet.22007 96.15 True fake: scaffold gap size wrong estimation (local) 25626572 25627636 140298 141362 NC_000014.9 velvet.22007 99.53 True fake: scaffold gap size wrong estimation (local) 25628704 25631120 142655 145071 NC_000014.9 velvet.22007 99.71 True indel: indel (<= 5bp) 25631121 25632151 145073 146103 NC_000014.9 velvet.22007 99.81 True fake: scaffold gap size wrong estimation (extensive) 25632152 25633204 155389 156441 NC_000014.9 velvet.22007 98.1 True fake: scaffold gap size wrong estimation (local) 25633309 25637549 157292 162179 NC_000014.9 velvet.22007 99.98 True relocation, scaffold gap is present, inconsistency = 11740071 37377795 37381549 166108 162354 NC_000014.9 velvet.22007 99.95 True fake: scaffold gap size wrong estimation (local) 37349231 37350858 196345 194718 NC_000014.9 velvet.22007 99.75 True fake: scaffold gap size wrong estimation (local) 37346238 37348796 200146 197588 NC_000014.9 velvet.22007 99.88 True fake: scaffold gap size wrong estimation (local) 37345354 37346053 201582 200883 NC_000014.9 velvet.22007 99.86 True fake: scaffold gap size wrong estimation (local) 37342978 37344981 204253 202250 NC_000014.9 velvet.22007 99.8 True fake: scaffold gap size wrong estimation (local) 37340756 37342078 207372 206050 NC_000014.9 velvet.22007 99.77 True relocation, scaffold gap is present, inconsistency = 23405184 60747273 60747939 207383 208049 NC_000014.9 velvet.22007 99.85 True relocation, scaffold gap is present, inconsistency = -35178599 25569351 25580621 208060 219318 NC_000014.9 velvet.22007 99.74 True relocation, scaffold gap is present, inconsistency = 11901405 37515324 37518410 252616 256108 NC_000014.9 velvet.22007 99.97 True fake: scaffold gap size wrong estimation (local) 37518627 37520949 256932 259254 NC_000014.9 velvet.22007 99.96 True fake: scaffold gap size wrong estimation (local) 37521270 37521818 259897 260445 NC_000014.9 velvet.22007 100.0 True fake: scaffold gap size wrong estimation (local) 37521941 37524569 261106 263734 NC_000014.9 velvet.22007 100.0 True fake: scaffold gap size wrong estimation (local) 37526676 37530834 266514 270672 NC_000014.9 velvet.22007 99.93 True fake: scaffold gap size wrong estimation (local) 37531130 37531699 271766 272335 NC_000014.9 velvet.22007 100.0 True fake: scaffold gap size wrong estimation (local) 37556555 37558038 293717 295200 NC_000014.9 velvet.22007 99.8 True fake: scaffold gap size wrong estimation (local) 37558844 37561632 296894 299661 NC_000014.9 velvet.22007 99.14 True CONTIG velvet.22007 299844 misassembled 67396406 67396991 1 586 NC_000014.9 velvet.22009 100.0 True CONTIG velvet.22009 586 correct CONTIG velvet.22038 314 unaligned 76693146 76694397 1 1252 NC_000014.9 velvet.22039 99.92 True CONTIG velvet.22039 1252 correct CONTIG velvet.22043 292 unaligned 41329690 41330385 3228 3925 NC_000014.9 velvet.22056 99.27 True CONTIG velvet.22056 3925 correct 81460840 81461685 846 1 NC_000014.9 velvet.22063 99.88 True fake: scaffold gap size wrong estimation (local) 81458378 81458888 4279 3769 NC_000014.9 velvet.22063 99.61 True CONTIG velvet.22063 4279 correct 65050553 65051357 805 1 NC_000014.9 velvet.22072 99.88 True fake: scaffold gap size wrong estimation (local) 65049128 65050387 2215 956 NC_000014.9 velvet.22072 100.0 True CONTIG velvet.22072 2215 correct CONTIG velvet.22106 217 unaligned CONTIG velvet.22108 289 unaligned 49584232 49585114 923 1 NC_000014.9 velvet.22109 99.88 True CONTIG velvet.22109 923 correct 26308822 26310221 1 1430 NC_000014.9 velvet.22122 96.09 True CONTIG velvet.22122 4157 correct 102076796 102077701 6798 7703 NC_000014.9 velvet.22139 100.0 True fake: scaffold gap size wrong estimation (local) 102080697 102082674 7714 9693 NC_000014.9 velvet.22139 99.7 True fake: scaffold gap size wrong estimation (local) 102082756 102084252 10063 11630 NC_000014.9 velvet.22139 99.72 True fake: scaffold gap size wrong estimation (local) 102084341 102086685 12344 14691 NC_000014.9 velvet.22139 99.74 True fake: scaffold gap size wrong estimation (local) 102087985 102088911 16802 17728 NC_000014.9 velvet.22139 99.57 True fake: scaffold gap size wrong estimation (local) 102089223 102090467 18266 19510 NC_000014.9 velvet.22139 99.92 True fake: scaffold gap size wrong estimation (local) 102090745 102091371 20493 21119 NC_000014.9 velvet.22139 100.0 True CONTIG velvet.22139 21119 correct CONTIG velvet.22141 232 unaligned CONTIG velvet.22159 255 unaligned CONTIG velvet.22217 206 unaligned CONTIG velvet.22219 288 unaligned CONTIG velvet.22220 280 unaligned CONTIG velvet.22297 205 unaligned CONTIG velvet.22310 477 unaligned 19193713 19196616 1 2904 NC_000014.9 velvet.22330 99.79 True fake: scaffold gap size wrong estimation (local) 19196898 19205226 4012 12341 NC_000014.9 velvet.22330 99.9 True fake: scaffold gap size wrong estimation (local) 19205612 19207703 13471 15604 NC_000014.9 velvet.22330 99.9 True fake: scaffold gap size wrong estimation (local) 19207936 19209949 16472 18539 NC_000014.9 velvet.22330 95.6 True fake: scaffold gap size wrong estimation (local) 19211071 19216689 20610 26969 NC_000014.9 velvet.22330 98.01 True fake: scaffold gap size wrong estimation (local) 19216969 19219197 28059 30287 NC_000014.9 velvet.22330 99.82 True fake: scaffold gap size wrong estimation (local) 19247995 19249030 57880 58909 NC_000014.9 velvet.22330 98.55 True relocation, scaffold gap is present, inconsistency = -25721 19223406 19223972 59006 59572 NC_000014.9 velvet.22330 99.12 True local misassembly 19222081 19223380 59583 60882 NC_000014.9 velvet.22330 99.62 True fake: scaffold gap size wrong estimation (local) 19225649 19227306 64411 66390 NC_000014.9 velvet.22330 99.57 True fake: scaffold gap size wrong estimation (local) 19227525 19229776 67392 69630 NC_000014.9 velvet.22330 99.2 True relocation, scaffold gap is present, inconsistency = 41544990 60779790 60783533 79145 74654 NC_000014.9 velvet.22330 99.95 True fake: scaffold gap size wrong estimation (local) 60777125 60779506 82486 80105 NC_000014.9 velvet.22330 99.92 True fake: scaffold gap size wrong estimation (local) 60773219 60776952 87185 83452 NC_000014.9 velvet.22330 99.79 True fake: scaffold gap size wrong estimation (local) 60769505 60772302 91690 88893 NC_000014.9 velvet.22330 99.89 True relocation, scaffold gap is present, inconsistency = 23415946 37336137 37336804 108445 109112 NC_000014.9 velvet.22330 100.0 True fake: scaffold gap size wrong estimation (local) 37338699 37340469 110193 111963 NC_000014.9 velvet.22330 99.32 True relocation, scaffold gap is present, inconsistency = 23414586 60755442 60758187 115095 112350 NC_000014.9 velvet.22330 99.96 True fake: scaffold gap size wrong estimation (local) 60754625 60755203 116745 116167 NC_000014.9 velvet.22330 99.83 True fake: scaffold gap size wrong estimation (local) 60753036 60754337 118345 117044 NC_000014.9 velvet.22330 100.0 True fake: scaffold gap size wrong estimation (local) 60748274 60750218 121010 119121 NC_000014.9 velvet.22330 97.16 True local misassembly 60750532 60751078 121567 121021 NC_000014.9 velvet.22330 100.0 True local misassembly 60751101 60752764 123244 121578 NC_000014.9 velvet.22330 99.7 True relocation, scaffold gap is present, inconsistency = 24359785 36380610 36387956 126604 134053 NC_000014.9 velvet.22330 99.81 True relocation, scaffold gap is present, inconsistency = 943501 37332168 37336056 134764 138659 NC_000014.9 velvet.22330 99.49 True fake: scaffold gap size wrong estimation (local) 37366439 37371139 167670 172376 NC_000014.9 velvet.22330 99.75 True fake: scaffold gap size wrong estimation (local) 37371307 37372642 173345 174680 NC_000014.9 velvet.22330 100.0 True fake: scaffold gap size wrong estimation (local) 37375176 37377763 177670 180257 NC_000014.9 velvet.22330 99.73 True fake: scaffold gap size wrong estimation (local) 37398130 37407844 198430 208209 NC_000014.9 velvet.22330 99.93 True CONTIG velvet.22330 208220 misassembled CONTIG velvet.22335 212 unaligned 36148609 36149885 173 1449 NC_000014.9 velvet.22345 99.77 True fake: scaffold gap size wrong estimation (local) 36149886 36150941 1854 2909 NC_000014.9 velvet.22345 99.72 True indel: indel (<= 5bp) 36150942 36152069 2911 4038 NC_000014.9 velvet.22345 99.82 True CONTIG velvet.22345 4304 correct CONTIG velvet.22346 303 unaligned CONTIG velvet.22351 285 unaligned 77033794 77034955 1 1162 NC_000014.9 velvet.22382 100.0 True relocation, scaffold gap is present, inconsistency = 23629730 100664887 100673684 1364 10162 NC_000014.9 velvet.22382 99.83 True CONTIG velvet.22382 10162 misassembled CONTIG velvet.22391 317 unaligned CONTIG velvet.22464 201 unaligned CONTIG velvet.22478 391 unaligned 51216548 51217801 1 1255 NC_000014.9 velvet.22529 99.6 True fake: scaffold gap size wrong estimation (local) 51218897 51219576 3263 3942 NC_000014.9 velvet.22529 98.53 True indel: indel (> 5bp) 51219587 51220346 3943 4702 NC_000014.9 velvet.22529 98.55 True fake: scaffold gap size wrong estimation (local) 51220878 51222046 6182 7350 NC_000014.9 velvet.22529 99.83 True CONTIG velvet.22529 7750 correct CONTIG velvet.22543 323 unaligned CONTIG velvet.22549 240 unaligned 106207069 106208764 3359 5006 NC_000014.9 velvet.22572 96.52 True unknown 106209578 106210886 6829 8137 NC_000014.9 velvet.22572 99.69 True unknown CONTIG velvet.22572 9704 mis_unaligned CONTIG velvet.22584 391 unaligned CONTIG velvet.22587 289 unaligned 33383091 33384432 1 1343 NC_000014.9 velvet.22588 99.85 True fake: scaffold gap size wrong estimation (local) 33384719 33391205 2317 8973 NC_000014.9 velvet.22588 99.98 True fake: scaffold gap size wrong estimation (local) 33391494 33410699 10042 29369 NC_000014.9 velvet.22588 99.93 True fake: scaffold gap size wrong estimation (local) 33411485 33412137 30646 31298 NC_000014.9 velvet.22588 100.0 True fake: scaffold gap size wrong estimation (local) 33412420 33421248 32054 41122 NC_000014.9 velvet.22588 99.94 True CONTIG velvet.22588 41122 correct CONTIG velvet.22636 206 unaligned CONTIG velvet.22638 341 unaligned 67045052 67045669 1 618 NC_000014.9 velvet.22646 100.0 True CONTIG velvet.22646 618 correct CONTIG velvet.22649 388 unaligned CONTIG velvet.22651 3802 unaligned 67326097 67326911 1 863 NC_000014.9 velvet.22703 100.0 True CONTIG velvet.22703 872 correct CONTIG velvet.22716 257 unaligned 65729678 65730443 3513 4278 NC_000014.9 velvet.22717 100.0 True local misassembly 65728445 65729056 6698 7309 NC_000014.9 velvet.22717 99.35 True CONTIG velvet.22717 7904 correct CONTIG velvet.22722 284 unaligned CONTIG velvet.22735 236 unaligned 34324159 34325076 1 965 NC_000014.9 velvet.22741 99.35 True fake: scaffold gap size wrong estimation (local) 34325238 34325994 1715 2471 NC_000014.9 velvet.22741 99.6 True CONTIG velvet.22741 2471 correct 64378355 64379430 3973 2900 NC_000014.9 velvet.22763 99.72 True fake: scaffold gap size wrong estimation (local) 64375760 64376729 7300 6287 NC_000014.9 velvet.22763 99.9 True fake: scaffold gap size wrong estimation (local) 64374198 64374993 11183 10363 NC_000014.9 velvet.22763 96.71 True fake: scaffold gap size wrong estimation (local) 64369053 64369886 18813 17981 NC_000014.9 velvet.22763 99.64 True CONTIG velvet.22763 22318 correct 90345834 90346456 623 1 NC_000014.9 velvet.22792 100.0 True CONTIG velvet.22792 3619 correct CONTIG velvet.22806 427 unaligned 30191660 30194868 1 3921 NC_000014.9 velvet.22811 99.91 True fake: scaffold gap size wrong estimation (local) 30220028 30227823 26692 35420 NC_000014.9 velvet.22811 99.9 True CONTIG velvet.22811 35420 correct 36507618 36508443 6 831 NC_000014.9 velvet.22826 99.88 True CONTIG velvet.22826 831 correct CONTIG velvet.22842 249 unaligned CONTIG velvet.22865 214 unaligned CONTIG velvet.22913 246 unaligned CONTIG velvet.22933 284 unaligned 21887069 21887677 1 609 NC_000014.9 velvet.22936 100.0 True indel: indel (> 5bp) 21887761 21888492 610 1341 NC_000014.9 velvet.22936 96.31 True fake: scaffold gap size wrong estimation (local) 21888586 21889215 1482 2111 NC_000014.9 velvet.22936 99.84 True CONTIG velvet.22936 2122 correct CONTIG velvet.22942 266 unaligned 19148050 19149570 1523 3 NC_000014.9 velvet.22955 99.74 True CONTIG velvet.22955 1523 correct CONTIG velvet.22956 243 unaligned CONTIG velvet.22982 258 unaligned CONTIG velvet.23002 207 unaligned CONTIG velvet.23004 449 unaligned CONTIG velvet.23011 431 unaligned CONTIG velvet.23024 209 unaligned 38974694 38975246 3404 2852 NC_000014.9 velvet.23050 99.46 True fake: scaffold gap size wrong estimation (local) 38972481 38974319 6822 4984 NC_000014.9 velvet.23050 99.95 True fake: scaffold gap size wrong estimation (local) 38947200 38949236 27425 24736 NC_000014.9 velvet.23050 98.08 True fake: scaffold gap size wrong estimation (local) 38945482 38947010 29077 27556 NC_000014.9 velvet.23050 99.15 True fake: scaffold gap size wrong estimation (local) 38942772 38945193 32620 30160 NC_000014.9 velvet.23050 99.96 True fake: scaffold gap size wrong estimation (local) 38941295 38942476 34901 33720 NC_000014.9 velvet.23050 99.83 True fake: scaffold gap size wrong estimation (local) 38940545 38941078 35619 35086 NC_000014.9 velvet.23050 99.81 True fake: scaffold gap size wrong estimation (local) 38939642 38940237 39941 39354 NC_000014.9 velvet.23050 98.46 True relocation, scaffold gap is present, inconsistency = 79457 38853327 38856558 43568 46877 NC_000014.9 velvet.23050 97.34 True relocation, scaffold gap is present, inconsistency = -21571 38835129 38841381 47019 53270 NC_000014.9 velvet.23050 99.98 True fake: scaffold gap size wrong estimation (local) 38865262 38871280 74322 80340 NC_000014.9 velvet.23050 99.93 True relocation, scaffold gap is present, inconsistency = -14502 38857117 38857793 80679 81355 NC_000014.9 velvet.23050 100.0 True fake: scaffold gap size wrong estimation (local) 38858430 38865050 82640 89282 NC_000014.9 velvet.23050 99.41 True fake: scaffold gap size wrong estimation (local) 38871396 38877068 89293 94965 NC_000014.9 velvet.23050 99.93 True fake: not a misassembly (possible transposable element) 49716673 49717528 96511 97366 NC_000014.9 velvet.23050 100.0 True fake: not a misassembly (possible transposable element) 38877357 38879910 97377 99930 NC_000014.9 velvet.23050 99.84 True relocation, scaffold gap is present, inconsistency = 19197 38908189 38914386 115270 109012 NC_000014.9 velvet.23050 99.82 True inversion, scaffold gap is present 38898670 38899268 124405 125003 NC_000014.9 velvet.23050 100.0 True fake: scaffold gap size wrong estimation (local) 38899445 38908159 125961 134702 NC_000014.9 velvet.23050 99.65 True relocation, scaffold gap is present, inconsistency = 10841867 49750037 49753553 134713 138230 NC_000014.9 velvet.23050 99.89 True relocation, scaffold gap is present, inconsistency = 10851579 38896940 38898447 139748 138241 NC_000014.9 velvet.23050 100.0 True fake: scaffold gap size wrong estimation (local) 38894793 38896704 142527 140616 NC_000014.9 velvet.23050 100.0 True fake: scaffold gap size wrong estimation (local) 38891187 38894498 146812 143501 NC_000014.9 velvet.23050 100.0 True fake: scaffold gap size wrong estimation (local) 38890080 38890955 148576 147701 NC_000014.9 velvet.23050 98.86 True local misassembly 38888835 38889946 149919 148808 NC_000014.9 velvet.23050 99.82 True fake: scaffold gap size wrong estimation (local) 38883685 38888594 155710 150801 NC_000014.9 velvet.23050 99.94 True fake: scaffold gap size wrong estimation (local) 38880168 38883567 159987 156592 NC_000014.9 velvet.23050 99.74 True relocation, scaffold gap is present, inconsistency = 44255 38927833 38932022 159998 164191 NC_000014.9 velvet.23050 98.76 True fake: scaffold gap size wrong estimation (local) 38933110 38934183 166102 167227 NC_000014.9 velvet.23050 99.7 True relocation, scaffold gap is present, inconsistency = 63838 38846199 38853272 190371 183227 NC_000014.9 velvet.23050 99.86 True fake: scaffold gap size wrong estimation (local) 38844183 38845928 192960 191215 NC_000014.9 velvet.23050 99.94 True fake: scaffold gap size wrong estimation (local) 38841372 38843936 196402 193838 NC_000014.9 velvet.23050 100.0 True fake: scaffold gap size wrong estimation (local) 38832338 38834322 198879 196895 NC_000014.9 velvet.23050 99.9 True fake: scaffold gap size wrong estimation (local) 38815247 38821487 220295 213268 NC_000014.9 velvet.23050 99.86 True fake: scaffold gap size wrong estimation (local) 38813004 38813529 223192 222667 NC_000014.9 velvet.23050 99.62 True relocation, scaffold gap is present, inconsistency = 11915 38790427 38797688 233854 226593 NC_000014.9 velvet.23050 99.97 True relocation, scaffold gap is present, inconsistency = -45108 38831599 38832315 237790 237074 NC_000014.9 velvet.23050 99.72 True fake: scaffold gap size wrong estimation (local) 38828528 38831314 241322 238509 NC_000014.9 velvet.23050 100.0 True fake: scaffold gap size wrong estimation (local) 38823445 38828310 247252 242400 NC_000014.9 velvet.23050 99.42 True indel: indel (> 5bp) 38822041 38823376 248671 247336 NC_000014.9 velvet.23050 99.93 True fake: scaffold gap size wrong estimation (extensive) 38802515 38804838 275694 273371 NC_000014.9 velvet.23050 99.91 True fake: scaffold gap size wrong estimation (local) 38798297 38802285 280659 276671 NC_000014.9 velvet.23050 99.9 True fake: scaffold gap size wrong estimation (extensive) 38788073 38790185 282782 280670 NC_000014.9 velvet.23050 99.95 True relocation, scaffold gap is present, inconsistency = -25453 38808098 38809290 288210 287018 NC_000014.9 velvet.23050 100.0 True fake: scaffold gap size wrong estimation (local) 38806236 38807122 291463 290577 NC_000014.9 velvet.23050 99.89 True fake: scaffold gap size wrong estimation (local) 38784342 38787516 309113 305939 NC_000014.9 velvet.23050 99.97 True relocation, scaffold gap is present, inconsistency = -23375 38805648 38806226 311182 310604 NC_000014.9 velvet.23050 100.0 True fake: scaffold gap size wrong estimation (local) 38781217 38783337 337231 335111 NC_000014.9 velvet.23050 100.0 True fake: scaffold gap size wrong estimation (local) 38780021 38781048 339297 338208 NC_000014.9 velvet.23050 99.8 True fake: scaffold gap size wrong estimation (local) 38768807 38779172 352450 340537 NC_000014.9 velvet.23050 99.89 True relocation, scaffold gap is present, inconsistency = 40877 38721364 38726281 354099 359807 NC_000014.9 velvet.23050 99.86 True CONTIG velvet.23050 359807 misassembled 70468722 70469452 773 43 NC_000014.9 velvet.23053 99.45 True CONTIG velvet.23053 773 correct CONTIG velvet.23059 338 unaligned 42144845 42151195 1253 8442 NC_000014.9 velvet.23108 99.86 True CONTIG velvet.23108 8442 correct CONTIG velvet.23157 231 unaligned CONTIG velvet.23198 233 unaligned CONTIG velvet.23207 339 unaligned 106643422 106643945 526 1 NC_000014.9 velvet.23210 99.43 True CONTIG velvet.23210 526 correct 18696767 18698017 1251 1 NC_000014.9 velvet.23219 99.68 True CONTIG velvet.23219 1251 correct CONTIG velvet.23229 295 unaligned 31011014 31011556 1 543 NC_000014.9 velvet.23240 100.0 True CONTIG velvet.23240 3889 correct CONTIG velvet.23250 254 unaligned CONTIG velvet.23264 216 unaligned CONTIG velvet.23269 201 unaligned CONTIG velvet.23339 591 unaligned CONTIG velvet.23366 399 unaligned CONTIG velvet.23399 229 unaligned 28980175 28981057 17821 16939 NC_000014.9 velvet.23429 100.0 True fake: scaffold gap size wrong estimation (local) 28972457 28980056 25604 18005 NC_000014.9 velvet.23429 99.99 True relocation, scaffold gap is present, inconsistency = -51598003 80563794 80564599 32270 31465 NC_000014.9 velvet.23429 98.51 True local misassembly 80562928 80563514 32857 32271 NC_000014.9 velvet.23429 99.49 True fake: scaffold gap size wrong estimation (local) 80560823 80561872 35775 34726 NC_000014.9 velvet.23429 99.05 True fake: scaffold gap size wrong estimation (local) 80558679 80560156 38972 37495 NC_000014.9 velvet.23429 99.66 True fake: scaffold gap size wrong estimation (local) 80552312 80558279 46444 39981 NC_000014.9 velvet.23429 99.86 True relocation, scaffold gap is present, inconsistency = 51602487 28941285 28946620 54984 49649 NC_000014.9 velvet.23429 100.0 True fake: scaffold gap size wrong estimation (local) 28939896 28940493 57190 56578 NC_000014.9 velvet.23429 95.78 True CONTIG velvet.23429 57252 misassembled 44059070 44065317 1 6720 NC_000014.9 velvet.23436 99.92 True CONTIG velvet.23436 6720 correct 106055838 106056819 1 982 NC_000014.9 velvet.23464 99.29 True CONTIG velvet.23464 33298 correct CONTIG velvet.23468 334 unaligned CONTIG velvet.23484 200 unaligned CONTIG velvet.23494 215 unaligned CONTIG velvet.23499 385 unaligned CONTIG velvet.23504 224 unaligned CONTIG velvet.23511 221 unaligned CONTIG velvet.23574 363 unaligned 106372400 106372961 77 638 NC_000014.9 velvet.23576 98.22 True CONTIG velvet.23576 638 correct 94074045 94076405 2577 217 NC_000014.9 velvet.23587 100.0 True relocation, scaffold gap is present, inconsistency = 27765254 66295204 66296629 16243 14739 NC_000014.9 velvet.23587 97.32 True fake: scaffold gap size wrong estimation (local) 66290604 66295005 21719 17271 NC_000014.9 velvet.23587 100.0 True fake: scaffold gap size wrong estimation (local) 66287869 66289196 25086 23767 NC_000014.9 velvet.23587 99.39 True fake: scaffold gap size wrong estimation (local) 66250819 66257675 58965 52109 NC_000014.9 velvet.23587 100.0 True relocation, scaffold gap is present, inconsistency = 1404327 67670077 67670657 67040 67620 NC_000014.9 velvet.23587 99.83 True fake: scaffold gap size wrong estimation (local) 67674895 67675867 73681 74625 NC_000014.9 velvet.23587 97.09 True fake: scaffold gap size wrong estimation (local) 67702247 67702913 98797 99463 NC_000014.9 velvet.23587 98.35 True fake: scaffold gap size wrong estimation (local) 67703021 67703723 99718 100420 NC_000014.9 velvet.23587 100.0 True fake: scaffold gap size wrong estimation (local) 67703978 67706360 101391 103773 NC_000014.9 velvet.23587 99.96 True CONTIG velvet.23587 104695 misassembled CONTIG velvet.23590 443 unaligned CONTIG velvet.23618 203 unaligned CONTIG velvet.23634 301 unaligned CONTIG velvet.23680 254 unaligned 52279869 52280398 1 530 NC_000014.9 velvet.23735 100.0 True CONTIG velvet.23735 530 correct CONTIG velvet.23737 241 unaligned CONTIG velvet.23751 367 unaligned 91256626 91259352 1 2727 NC_000014.9 velvet.23758 99.96 True fake: scaffold gap size wrong estimation (local) 91259639 91260578 3904 4843 NC_000014.9 velvet.23758 100.0 True local misassembly 91260793 91261721 4844 5772 NC_000014.9 velvet.23758 98.92 True CONTIG velvet.23758 6374 correct CONTIG velvet.23771 280 unaligned CONTIG velvet.23799 466 unaligned CONTIG velvet.23808 390 unaligned 106478486 106479118 633 1 NC_000014.9 velvet.23821 99.84 True CONTIG velvet.23821 633 correct CONTIG velvet.23826 201 unaligned CONTIG velvet.23868 221 unaligned 74537161 74537772 1 612 NC_000014.9 velvet.23897 99.84 True CONTIG velvet.23897 612 correct CONTIG velvet.23907 397 unaligned CONTIG velvet.23940 510 unaligned CONTIG velvet.23969 289 unaligned 79393041 79393595 1 555 NC_000014.9 velvet.24006 100.0 True CONTIG velvet.24006 555 correct 34871878 34872511 3445 4078 NC_000014.9 velvet.24022 99.53 True local misassembly 34872937 34873780 4079 4922 NC_000014.9 velvet.24022 98.82 True CONTIG velvet.24022 4922 correct CONTIG velvet.24033 409 unaligned 65713433 65714079 1 663 NC_000014.9 velvet.24055 99.38 True CONTIG velvet.24055 679 correct CONTIG velvet.24111 226 unaligned 71776338 71778158 1 1821 NC_000014.9 velvet.24116 100.0 True CONTIG velvet.24116 1821 correct 90111042 90112923 2047 3928 NC_000014.9 velvet.24134 99.95 True CONTIG velvet.24134 3928 correct 85818519 85819198 686 1 NC_000014.9 velvet.24150 97.68 True CONTIG velvet.24150 698 correct 50211033 50211629 597 1 NC_000014.9 velvet.24167 100.0 True CONTIG velvet.24167 1183 correct CONTIG velvet.24221 327 unaligned CONTIG velvet.24243 208 unaligned CONTIG velvet.24245 238 unaligned 39352200 39353617 1418 1 NC_000014.9 velvet.24323 99.93 True relocation, scaffold gap is present, inconsistency = 32573 39405151 39408027 20379 23242 NC_000014.9 velvet.24323 99.41 True fake: scaffold gap size wrong estimation (local) 39408758 39411121 24792 27155 NC_000014.9 velvet.24323 99.53 True relocation, scaffold gap is present, inconsistency = 79045 39322541 39324594 34327 32274 NC_000014.9 velvet.24323 99.95 True CONTIG velvet.24323 36155 misassembled CONTIG velvet.24326 396 unaligned CONTIG velvet.24342 394 unaligned CONTIG velvet.24376 211 unaligned CONTIG velvet.24397 253 unaligned CONTIG velvet.24411 345 unaligned CONTIG velvet.24454 248 unaligned CONTIG velvet.24509 3837 unaligned 44440141 44440665 525 1 NC_000014.9 velvet.24527 100.0 True CONTIG velvet.24527 525 correct CONTIG velvet.24556 486 unaligned CONTIG velvet.24597 263 unaligned 50151131 50151863 733 1 NC_000014.9 velvet.24620 99.86 True CONTIG velvet.24620 733 correct 60607707 60608249 1 543 NC_000014.9 velvet.24621 100.0 True CONTIG velvet.24621 543 correct 53279988 53280504 1 517 NC_000014.9 velvet.24670 99.81 True CONTIG velvet.24670 517 correct CONTIG velvet.24723 204 unaligned CONTIG velvet.24751 545 unaligned CONTIG velvet.24756 234 unaligned 62091565 62092200 1 636 NC_000014.9 velvet.24789 100.0 True CONTIG velvet.24789 636 correct CONTIG velvet.24817 212 unaligned 77938171 77939253 1 1083 NC_000014.9 velvet.24838 100.0 True CONTIG velvet.24838 1083 correct 33302913 33303929 1 1020 NC_000014.9 velvet.24841 99.61 True CONTIG velvet.24841 1020 correct CONTIG velvet.24856 200 unaligned CONTIG velvet.24864 293 unaligned CONTIG velvet.24894 232 unaligned CONTIG velvet.24919 252 unaligned 50643566 50646433 1 3252 NC_000014.9 velvet.24934 99.79 True fake: scaffold gap size wrong estimation (local) 50646711 50648523 4014 5826 NC_000014.9 velvet.24934 99.78 True fake: scaffold gap size wrong estimation (local) 50651071 50651662 8970 9561 NC_000014.9 velvet.24934 99.83 True local misassembly 50651821 50652777 9562 10518 NC_000014.9 velvet.24934 96.34 True CONTIG velvet.24934 10518 correct CONTIG velvet.24951 277 unaligned CONTIG velvet.24957 293 unaligned CONTIG velvet.24982 272 unaligned CONTIG velvet.25020 338 unaligned CONTIG velvet.25024 322 unaligned 105075341 105078594 1 3218 NC_000014.9 velvet.25063 96.78 True fake: scaffold gap size wrong estimation (local) 105080089 105080733 5369 6013 NC_000014.9 velvet.25063 99.84 True CONTIG velvet.25063 9354 correct CONTIG velvet.25075 318 unaligned CONTIG velvet.25113 484 unaligned CONTIG velvet.25119 456 unaligned 105214520 105215644 1 1125 NC_000014.9 velvet.25144 99.91 True CONTIG velvet.25144 1125 correct 91086195 91086797 1 603 NC_000014.9 velvet.25147 100.0 True CONTIG velvet.25147 1050 correct CONTIG velvet.25168 280 unaligned 99102098 99102727 1 630 NC_000014.9 velvet.25211 100.0 True CONTIG velvet.25211 1371 correct CONTIG velvet.25231 3684 unaligned CONTIG velvet.25262 1021 unaligned CONTIG velvet.25267 201 unaligned CONTIG velvet.25288 207 unaligned CONTIG velvet.25307 284 unaligned CONTIG velvet.25314 348 unaligned CONTIG velvet.25347 353 unaligned CONTIG velvet.25354 225 unaligned CONTIG velvet.25372 397 unaligned CONTIG velvet.25374 411 unaligned CONTIG velvet.25390 346 unaligned CONTIG velvet.25404 349 unaligned CONTIG velvet.25421 212 unaligned CONTIG velvet.25422 403 unaligned CONTIG velvet.25440 410 unaligned 59906099 59907917 1 1818 NC_000014.9 velvet.25448 99.84 True fake: scaffold gap size wrong estimation (local) 59909945 59913919 4390 8364 NC_000014.9 velvet.25448 99.9 True CONTIG velvet.25448 8364 correct CONTIG velvet.25454 309 unaligned 105685857 105687050 1194 1 NC_000014.9 velvet.25467 99.66 True CONTIG velvet.25467 1194 correct CONTIG velvet.25474 222 unaligned CONTIG velvet.25498 215 unaligned CONTIG velvet.25506 238 unaligned CONTIG velvet.25514 204 unaligned CONTIG velvet.25541 627 unaligned CONTIG velvet.25544 334 unaligned 83865119 83866278 1 1160 NC_000014.9 velvet.25549 99.91 True fake: scaffold gap size wrong estimation (local) 83866458 83869344 1849 4735 NC_000014.9 velvet.25549 99.9 True fake: scaffold gap size wrong estimation (local) 83869671 83872612 5856 8797 NC_000014.9 velvet.25549 99.97 True CONTIG velvet.25549 9374 correct 48808307 48812864 4558 1 NC_000014.9 velvet.25559 99.93 True CONTIG velvet.25559 5593 correct 19176126 19176753 628 1 NC_000014.9 velvet.25561 99.68 True CONTIG velvet.25561 628 correct CONTIG velvet.25599 236 unaligned CONTIG velvet.25606 464 unaligned CONTIG velvet.25607 215 unaligned CONTIG velvet.25623 237 unaligned CONTIG velvet.25667 246 unaligned CONTIG velvet.25679 471 unaligned CONTIG velvet.25684 228 unaligned CONTIG velvet.25687 276 unaligned CONTIG velvet.25692 252 unaligned CONTIG velvet.25695 377 unaligned CONTIG velvet.25733 374 unaligned CONTIG velvet.25738 213 unaligned CONTIG velvet.25758 290 unaligned 66456591 66457834 1 1273 NC_000014.9 velvet.25858 95.98 True CONTIG velvet.25858 1273 correct 34836397 34837006 1 610 NC_000014.9 velvet.25866 100.0 True CONTIG velvet.25866 610 correct CONTIG velvet.25869 3960 unaligned CONTIG velvet.25902 215 unaligned CONTIG velvet.25912 244 unaligned CONTIG velvet.25930 276 unaligned CONTIG velvet.25931 210 unaligned CONTIG velvet.25934 279 unaligned CONTIG velvet.25946 358 unaligned CONTIG velvet.25962 238 unaligned 94611160 94611675 516 1 NC_000014.9 velvet.25977 100.0 True CONTIG velvet.25977 3665 correct 85395346 85395936 1 591 NC_000014.9 velvet.26001 99.83 True CONTIG velvet.26001 591 correct CONTIG velvet.26010 200 unaligned CONTIG velvet.26025 257 unaligned 64570482 64571139 1 658 NC_000014.9 velvet.26041 99.85 True CONTIG velvet.26041 658 correct CONTIG velvet.26046 225 unaligned CONTIG velvet.26050 249 unaligned CONTIG velvet.26071 485 unaligned CONTIG velvet.26076 253 unaligned CONTIG velvet.26105 235 unaligned 35790685 35791343 953 295 NC_000014.9 velvet.26147 100.0 True CONTIG velvet.26147 4401 correct CONTIG velvet.26175 275 unaligned CONTIG velvet.26220 242 unaligned 97689210 97689779 1 570 NC_000014.9 velvet.26234 99.82 True CONTIG velvet.26234 570 correct CONTIG velvet.26269 268 unaligned CONTIG velvet.26289 244 unaligned CONTIG velvet.26304 222 unaligned CONTIG velvet.26325 419 unaligned 26231637 26232412 1 776 NC_000014.9 velvet.26340 99.87 True CONTIG velvet.26340 776 correct 57129363 57130124 636 1397 NC_000014.9 velvet.26411 99.74 True CONTIG velvet.26411 1622 correct CONTIG velvet.26423 895 unaligned 49442814 49443803 1 990 NC_000014.9 velvet.26425 99.9 True CONTIG velvet.26425 990 correct CONTIG velvet.26448 345 unaligned 19337077 19337665 589 1 NC_000014.9 velvet.26463 99.83 True CONTIG velvet.26463 600 correct CONTIG velvet.26480 260 unaligned 30510544 30511102 1 559 NC_000014.9 velvet.26489 100.0 True indel: indel (<= 5bp) 30511107 30512046 560 1499 NC_000014.9 velvet.26489 99.89 True fake: scaffold gap size wrong estimation (local) 30512047 30514171 2811 4935 NC_000014.9 velvet.26489 99.86 True CONTIG velvet.26489 5474 correct CONTIG velvet.26491 3853 unaligned CONTIG velvet.26499 241 unaligned CONTIG velvet.26545 225 unaligned CONTIG velvet.26567 294 unaligned CONTIG velvet.26571 314 unaligned CONTIG velvet.26585 270 unaligned 65130109 65130773 361 1025 NC_000014.9 velvet.26587 100.0 True CONTIG velvet.26587 1025 correct CONTIG velvet.26633 402 unaligned 65585456 65586937 1 1482 NC_000014.9 velvet.26653 100.0 True CONTIG velvet.26653 1482 correct 53561650 53562521 872 1 NC_000014.9 velvet.26654 99.77 True fake: scaffold gap size wrong estimation (local) 53559013 53559892 4423 3544 NC_000014.9 velvet.26654 100.0 True CONTIG velvet.26654 4423 correct CONTIG velvet.26673 234 unaligned 106484166 106484689 1 524 NC_000014.9 velvet.26695 100.0 True CONTIG velvet.26695 524 correct CONTIG velvet.26705 215 unaligned CONTIG velvet.26706 222 unaligned CONTIG velvet.26711 204 unaligned CONTIG velvet.26745 246 unaligned 76799908 76800726 1 819 NC_000014.9 velvet.26762 100.0 True CONTIG velvet.26762 1022 correct CONTIG velvet.26784 261 unaligned CONTIG velvet.26788 348 unaligned CONTIG velvet.26809 204 unaligned 76987670 76988530 1 861 NC_000014.9 velvet.26842 99.88 True fake: scaffold gap size wrong estimation (local) 76990118 76990859 3396 4118 NC_000014.9 velvet.26842 96.82 True CONTIG velvet.26842 4118 correct CONTIG velvet.26856 271 unaligned CONTIG velvet.26875 228 unaligned CONTIG velvet.26941 205 unaligned CONTIG velvet.26942 283 unaligned CONTIG velvet.26947 231 unaligned 59945148 59946515 1385 18 NC_000014.9 velvet.26962 99.93 True CONTIG velvet.26962 1385 correct CONTIG velvet.26983 225 unaligned 62982311 62983221 1 911 NC_000014.9 velvet.26990 100.0 True fake: scaffold gap size wrong estimation (local) 62983410 62992291 1592 10567 NC_000014.9 velvet.26990 98.83 True fake: scaffold gap size wrong estimation (local) 62992670 62997682 11700 16712 NC_000014.9 velvet.26990 99.98 True fake: scaffold gap size wrong estimation (local) 62997933 62999005 17632 18704 NC_000014.9 velvet.26990 99.81 True fake: scaffold gap size wrong estimation (local) 62999919 63000838 19738 20657 NC_000014.9 velvet.26990 100.0 True fake: scaffold gap size wrong estimation (local) 63000988 63003471 21529 24012 NC_000014.9 velvet.26990 99.96 True fake: scaffold gap size wrong estimation (extensive) 63011511 63016072 24023 28584 NC_000014.9 velvet.26990 100.0 True CONTIG velvet.26990 28584 correct CONTIG velvet.27004 282 unaligned CONTIG velvet.27048 212 unaligned CONTIG velvet.27052 40275 unaligned CONTIG velvet.27058 326 unaligned CONTIG velvet.27070 476 unaligned 34076833 34077400 1 568 NC_000014.9 velvet.27138 99.82 True CONTIG velvet.27138 568 correct CONTIG velvet.27143 332 unaligned CONTIG velvet.27149 316 unaligned 30175793 30176617 856 1 NC_000014.9 velvet.27150 95.33 True CONTIG velvet.27150 856 correct CONTIG velvet.27164 225 unaligned CONTIG velvet.27166 352 unaligned CONTIG velvet.27245 391 unaligned 102905092 102912902 7811 1 NC_000014.9 velvet.27246 99.96 True relocation, scaffold gap is present, inconsistency = 16305255 86595875 86596481 11167 11774 NC_000014.9 velvet.27246 99.84 True relocation, scaffold gap is present, inconsistency = 16296898 102893390 102894044 12439 11785 NC_000014.9 velvet.27246 100.0 True relocation, scaffold gap is present, inconsistency = -11154 102901372 102904522 15611 12461 NC_000014.9 velvet.27246 99.97 True relocation, scaffold gap is present, inconsistency = 16292927 86598841 86608434 15622 25237 NC_000014.9 velvet.27246 98.81 True fake: scaffold gap size wrong estimation (local) 86611908 86619593 30512 38360 NC_000014.9 velvet.27246 99.96 True fake: scaffold gap size wrong estimation (local) 86619754 86624753 39314 44419 NC_000014.9 velvet.27246 99.25 True fake: scaffold gap size wrong estimation (local) 86625851 86628249 46430 48813 NC_000014.9 velvet.27246 98.63 True fake: scaffold gap size wrong estimation (local) 86634093 86635897 48824 50619 NC_000014.9 velvet.27246 99.5 True relocation, scaffold gap is present, inconsistency = -8332 86628664 86634089 51718 57222 NC_000014.9 velvet.27246 99.89 True fake: scaffold gap size wrong estimation (local) 86636518 86637088 60319 60889 NC_000014.9 velvet.27246 100.0 True indel: indel (> 5bp) 86637136 86637952 60967 61783 NC_000014.9 velvet.27246 99.27 True fake: scaffold gap size wrong estimation (local) 86638165 86640638 62582 65099 NC_000014.9 velvet.27246 98.13 True fake: scaffold gap size wrong estimation (local) 86641265 86641905 66297 66938 NC_000014.9 velvet.27246 99.84 True relocation, scaffold gap is present, inconsistency = 6683177 79957581 79958077 67449 66949 NC_000014.9 velvet.27246 98.2 True fake: scaffold gap size wrong estimation (local) 79955472 79956219 68775 68028 NC_000014.9 velvet.27246 99.73 True indel: indel (> 5bp) 79954910 79955471 69345 68784 NC_000014.9 velvet.27246 97.51 True local misassembly 79953988 79954772 70130 69346 NC_000014.9 velvet.27246 99.87 True relocation, scaffold gap is present, inconsistency = 6686706 86641919 86648253 70571 76905 NC_000014.9 velvet.27246 99.97 True fake: scaffold gap size wrong estimation (local) 86648613 86651375 78081 80801 NC_000014.9 velvet.27246 98.07 True fake: scaffold gap size wrong estimation (local) 86651562 86655680 81357 85910 NC_000014.9 velvet.27246 100.0 True fake: scaffold gap size wrong estimation (local) 86655826 86660158 86716 91048 NC_000014.9 velvet.27246 99.93 True fake: scaffold gap size wrong estimation (local) 86660310 86660953 91709 92352 NC_000014.9 velvet.27246 100.0 True fake: scaffold gap size wrong estimation (local) 86664766 86666030 92363 93628 NC_000014.9 velvet.27246 99.6 True fake: scaffold gap size wrong estimation (local) 86666119 86668526 94355 96761 NC_000014.9 velvet.27246 99.83 True relocation, inconsistency = 6740264 79921860 79925675 100757 96941 NC_000014.9 velvet.27246 99.84 True fake: scaffold gap size wrong estimation (local) 79918415 79921751 104979 101643 NC_000014.9 velvet.27246 99.94 True fake: scaffold gap size wrong estimation (local) 79906604 79918129 117552 106027 NC_000014.9 velvet.27246 99.99 True fake: scaffold gap size wrong estimation (local) 79903346 79905860 121510 118996 NC_000014.9 velvet.27246 100.0 True fake: scaffold gap size wrong estimation (local) 79891932 79893527 127973 126378 NC_000014.9 velvet.27246 99.87 True fake: scaffold gap size wrong estimation (local) 79885328 79891608 135453 129173 NC_000014.9 velvet.27246 99.89 True relocation, scaffold gap is present, inconsistency = -9398 79893832 79894715 136347 135464 NC_000014.9 velvet.27246 100.0 True fake: scaffold gap size wrong estimation (local) 79880159 79885169 144305 139291 NC_000014.9 velvet.27246 99.22 True fake: scaffold gap size wrong estimation (local) 79877734 79880017 147491 145208 NC_000014.9 velvet.27246 99.56 True fake: scaffold gap size wrong estimation (local) 79876969 79877510 148494 147953 NC_000014.9 velvet.27246 99.82 True relocation, scaffold gap is present, inconsistency = 6783450 86660971 86664527 148505 152061 NC_000014.9 velvet.27246 99.89 True fake: scaffold gap size wrong estimation (local) 86668702 86674863 152352 159407 NC_000014.9 velvet.27246 99.72 True relocation, scaffold gap is present, inconsistency = 6804909 79828654 79844533 194990 178667 NC_000014.9 velvet.27246 99.58 True relocation, scaffold gap is present, inconsistency = -12182992 92007282 92010256 199852 196380 NC_000014.9 velvet.27246 100.0 True fake: scaffold gap size wrong estimation (local) 92002855 92006641 205032 201246 NC_000014.9 velvet.27246 99.97 True fake: scaffold gap size wrong estimation (local) 92001129 92002547 207422 206004 NC_000014.9 velvet.27246 100.0 True fake: scaffold gap size wrong estimation (local) 91996000 92000844 213303 208339 NC_000014.9 velvet.27246 99.96 True fake: scaffold gap size wrong estimation (local) 91979263 91979961 224756 224058 NC_000014.9 velvet.27246 99.86 True relocation, scaffold gap is present, inconsistency = -12546 91984587 91991798 232052 224767 NC_000014.9 velvet.27246 99.93 True fake: scaffold gap size wrong estimation (local) 91981964 91984286 235461 233139 NC_000014.9 velvet.27246 99.96 True fake: scaffold gap size wrong estimation (local) 91979983 91980983 238256 237256 NC_000014.9 velvet.27246 100.0 True relocation, scaffold gap is present, inconsistency = 20554154 71414388 71415702 249697 248383 NC_000014.9 velvet.27246 100.0 True relocation, scaffold gap is present, inconsistency = -14276 71412376 71413459 265985 264902 NC_000014.9 velvet.27246 99.91 True local misassembly 71407681 71412375 271506 266812 NC_000014.9 velvet.27246 100.0 True relocation, scaffold gap is present, inconsistency = -20550725 91956218 91958395 273694 271517 NC_000014.9 velvet.27246 99.95 True local misassembly 91959647 91960237 274295 273705 NC_000014.9 velvet.27246 98.31 True local misassembly 91958642 91959429 275083 274296 NC_000014.9 velvet.27246 100.0 True local misassembly 91961433 91962732 276548 275249 NC_000014.9 velvet.27246 100.0 True relocation, scaffold gap is present, inconsistency = 34973252 56987307 56988170 276559 277422 NC_000014.9 velvet.27246 99.65 True relocation, scaffold gap is present, inconsistency = 34960723 91949810 91951082 279611 278339 NC_000014.9 velvet.27246 99.92 True fake: scaffold gap size wrong estimation (local) 91948294 91949354 281829 280769 NC_000014.9 velvet.27246 99.91 True indel: indel (<= 5bp) 91946512 91948293 283614 281833 NC_000014.9 velvet.27246 99.49 True fake: scaffold gap size wrong estimation (local) 91945229 91946263 286904 285870 NC_000014.9 velvet.27246 100.0 True fake: scaffold gap size wrong estimation (local) 91944214 91944957 287968 287225 NC_000014.9 velvet.27246 100.0 True fake: scaffold gap size wrong estimation (local) 91943477 91944046 288873 288304 NC_000014.9 velvet.27246 100.0 True relocation, scaffold gap is present, inconsistency = 34952553 56989438 56990913 288884 290359 NC_000014.9 velvet.27246 99.73 True relocation, scaffold gap is present, inconsistency = 8456 56976896 56979512 294445 291829 NC_000014.9 velvet.27246 99.85 True relocation, scaffold gap is present, inconsistency = -34970995 91925133 91928500 317203 313836 NC_000014.9 velvet.27246 99.94 True relocation, scaffold gap is present, inconsistency = 34912441 57006019 57010677 319218 324063 NC_000014.9 velvet.27246 99.94 True relocation, scaffold gap is present, inconsistency = -14955 56996515 56999649 324856 328079 NC_000014.9 velvet.27246 99.9 True relocation, scaffold gap is present, inconsistency = 34932815 91939615 91943388 339030 335230 NC_000014.9 velvet.27246 99.18 True fake: scaffold gap size wrong estimation (local) 91938450 91939324 340680 339806 NC_000014.9 velvet.27246 100.0 True fake: scaffold gap size wrong estimation (local) 91934091 91938170 345590 341511 NC_000014.9 velvet.27246 99.98 True fake: scaffold gap size wrong estimation (local) 91929100 91933283 351420 347237 NC_000014.9 velvet.27246 99.98 True fake: scaffold gap size wrong estimation (local) 91922337 91924411 353505 351431 NC_000014.9 velvet.27246 99.9 True fake: scaffold gap size wrong estimation (local) 91919409 91922035 357195 354570 NC_000014.9 velvet.27246 99.85 True fake: not a misassembly (possible transposable element) 56999699 57005761 357290 364103 NC_000014.9 velvet.27246 99.9 True fake: not a misassembly (possible transposable element) 91917591 91919071 365765 364285 NC_000014.9 velvet.27246 99.8 True fake: scaffold gap size wrong estimation (local) 91916421 91917290 367187 366318 NC_000014.9 velvet.27246 100.0 True fake: scaffold gap size wrong estimation (local) 91912797 91914074 371637 370360 NC_000014.9 velvet.27246 100.0 True fake: scaffold gap size wrong estimation (local) 91911259 91912220 373873 372868 NC_000014.9 velvet.27246 100.0 True fake: scaffold gap size wrong estimation (local) 91906143 91908885 379456 376714 NC_000014.9 velvet.27246 99.85 True fake: scaffold gap size wrong estimation (local) 91904520 91905597 381802 380725 NC_000014.9 velvet.27246 96.85 True fake: scaffold gap size wrong estimation (local) 91902243 91904519 384197 381921 NC_000014.9 velvet.27246 97.89 True fake: scaffold gap size wrong estimation (local) 91899057 91902242 388197 385012 NC_000014.9 velvet.27246 99.69 True local misassembly 91888634 91894112 393676 388198 NC_000014.9 velvet.27246 99.78 True relocation, scaffold gap is present, inconsistency = 34848482 57037271 57040141 393687 396609 NC_000014.9 velvet.27246 99.79 True relocation, scaffold gap is present, inconsistency = 34767654 91808080 91809228 396894 398042 NC_000014.9 velvet.27246 100.0 True fake: scaffold gap size wrong estimation (local) 91809419 91819218 398213 409046 NC_000014.9 velvet.27246 99.02 True fake: scaffold gap size wrong estimation (local) 91819319 91822742 409744 413449 NC_000014.9 velvet.27246 99.85 True fake: scaffold gap size wrong estimation (local) 91823545 91825038 415042 416535 NC_000014.9 velvet.27246 99.93 True relocation, scaffold gap is present, inconsistency = -68703809 23127784 23132021 423090 427327 NC_000014.9 velvet.27246 100.0 True relocation, scaffold gap is present, inconsistency = 68743029 91875097 91876874 429151 427374 NC_000014.9 velvet.27246 100.0 True fake: scaffold gap size wrong estimation (local) 91865011 91871609 436831 429380 NC_000014.9 velvet.27246 99.8 True fake: scaffold gap size wrong estimation (local) 91862348 91864772 439402 436935 NC_000014.9 velvet.27246 99.42 True relocation, scaffold gap is present, inconsistency = 68721246 23135732 23141091 439413 444838 NC_000014.9 velvet.27246 98.6 True fake: scaffold gap size wrong estimation (local) 23141754 23142739 445782 446766 NC_000014.9 velvet.27246 99.9 True fake: scaffold gap size wrong estimation (local) 23144434 23144945 449342 449853 NC_000014.9 velvet.27246 100.0 True relocation, scaffold gap is present, inconsistency = 68726303 91871856 91874889 453490 450461 NC_000014.9 velvet.27246 99.67 True relocation, scaffold gap is present, inconsistency = 34808064 57057182 57062902 454380 460100 NC_000014.9 velvet.27246 99.98 True fake: scaffold gap size wrong estimation (local) 57063031 57069487 460892 467878 NC_000014.9 velvet.27246 100.0 True relocation, scaffold gap is present, inconsistency = 33908573 23148498 23151736 473838 470600 NC_000014.9 velvet.27246 99.94 True fake: scaffold gap size wrong estimation (local) 23145548 23148214 477650 474981 NC_000014.9 velvet.27246 99.7 True inversion, scaffold gap is present 23142802 23144361 477661 479220 NC_000014.9 velvet.27246 99.94 True relocation, scaffold gap is present, inconsistency = 62449667 85594039 85597627 482818 479231 NC_000014.9 velvet.27246 99.94 True relocation, scaffold gap is present, inconsistency = -6258095 91851512 91852110 483440 482842 NC_000014.9 velvet.27246 99.83 True relocation, scaffold gap is present, inconsistency = 68628289 23221265 23222565 484098 485398 NC_000014.9 velvet.27246 99.85 True relocation, scaffold gap is present, inconsistency = 60955 23159258 23160299 486450 485409 NC_000014.9 velvet.27246 99.9 True inversion, scaffold gap is present 23158646 23159256 486461 487071 NC_000014.9 velvet.27246 100.0 True fake: scaffold gap size wrong estimation (local) 23160589 23161521 488513 489550 NC_000014.9 velvet.27246 100.0 True fake: scaffold gap size wrong estimation (local) 23161956 23164622 490596 494015 NC_000014.9 velvet.27246 99.92 True relocation, scaffold gap is present, inconsistency = 68682462 91847292 91849785 494223 496716 NC_000014.9 velvet.27246 99.92 True fake: scaffold gap size wrong estimation (local) 91850941 91851510 498435 499004 NC_000014.9 velvet.27246 99.3 True fake: scaffold gap size wrong estimation (local) 91853107 91856248 500852 504958 NC_000014.9 velvet.27246 99.86 True fake: scaffold gap size wrong estimation (local) 91856519 91858119 505749 507349 NC_000014.9 velvet.27246 99.94 True fake: scaffold gap size wrong estimation (local) 91858284 91861679 508150 511670 NC_000014.9 velvet.27246 99.94 True relocation, scaffold gap is present, inconsistency = 8983 91845247 91846972 515724 513999 NC_000014.9 velvet.27246 99.88 True relocation, scaffold gap is present, inconsistency = 68652562 23165023 23169102 539307 543533 NC_000014.9 velvet.27246 99.75 True relocation, scaffold gap is present, inconsistency = 20412 23196737 23197272 550756 551291 NC_000014.9 velvet.27246 99.81 True local misassembly 23195298 23196647 554815 556162 NC_000014.9 velvet.27246 99.85 True fake: scaffold gap size wrong estimation (local) 23198693 23199224 558951 559482 NC_000014.9 velvet.27246 98.12 True fake: scaffold gap size wrong estimation (local) 23201339 23201996 562897 563554 NC_000014.9 velvet.27246 98.33 True fake: scaffold gap size wrong estimation (local) 23204318 23205245 566698 567653 NC_000014.9 velvet.27246 96.55 True fake: scaffold gap size wrong estimation (local) 23206376 23206989 569624 570237 NC_000014.9 velvet.27246 99.84 True indel: indel (> 5bp) 23206990 23207719 570244 570973 NC_000014.9 velvet.27246 99.45 True local misassembly 23207901 23208636 570974 571709 NC_000014.9 velvet.27246 98.37 True fake: scaffold gap size wrong estimation (local) 23229281 23230399 595205 596323 NC_000014.9 velvet.27246 99.91 True local misassembly 23225453 23226044 597191 597782 NC_000014.9 velvet.27246 100.0 True fake: scaffold gap size wrong estimation (local) 23227224 23227742 600012 600530 NC_000014.9 velvet.27246 100.0 True fake: scaffold gap size wrong estimation (local) 23230691 23231641 604095 605045 NC_000014.9 velvet.27246 100.0 True CONTIG velvet.27246 608225 misassembled CONTIG velvet.27267 375 unaligned CONTIG velvet.27289 550 unaligned CONTIG velvet.27300 243 unaligned CONTIG velvet.27309 239 unaligned CONTIG velvet.27311 233 unaligned CONTIG velvet.27328 470 unaligned CONTIG velvet.27330 487 unaligned CONTIG velvet.27332 206 unaligned CONTIG velvet.27376 227 unaligned CONTIG velvet.27405 253 unaligned CONTIG velvet.27436 220 unaligned CONTIG velvet.27449 200 unaligned CONTIG velvet.27477 717 unaligned CONTIG velvet.27498 255 unaligned CONTIG velvet.27521 202 unaligned 35844102 35846137 7109 9144 NC_000014.9 velvet.27523 99.71 True fake: scaffold gap size wrong estimation (local) 35846427 35849451 10247 13257 NC_000014.9 velvet.27523 98.55 True fake: scaffold gap size wrong estimation (local) 35857317 35858028 14248 14959 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 35858029 35858958 15011 15940 NC_000014.9 velvet.27523 98.28 True fake: scaffold gap size wrong estimation (local) 35859225 35859765 16017 16557 NC_000014.9 velvet.27523 98.15 True fake: scaffold gap size wrong estimation (local) 35860431 35864295 18052 21967 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 35864550 35869593 22789 28571 NC_000014.9 velvet.27523 99.98 True fake: scaffold gap size wrong estimation (local) 35869858 35872255 29656 32053 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 35872525 35873190 32907 33572 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 35874798 35876535 35887 37623 NC_000014.9 velvet.27523 99.88 True fake: scaffold gap size wrong estimation (local) 35876746 35877659 38495 39408 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 35877928 35882034 39977 44175 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 35882194 35883330 45181 46360 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 35883546 35884767 46450 47671 NC_000014.9 velvet.27523 99.92 True fake: scaffold gap size wrong estimation (local) 35886222 35887977 49835 51590 NC_000014.9 velvet.27523 99.43 True fake: scaffold gap size wrong estimation (local) 35888189 35890189 52608 54606 NC_000014.9 velvet.27523 99.9 True fake: scaffold gap size wrong estimation (local) 35890314 35891006 54873 55565 NC_000014.9 velvet.27523 100.0 True relocation, scaffold gap is present, inconsistency = -5253268 30639131 30642135 56958 59962 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 30642376 30642923 60259 60806 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 30643119 30644289 62051 63221 NC_000014.9 velvet.27523 99.91 True fake: scaffold gap size wrong estimation (local) 30646324 30647753 65823 67252 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 30647954 30648882 67447 68375 NC_000014.9 velvet.27523 99.89 True fake: scaffold gap size wrong estimation (local) 30649008 30654431 69263 75252 NC_000014.9 velvet.27523 99.94 True fake: scaffold gap size wrong estimation (local) 30654706 30655875 76169 77338 NC_000014.9 velvet.27523 100.0 True relocation, scaffold gap is present, inconsistency = 5237682 35893568 35900257 77349 84045 NC_000014.9 velvet.27523 99.94 True fake: scaffold gap size wrong estimation (local) 35900529 35901709 85034 86214 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 35920319 35922466 100456 102603 NC_000014.9 velvet.27523 99.86 True fake: scaffold gap size wrong estimation (local) 35923121 35923776 104282 104937 NC_000014.9 velvet.27523 100.0 True local misassembly 35924033 35924816 104938 105721 NC_000014.9 velvet.27523 98.6 True relocation, scaffold gap is present, inconsistency = 40665331 76593037 76596083 111657 108611 NC_000014.9 velvet.27523 99.8 True fake: scaffold gap size wrong estimation (local) 76590661 76592748 114869 112782 NC_000014.9 velvet.27523 99.76 True relocation, scaffold gap is present, inconsistency = 14177987 90772808 90774784 116942 118918 NC_000014.9 velvet.27523 99.95 True fake: scaffold gap size wrong estimation (local) 90775074 90776982 119792 121778 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 90777235 90779338 122523 124669 NC_000014.9 velvet.27523 99.9 True relocation, scaffold gap is present, inconsistency = 12072 90792596 90793214 125855 126473 NC_000014.9 velvet.27523 99.84 True local misassembly 90786883 90787921 126923 127961 NC_000014.9 velvet.27523 99.81 True fake: not a misassembly (possible transposable element) 90803129 90804087 128823 129781 NC_000014.9 velvet.27523 98.96 True fake: not a misassembly (possible transposable element) 90794573 90796864 129792 132071 NC_000014.9 velvet.27523 99.3 True fake: scaffold gap size wrong estimation (local) 90797452 90798518 133754 134820 NC_000014.9 velvet.27523 99.53 True relocation, scaffold gap is present, inconsistency = 11298209 79492636 79495928 141427 138135 NC_000014.9 velvet.27523 99.91 True relocation, scaffold gap is present, inconsistency = 2301116 77189417 77191509 141438 143530 NC_000014.9 velvet.27523 99.76 True relocation, scaffold gap is present, inconsistency = 13606496 90798744 90799860 144269 145385 NC_000014.9 velvet.27523 99.91 True relocation, scaffold gap is present, inconsistency = -553158 90247010 90247738 145693 146421 NC_000014.9 velvet.27523 100.0 True local misassembly 90248012 90249054 146422 147464 NC_000014.9 velvet.27523 98.95 True fake: not a misassembly (possible transposable element) 60158264 60160071 147475 149282 NC_000014.9 velvet.27523 100.0 True fake: not a misassembly (possible transposable element) 90249298 90250163 149293 150158 NC_000014.9 velvet.27523 100.0 True relocation, scaffold gap is present, inconsistency = 2650246 92900420 92901131 150169 150879 NC_000014.9 velvet.27523 99.58 True relocation, scaffold gap is present, inconsistency = 13410644 79485983 79489765 154654 150890 NC_000014.9 velvet.27523 99.47 True relocation, scaffold gap is present, inconsistency = 10760052 90251431 90251973 156268 156810 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 90252257 90253393 158171 159307 NC_000014.9 velvet.27523 99.74 True local misassembly 90253572 90254645 159308 160381 NC_000014.9 velvet.27523 98.98 True fake: scaffold gap size wrong estimation (local) 90255525 90257671 162303 164449 NC_000014.9 velvet.27523 98.04 True fake: scaffold gap size wrong estimation (local) 90257894 90259686 165344 167136 NC_000014.9 velvet.27523 99.89 True fake: scaffold gap size wrong estimation (local) 90259899 90260483 167420 168005 NC_000014.9 velvet.27523 99.83 True fake: scaffold gap size wrong estimation (local) 90262819 90265356 171541 174078 NC_000014.9 velvet.27523 99.88 True relocation, scaffold gap is present, inconsistency = 2569053 92834420 92836777 176446 174089 NC_000014.9 velvet.27523 99.96 True fake: scaffold gap size wrong estimation (local) 92830267 92833974 181637 177876 NC_000014.9 velvet.27523 99.76 True fake: scaffold gap size wrong estimation (local) 92829064 92830065 183148 182188 NC_000014.9 velvet.27523 95.67 True fake: scaffold gap size wrong estimation (local) 92827743 92828647 185148 184244 NC_000014.9 velvet.27523 99.89 True fake: scaffold gap size wrong estimation (local) 92826700 92827537 186087 185250 NC_000014.9 velvet.27523 99.88 True relocation, scaffold gap is present, inconsistency = 16268161 76556602 76557974 188024 186652 NC_000014.9 velvet.27523 100.0 True relocation, scaffold gap is present, inconsistency = 14266815 90825001 90825625 188236 188899 NC_000014.9 velvet.27523 99.34 True fake: scaffold gap size wrong estimation (local) 90826261 90827413 189772 190924 NC_000014.9 velvet.27523 99.91 True fake: scaffold gap size wrong estimation (local) 90827651 90829363 191867 193579 NC_000014.9 velvet.27523 99.88 True relocation, scaffold gap is present, inconsistency = 14281154 76522136 76524497 217940 215579 NC_000014.9 velvet.27523 99.66 True relocation, scaffold gap is present, inconsistency = 25833070 102357578 102358141 217951 218514 NC_000014.9 velvet.27523 100.0 True fake: not a misassembly (possible transposable element) 76552013 76553277 220370 219106 NC_000014.9 velvet.27523 100.0 True fake: not a misassembly (possible transposable element) 102359279 102361393 220471 222585 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 102361677 102366369 223691 228383 NC_000014.9 velvet.27523 99.94 True relocation, scaffold gap is present, inconsistency = -27285136 75081244 75085141 228394 232291 NC_000014.9 velvet.27523 99.87 True relocation, scaffold gap is present, inconsistency = 1846081 76931233 76933960 235107 232302 NC_000014.9 velvet.27523 99.89 True relocation, scaffold gap is present, inconsistency = 383785 76545148 76547437 235118 237439 NC_000014.9 velvet.27523 98.41 True inversion, scaffold gap is present 76540534 76542861 239776 237450 NC_000014.9 velvet.27523 99.57 True fake: scaffold gap size wrong estimation (local) 76538990 76540305 241779 240464 NC_000014.9 velvet.27523 99.62 True inversion, scaffold gap is present 76547544 76548663 242252 243371 NC_000014.9 velvet.27523 99.82 True inversion, scaffold gap is present 76543651 76544592 244956 244015 NC_000014.9 velvet.27523 100.0 True relocation, scaffold gap is present, inconsistency = -2799530 79340735 79343170 247402 244967 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 79331847 79340495 257136 248406 NC_000014.9 velvet.27523 99.03 True relocation, scaffold gap is present, inconsistency = -5413997 84739762 84745833 263914 257147 NC_000014.9 velvet.27523 99.78 True relocation, scaffold gap is present, inconsistency = 51793351 32943994 32946386 263939 266331 NC_000014.9 velvet.27523 99.83 True relocation, inconsistency = 49516633 82463098 82465380 266410 268692 NC_000014.9 velvet.27523 99.96 True relocation, scaffold gap is present, inconsistency = -53992371 28473020 28474001 268703 269681 NC_000014.9 velvet.27523 99.08 True relocation, scaffold gap is present, inconsistency = 9732050 38206062 38216723 269692 280358 NC_000014.9 velvet.27523 99.82 True relocation, scaffold gap is present, inconsistency = 64756018 102972752 102974307 280369 281924 NC_000014.9 velvet.27523 99.87 True relocation, scaffold gap is present, inconsistency = 26454239 76516727 76518502 283710 281935 NC_000014.9 velvet.27523 99.83 True relocation, scaffold gap is present, inconsistency = -20392708 96902001 96908551 291144 284594 NC_000014.9 velvet.27523 99.98 True fake: scaffold gap size wrong estimation (local) 96895950 96901706 298017 292261 NC_000014.9 velvet.27523 99.95 True fake: scaffold gap size wrong estimation (local) 96884469 96885958 304680 303191 NC_000014.9 velvet.27523 99.93 True relocation, scaffold gap is present, inconsistency = 1775042 98661609 98662192 305289 305872 NC_000014.9 velvet.27523 99.83 True relocation, scaffold gap is present, inconsistency = 180950 98843153 98848871 311629 305883 NC_000014.9 velvet.27523 99.01 True fake: scaffold gap size wrong estimation (local) 98831473 98842904 324105 312674 NC_000014.9 velvet.27523 99.93 True fake: scaffold gap size wrong estimation (local) 98799264 98805131 353188 347317 NC_000014.9 velvet.27523 99.86 True relocation, scaffold gap is present, inconsistency = 8011235 90784649 90786613 354604 356568 NC_000014.9 velvet.27523 99.95 True fake: scaffold gap size wrong estimation (local) 90804367 90806665 368368 370702 NC_000014.9 velvet.27523 99.56 True fake: scaffold gap size wrong estimation (local) 90806896 90816075 371617 381129 NC_000014.9 velvet.27523 99.88 True fake: scaffold gap size wrong estimation (local) 90816487 90817872 382225 383648 NC_000014.9 velvet.27523 99.93 True fake: scaffold gap size wrong estimation (local) 90818162 90819249 384000 385087 NC_000014.9 velvet.27523 99.91 True fake: scaffold gap size wrong estimation (local) 90819507 90821568 386082 388143 NC_000014.9 velvet.27523 100.0 True relocation, scaffold gap is present, inconsistency = 14256180 76562255 76563316 389215 388154 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 76558478 76559668 390416 389226 NC_000014.9 velvet.27523 100.0 True fake: not a misassembly (possible transposable element) 90822442 90823458 390604 391620 NC_000014.9 velvet.27523 98.53 True fake: not a misassembly (possible transposable element) 76554660 76555405 395544 394799 NC_000014.9 velvet.27523 100.0 True relocation, scaffold gap is present, inconsistency = 14276694 90836208 90836890 399653 400335 NC_000014.9 velvet.27523 98.54 True local misassembly 90837002 90837643 400336 400977 NC_000014.9 velvet.27523 98.29 True fake: scaffold gap size wrong estimation (local) 90838099 90838744 402391 403036 NC_000014.9 velvet.27523 99.85 True fake: scaffold gap size wrong estimation (local) 90839052 90839861 403299 404108 NC_000014.9 velvet.27523 99.88 True fake: scaffold gap size wrong estimation (local) 90842712 90843466 407922 408676 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 90844049 90844996 409077 410011 NC_000014.9 velvet.27523 98.19 True fake: scaffold gap size wrong estimation (local) 90845291 90850475 411258 416470 NC_000014.9 velvet.27523 99.29 True fake: scaffold gap size wrong estimation (local) 90850498 90851065 417155 417722 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 90851339 90852103 417922 418686 NC_000014.9 velvet.27523 99.87 True fake: scaffold gap size wrong estimation (local) 90853031 90855461 420282 422607 NC_000014.9 velvet.27523 95.66 True fake: scaffold gap size wrong estimation (local) 90856657 90859845 424744 427932 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 90862457 90863050 431155 431748 NC_000014.9 velvet.27523 98.15 True fake: scaffold gap size wrong estimation (local) 90863350 90864176 432482 433308 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 90864440 90866406 433970 435929 NC_000014.9 velvet.27523 99.64 True fake: scaffold gap size wrong estimation (local) 90869154 90875522 437365 443887 NC_000014.9 velvet.27523 99.94 True fake: scaffold gap size wrong estimation (local) 90876082 90879798 445216 448932 NC_000014.9 velvet.27523 99.92 True fake: scaffold gap size wrong estimation (local) 90902302 90903964 467526 469188 NC_000014.9 velvet.27523 99.94 True fake: scaffold gap size wrong estimation (local) 90904304 90909926 470184 475956 NC_000014.9 velvet.27523 99.89 True fake: scaffold gap size wrong estimation (local) 90910082 90910687 476847 477452 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 90910984 90912929 477829 479774 NC_000014.9 velvet.27523 99.85 True fake: not a misassembly (possible transposable element) 90866443 90869061 482794 480189 NC_000014.9 velvet.27523 99.5 True fake: not a misassembly (possible transposable element) 90939597 90943896 502279 506776 NC_000014.9 velvet.27523 97.85 True fake: scaffold gap size wrong estimation (local) 90944012 90944537 507167 507692 NC_000014.9 velvet.27523 100.0 True relocation, scaffold gap is present, inconsistency = 69854989 21086933 21088431 509782 508284 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 21086384 21086902 510613 510095 NC_000014.9 velvet.27523 98.07 True indel: indel (> 5bp) 21083522 21086093 513469 510898 NC_000014.9 velvet.27523 99.96 True fake: scaffold gap size wrong estimation (local) 21046497 21049751 546054 542791 NC_000014.9 velvet.27523 99.85 True relocation, scaffold gap is present, inconsistency = -79511521 100546807 100556309 557265 547763 NC_000014.9 velvet.27523 99.91 True fake: scaffold gap size wrong estimation (local) 100526933 100546341 578372 558568 NC_000014.9 velvet.27523 99.88 True relocation, scaffold gap is present, inconsistency = 128799 100396276 100397874 578632 580230 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 100398139 100405178 581203 588361 NC_000014.9 velvet.27523 99.96 True fake: scaffold gap size wrong estimation (local) 100405467 100410800 589462 594795 NC_000014.9 velvet.27523 99.94 True fake: scaffold gap size wrong estimation (local) 100410968 100411584 595749 596365 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 100412228 100412873 597030 597675 NC_000014.9 velvet.27523 98.45 True relocation, scaffold gap is present, inconsistency = 79392117 21016302 21020011 601484 597775 NC_000014.9 velvet.27523 99.95 True fake: scaffold gap size wrong estimation (local) 21014267 21016133 604301 602435 NC_000014.9 velvet.27523 100.0 True relocation, scaffold gap is present, inconsistency = 79398121 100414935 100417958 604982 608005 NC_000014.9 velvet.27523 100.0 True relocation, scaffold gap is present, inconsistency = -56989365 43429054 43432552 608466 611881 NC_000014.9 velvet.27523 97.6 True relocation, scaffold gap is present, inconsistency = 57062796 100495359 100504805 622014 611892 NC_000014.9 velvet.27523 99.62 True fake: scaffold gap size wrong estimation (local) 100493072 100495070 624780 622558 NC_000014.9 velvet.27523 98.5 True fake: scaffold gap size wrong estimation (local) 100482083 100492935 636412 625485 NC_000014.9 velvet.27523 99.92 True fake: scaffold gap size wrong estimation (local) 100481129 100481676 638951 638409 NC_000014.9 velvet.27523 97.64 True fake: scaffold gap size wrong estimation (local) 100478100 100479398 642972 641674 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 100475888 100477835 645772 643825 NC_000014.9 velvet.27523 100.0 True relocation, scaffold gap is present, inconsistency = 57011239 43461340 43464638 649043 645783 NC_000014.9 velvet.27523 98.71 True relocation, scaffold gap is present, inconsistency = -46665478 90123704 90125220 652157 650641 NC_000014.9 velvet.27523 99.93 True relocation, scaffold gap is present, inconsistency = -109784 90232132 90232918 653513 652727 NC_000014.9 velvet.27523 97.46 True local misassembly 90231451 90231985 654048 653514 NC_000014.9 velvet.27523 100.0 True relocation, scaffold gap is present, inconsistency = 10186953 100419252 100431562 654362 666669 NC_000014.9 velvet.27523 99.92 True fake: scaffold gap size wrong estimation (local) 100432012 100446302 667915 682527 NC_000014.9 velvet.27523 99.92 True fake: scaffold gap size wrong estimation (local) 100446582 100447934 683393 684745 NC_000014.9 velvet.27523 99.93 True fake: scaffold gap size wrong estimation (local) 100448226 100451257 685646 688677 NC_000014.9 velvet.27523 100.0 True fake: not a misassembly (possible transposable element) 90202282 90206742 688688 693148 NC_000014.9 velvet.27523 99.84 True fake: not a misassembly (possible transposable element) 100451510 100460142 693159 702572 NC_000014.9 velvet.27523 95.11 True fake: scaffold gap size wrong estimation (local) 100460414 100464504 703517 708255 NC_000014.9 velvet.27523 97.17 True fake: scaffold gap size wrong estimation (local) 100464617 100467290 709162 711800 NC_000014.9 velvet.27523 98.65 True fake: scaffold gap size wrong estimation (local) 100475100 100475898 715169 715967 NC_000014.9 velvet.27523 100.0 True relocation, scaffold gap is present, inconsistency = -29299900 71179160 71183553 719129 723687 NC_000014.9 velvet.27523 99.84 True relocation, scaffold gap is present, inconsistency = 50222985 20955490 20956096 724372 723766 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 20949757 20950494 731893 731156 NC_000014.9 velvet.27523 99.86 True inversion, scaffold gap is present 20983100 20985126 758823 760849 NC_000014.9 velvet.27523 99.9 True relocation, scaffold gap is present, inconsistency = 69282283 90267429 90269360 762792 760869 NC_000014.9 velvet.27523 99.43 True fake: scaffold gap size wrong estimation (local) 90266255 90267115 764293 763433 NC_000014.9 velvet.27523 99.77 True relocation, scaffold gap is present, inconsistency = 30072820 60186828 60192956 770900 764772 NC_000014.9 velvet.27523 99.95 True fake: scaffold gap size wrong estimation (local) 60182585 60186155 775926 772356 NC_000014.9 velvet.27523 99.86 True relocation, scaffold gap is present, inconsistency = 73833 60107340 60108741 775937 777338 NC_000014.9 velvet.27523 99.86 True relocation, scaffold gap is present, inconsistency = 1057488 61166240 61167439 778548 777349 NC_000014.9 velvet.27523 98.92 True fake: scaffold gap size wrong estimation (local) 61164368 61165505 781334 780197 NC_000014.9 velvet.27523 98.95 True local misassembly 61163561 61164072 781846 781335 NC_000014.9 velvet.27523 99.8 True fake: scaffold gap size wrong estimation (local) 61160532 61161220 785495 784807 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 61158744 61159781 787407 786370 NC_000014.9 velvet.27523 99.23 True fake: scaffold gap size wrong estimation (local) 61155941 61158493 791014 788420 NC_000014.9 velvet.27523 99.72 True relocation, scaffold gap is present, inconsistency = -29088955 90243803 90244701 792107 791209 NC_000014.9 velvet.27523 99.89 True fake: scaffold gap size wrong estimation (local) 90242003 90242871 794947 794079 NC_000014.9 velvet.27523 99.77 True fake: scaffold gap size wrong estimation (local) 90238210 90241730 798656 795108 NC_000014.9 velvet.27523 98.87 True fake: scaffold gap size wrong estimation (local) 90234824 90237205 802799 800433 NC_000014.9 velvet.27523 99.37 True relocation, scaffold gap is present, inconsistency = 22423156 67810055 67811657 804381 802810 NC_000014.9 velvet.27523 97.93 True relocation, scaffold gap is present, inconsistency = 46813229 20982130 20983019 818188 819077 NC_000014.9 velvet.27523 99.89 True fake: scaffold gap size wrong estimation (local) 20985799 20988392 822215 825089 NC_000014.9 velvet.27523 99.77 True relocation, scaffold gap is present, inconsistency = 46881533 67874435 67878859 834020 829599 NC_000014.9 velvet.27523 99.84 True relocation, scaffold gap is present, inconsistency = 45250959 22588010 22590177 869486 867319 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 22586445 22587723 871664 870386 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 22583237 22585922 875449 872755 NC_000014.9 velvet.27523 99.89 True fake: not a misassembly (possible transposable element) 67822727 67823624 877887 876988 NC_000014.9 velvet.27523 99.78 True fake: not a misassembly (possible transposable element) 22579206 22579828 880783 880161 NC_000014.9 velvet.27523 100.0 True relocation, scaffold gap is present, inconsistency = -45243213 67821722 67822408 881480 880794 NC_000014.9 velvet.27523 99.71 True fake: scaffold gap size wrong estimation (local) 67819530 67821609 884836 882757 NC_000014.9 velvet.27523 100.0 True fake: scaffold gap size wrong estimation (local) 67818421 67819001 886973 886393 NC_000014.9 velvet.27523 99.83 True CONTIG velvet.27523 886973 misassembled 82664450 82674411 9963 1 NC_000014.9 velvet.27581 99.96 True fake: scaffold gap size wrong estimation (local) 82652119 82663720 23218 11525 NC_000014.9 velvet.27581 100.0 True fake: scaffold gap size wrong estimation (local) 82648303 82651602 27758 24459 NC_000014.9 velvet.27581 99.94 True relocation, scaffold gap is present, inconsistency = 10220 82633681 82638072 27769 32145 NC_000014.9 velvet.27581 99.63 True fake: scaffold gap size wrong estimation (local) 82638139 82647642 32286 42073 NC_000014.9 velvet.27581 99.94 True inversion, scaffold gap is present 82624998 82633391 51007 42568 NC_000014.9 velvet.27581 100.0 True relocation, scaffold gap is present, inconsistency = 116809 82505714 82508178 51018 53539 NC_000014.9 velvet.27581 99.84 True fake: scaffold gap size wrong estimation (local) 82508284 82519644 53681 65137 NC_000014.9 velvet.27581 99.73 True fake: scaffold gap size wrong estimation (local) 82519915 82522889 66174 69148 NC_000014.9 velvet.27581 99.97 True fake: scaffold gap size wrong estimation (local) 82523141 82524966 69995 71816 NC_000014.9 velvet.27581 99.5 True fake: scaffold gap size wrong estimation (local) 82525092 82529171 72629 76708 NC_000014.9 velvet.27581 99.98 True CONTIG velvet.27581 76862 misassembled CONTIG velvet.27584 201 unaligned 18309243 18309756 1 514 NC_000014.9 velvet.27640 100.0 True CONTIG velvet.27640 514 correct 61436802 61440623 3815 1 NC_000014.9 velvet.27644 99.79 True fake: scaffold gap size wrong estimation (local) 61431013 61436540 11125 4903 NC_000014.9 velvet.27644 98.71 True fake: scaffold gap size wrong estimation (local) 61428097 61430741 14679 12035 NC_000014.9 velvet.27644 99.96 True relocation, scaffold gap is present, inconsistency = -35768641 97188017 97190648 23400 20769 NC_000014.9 velvet.27644 99.89 True relocation, scaffold gap is present, inconsistency = 21063 97163543 97166036 27170 24318 NC_000014.9 velvet.27644 99.8 True relocation, scaffold gap is present, inconsistency = 35754083 61405629 61409449 31001 27181 NC_000014.9 velvet.27644 99.95 True fake: scaffold gap size wrong estimation (local) 61402995 61405363 34445 32101 NC_000014.9 velvet.27644 98.9 True fake: scaffold gap size wrong estimation (local) 61396084 61402509 42193 35768 NC_000014.9 velvet.27644 99.89 True fake: scaffold gap size wrong estimation (local) 61390628 61395797 48455 43226 NC_000014.9 velvet.27644 99.83 True fake: not a misassembly (possible transposable element) 97161705 97163156 49917 48466 NC_000014.9 velvet.27644 99.93 True fake: not a misassembly (possible transposable element) 61389691 61390395 50632 49928 NC_000014.9 velvet.27644 98.58 True fake: scaffold gap size wrong estimation (local) 61388150 61389094 51935 50991 NC_000014.9 velvet.27644 100.0 True fake: not a misassembly (possible transposable element) 97373471 97374626 51946 53101 NC_000014.9 velvet.27644 100.0 True fake: not a misassembly (possible transposable element) 61382272 61387866 58704 53112 NC_000014.9 velvet.27644 99.96 True relocation, scaffold gap is present, inconsistency = 11214858 50164663 50167403 58715 62233 NC_000014.9 velvet.27644 99.89 True fake: scaffold gap size wrong estimation (local) 50168518 50169056 62876 63414 NC_000014.9 velvet.27644 100.0 True fake: scaffold gap size wrong estimation (local) 50171716 50172415 66585 67284 NC_000014.9 velvet.27644 99.86 True fake: scaffold gap size wrong estimation (local) 50172669 50173454 70885 71670 NC_000014.9 velvet.27644 99.87 True CONTIG velvet.27644 71670 misassembled CONTIG velvet.27646 3633 unaligned 64523984 64525887 1 1904 NC_000014.9 velvet.27653 100.0 True fake: scaffold gap size wrong estimation (local) 64526120 64527169 2460 3550 NC_000014.9 velvet.27653 99.51 True CONTIG velvet.27653 3680 correct CONTIG velvet.27663 236 unaligned CONTIG velvet.27677 352 unaligned 20894842 20895842 1 1001 NC_000014.9 velvet.27679 99.9 True CONTIG velvet.27679 1001 correct 60592004 60592825 1 822 NC_000014.9 velvet.27717 99.88 True fake: scaffold gap size wrong estimation (local) 60593058 60595430 2040 4374 NC_000014.9 velvet.27717 98.35 True fake: scaffold gap size wrong estimation (local) 60595704 60598435 5397 8263 NC_000014.9 velvet.27717 95.01 True fake: scaffold gap size wrong estimation (local) 60598599 60601757 9167 12327 NC_000014.9 velvet.27717 99.84 True fake: scaffold gap size wrong estimation (local) 60626857 60627395 35697 36235 NC_000014.9 velvet.27717 100.0 True fake: not a misassembly (possible transposable element) 60628019 60633536 41763 36246 NC_000014.9 velvet.27717 99.89 True fake: not a misassembly (possible transposable element) 60633839 60634991 43314 44466 NC_000014.9 velvet.27717 99.83 True CONTIG velvet.27717 44481 correct CONTIG velvet.27720 201 unaligned CONTIG velvet.27723 243 unaligned CONTIG velvet.27728 264 unaligned CONTIG velvet.27737 207 unaligned CONTIG velvet.27738 203 unaligned CONTIG velvet.27767 358 unaligned CONTIG velvet.27782 354 unaligned 83929074 83929615 1 540 NC_000014.9 velvet.27812 98.34 True CONTIG velvet.27812 540 correct CONTIG velvet.27819 396 unaligned CONTIG velvet.27876 220 unaligned CONTIG velvet.27890 483 unaligned CONTIG velvet.27903 340 unaligned CONTIG velvet.27920 222 unaligned CONTIG velvet.27950 339 unaligned CONTIG velvet.27982 8424 unaligned CONTIG velvet.28005 367 unaligned CONTIG velvet.28006 248 unaligned CONTIG velvet.28009 221 unaligned 51757174 51757896 1 723 NC_000014.9 velvet.28036 99.72 True CONTIG velvet.28036 723 correct CONTIG velvet.28089 350 unaligned 105568443 105569056 614 1 NC_000014.9 velvet.28096 98.86 True CONTIG velvet.28096 614 correct CONTIG velvet.28136 214 unaligned CONTIG velvet.28157 586 unaligned CONTIG velvet.28167 270 unaligned CONTIG velvet.28195 205 unaligned CONTIG velvet.28219 227 unaligned 40465531 40466218 688 1 NC_000014.9 velvet.28237 100.0 True CONTIG velvet.28237 688 correct CONTIG velvet.28291 258 unaligned CONTIG velvet.28312 7320 unaligned CONTIG velvet.28327 33637 unaligned CONTIG velvet.28338 519 unaligned CONTIG velvet.28362 317 unaligned CONTIG velvet.28363 220 unaligned 49649721 49650703 983 1 NC_000014.9 velvet.28400 100.0 True fake: scaffold gap size wrong estimation (local) 49647730 49648875 3732 2587 NC_000014.9 velvet.28400 100.0 True fake: scaffold gap size wrong estimation (local) 49646592 49647380 4681 3893 NC_000014.9 velvet.28400 100.0 True CONTIG velvet.28400 20801 correct CONTIG velvet.28411 259 unaligned 80870800 80873715 1 2911 NC_000014.9 velvet.28440 99.69 True CONTIG velvet.28440 2911 correct CONTIG velvet.28459 273 unaligned 77644209 77644931 723 1 NC_000014.9 velvet.28556 98.62 True local misassembly 77643230 77643964 1458 724 NC_000014.9 velvet.28556 100.0 True CONTIG velvet.28556 3967 correct 105351918 105352529 769 158 NC_000014.9 velvet.28561 100.0 True CONTIG velvet.28561 1099 correct CONTIG velvet.28576 228 unaligned CONTIG velvet.28593 374 unaligned CONTIG velvet.28595 205 unaligned 87188963 87189748 1 785 NC_000014.9 velvet.28631 98.47 True CONTIG velvet.28631 785 correct CONTIG velvet.28632 370 unaligned 105715657 105717864 1 2208 NC_000014.9 velvet.28691 99.28 True relocation, scaffold gap is present, inconsistency = -121896 105597190 105608034 3430 14578 NC_000014.9 velvet.28691 96.99 True CONTIG velvet.28691 14578 misassembled CONTIG velvet.28701 207 unaligned CONTIG velvet.28723 642 unaligned CONTIG velvet.28757 33312 unaligned CONTIG velvet.28775 283 unaligned CONTIG velvet.28776 419 unaligned CONTIG velvet.28796 305 unaligned 79929809 79933836 1 3978 NC_000014.9 velvet.28800 98.66 True CONTIG velvet.28800 3978 correct CONTIG velvet.28801 214 unaligned 67685869 67686467 1 599 NC_000014.9 velvet.28807 99.83 True CONTIG velvet.28807 599 correct 70872710 70874236 1 1527 NC_000014.9 velvet.28809 99.8 True fake: scaffold gap size wrong estimation (local) 70874495 70875314 1979 2797 NC_000014.9 velvet.28809 99.88 True fake: scaffold gap size wrong estimation (local) 70875383 70875898 3583 4098 NC_000014.9 velvet.28809 99.81 True fake: scaffold gap size wrong estimation (local) 70876245 70876770 4352 4877 NC_000014.9 velvet.28809 97.91 True CONTIG velvet.28809 4877 correct CONTIG velvet.28812 441 unaligned 21271068 21271883 1 816 NC_000014.9 velvet.28825 100.0 True fake: scaffold gap size wrong estimation (local) 21274274 21275066 4089 4868 NC_000014.9 velvet.28825 98.34 True CONTIG velvet.28825 8097 correct CONTIG velvet.28857 392 unaligned CONTIG velvet.28871 489 unaligned 23629195 23629718 528 5 NC_000014.9 velvet.28888 99.05 True CONTIG velvet.28888 528 correct CONTIG velvet.28901 240 unaligned CONTIG velvet.28910 313 unaligned CONTIG velvet.28932 313 unaligned 43955834 43957100 1 1259 NC_000014.9 velvet.28958 99.05 True CONTIG velvet.28958 3804 correct CONTIG velvet.28967 240 unaligned CONTIG velvet.28972 332 unaligned 74080712 74081974 1263 1 NC_000014.9 velvet.28976 99.92 True CONTIG velvet.28976 1263 correct CONTIG velvet.28986 217 unaligned CONTIG velvet.29024 282 unaligned CONTIG velvet.29038 321 unaligned CONTIG velvet.29053 715 unaligned CONTIG velvet.29054 345 unaligned CONTIG velvet.29057 1011 unaligned 43423014 43423592 1 579 NC_000014.9 velvet.29093 100.0 True CONTIG velvet.29093 579 correct CONTIG velvet.29173 213 unaligned CONTIG velvet.29182 397 unaligned 89391812 89392648 1 837 NC_000014.9 velvet.29259 99.28 True CONTIG velvet.29259 837 correct CONTIG velvet.29266 30459 unaligned CONTIG velvet.29301 206 unaligned CONTIG velvet.29309 241 unaligned 18893700 18894245 1 546 NC_000014.9 velvet.29333 99.82 True CONTIG velvet.29333 546 correct 46448751 46453383 4638 1 NC_000014.9 velvet.29335 99.81 True CONTIG velvet.29335 4638 correct 73576071 73576574 3928 3425 NC_000014.9 velvet.29389 99.6 True CONTIG velvet.29389 7515 correct CONTIG velvet.29391 3738 unaligned CONTIG velvet.29410 243 unaligned CONTIG velvet.29414 262 unaligned CONTIG velvet.29424 382 unaligned 105708979 105709482 1 504 NC_000014.9 velvet.29437 99.4 True CONTIG velvet.29437 504 correct CONTIG velvet.29446 909 unaligned CONTIG velvet.29459 215 unaligned CONTIG velvet.29471 343 unaligned 18296851 18298337 1487 1 NC_000014.9 velvet.29482 99.93 True CONTIG velvet.29482 1487 correct CONTIG velvet.29505 356 unaligned CONTIG velvet.29539 200 unaligned CONTIG velvet.29562 238 unaligned CONTIG velvet.29577 403 unaligned CONTIG velvet.29579 333 unaligned CONTIG velvet.29590 252 unaligned CONTIG velvet.29594 315 unaligned CONTIG velvet.29677 203 unaligned 18317578 18318137 1 560 NC_000014.9 velvet.29679 100.0 True CONTIG velvet.29679 560 correct CONTIG velvet.29688 241 unaligned CONTIG velvet.29718 379 unaligned 19443396 19444248 853 1 NC_000014.9 velvet.29744 99.88 True CONTIG velvet.29744 853 correct CONTIG velvet.29753 325 unaligned 31812369 31813010 3160 3801 NC_000014.9 velvet.29772 97.98 True CONTIG velvet.29772 3801 correct CONTIG velvet.29811 29459 unaligned CONTIG velvet.29827 1199 unaligned CONTIG velvet.29828 208 unaligned 79556689 79560528 3913 3 NC_000014.9 velvet.29841 99.92 True fake: scaffold gap size wrong estimation (local) 79548526 79549976 10506 9066 NC_000014.9 velvet.29841 99.31 True CONTIG velvet.29841 10506 correct CONTIG velvet.29856 304 unaligned 73574516 73575898 1 1383 NC_000014.9 velvet.29874 99.93 True CONTIG velvet.29874 1383 correct CONTIG velvet.29888 286 unaligned CONTIG velvet.29890 232 unaligned CONTIG velvet.29901 411 unaligned CONTIG velvet.29902 209 unaligned 87658586 87661605 1 3020 NC_000014.9 velvet.29904 100.0 True CONTIG velvet.29904 3020 correct 94358544 94359295 1 754 NC_000014.9 velvet.29966 99.73 True CONTIG velvet.29966 768 correct CONTIG velvet.29996 238 unaligned CONTIG velvet.30012 202 unaligned CONTIG velvet.30063 285 unaligned 48953817 48955651 1833 1 NC_000014.9 velvet.30091 99.78 True fake: scaffold gap size wrong estimation (local) 48945253 48953535 11261 2873 NC_000014.9 velvet.30091 99.94 True relocation, scaffold gap is present, inconsistency = -20938615 69876237 69883857 18922 11272 NC_000014.9 velvet.30091 99.48 True relocation, scaffold gap is present, inconsistency = -9578 69884473 69885281 20264 19456 NC_000014.9 velvet.30091 99.51 True fake: scaffold gap size wrong estimation (local) 69858755 69875445 43317 24847 NC_000014.9 velvet.30091 99.84 True fake: scaffold gap size wrong estimation (local) 69857379 69858479 44623 43541 NC_000014.9 velvet.30091 98.35 True fake: scaffold gap size wrong estimation (local) 69847174 69857119 55779 45726 NC_000014.9 velvet.30091 99.87 True fake: scaffold gap size wrong estimation (local) 69845032 69846174 58753 57611 NC_000014.9 velvet.30091 100.0 True fake: scaffold gap size wrong estimation (local) 69837369 69837991 61732 61110 NC_000014.9 velvet.30091 100.0 True fake: scaffold gap size wrong estimation (local) 69833716 69835813 66185 64087 NC_000014.9 velvet.30091 99.9 True relocation, scaffold gap is present, inconsistency = -11040 69840050 69844745 71688 66196 NC_000014.9 velvet.30091 99.72 True fake: scaffold gap size wrong estimation (local) 69831266 69832681 74555 73146 NC_000014.9 velvet.30091 98.98 True local misassembly 69832699 69833486 75353 74566 NC_000014.9 velvet.30091 100.0 True relocation, scaffold gap is present, inconsistency = 25910 69804714 69806778 75364 77428 NC_000014.9 velvet.30091 99.95 True fake: not a misassembly (possible transposable element) 69802534 69804399 80004 78139 NC_000014.9 velvet.30091 99.95 True fake: not a misassembly (possible transposable element) 69807070 69808486 82706 84107 NC_000014.9 velvet.30091 98.79 True fake: scaffold gap size wrong estimation (local) 69810190 69811541 86603 87987 NC_000014.9 velvet.30091 99.77 True fake: scaffold gap size wrong estimation (local) 69813491 69815681 90676 92866 NC_000014.9 velvet.30091 99.68 True indel: indel (> 5bp) 69815691 69816443 92867 93619 NC_000014.9 velvet.30091 98.67 True fake: scaffold gap size wrong estimation (local) 69816468 69817667 94020 95219 NC_000014.9 velvet.30091 99.17 True fake: scaffold gap size wrong estimation (extensive) 69826663 69827297 96548 97182 NC_000014.9 velvet.30091 99.84 True fake: scaffold gap size wrong estimation (local) 69827917 69828698 98068 98849 NC_000014.9 velvet.30091 100.0 True fake: scaffold gap size wrong estimation (local) 69829252 69830000 99912 100660 NC_000014.9 velvet.30091 99.87 True relocation, scaffold gap is present, inconsistency = 27658 69800124 69801209 102124 101045 NC_000014.9 velvet.30091 99.35 True fake: scaffold gap size wrong estimation (local) 69799355 69799861 102735 102229 NC_000014.9 velvet.30091 99.8 True fake: not a misassembly (possible transposable element) 69811567 69813227 102746 104406 NC_000014.9 velvet.30091 99.64 True fake: not a misassembly (possible transposable element) 69795544 69799327 108591 104417 NC_000014.9 velvet.30091 99.81 True fake: scaffold gap size wrong estimation (local) 69792135 69795386 112489 109183 NC_000014.9 velvet.30091 99.97 True fake: scaffold gap size wrong estimation (local) 69785871 69787901 115734 113705 NC_000014.9 velvet.30091 99.85 True fake: scaffold gap size wrong estimation (local) 69782810 69785577 119579 116813 NC_000014.9 velvet.30091 99.93 True fake: scaffold gap size wrong estimation (local) 69780054 69782523 123117 120644 NC_000014.9 velvet.30091 99.72 True relocation, scaffold gap is present, inconsistency = -12474 69789929 69791286 125716 124359 NC_000014.9 velvet.30091 99.78 True fake: scaffold gap size wrong estimation (local) 69787957 69788531 128639 128065 NC_000014.9 velvet.30091 100.0 True fake: scaffold gap size wrong estimation (extensive) 69746024 69746600 161176 160600 NC_000014.9 velvet.30091 100.0 True local misassembly 69749823 69751071 162435 161187 NC_000014.9 velvet.30091 99.92 True fake: scaffold gap size wrong estimation (local) 69744315 69744953 169897 169259 NC_000014.9 velvet.30091 99.69 True fake: scaffold gap size wrong estimation (local) 69739340 69740542 176933 175731 NC_000014.9 velvet.30091 98.67 True fake: scaffold gap size wrong estimation (local) 69736591 69737803 180480 179268 NC_000014.9 velvet.30091 99.92 True fake: scaffold gap size wrong estimation (local) 69705321 69707478 212864 210620 NC_000014.9 velvet.30091 97.76 True relocation, scaffold gap is present, inconsistency = -55998 69759563 69761308 214620 212875 NC_000014.9 velvet.30091 99.89 True fake: scaffold gap size wrong estimation (local) 69758011 69759304 217142 215905 NC_000014.9 velvet.30091 95.64 True fake: scaffold gap size wrong estimation (local) 69725745 69728939 245813 242682 NC_000014.9 velvet.30091 97.86 True fake: scaffold gap size wrong estimation (local) 69724450 69725359 247936 247028 NC_000014.9 velvet.30091 99.56 True fake: scaffold gap size wrong estimation (local) 69722446 69724368 249983 248029 NC_000014.9 velvet.30091 100.0 True fake: scaffold gap size wrong estimation (local) 69699541 69701190 268626 267028 NC_000014.9 velvet.30091 96.83 True fake: scaffold gap size wrong estimation (local) 69698256 69699191 271224 270289 NC_000014.9 velvet.30091 97.22 True local misassembly 69697228 69698055 272052 271225 NC_000014.9 velvet.30091 99.76 True fake: not a misassembly (possible transposable element) 85821594 85824375 272063 274844 NC_000014.9 velvet.30091 99.96 True fake: not a misassembly (possible transposable element) 69692040 69696988 279802 274855 NC_000014.9 velvet.30091 99.92 True fake: scaffold gap size wrong estimation (local) 69691220 69691758 281503 280965 NC_000014.9 velvet.30091 100.0 True relocation, scaffold gap is present, inconsistency = 12572 69677550 69678520 282601 281631 NC_000014.9 velvet.30091 100.0 True relocation, scaffold gap is present, inconsistency = 13959580 55715521 55717959 282612 285050 NC_000014.9 velvet.30091 100.0 True fake: scaffold gap size wrong estimation (local) 55718508 55726656 286417 294565 NC_000014.9 velvet.30091 99.99 True relocation, scaffold gap is present, inconsistency = 13942654 69669321 69676484 301738 294576 NC_000014.9 velvet.30091 99.93 True fake: scaffold gap size wrong estimation (local) 69667648 69668350 304112 303410 NC_000014.9 velvet.30091 99.86 True fake: scaffold gap size wrong estimation (local) 69664254 69667366 308214 304372 NC_000014.9 velvet.30091 98.09 True fake: scaffold gap size wrong estimation (local) 69659771 69663962 313601 309410 NC_000014.9 velvet.30091 99.98 True relocation, scaffold gap is present, inconsistency = 6777514 76443122 76444089 315247 316214 NC_000014.9 velvet.30091 100.0 True fake: scaffold gap size wrong estimation (local) 76445979 76448344 318974 321294 NC_000014.9 velvet.30091 98.09 True fake: scaffold gap size wrong estimation (local) 76448637 76449296 322120 322779 NC_000014.9 velvet.30091 100.0 True fake: scaffold gap size wrong estimation (local) 76449860 76451641 323780 325557 NC_000014.9 velvet.30091 99.78 True fake: scaffold gap size wrong estimation (local) 76457919 76458443 325568 326092 NC_000014.9 velvet.30091 100.0 True fake: scaffold gap size wrong estimation (local) 76459147 76460738 327200 328791 NC_000014.9 velvet.30091 100.0 True relocation, scaffold gap is present, inconsistency = 6816460 69639319 69640467 332203 331011 NC_000014.9 velvet.30091 99.91 True fake: scaffold gap size wrong estimation (local) 69632653 69639040 339801 333325 NC_000014.9 velvet.30091 97.94 True relocation, scaffold gap is present, inconsistency = 6837088 76476139 76476981 339812 340654 NC_000014.9 velvet.30091 100.0 True relocation, scaffold gap is present, inconsistency = 1050179 75423265 75425949 343348 340665 NC_000014.9 velvet.30091 99.93 True fake: scaffold gap size wrong estimation (local) 75421743 75423183 345593 344153 NC_000014.9 velvet.30091 100.0 True fake: scaffold gap size wrong estimation (local) 75403501 75405501 357552 355551 NC_000014.9 velvet.30091 99.65 True relocation, scaffold gap is present, inconsistency = -17983 75420804 75421473 358229 357563 NC_000014.9 velvet.30091 99.55 True relocation, scaffold gap is present, inconsistency = 1056847 76478471 76479936 358380 359845 NC_000014.9 velvet.30091 99.93 True local misassembly 76473162 76474658 359856 361352 NC_000014.9 velvet.30091 99.87 True relocation, scaffold gap is present, inconsistency = 1052630 75416814 75420521 365921 361363 NC_000014.9 velvet.30091 99.92 True fake: scaffold gap size wrong estimation (local) 75415020 75416581 368125 366564 NC_000014.9 velvet.30091 99.94 True fake: scaffold gap size wrong estimation (local) 75413742 75414779 369974 368937 NC_000014.9 velvet.30091 99.9 True fake: scaffold gap size wrong estimation (local) 75408838 75411636 375885 373093 NC_000014.9 velvet.30091 99.46 True relocation, scaffold gap is present, inconsistency = 21465163 96876810 96879239 375896 378314 NC_000014.9 velvet.30091 99.55 True fake: scaffold gap size wrong estimation (local) 96879958 96883073 379790 382905 NC_000014.9 velvet.30091 99.94 True local misassembly 96889213 96891135 382906 384828 NC_000014.9 velvet.30091 98.6 True fake: scaffold gap size wrong estimation (local) 96892833 96895845 387421 390433 NC_000014.9 velvet.30091 99.9 True relocation, scaffold gap is present, inconsistency = 124919 97020775 97021344 391013 390444 NC_000014.9 velvet.30091 100.0 True relocation, scaffold gap is present, inconsistency = 21612180 75408032 75408584 391024 391576 NC_000014.9 velvet.30091 99.64 True relocation, scaffold gap is present, inconsistency = 21624311 97032906 97034420 391587 393101 NC_000014.9 velvet.30091 100.0 True fake: scaffold gap size wrong estimation (local) 97034708 97052332 394160 411782 NC_000014.9 velvet.30091 99.91 True relocation, scaffold gap is present, inconsistency = 55137 97107480 97109075 413387 411793 NC_000014.9 velvet.30091 99.87 True relocation, scaffold gap is present, inconsistency = 154672 96945425 96952797 413398 421608 NC_000014.9 velvet.30091 99.92 True relocation, scaffold gap is present, inconsistency = 21608377 75336447 75337037 422209 421619 NC_000014.9 velvet.30091 100.0 True relocation, scaffold gap is present, inconsistency = -21639935 96972603 96976371 425988 422220 NC_000014.9 velvet.30091 100.0 True fake: scaffold gap size wrong estimation (local) 96969912 96972308 429537 427113 NC_000014.9 velvet.30091 98.85 True relocation, scaffold gap is present, inconsistency = 21627819 75338105 75342082 433524 429548 NC_000014.9 velvet.30091 99.95 True relocation, scaffold gap is present, inconsistency = -8214 75345266 75346308 434579 433535 NC_000014.9 velvet.30091 99.81 True fake: scaffold gap size wrong estimation (local) 75342257 75344949 438261 435569 NC_000014.9 velvet.30091 100.0 True relocation, scaffold gap is present, inconsistency = 21616825 96961785 96969685 438272 446171 NC_000014.9 velvet.30091 99.96 True relocation, scaffold gap is present, inconsistency = 488302 96470070 96471085 449584 448569 NC_000014.9 velvet.30091 99.02 True fake: scaffold gap size wrong estimation (local) 96464539 96465182 456620 455977 NC_000014.9 velvet.30091 98.45 True local misassembly 96463720 96464295 457196 456621 NC_000014.9 velvet.30091 99.83 True relocation, scaffold gap is present, inconsistency = -642052 97099375 97105761 463663 457207 NC_000014.9 velvet.30091 98.79 True inversion, scaffold gap is present 97109312 97110173 463674 464535 NC_000014.9 velvet.30091 100.0 True relocation, scaffold gap is present, inconsistency = 17329 97127513 97129197 466230 464546 NC_000014.9 velvet.30091 99.88 True fake: scaffold gap size wrong estimation (local) 97124766 97127204 469644 467206 NC_000014.9 velvet.30091 99.63 True fake: scaffold gap size wrong estimation (local) 97110262 97124467 485788 470710 NC_000014.9 velvet.30091 99.89 True relocation, scaffold gap is present, inconsistency = 41915783 55193660 55194437 486607 485830 NC_000014.9 velvet.30091 100.0 True fake: scaffold gap size wrong estimation (local) 55187630 55192746 494327 487825 NC_000014.9 velvet.30091 99.18 True fake: scaffold gap size wrong estimation (local) 55186268 55186920 496092 495440 NC_000014.9 velvet.30091 100.0 True fake: scaffold gap size wrong estimation (local) 55184154 55185288 498609 497475 NC_000014.9 velvet.30091 100.0 True fake: not a misassembly (possible transposable element) 71506951 71509491 499269 501809 NC_000014.9 velvet.30091 100.0 True fake: not a misassembly (possible transposable element) 55176984 55177524 502360 501820 NC_000014.9 velvet.30091 100.0 True fake: scaffold gap size wrong estimation (local) 55174963 55176691 504539 502811 NC_000014.9 velvet.30091 99.94 True relocation, scaffold gap is present, inconsistency = -41913387 97082243 97083351 510646 509538 NC_000014.9 velvet.30091 100.0 True CONTIG velvet.30091 510646 misassembled CONTIG velvet.30127 405 unaligned CONTIG velvet.30147 343 unaligned 72989199 72990411 1154 1 NC_000014.9 velvet.30178 95.01 True CONTIG velvet.30178 1154 correct 105955130 105955704 1 575 NC_000014.9 velvet.30189 100.0 True CONTIG velvet.30189 575 correct CONTIG velvet.30205 220 unaligned 62193645 62194223 1 579 NC_000014.9 velvet.30213 100.0 True CONTIG velvet.30213 579 correct CONTIG velvet.30241 249 unaligned CONTIG velvet.30250 231 unaligned CONTIG velvet.30253 406 unaligned CONTIG velvet.30256 304 unaligned 21910078 21910773 696 1 NC_000014.9 velvet.30285 98.99 True CONTIG velvet.30285 696 correct CONTIG velvet.30289 245 unaligned CONTIG velvet.30339 356 unaligned CONTIG velvet.30354 212 unaligned CONTIG velvet.30381 479 unaligned CONTIG velvet.30383 3730 unaligned CONTIG velvet.30403 254 unaligned CONTIG velvet.30410 380 unaligned CONTIG velvet.30419 3872 unaligned CONTIG velvet.30451 309 unaligned 18437211 18437743 1 533 NC_000014.9 velvet.30497 100.0 True CONTIG velvet.30497 533 correct CONTIG velvet.30534 216 unaligned 101966411 101967584 1 1174 NC_000014.9 velvet.30548 100.0 True fake: scaffold gap size wrong estimation (local) 101967678 101968700 2209 3217 NC_000014.9 velvet.30548 98.52 True fake: scaffold gap size wrong estimation (local) 101969314 101970493 3912 5091 NC_000014.9 velvet.30548 99.15 True CONTIG velvet.30548 6240 correct CONTIG velvet.30567 291 unaligned 73225322 73225847 775 250 NC_000014.9 velvet.30629 100.0 True CONTIG velvet.30629 775 correct CONTIG velvet.30637 3747 unaligned 84549768 84550482 1 715 NC_000014.9 velvet.30663 99.86 True CONTIG velvet.30663 715 correct 61204764 61205365 602 1 NC_000014.9 velvet.30687 99.83 True fake: scaffold gap size wrong estimation (local) 61195007 61204649 12628 1586 NC_000014.9 velvet.30687 99.92 True fake: scaffold gap size wrong estimation (local) 61192021 61194794 16359 13586 NC_000014.9 velvet.30687 99.89 True relocation, scaffold gap is present, inconsistency = 78797 61106111 61113213 16370 23534 NC_000014.9 velvet.30687 99.05 True fake: scaffold gap size wrong estimation (local) 61113490 61117418 24608 28536 NC_000014.9 velvet.30687 99.8 True fake: scaffold gap size wrong estimation (local) 61118037 61118570 29825 30358 NC_000014.9 velvet.30687 99.63 True relocation, scaffold gap is present, inconsistency = 43841 61169224 61171020 38967 37171 NC_000014.9 velvet.30687 99.83 True fake: scaffold gap size wrong estimation (local) 61167471 61168878 41758 39910 NC_000014.9 velvet.30687 99.78 True relocation, scaffold gap is present, inconsistency = 34681003 26484466 26486457 41769 43760 NC_000014.9 velvet.30687 99.85 True fake: scaffold gap size wrong estimation (local) 26486728 26489727 44711 47710 NC_000014.9 velvet.30687 99.9 True fake: scaffold gap size wrong estimation (local) 26489838 26490792 48693 49647 NC_000014.9 velvet.30687 99.9 True local misassembly 26491152 26491982 49648 50478 NC_000014.9 velvet.30687 97.83 True fake: not a misassembly (possible transposable element) 61161234 61163501 52756 50482 NC_000014.9 velvet.30687 99.82 True fake: not a misassembly (possible transposable element) 26491983 26492715 52757 53489 NC_000014.9 velvet.30687 98.64 True fake: scaffold gap size wrong estimation (local) 26492923 26495562 54295 56936 NC_000014.9 velvet.30687 99.92 True relocation, scaffold gap is present, inconsistency = 33658127 60153700 60155182 56947 58429 NC_000014.9 velvet.30687 100.0 True fake: scaffold gap size wrong estimation (local) 60155445 60157985 59315 61883 NC_000014.9 velvet.30687 99.96 True relocation, scaffold gap is present, inconsistency = 977873 61139161 61141073 65186 67099 NC_000014.9 velvet.30687 99.63 True inversion, scaffold gap is present 61141991 61143336 68455 67110 NC_000014.9 velvet.30687 100.0 True fake: not a misassembly (possible transposable element) 61152417 61155287 68466 71336 NC_000014.9 velvet.30687 99.93 True fake: not a misassembly (possible transposable element) 61141051 61141974 72699 71737 NC_000014.9 velvet.30687 99.78 True CONTIG velvet.30687 72704 misassembled CONTIG velvet.30734 397 unaligned CONTIG velvet.30759 208 unaligned 31316122 31316749 1 628 NC_000014.9 velvet.30777 100.0 True CONTIG velvet.30777 628 correct CONTIG velvet.30787 3881 unaligned CONTIG velvet.30909 232 unaligned 36904876 36905631 756 1 NC_000014.9 velvet.30915 100.0 True fake: scaffold gap size wrong estimation (local) 36902720 36903363 4054 3411 NC_000014.9 velvet.30915 100.0 True CONTIG velvet.30915 4054 correct CONTIG velvet.30930 308 unaligned CONTIG velvet.30944 253 unaligned CONTIG velvet.30958 336 unaligned CONTIG velvet.30962 216 unaligned CONTIG velvet.30973 337 unaligned CONTIG velvet.30975 225 unaligned CONTIG velvet.31055 299 unaligned CONTIG velvet.31056 223 unaligned CONTIG velvet.31057 372 unaligned CONTIG velvet.31061 215 unaligned 18996091 18996685 595 1 NC_000014.9 velvet.31067 100.0 True CONTIG velvet.31067 595 correct CONTIG velvet.31072 340 unaligned 102802936 102803607 672 1 NC_000014.9 velvet.31092 99.85 True fake: scaffold gap size wrong estimation (local) 102801225 102801745 3466 2946 NC_000014.9 velvet.31092 100.0 True fake: scaffold gap size wrong estimation (local) 102796141 102797722 5424 3843 NC_000014.9 velvet.31092 99.75 True inversion, scaffold gap is present 102798650 102799596 5730 6672 NC_000014.9 velvet.31092 99.47 True relocation, scaffold gap is present, inconsistency = 8620 102757231 102758457 39471 38245 NC_000014.9 velvet.31092 100.0 True CONTIG velvet.31092 39471 misassembled CONTIG velvet.31111 273 unaligned 35450787 35451362 1 576 NC_000014.9 velvet.31115 99.83 True CONTIG velvet.31115 576 correct CONTIG velvet.31182 253 unaligned CONTIG velvet.31192 228 unaligned CONTIG velvet.31206 223 unaligned CONTIG velvet.31217 358 unaligned CONTIG velvet.31224 400 unaligned 37546840 37551620 4945 1 NC_000014.9 velvet.31229 99.94 True CONTIG velvet.31229 4945 correct CONTIG velvet.31257 405 unaligned 103987138 103988191 1 1054 NC_000014.9 velvet.31271 99.91 True CONTIG velvet.31271 1054 correct 69224264 69224795 1 531 NC_000014.9 velvet.31278 99.81 True fake: scaffold gap size wrong estimation (local) 69224969 69226510 934 2475 NC_000014.9 velvet.31278 100.0 True fake: scaffold gap size wrong estimation (local) 69226806 69227592 3097 3883 NC_000014.9 velvet.31278 100.0 True fake: scaffold gap size wrong estimation (local) 69228492 69230820 5600 7928 NC_000014.9 velvet.31278 99.91 True CONTIG velvet.31278 7928 correct CONTIG velvet.31298 498 unaligned CONTIG velvet.31310 263 unaligned 99142007 99142641 1 635 NC_000014.9 velvet.31313 100.0 True CONTIG velvet.31313 635 correct CONTIG velvet.31323 390 unaligned CONTIG velvet.31336 549 unaligned CONTIG velvet.31345 212 unaligned 24548526 24549321 4380 5220 NC_000014.9 velvet.31371 99.73 True CONTIG velvet.31371 5304 correct_unaligned 67069432 67070358 927 1 NC_000014.9 velvet.31374 100.0 True CONTIG velvet.31374 3977 correct CONTIG velvet.31408 266 unaligned CONTIG velvet.31432 244 unaligned CONTIG velvet.31436 220 unaligned CONTIG velvet.31447 229 unaligned CONTIG velvet.31453 292 unaligned CONTIG velvet.31458 255 unaligned CONTIG velvet.31478 243 unaligned CONTIG velvet.31504 276 unaligned CONTIG velvet.31520 558 unaligned 31572429 31574267 718 2556 NC_000014.9 velvet.31541 99.78 True CONTIG velvet.31541 2556 correct CONTIG velvet.31544 208 unaligned CONTIG velvet.31562 378 unaligned CONTIG velvet.31563 287 unaligned CONTIG velvet.31572 215 unaligned CONTIG velvet.31638 214 unaligned CONTIG velvet.31674 316 unaligned CONTIG velvet.31684 230 unaligned CONTIG velvet.31687 440 unaligned CONTIG velvet.31708 232 unaligned CONTIG velvet.31740 261 unaligned CONTIG velvet.31759 261 unaligned CONTIG velvet.31815 470 unaligned CONTIG velvet.31823 283 unaligned 36083042 36083592 587 1 NC_000014.9 velvet.31828 100.0 True CONTIG velvet.31828 587 correct CONTIG velvet.31910 464 unaligned CONTIG velvet.31914 221 unaligned CONTIG velvet.31926 200 unaligned CONTIG velvet.31940 286 unaligned CONTIG velvet.31988 265 unaligned CONTIG velvet.31990 494 unaligned CONTIG velvet.31992 342 unaligned CONTIG velvet.32017 236 unaligned CONTIG velvet.32067 295 unaligned CONTIG velvet.32131 248 unaligned CONTIG velvet.32135 378 unaligned CONTIG velvet.32157 225 unaligned CONTIG velvet.32161 220 unaligned CONTIG velvet.32171 230 unaligned CONTIG velvet.32172 226 unaligned 29108147 29108762 1 616 NC_000014.9 velvet.32191 99.68 True fake: scaffold gap size wrong estimation (local) 29108984 29110496 2220 3740 NC_000014.9 velvet.32191 99.21 True CONTIG velvet.32191 3740 correct CONTIG velvet.32197 213 unaligned CONTIG velvet.32199 205 unaligned CONTIG velvet.32221 218 unaligned CONTIG velvet.32223 353 unaligned CONTIG velvet.32242 760 unaligned CONTIG velvet.32247 221 unaligned CONTIG velvet.32255 306 unaligned CONTIG velvet.32260 256 unaligned 77367887 77368464 1 576 NC_000014.9 velvet.32306 99.46 True fake: scaffold gap size wrong estimation (local) 77368773 77369964 691 1882 NC_000014.9 velvet.32306 99.92 True CONTIG velvet.32306 2287 correct CONTIG velvet.32307 314 unaligned CONTIG velvet.32309 290 unaligned 44873290 44873919 1 675 NC_000014.9 velvet.32341 100.0 True CONTIG velvet.32341 675 correct CONTIG velvet.32344 234 unaligned CONTIG velvet.32358 202 unaligned 103118085 103119407 1 1323 NC_000014.9 velvet.32365 100.0 True CONTIG velvet.32365 1323 correct CONTIG velvet.32379 330 unaligned 92822925 92823513 1 589 NC_000014.9 velvet.32415 100.0 True CONTIG velvet.32415 589 correct CONTIG velvet.32442 414 unaligned 41154519 41156153 1 1637 NC_000014.9 velvet.32476 99.82 True relocation, scaffold gap is present, inconsistency = 35685117 76854587 76856502 16869 14954 NC_000014.9 velvet.32476 100.0 True relocation, scaffold gap is present, inconsistency = 13782 76839984 76840579 17690 17095 NC_000014.9 velvet.32476 99.83 True fake: scaffold gap size wrong estimation (local) 76838872 76839801 21659 20730 NC_000014.9 velvet.32476 99.68 True relocation, scaffold gap is present, inconsistency = 35663652 41169975 41175209 21670 26904 NC_000014.9 velvet.32476 99.85 True fake: scaffold gap size wrong estimation (local) 41176105 41185011 28616 37585 NC_000014.9 velvet.32476 99.87 True relocation, scaffold gap is present, inconsistency = 35652097 76837119 76838800 39277 37596 NC_000014.9 velvet.32476 100.0 True fake: scaffold gap size wrong estimation (local) 76835676 76836507 41531 40700 NC_000014.9 velvet.32476 100.0 True relocation, scaffold gap is present, inconsistency = -17297 76851939 76852606 42565 41898 NC_000014.9 velvet.32476 100.0 True relocation, scaffold gap is present, inconsistency = 2140817 74703482 74704263 49424 50205 NC_000014.9 velvet.32476 100.0 True relocation, scaffold gap is present, inconsistency = -33517382 41186892 41192264 50216 55581 NC_000014.9 velvet.32476 99.5 True relocation, scaffold gap is present, inconsistency = 35669476 76862539 76863177 57018 56380 NC_000014.9 velvet.32476 99.84 True local misassembly 76863191 76864393 58231 57029 NC_000014.9 velvet.32476 99.92 True fake: scaffold gap size wrong estimation (local) 76857186 76858183 59239 58242 NC_000014.9 velvet.32476 100.0 True relocation, scaffold gap is present, inconsistency = 14148 76841981 76843027 60304 59250 NC_000014.9 velvet.32476 99.15 True local misassembly 76845919 76847279 61676 60315 NC_000014.9 velvet.32476 99.85 True relocation, scaffold gap is present, inconsistency = 20737240 56103606 56106770 63585 67168 NC_000014.9 velvet.32476 99.87 True relocation, scaffold gap is present, inconsistency = 20751867 76859936 76862265 70796 68467 NC_000014.9 velvet.32476 99.96 True relocation, scaffold gap is present, inconsistency = 20757638 56091868 56102287 70807 81512 NC_000014.9 velvet.32476 99.98 True fake: scaffold gap size wrong estimation (local) 56118645 56121250 100079 102684 NC_000014.9 velvet.32476 100.0 True fake: scaffold gap size wrong estimation (local) 56122630 56155595 104762 138386 NC_000014.9 velvet.32476 99.88 True fake: scaffold gap size wrong estimation (local) 56155884 56158071 139500 141687 NC_000014.9 velvet.32476 99.95 True relocation, scaffold gap is present, inconsistency = 21487530 77645612 77646191 141698 142277 NC_000014.9 velvet.32476 100.0 True local misassembly 77646456 77647421 142278 143243 NC_000014.9 velvet.32476 98.86 True fake: scaffold gap size wrong estimation (local) 77648735 77649873 145502 146687 NC_000014.9 velvet.32476 99.63 True local misassembly 77647648 77648329 146698 147379 NC_000014.9 velvet.32476 100.0 True fake: scaffold gap size wrong estimation (local) 77654904 77655599 147390 148085 NC_000014.9 velvet.32476 99.71 True local misassembly 77653511 77654559 148324 149372 NC_000014.9 velvet.32476 99.62 True fake: scaffold gap size wrong estimation (local) 77656073 77657007 150597 151531 NC_000014.9 velvet.32476 98.93 True local misassembly 77650893 77651434 151959 152500 NC_000014.9 velvet.32476 100.0 True fake: scaffold gap size wrong estimation (local) 77658043 77658612 153050 153619 NC_000014.9 velvet.32476 98.25 True fake: scaffold gap size wrong estimation (local) 77658750 77659292 154182 154724 NC_000014.9 velvet.32476 99.82 True fake: scaffold gap size wrong estimation (local) 77659880 77660477 155864 156461 NC_000014.9 velvet.32476 98.33 True local misassembly 77660737 77661426 156462 157151 NC_000014.9 velvet.32476 98.26 True fake: scaffold gap size wrong estimation (local) 77662367 77664586 159145 161351 NC_000014.9 velvet.32476 99.23 True relocation, scaffold gap is present, inconsistency = 27354236 50307090 50308120 162392 161362 NC_000014.9 velvet.32476 100.0 True fake: scaffold gap size wrong estimation (local) 50304807 50306034 165497 164270 NC_000014.9 velvet.32476 99.19 True local misassembly 50303813 50304549 166234 165498 NC_000014.9 velvet.32476 100.0 True fake: scaffold gap size wrong estimation (local) 50300766 50303131 170267 167866 NC_000014.9 velvet.32476 98.5 True inversion, scaffold gap is present 50292839 50295320 170278 172733 NC_000014.9 velvet.32476 98.9 True fake: scaffold gap size wrong estimation (local) 50296402 50297998 174745 176341 NC_000014.9 velvet.32476 100.0 True fake: scaffold gap size wrong estimation (local) 50298590 50300303 177861 179571 NC_000014.9 velvet.32476 99.82 True inversion, scaffold gap is present 50291057 50292438 181011 179582 NC_000014.9 velvet.32476 100.0 True fake: scaffold gap size wrong estimation (local) 50288694 50289980 184201 182915 NC_000014.9 velvet.32476 99.22 True local misassembly 50287970 50288488 184720 184202 NC_000014.9 velvet.32476 100.0 True fake: scaffold gap size wrong estimation (local) 50285216 50287682 188435 185930 NC_000014.9 velvet.32476 99.96 True fake: scaffold gap size wrong estimation (local) 50283048 50284964 191416 189500 NC_000014.9 velvet.32476 100.0 True fake: scaffold gap size wrong estimation (local) 50282115 50282809 192692 191998 NC_000014.9 velvet.32476 100.0 True relocation, scaffold gap is present, inconsistency = -22666799 72946261 72948212 195369 193394 NC_000014.9 velvet.32476 98.58 True relocation, scaffold gap is present, inconsistency = 4729116 77677339 77678109 195380 196150 NC_000014.9 velvet.32476 99.87 True relocation, scaffold gap is present, inconsistency = 27396004 50280423 50281324 197352 196161 NC_000014.9 velvet.32476 95.83 True fake: scaffold gap size wrong estimation (local) 50277801 50279807 200401 198396 NC_000014.9 velvet.32476 99.95 True fake: scaffold gap size wrong estimation (local) 50274554 50277492 204440 201502 NC_000014.9 velvet.32476 100.0 True relocation, scaffold gap is present, inconsistency = -22666151 72939201 72940588 205944 204557 NC_000014.9 velvet.32476 100.0 True fake: scaffold gap size wrong estimation (local) 72937690 72938916 208045 206819 NC_000014.9 velvet.32476 99.67 True relocation, scaffold gap is present, inconsistency = 22611703 50318026 50320115 213917 216006 NC_000014.9 velvet.32476 100.0 True fake: scaffold gap size wrong estimation (local) 50320373 50323100 219084 221811 NC_000014.9 velvet.32476 100.0 True fake: scaffold gap size wrong estimation (local) 50323697 50324799 223108 224210 NC_000014.9 velvet.32476 100.0 True fake: scaffold gap size wrong estimation (local) 50325078 50325976 224396 225294 NC_000014.9 velvet.32476 100.0 True CONTIG velvet.32476 225294 misassembled CONTIG velvet.32482 215 unaligned 53253970 53254576 1 607 NC_000014.9 velvet.32503 99.51 True CONTIG velvet.32503 3727 correct CONTIG velvet.32548 3906 unaligned CONTIG velvet.32556 382 unaligned CONTIG velvet.32568 873 unaligned 60200606 60201107 1 502 NC_000014.9 velvet.32576 99.8 True CONTIG velvet.32576 502 correct CONTIG velvet.32607 3701 unaligned CONTIG velvet.32705 805 unaligned CONTIG velvet.32757 220 unaligned CONTIG velvet.32765 261 unaligned CONTIG velvet.32773 347 unaligned CONTIG velvet.32774 284 unaligned CONTIG velvet.32781 206 unaligned CONTIG velvet.32821 205 unaligned CONTIG velvet.32853 271 unaligned CONTIG velvet.32872 275 unaligned 71822757 71823875 1 1119 NC_000014.9 velvet.32880 100.0 True fake: scaffold gap size wrong estimation (local) 71850972 71851828 21680 22536 NC_000014.9 velvet.32880 99.77 True fake: scaffold gap size wrong estimation (local) 71852127 71852999 22844 23715 NC_000014.9 velvet.32880 99.54 True CONTIG velvet.32880 23715 correct 85038507 85039672 1 1195 NC_000014.9 velvet.32910 97.49 True CONTIG velvet.32910 1195 correct CONTIG velvet.32912 252 unaligned CONTIG velvet.32935 318 unaligned CONTIG velvet.32973 239 unaligned CONTIG velvet.32979 275 unaligned CONTIG velvet.33049 255 unaligned 51237539 51238339 1610 810 NC_000014.9 velvet.33088 100.0 True CONTIG velvet.33088 1629 correct_unaligned CONTIG velvet.33119 281 unaligned CONTIG velvet.33198 241 unaligned CONTIG velvet.33224 207 unaligned 88117293 88118663 1997 627 NC_000014.9 velvet.33225 100.0 True fake: scaffold gap size wrong estimation (local) 88102634 88103756 10925 9802 NC_000014.9 velvet.33225 99.64 True fake: scaffold gap size wrong estimation (local) 88100465 88102347 13803 11921 NC_000014.9 velvet.33225 100.0 True fake: scaffold gap size wrong estimation (local) 88098891 88100275 15620 14236 NC_000014.9 velvet.33225 99.93 True fake: scaffold gap size wrong estimation (local) 88064759 88075297 50567 39916 NC_000014.9 velvet.33225 99.85 True fake: scaffold gap size wrong estimation (local) 88061425 88064489 54745 51601 NC_000014.9 velvet.33225 99.51 True relocation, scaffold gap is present, inconsistency = 137133 87922154 87924243 54794 56883 NC_000014.9 velvet.33225 99.95 True fake: scaffold gap size wrong estimation (local) 87924496 87927170 58002 60620 NC_000014.9 velvet.33225 97.79 True fake: scaffold gap size wrong estimation (local) 87927437 87929165 61746 63474 NC_000014.9 velvet.33225 99.65 True fake: scaffold gap size wrong estimation (local) 87932326 87959488 68376 97040 NC_000014.9 velvet.33225 99.15 True fake: scaffold gap size wrong estimation (local) 87959882 87970646 97846 108600 NC_000014.9 velvet.33225 98.94 True fake: scaffold gap size wrong estimation (local) 87970904 87976676 109650 115418 NC_000014.9 velvet.33225 99.79 True fake: scaffold gap size wrong estimation (local) 87976854 87978096 116184 117426 NC_000014.9 velvet.33225 99.76 True relocation, scaffold gap is present, inconsistency = 79673 88058551 88059596 119253 118208 NC_000014.9 velvet.33225 99.33 True fake: scaffold gap size wrong estimation (local) 88052038 88052591 126811 126258 NC_000014.9 velvet.33225 100.0 True fake: scaffold gap size wrong estimation (local) 88043581 88046667 131482 128397 NC_000014.9 velvet.33225 99.84 True fake: scaffold gap size wrong estimation (local) 88033389 88043025 142839 132791 NC_000014.9 velvet.33225 99.99 True fake: scaffold gap size wrong estimation (local) 88025090 88031887 151883 145085 NC_000014.9 velvet.33225 99.9 True relocation, scaffold gap is present, inconsistency = 11932 88007827 88013147 151894 157214 NC_000014.9 velvet.33225 99.87 True relocation, scaffold gap is present, inconsistency = -8628 88004530 88007813 157225 160508 NC_000014.9 velvet.33225 99.88 True fake: scaffold gap size wrong estimation (local) 88013779 88018764 160519 165504 NC_000014.9 velvet.33225 99.94 True fake: scaffold gap size wrong estimation (local) 88019056 88024973 166642 172651 NC_000014.9 velvet.33225 99.53 True fake: scaffold gap size wrong estimation (extensive) 88032115 88032980 172662 173527 NC_000014.9 velvet.33225 100.0 True relocation, scaffold gap is present, inconsistency = 27619 87997646 88004485 180373 173538 NC_000014.9 velvet.33225 99.59 True fake: scaffold gap size wrong estimation (local) 87991475 87997367 187562 181493 NC_000014.9 velvet.33225 99.93 True fake: scaffold gap size wrong estimation (local) 87983273 87991222 196541 188589 NC_000014.9 velvet.33225 99.84 True fake: scaffold gap size wrong estimation (local) 87981302 87983057 199104 197349 NC_000014.9 velvet.33225 100.0 True fake: scaffold gap size wrong estimation (local) 87980354 87981215 200016 199155 NC_000014.9 velvet.33225 98.38 True local misassembly 87979288 87980093 200822 200017 NC_000014.9 velvet.33225 99.88 True relocation, scaffold gap is present, inconsistency = 71165 88056291 88057179 205855 206743 NC_000014.9 velvet.33225 99.1 True fake: scaffold gap size wrong estimation (local) 88059781 88061182 206754 208161 NC_000014.9 velvet.33225 99.43 True local misassembly 88057309 88058312 208322 209324 NC_000014.9 velvet.33225 99.5 True relocation, scaffold gap is present, inconsistency = -35112 88053287 88054716 239411 240883 NC_000014.9 velvet.33225 99.63 True CONTIG velvet.33225 240883 misassembled CONTIG velvet.33246 361 unaligned CONTIG velvet.33254 231 unaligned CONTIG velvet.33299 320 unaligned CONTIG velvet.33300 344 unaligned CONTIG velvet.33314 368 unaligned 106009241 106009948 1 708 NC_000014.9 velvet.33316 100.0 True CONTIG velvet.33316 708 correct CONTIG velvet.33328 368 unaligned CONTIG velvet.33335 232 unaligned CONTIG velvet.33348 212 unaligned 106280820 106283128 1057 3366 NC_000014.9 velvet.33364 99.44 True CONTIG velvet.33364 5336 correct CONTIG velvet.33373 387 unaligned CONTIG velvet.33376 757 unaligned 23193099 23193899 791 1 NC_000014.9 velvet.33408 98.74 True fake: scaffold gap size wrong estimation (local) 23189661 23191080 4863 3444 NC_000014.9 velvet.33408 99.93 True relocation, scaffold gap is present, inconsistency = 62439122 85630741 85631921 5402 6582 NC_000014.9 velvet.33408 100.0 True relocation, scaffold gap is present, inconsistency = -62445688 23186625 23187389 6974 7738 NC_000014.9 velvet.33408 99.87 True inversion, scaffold gap is present 23188581 23189542 10611 9650 NC_000014.9 velvet.33408 100.0 True fake: not a misassembly (possible transposable element) 85632633 85633581 10622 11570 NC_000014.9 velvet.33408 99.79 True fake: not a misassembly (possible transposable element) 23187480 23188494 12677 11663 NC_000014.9 velvet.33408 99.7 True fake: scaffold gap size wrong estimation (local) 23156264 23158366 40548 38446 NC_000014.9 velvet.33408 99.95 True fake: scaffold gap size wrong estimation (local) 23152578 23155984 45072 41602 NC_000014.9 velvet.33408 99.82 True CONTIG velvet.33408 45072 misassembled CONTIG velvet.33450 436 unaligned 20975219 20975768 1 550 NC_000014.9 velvet.33467 99.82 True CONTIG velvet.33467 882 correct 96756587 96758313 1 1706 NC_000014.9 velvet.33468 98.49 True relocation, scaffold gap is present, inconsistency = -7731 96750637 96751518 1761 2642 NC_000014.9 velvet.33468 99.77 True fake: scaffold gap size wrong estimation (local) 96758604 96761042 2911 5349 NC_000014.9 velvet.33468 99.96 True relocation, scaffold gap is present, inconsistency = -7589 96753472 96755813 5368 7709 NC_000014.9 velvet.33468 99.66 True fake: scaffold gap size wrong estimation (local) 96761284 96762115 7720 8551 NC_000014.9 velvet.33468 100.0 True fake: scaffold gap size wrong estimation (extensive) 96769193 96774640 8562 14161 NC_000014.9 velvet.33468 99.85 True fake: not a misassembly (possible transposable element) 96762136 96764523 15997 18384 NC_000014.9 velvet.33468 99.87 True fake: not a misassembly (possible transposable element) 96774924 96777313 18395 20784 NC_000014.9 velvet.33468 99.83 True fake: scaffold gap size wrong estimation (local) 96777398 96782776 21213 26843 NC_000014.9 velvet.33468 99.89 True CONTIG velvet.33468 26843 misassembled 21118578 21119140 1 563 NC_000014.9 velvet.33471 99.64 True CONTIG velvet.33471 563 correct CONTIG velvet.33476 276 unaligned 102301079 102301965 887 1 NC_000014.9 velvet.33504 100.0 True CONTIG velvet.33504 3843 correct 67475095 67476185 1464 330 NC_000014.9 velvet.33513 100.0 True CONTIG velvet.33513 1829 correct 95950058 95950766 1 709 NC_000014.9 velvet.33532 99.86 True CONTIG velvet.33532 716 correct CONTIG velvet.33542 270 unaligned CONTIG velvet.33588 281 unaligned CONTIG velvet.33640 347 unaligned CONTIG velvet.33643 256 unaligned CONTIG velvet.33657 385 unaligned CONTIG velvet.33674 232 unaligned CONTIG velvet.33689 201 unaligned 21174370 21175015 3500 4144 NC_000014.9 velvet.33735 99.54 True unknown 21176902 21177735 6650 7483 NC_000014.9 velvet.33735 99.76 True unknown CONTIG velvet.33735 10855 mis_unaligned 47295954 47298697 1 2827 NC_000014.9 velvet.33755 99.67 True fake: scaffold gap size wrong estimation (local) 47298988 47300492 3729 5219 NC_000014.9 velvet.33755 98.79 True fake: scaffold gap size wrong estimation (local) 47300699 47302999 5908 8192 NC_000014.9 velvet.33755 99.12 True fake: scaffold gap size wrong estimation (local) 47307750 47308512 8204 8966 NC_000014.9 velvet.33755 99.34 True CONTIG velvet.33755 8966 correct 69585550 69586064 1 515 NC_000014.9 velvet.33776 100.0 True fake: scaffold gap size wrong estimation (local) 69588602 69589481 3471 4350 NC_000014.9 velvet.33776 100.0 True CONTIG velvet.33776 4350 correct CONTIG velvet.33789 220 unaligned CONTIG velvet.33832 3783 unaligned 106140636 106141273 1 638 NC_000014.9 velvet.33869 99.53 True fake: scaffold gap size wrong estimation (local) 106143028 106144920 3178 5070 NC_000014.9 velvet.33869 99.74 True fake: scaffold gap size wrong estimation (local) 106145675 106146667 6734 7726 NC_000014.9 velvet.33869 99.8 True CONTIG velvet.33869 8124 correct CONTIG velvet.33896 402 unaligned CONTIG velvet.33917 237 unaligned 75217390 75218609 4415 3196 NC_000014.9 velvet.33926 99.92 True CONTIG velvet.33926 4476 correct 87672053 87672657 1 605 NC_000014.9 velvet.33972 100.0 True fake: scaffold gap size wrong estimation (local) 87672933 87682268 744 10935 NC_000014.9 velvet.33972 99.71 True relocation, scaffold gap is present, inconsistency = -10449 87664883 87671705 30248 22612 NC_000014.9 velvet.33972 99.93 True CONTIG velvet.33972 30248 misassembled CONTIG velvet.33997 355 unaligned 77601933 77602562 1 630 NC_000014.9 velvet.34018 99.68 True CONTIG velvet.34018 3819 correct CONTIG velvet.34021 486 unaligned 81586674 81590211 594 4223 NC_000014.9 velvet.34041 99.63 True CONTIG velvet.34041 4223 correct CONTIG velvet.34043 247 unaligned CONTIG velvet.34052 253 unaligned CONTIG velvet.34075 323 unaligned 34538602 34539475 1 875 NC_000014.9 velvet.34115 99.43 True CONTIG velvet.34115 875 correct 106040982 106041560 1 579 NC_000014.9 velvet.34227 100.0 True CONTIG velvet.34227 579 correct 49775897 49776680 1 784 NC_000014.9 velvet.34231 99.62 True fake: scaffold gap size wrong estimation (local) 49777026 49777569 1088 1628 NC_000014.9 velvet.34231 97.98 True CONTIG velvet.34231 1628 correct CONTIG velvet.34240 236 unaligned CONTIG velvet.34326 219 unaligned 73397155 73399344 1631 3785 NC_000014.9 velvet.34388 98.3 True CONTIG velvet.34388 32377 correct 88605597 88607821 2393 1 NC_000014.9 velvet.34405 99.9 True CONTIG velvet.34405 2393 correct 71840612 71841176 564 1 NC_000014.9 velvet.34473 99.47 True CONTIG velvet.34473 576 correct CONTIG velvet.34489 363 unaligned CONTIG velvet.34496 469 unaligned CONTIG velvet.34527 474 unaligned CONTIG velvet.34536 216 unaligned CONTIG velvet.34537 252 unaligned CONTIG velvet.34552 296 unaligned 23953540 23954274 3944 3210 NC_000014.9 velvet.34578 99.18 True fake: scaffold gap size wrong estimation (local) 23951468 23952312 7223 6379 NC_000014.9 velvet.34578 100.0 True CONTIG velvet.34578 7223 correct CONTIG velvet.34612 281 unaligned 93259898 93260568 1 671 NC_000014.9 velvet.34613 100.0 True CONTIG velvet.34613 671 correct CONTIG velvet.34620 295 unaligned CONTIG velvet.34691 209 unaligned CONTIG velvet.34710 230 unaligned 21515848 21516542 1816 2510 NC_000014.9 velvet.34716 100.0 True fake: scaffold gap size wrong estimation (local) 21517345 21518056 2872 3583 NC_000014.9 velvet.34716 98.6 True fake: scaffold gap size wrong estimation (local) 21518354 21519222 4662 5530 NC_000014.9 velvet.34716 99.65 True CONTIG velvet.34716 5530 correct CONTIG velvet.34727 274 unaligned 61504491 61505403 2426 3338 NC_000014.9 velvet.34761 99.89 True local misassembly 61503325 61504232 3962 4868 NC_000014.9 velvet.34761 99.56 True relocation, scaffold gap is present, inconsistency = -7807413 53697243 53701963 5292 10011 NC_000014.9 velvet.34761 99.89 True fake: scaffold gap size wrong estimation (local) 53702366 53705233 11221 14088 NC_000014.9 velvet.34761 99.9 True relocation, scaffold gap is present, inconsistency = -28619401 25085843 25088503 14099 16817 NC_000014.9 velvet.34761 100.0 True relocation, scaffold gap is present, inconsistency = 36413843 61502357 61503308 16828 17825 NC_000014.9 velvet.34761 99.79 True CONTIG velvet.34761 17962 misassembled 106128870 106129449 1 580 NC_000014.9 velvet.34782 99.66 True CONTIG velvet.34782 580 correct 28890387 28897330 7265 244 NC_000014.9 velvet.34789 99.99 True fake: scaffold gap size wrong estimation (local) 28888425 28890150 9821 8115 NC_000014.9 velvet.34789 98.89 True fake: scaffold gap size wrong estimation (local) 28866041 28866859 32250 31432 NC_000014.9 velvet.34789 100.0 True fake: scaffold gap size wrong estimation (extensive) 28851672 28853550 38152 36352 NC_000014.9 velvet.34789 95.85 True relocation, scaffold gap is present, inconsistency = -14584 28861416 28864865 42992 39543 NC_000014.9 velvet.34789 100.0 True fake: scaffold gap size wrong estimation (local) 28859043 28861242 46190 43991 NC_000014.9 velvet.34789 100.0 True fake: scaffold gap size wrong estimation (local) 28854820 28858761 51333 47243 NC_000014.9 velvet.34789 99.97 True relocation, scaffold gap is present, inconsistency = -32003 28884371 28884950 53785 53206 NC_000014.9 velvet.34789 100.0 True fake: scaffold gap size wrong estimation (local) 28874169 28883741 64856 55290 NC_000014.9 velvet.34789 99.92 True fake: scaffold gap size wrong estimation (local) 28872053 28873886 67648 65815 NC_000014.9 velvet.34789 100.0 True fake: scaffold gap size wrong estimation (local) 28869946 28871615 70462 68793 NC_000014.9 velvet.34789 99.94 True fake: scaffold gap size wrong estimation (local) 28843886 28846014 94588 92460 NC_000014.9 velvet.34789 100.0 True fake: scaffold gap size wrong estimation (local) 28842620 28843608 97318 96300 NC_000014.9 velvet.34789 95.59 True fake: scaffold gap size wrong estimation (local) 28841047 28842449 98840 97438 NC_000014.9 velvet.34789 100.0 True fake: scaffold gap size wrong estimation (local) 28829996 28836829 108258 101676 NC_000014.9 velvet.34789 96.32 True fake: scaffold gap size wrong estimation (local) 28826408 28829351 112910 109967 NC_000014.9 velvet.34789 100.0 True fake: scaffold gap size wrong estimation (local) 28824674 28826317 115181 113538 NC_000014.9 velvet.34789 100.0 True fake: scaffold gap size wrong estimation (local) 28818708 28824373 121874 116209 NC_000014.9 velvet.34789 100.0 True fake: scaffold gap size wrong estimation (local) 28816973 28818430 124385 122928 NC_000014.9 velvet.34789 98.83 True fake: scaffold gap size wrong estimation (local) 28815023 28815976 127019 126066 NC_000014.9 velvet.34789 100.0 True fake: scaffold gap size wrong estimation (local) 28813142 28814845 129089 127384 NC_000014.9 velvet.34789 100.0 True fake: scaffold gap size wrong estimation (local) 28807297 28812938 136424 129983 NC_000014.9 velvet.34789 99.98 True CONTIG velvet.34789 136424 misassembled CONTIG velvet.34808 451 unaligned CONTIG velvet.34814 219 unaligned 70431776 70433038 2750 4066 NC_000014.9 velvet.34869 95.56 True fake: scaffold gap size wrong estimation (local) 70434854 70435755 6635 7536 NC_000014.9 velvet.34869 99.67 True CONTIG velvet.34869 7536 correct CONTIG velvet.34882 213 unaligned 91025312 91026520 1210 1 NC_000014.9 velvet.34917 99.67 True fake: scaffold gap size wrong estimation (local) 91023546 91024892 3162 1820 NC_000014.9 velvet.34917 99.33 True CONTIG velvet.34917 4347 correct CONTIG velvet.34933 350 unaligned CONTIG velvet.34971 209 unaligned CONTIG velvet.35005 263 unaligned CONTIG velvet.35006 427 unaligned 27485272 27492437 1 8657 NC_000014.9 velvet.35037 99.04 True fake: scaffold gap size wrong estimation (local) 27494721 27496758 11573 13606 NC_000014.9 velvet.35037 99.61 True CONTIG velvet.35037 15270 correct CONTIG velvet.35085 296 unaligned 19111378 19113271 1894 1 NC_000014.9 velvet.35117 99.58 True CONTIG velvet.35117 1894 correct CONTIG velvet.35124 213 unaligned CONTIG velvet.35137 356 unaligned CONTIG velvet.35177 254 unaligned CONTIG velvet.35197 327 unaligned CONTIG velvet.35258 231 unaligned CONTIG velvet.35318 229 unaligned CONTIG velvet.35325 217 unaligned 47848685 47849208 1 524 NC_000014.9 velvet.35346 99.81 True fake: scaffold gap size wrong estimation (local) 47851645 47852228 5265 5883 NC_000014.9 velvet.35346 98.82 True fake: scaffold gap size wrong estimation (local) 47857440 47861253 6368 10187 NC_000014.9 velvet.35346 99.97 True fake: scaffold gap size wrong estimation (local) 47861479 47862075 10476 11072 NC_000014.9 velvet.35346 100.0 True fake: scaffold gap size wrong estimation (local) 47862335 47868779 12041 18170 NC_000014.9 velvet.35346 95.02 True fake: scaffold gap size wrong estimation (local) 47869528 47871063 19635 21172 NC_000014.9 velvet.35346 99.8 True fake: scaffold gap size wrong estimation (local) 47871270 47874049 22016 24795 NC_000014.9 velvet.35346 99.93 True fake: scaffold gap size wrong estimation (local) 47874354 47876194 25752 27591 NC_000014.9 velvet.35346 99.89 True fake: scaffold gap size wrong estimation (local) 47876466 47877776 28607 29917 NC_000014.9 velvet.35346 99.69 True fake: scaffold gap size wrong estimation (local) 47877863 47890591 30051 44135 NC_000014.9 velvet.35346 98.33 True fake: scaffold gap size wrong estimation (local) 47890895 47893069 45229 47403 NC_000014.9 velvet.35346 99.82 True CONTIG velvet.35346 47403 correct CONTIG velvet.35359 3622 unaligned 33718000 33718904 1 905 NC_000014.9 velvet.35363 99.89 True CONTIG velvet.35363 905 correct 79712672 79713497 875 1 NC_000014.9 velvet.35365 99.63 True CONTIG velvet.35365 875 correct CONTIG velvet.35412 297 unaligned 19032370 19033367 998 1 NC_000014.9 velvet.35457 99.9 True CONTIG velvet.35457 998 correct CONTIG velvet.35464 205 unaligned CONTIG velvet.35493 231 unaligned 26053059 26053610 1 552 NC_000014.9 velvet.35517 100.0 True CONTIG velvet.35517 552 correct CONTIG velvet.35529 222 unaligned CONTIG velvet.35564 3741 unaligned CONTIG velvet.35568 273 unaligned CONTIG velvet.35623 244 unaligned CONTIG velvet.35624 230 unaligned CONTIG velvet.35675 4783 unaligned CONTIG velvet.35700 548 unaligned CONTIG velvet.35719 203 unaligned 25065666 25068219 1965 4518 NC_000014.9 velvet.35730 99.92 True CONTIG velvet.35730 33182 correct CONTIG velvet.35752 204 unaligned CONTIG velvet.35760 252 unaligned CONTIG velvet.35795 204 unaligned CONTIG velvet.35827 237 unaligned 23247142 23248150 1 1009 NC_000014.9 velvet.35841 100.0 True fake: scaffold gap size wrong estimation (local) 23248716 23249334 1726 2344 NC_000014.9 velvet.35841 100.0 True fake: scaffold gap size wrong estimation (local) 23250697 23251245 3746 4283 NC_000014.9 velvet.35841 97.77 True CONTIG velvet.35841 4283 correct 102611860 102612354 1 500 NC_000014.9 velvet.35851 99.8 True CONTIG velvet.35851 3761 correct CONTIG velvet.35854 237 unaligned CONTIG velvet.35873 456 unaligned CONTIG velvet.35892 4149 unaligned CONTIG velvet.35920 3852 unaligned CONTIG velvet.35929 331 unaligned CONTIG velvet.35932 297 unaligned CONTIG velvet.35961 307 unaligned CONTIG velvet.35971 388 unaligned 67651705 67652829 1 1125 NC_000014.9 velvet.35978 100.0 True CONTIG velvet.35978 1125 correct CONTIG velvet.35980 307 unaligned CONTIG velvet.35984 3506 unaligned CONTIG velvet.36034 239 unaligned CONTIG velvet.36038 416 unaligned CONTIG velvet.36040 247 unaligned CONTIG velvet.36042 285 unaligned 69126397 69128207 1 1811 NC_000014.9 velvet.36046 100.0 True CONTIG velvet.36046 1811 correct CONTIG velvet.36071 203 unaligned 52672285 52672793 1 554 NC_000014.9 velvet.36093 100.0 True CONTIG velvet.36093 557 correct 50941855 50942568 1 714 NC_000014.9 velvet.36111 100.0 True CONTIG velvet.36111 1644 correct CONTIG velvet.36131 390 unaligned CONTIG velvet.36140 284 unaligned CONTIG velvet.36148 542 unaligned CONTIG velvet.36174 293 unaligned CONTIG velvet.36204 266 unaligned CONTIG velvet.36306 374 unaligned CONTIG velvet.36320 306 unaligned CONTIG velvet.36343 500 unaligned 77869423 77869994 1 572 NC_000014.9 velvet.36365 99.83 True CONTIG velvet.36365 572 correct 74228560 74229642 1 1083 NC_000014.9 velvet.36369 99.91 True CONTIG velvet.36369 1083 correct 96338376 96339059 684 1 NC_000014.9 velvet.36374 100.0 True CONTIG velvet.36374 684 correct CONTIG velvet.36375 224 unaligned 77992460 77993009 4101 3552 NC_000014.9 velvet.36399 99.82 True CONTIG velvet.36399 4101 correct CONTIG velvet.36405 240 unaligned CONTIG velvet.36412 3762 unaligned 82028166 82028709 1 591 NC_000014.9 velvet.36426 98.93 True CONTIG velvet.36426 652 correct CONTIG velvet.36432 306 unaligned 54453168 54453920 1 753 NC_000014.9 velvet.36437 100.0 True CONTIG velvet.36437 753 correct 93884416 93886304 3735 1847 NC_000014.9 velvet.36474 99.79 True CONTIG velvet.36474 3735 correct CONTIG velvet.36509 239 unaligned CONTIG velvet.36546 392 unaligned CONTIG velvet.36554 236 unaligned 36047659 36049305 1 1647 NC_000014.9 velvet.36564 100.0 True relocation, scaffold gap is present, inconsistency = -10817 36040600 36042362 3759 5510 NC_000014.9 velvet.36564 99.26 True CONTIG velvet.36564 5510 misassembled CONTIG velvet.36565 209 unaligned CONTIG velvet.36615 238 unaligned CONTIG velvet.36634 329 unaligned 105939788 105942639 22993 25844 NC_000014.9 velvet.36655 99.96 True fake: scaffold gap size wrong estimation (local) 105945190 105947244 29228 31282 NC_000014.9 velvet.36655 100.0 True fake: scaffold gap size wrong estimation (local) 105948483 105949341 33263 34104 NC_000014.9 velvet.36655 97.88 True CONTIG velvet.36655 37864 correct CONTIG velvet.36667 222 unaligned CONTIG velvet.36676 364 unaligned CONTIG velvet.36677 207 unaligned CONTIG velvet.36705 463 unaligned CONTIG velvet.36731 430 unaligned CONTIG velvet.36749 292 unaligned CONTIG velvet.36764 259 unaligned CONTIG velvet.36819 206 unaligned CONTIG velvet.36847 229 unaligned 50566273 50569201 1 2984 NC_000014.9 velvet.36852 98.09 True fake: scaffold gap size wrong estimation (local) 50569449 50572904 3895 7350 NC_000014.9 velvet.36852 99.94 True relocation, scaffold gap is present, inconsistency = 39515625 90099070 90101625 17891 20385 NC_000014.9 velvet.36852 97.6 True fake: scaffold gap size wrong estimation (local) 90102171 90103027 22287 23143 NC_000014.9 velvet.36852 99.88 True local misassembly 90103848 90104497 23469 24118 NC_000014.9 velvet.36852 98.46 True CONTIG velvet.36852 26225 misassembled CONTIG velvet.36857 292 unaligned CONTIG velvet.36861 271 unaligned CONTIG velvet.36863 389 unaligned 88370033 88370604 3418 3989 NC_000014.9 velvet.36892 99.48 True CONTIG velvet.36892 8908 correct_unaligned 19055569 19056384 1 816 NC_000014.9 velvet.36913 99.63 True CONTIG velvet.36913 816 correct 46224327 46224863 1 537 NC_000014.9 velvet.36915 100.0 True CONTIG velvet.36915 537 correct CONTIG velvet.36920 311 unaligned CONTIG velvet.36943 365 unaligned CONTIG velvet.36978 300 unaligned CONTIG velvet.36983 352 unaligned 24490580 24491772 3889 2702 NC_000014.9 velvet.37015 99.24 True CONTIG velvet.37015 3889 correct CONTIG velvet.37032 272 unaligned CONTIG velvet.37060 221 unaligned CONTIG velvet.37064 212 unaligned 90222733 90223830 28058 26961 NC_000014.9 velvet.37077 99.45 True relocation, scaffold gap is present, inconsistency = 64912990 25307475 25309475 30327 28326 NC_000014.9 velvet.37077 99.15 True relocation, scaffold gap is present, inconsistency = -8290 25310314 25315742 36565 30350 NC_000014.9 velvet.37077 99.63 True CONTIG velvet.37077 41873 misassembled 66829358 66831892 2535 1 NC_000014.9 velvet.37080 100.0 True fake: scaffold gap size wrong estimation (local) 66827285 66829077 5203 3411 NC_000014.9 velvet.37080 100.0 True fake: scaffold gap size wrong estimation (local) 66819609 66822006 7611 5214 NC_000014.9 velvet.37080 100.0 True relocation, scaffold gap is present, inconsistency = -7644 66823262 66827242 11586 7622 NC_000014.9 velvet.37080 99.6 True fake: scaffold gap size wrong estimation (local) 66822219 66823017 13481 12683 NC_000014.9 velvet.37080 100.0 True CONTIG velvet.37080 13481 misassembled CONTIG velvet.37105 451 unaligned CONTIG velvet.37114 412 unaligned CONTIG velvet.37135 376 unaligned CONTIG velvet.37136 205 unaligned CONTIG velvet.37165 219 unaligned CONTIG velvet.37173 201 unaligned 21938804 21944788 48 7460 NC_000014.9 velvet.37177 99.95 True CONTIG velvet.37177 37898 correct CONTIG velvet.37182 371 unaligned CONTIG velvet.37191 211 unaligned CONTIG velvet.37193 406 unaligned 59613807 59615197 1 1395 NC_000014.9 velvet.37199 99.93 True fake: scaffold gap size wrong estimation (local) 59615457 59617264 1770 3577 NC_000014.9 velvet.37199 99.89 True CONTIG velvet.37199 3577 correct 38601868 38603127 1218 1 NC_000014.9 velvet.37209 96.08 True CONTIG velvet.37209 4764 correct CONTIG velvet.37217 218 unaligned CONTIG velvet.37230 237 unaligned CONTIG velvet.37257 399 unaligned 88692352 88693321 970 1 NC_000014.9 velvet.37258 99.79 True CONTIG velvet.37258 970 correct CONTIG velvet.37287 366 unaligned 35031947 35032676 29731 29002 NC_000014.9 velvet.37346 98.63 True unknown 35025032 35025947 50607 51522 NC_000014.9 velvet.37346 99.89 True unknown 35028070 35029747 53210 51533 NC_000014.9 velvet.37346 99.94 True unknown CONTIG velvet.37346 63264 mis_unaligned CONTIG velvet.37406 219 unaligned CONTIG velvet.37462 236 unaligned CONTIG velvet.37474 3697 unaligned CONTIG velvet.37481 453 unaligned CONTIG velvet.37486 435 unaligned 20643650 20646553 384 3353 NC_000014.9 velvet.37557 99.83 True fake: scaffold gap size wrong estimation (local) 20647615 20648684 5458 6527 NC_000014.9 velvet.37557 100.0 True CONTIG velvet.37557 6527 correct CONTIG velvet.37566 289 unaligned CONTIG velvet.37575 430 unaligned 21413607 21415530 2545 4468 NC_000014.9 velvet.37602 100.0 True fake: scaffold gap size wrong estimation (local) 21415531 21416536 4856 5861 NC_000014.9 velvet.37602 97.12 True fake: scaffold gap size wrong estimation (local) 21453310 21453912 41603 42205 NC_000014.9 velvet.37602 100.0 True CONTIG velvet.37602 42397 correct CONTIG velvet.37632 404 unaligned CONTIG velvet.37646 251 unaligned CONTIG velvet.37647 211 unaligned CONTIG velvet.37709 244 unaligned 92180412 92181107 698 3 NC_000014.9 velvet.37753 99.86 True CONTIG velvet.37753 698 correct 86597924 86598821 1 898 NC_000014.9 velvet.37760 99.67 True CONTIG velvet.37760 898 correct CONTIG velvet.37762 322 unaligned 18683887 18684566 6925 7604 NC_000014.9 velvet.37832 100.0 True fake: scaffold gap size wrong estimation (local) 18684810 18685441 8255 8885 NC_000014.9 velvet.37832 99.84 True fake: scaffold gap size wrong estimation (local) 18685693 18686246 9153 9706 NC_000014.9 velvet.37832 100.0 True fake: scaffold gap size wrong estimation (local) 18686653 18689554 10943 13844 NC_000014.9 velvet.37832 99.93 True fake: scaffold gap size wrong estimation (local) 18690155 18690793 15271 15909 NC_000014.9 velvet.37832 100.0 True fake: scaffold gap size wrong estimation (local) 18691513 18692429 16641 17557 NC_000014.9 velvet.37832 99.67 True fake: scaffold gap size wrong estimation (local) 18692643 18694158 18422 19937 NC_000014.9 velvet.37832 99.87 True fake: scaffold gap size wrong estimation (local) 18694400 18695496 20656 21790 NC_000014.9 velvet.37832 99.14 True CONTIG velvet.37832 21790 correct 79314914 79316978 2107 1 NC_000014.9 velvet.37848 99.95 True CONTIG velvet.37848 2107 correct CONTIG velvet.37912 243 unaligned CONTIG velvet.38054 260 unaligned CONTIG velvet.38112 334 unaligned CONTIG velvet.38137 286 unaligned CONTIG velvet.38195 252 unaligned CONTIG velvet.38201 243 unaligned CONTIG velvet.38208 233 unaligned CONTIG velvet.38222 220 unaligned CONTIG velvet.38224 387 unaligned CONTIG velvet.38268 3763 unaligned 88413038 88413918 1086 206 NC_000014.9 velvet.38323 99.77 True CONTIG velvet.38323 4200 correct CONTIG velvet.38326 217 unaligned CONTIG velvet.38327 257 unaligned 24244843 24245481 1 638 NC_000014.9 velvet.38334 99.69 True CONTIG velvet.38334 1006 correct 85085012 85101581 19433 800 NC_000014.9 velvet.38353 99.6 True relocation, scaffold gap is present, inconsistency = 35769759 49314213 49315242 20473 19444 NC_000014.9 velvet.38353 99.9 True fake: scaffold gap size wrong estimation (local) 49311744 49313954 23581 21371 NC_000014.9 velvet.38353 99.91 True CONTIG velvet.38353 23802 misassembled CONTIG velvet.38369 258 unaligned CONTIG velvet.38373 257 unaligned CONTIG velvet.38416 259 unaligned CONTIG velvet.38418 286 unaligned 23472464 23473061 871 1468 NC_000014.9 velvet.38425 99.83 True CONTIG velvet.38425 1468 correct 19490498 19491026 1 529 NC_000014.9 velvet.38436 99.05 True CONTIG velvet.38436 529 correct CONTIG velvet.38472 326 unaligned CONTIG velvet.38485 384 unaligned 55523276 55523779 504 1 NC_000014.9 velvet.38505 100.0 True CONTIG velvet.38505 4063 correct_unaligned 37815451 37816065 1 615 NC_000014.9 velvet.38507 100.0 True CONTIG velvet.38507 615 correct CONTIG velvet.38532 213 unaligned CONTIG velvet.38555 247 unaligned CONTIG velvet.38619 442 unaligned 40466215 40467163 1 948 NC_000014.9 velvet.38626 99.68 True CONTIG velvet.38626 948 correct CONTIG velvet.38628 425 unaligned 53265582 53266433 1 852 NC_000014.9 velvet.38642 100.0 True CONTIG velvet.38642 855 correct CONTIG velvet.38718 246 unaligned 60824055 60826314 1 2246 NC_000014.9 velvet.38721 99.29 True fake: scaffold gap size wrong estimation (local) 60826617 60831285 3332 8128 NC_000014.9 velvet.38721 99.85 True CONTIG velvet.38721 11491 correct 28210149 28210919 1645 2414 NC_000014.9 velvet.38735 98.44 True CONTIG velvet.38735 2414 correct_unaligned CONTIG velvet.38766 303 unaligned 71841198 71841934 3124 3860 NC_000014.9 velvet.38797 99.73 True CONTIG velvet.38797 3860 correct CONTIG velvet.38800 492 unaligned CONTIG velvet.38807 223 unaligned 53125973 53126515 543 1 NC_000014.9 velvet.38828 100.0 True fake: scaffold gap size wrong estimation (local) 53123418 53123946 3930 3402 NC_000014.9 velvet.38828 100.0 True local misassembly 53124237 53125688 5392 3941 NC_000014.9 velvet.38828 99.93 True fake: scaffold gap size wrong estimation (local) 53121719 53122566 8768 7961 NC_000014.9 velvet.38828 95.23 True CONTIG velvet.38828 19769 correct CONTIG velvet.38891 288 unaligned CONTIG velvet.38942 332 unaligned 54706618 54707119 9 510 NC_000014.9 velvet.38967 99.8 True CONTIG velvet.38967 510 correct 44632563 44633113 1 551 NC_000014.9 velvet.38986 100.0 True CONTIG velvet.38986 551 correct CONTIG velvet.39017 285 unaligned 105081201 105081726 1 526 NC_000014.9 velvet.39022 100.0 True CONTIG velvet.39022 526 correct CONTIG velvet.39044 416 unaligned 24970243 24973100 2843 1 NC_000014.9 velvet.39055 99.48 True CONTIG velvet.39055 2843 correct CONTIG velvet.39059 286 unaligned CONTIG velvet.39064 430 unaligned CONTIG velvet.39076 202 unaligned CONTIG velvet.39085 295 unaligned 28194440 28197192 2780 1 NC_000014.9 velvet.39099 99.96 True relocation, scaffold gap is present, inconsistency = 5426562 22745610 22746423 24235 25050 NC_000014.9 velvet.39099 99.63 True fake: scaffold gap size wrong estimation (local) 22746672 22747476 25635 26439 NC_000014.9 velvet.39099 100.0 True relocation, scaffold gap is present, inconsistency = 5416440 28165235 28168408 30932 27758 NC_000014.9 velvet.39099 99.87 True fake: scaffold gap size wrong estimation (local) 28162173 28164948 34902 31902 NC_000014.9 velvet.39099 99.96 True fake: scaffold gap size wrong estimation (local) 28137515 28139498 62771 60788 NC_000014.9 velvet.39099 99.9 True CONTIG velvet.39099 62771 misassembled CONTIG velvet.39102 464 unaligned 90832773 90833770 998 1 NC_000014.9 velvet.39105 99.9 True fake: scaffold gap size wrong estimation (local) 90830609 90832292 3923 2240 NC_000014.9 velvet.39105 99.94 True fake: scaffold gap size wrong estimation (local) 90829587 90830453 5123 4257 NC_000014.9 velvet.39105 100.0 True CONTIG velvet.39105 5313 correct CONTIG velvet.39144 212 unaligned CONTIG velvet.39152 218 unaligned 18976225 18977279 1055 1 NC_000014.9 velvet.39158 99.62 True CONTIG velvet.39158 1055 correct CONTIG velvet.39169 220 unaligned CONTIG velvet.39172 312 unaligned 20543708 20546074 3506 5909 NC_000014.9 velvet.39212 99.45 True CONTIG velvet.39212 5909 correct CONTIG velvet.39226 553 unaligned CONTIG velvet.39246 277 unaligned CONTIG velvet.39253 715 unaligned 106879225 106880147 1 923 NC_000014.9 velvet.39260 99.89 True CONTIG velvet.39260 1286 correct CONTIG velvet.39290 217 unaligned CONTIG velvet.39300 270 unaligned CONTIG velvet.39310 349 unaligned 104941924 104942448 1 525 NC_000014.9 velvet.39339 99.62 True CONTIG velvet.39339 4198 correct_unaligned CONTIG velvet.39373 453 unaligned CONTIG velvet.39389 218 unaligned CONTIG velvet.39441 324 unaligned CONTIG velvet.39454 240 unaligned CONTIG velvet.39516 342 unaligned CONTIG velvet.39524 216 unaligned CONTIG velvet.39528 3810 unaligned CONTIG velvet.39544 411 unaligned 74020757 74021348 1 592 NC_000014.9 velvet.39586 100.0 True CONTIG velvet.39586 592 correct 20624678 20626022 405 1749 NC_000014.9 velvet.39587 99.26 True local misassembly 20626241 20626914 1750 2423 NC_000014.9 velvet.39587 98.52 True CONTIG velvet.39587 2423 correct CONTIG velvet.39595 270 unaligned CONTIG velvet.39618 417 unaligned 83564560 83565316 757 1 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 83563050 83564300 2133 883 NC_000014.9 velvet.39648 99.84 True fake: scaffold gap size wrong estimation (local) 83547560 83562683 19342 3400 NC_000014.9 velvet.39648 99.64 True fake: scaffold gap size wrong estimation (local) 83545809 83547287 21773 20295 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 83542250 83545504 25887 22633 NC_000014.9 velvet.39648 99.94 True relocation, scaffold gap is present, inconsistency = 82658 83454496 83456478 29001 30969 NC_000014.9 velvet.39648 99.19 True fake: scaffold gap size wrong estimation (local) 83456639 83460377 31756 35394 NC_000014.9 velvet.39648 96.87 True fake: scaffold gap size wrong estimation (local) 83460484 83478006 36297 53947 NC_000014.9 velvet.39648 99.37 True relocation, scaffold gap is present, inconsistency = 38410 83516427 83518282 55813 53958 NC_000014.9 velvet.39648 99.89 True fake: scaffold gap size wrong estimation (local) 83514598 83516140 58171 56629 NC_000014.9 velvet.39648 99.94 True relocation, scaffold gap is present, inconsistency = 27169 83478091 83485284 60316 67509 NC_000014.9 velvet.39648 99.89 True fake: scaffold gap size wrong estimation (local) 83485464 83487206 68313 70055 NC_000014.9 velvet.39648 99.83 True fake: scaffold gap size wrong estimation (local) 83487289 83494075 70772 78310 NC_000014.9 velvet.39648 99.66 True fake: scaffold gap size wrong estimation (local) 83494454 83499390 79265 84503 NC_000014.9 velvet.39648 99.84 True fake: scaffold gap size wrong estimation (local) 83499540 83502892 85423 88832 NC_000014.9 velvet.39648 99.94 True fake: scaffold gap size wrong estimation (local) 83503178 83507067 89954 93843 NC_000014.9 velvet.39648 99.87 True fake: scaffold gap size wrong estimation (local) 83507306 83513676 94881 101306 NC_000014.9 velvet.39648 99.81 True fake: scaffold gap size wrong estimation (local) 83518394 83524243 101938 107863 NC_000014.9 velvet.39648 99.76 True fake: scaffold gap size wrong estimation (local) 83524543 83527551 108962 111954 NC_000014.9 velvet.39648 99.17 True fake: scaffold gap size wrong estimation (local) 83527859 83529233 112676 114552 NC_000014.9 velvet.39648 99.93 True fake: scaffold gap size wrong estimation (local) 83529529 83530848 114806 116125 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 83531290 83534592 117375 120677 NC_000014.9 velvet.39648 99.91 True fake: scaffold gap size wrong estimation (local) 83534861 83536529 121539 123193 NC_000014.9 velvet.39648 99.1 True fake: scaffold gap size wrong estimation (local) 83536910 83540662 124312 128118 NC_000014.9 velvet.39648 99.86 True fake: scaffold gap size wrong estimation (local) 83540903 83541509 128675 129281 NC_000014.9 velvet.39648 100.0 True relocation, scaffold gap is present, inconsistency = 11502480 95059837 95062557 147853 145129 NC_000014.9 velvet.39648 99.82 True fake: scaffold gap size wrong estimation (local) 95053970 95055931 149825 147864 NC_000014.9 velvet.39648 99.8 True relocation, scaffold gap is present, inconsistency = 11472481 83565799 83580408 150906 165636 NC_000014.9 velvet.39648 99.99 True fake: scaffold gap size wrong estimation (local) 83580678 83582442 166736 168500 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 83583038 83589927 169751 176904 NC_000014.9 velvet.39648 99.34 True fake: scaffold gap size wrong estimation (local) 83590246 83591358 177749 179035 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 83592490 83593044 180514 181068 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 83593045 83594594 181410 182959 NC_000014.9 velvet.39648 99.94 True fake: scaffold gap size wrong estimation (local) 83594844 83602461 183970 191569 NC_000014.9 velvet.39648 99.68 True fake: scaffold gap size wrong estimation (local) 83624622 83627323 208970 211716 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 83627574 83628134 212413 212973 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 83629509 83636147 214826 222295 NC_000014.9 velvet.39648 99.86 True fake: scaffold gap size wrong estimation (local) 83636262 83639327 223142 226207 NC_000014.9 velvet.39648 99.8 True relocation, scaffold gap is present, inconsistency = 181808 83446466 83454443 234246 226218 NC_000014.9 velvet.39648 99.75 True fake: scaffold gap size wrong estimation (local) 83435990 83446344 246188 235145 NC_000014.9 velvet.39648 99.8 True fake: scaffold gap size wrong estimation (local) 83434807 83435879 247966 246901 NC_000014.9 velvet.39648 98.78 True fake: scaffold gap size wrong estimation (local) 83429603 83433938 253548 249213 NC_000014.9 velvet.39648 99.82 True fake: scaffold gap size wrong estimation (local) 83428075 83429357 255706 254424 NC_000014.9 velvet.39648 99.92 True fake: scaffold gap size wrong estimation (local) 83411962 83427855 274821 256350 NC_000014.9 velvet.39648 99.43 True fake: scaffold gap size wrong estimation (local) 83408014 83411663 279441 275792 NC_000014.9 velvet.39648 99.95 True fake: scaffold gap size wrong estimation (local) 83391056 83407926 297342 280250 NC_000014.9 velvet.39648 99.61 True fake: scaffold gap size wrong estimation (local) 83383484 83390882 306103 298378 NC_000014.9 velvet.39648 99.64 True fake: scaffold gap size wrong estimation (local) 83378528 83383325 311830 307033 NC_000014.9 velvet.39648 99.92 True relocation, scaffold gap is present, inconsistency = 30699053 52678259 52679464 311841 313046 NC_000014.9 velvet.39648 99.75 True fake: scaffold gap size wrong estimation (local) 52680105 52681339 314680 315914 NC_000014.9 velvet.39648 99.03 True relocation, scaffold gap is present, inconsistency = 30662358 83344777 83352176 316994 324393 NC_000014.9 velvet.39648 99.91 True inversion, scaffold gap is present 83352223 83357551 329732 324404 NC_000014.9 velvet.39648 99.92 True relocation, inconsistency = 30658865 52691019 52693357 332119 329733 NC_000014.9 velvet.39648 99.66 True fake: scaffold gap size wrong estimation (local) 52689668 52690427 334316 333557 NC_000014.9 velvet.39648 100.0 True fake: not a misassembly (possible transposable element) 52687441 52689016 334327 335902 NC_000014.9 velvet.39648 99.94 True fake: not a misassembly (possible transposable element) 52684810 52686592 341191 339409 NC_000014.9 velvet.39648 99.83 True indel: indel (<= 5bp) 52684127 52684809 341875 341193 NC_000014.9 velvet.39648 99.41 True local misassembly 52683200 52684126 343295 342369 NC_000014.9 velvet.39648 97.84 True relocation, scaffold gap is present, inconsistency = -30662472 83343224 83344456 345743 344511 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 83330907 83341654 359628 347955 NC_000014.9 velvet.39648 99.88 True relocation, scaffold gap is present, inconsistency = 30679906 52647282 52650990 364067 359639 NC_000014.9 velvet.39648 99.86 True fake: scaffold gap size wrong estimation (local) 52645991 52646964 366139 365166 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 52644304 52645305 367937 366936 NC_000014.9 velvet.39648 99.9 True relocation, scaffold gap is present, inconsistency = -9991979 62635112 62636272 369108 367948 NC_000014.9 velvet.39648 99.74 True relocation, scaffold gap is present, inconsistency = -20696523 83314140 83330337 387394 370406 NC_000014.9 velvet.39648 99.94 True fake: scaffold gap size wrong estimation (local) 83310469 83313856 391900 388419 NC_000014.9 velvet.39648 99.97 True fake: scaffold gap size wrong estimation (extensive) 83298556 83302536 395890 391911 NC_000014.9 velvet.39648 99.95 True fake: scaffold gap size wrong estimation (local) 83294162 83295955 403293 401500 NC_000014.9 velvet.39648 99.89 True indel: indel (> 5bp) 83292785 83294130 404639 403294 NC_000014.9 velvet.39648 99.33 True fake: not a misassembly (possible transposable element) 83302886 83306797 409588 405677 NC_000014.9 velvet.39648 99.95 True fake: not a misassembly (possible transposable element) 83285567 83292496 417303 409599 NC_000014.9 velvet.39648 99.88 True fake: scaffold gap size wrong estimation (local) 83275007 83285288 428615 418344 NC_000014.9 velvet.39648 99.56 True relocation, scaffold gap is present, inconsistency = 17341290 65932587 65933706 429745 428626 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 65925627 65932311 437437 430757 NC_000014.9 velvet.39648 99.91 True relocation, scaffold gap is present, inconsistency = -17349347 83269137 83274963 443274 437448 NC_000014.9 velvet.39648 99.9 True fake: scaffold gap size wrong estimation (local) 83266140 83268980 447009 444170 NC_000014.9 velvet.39648 99.93 True relocation, scaffold gap is present, inconsistency = 17351183 65906239 65914946 455796 447020 NC_000014.9 velvet.39648 99.79 True relocation, scaffold gap is present, inconsistency = -17359641 83264357 83265869 457319 455807 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 83259994 83264068 462546 458478 NC_000014.9 velvet.39648 99.71 True fake: scaffold gap size wrong estimation (local) 83246211 83259725 477337 463581 NC_000014.9 velvet.39648 99.61 True relocation, scaffold gap is present, inconsistency = 17343855 65900789 65902345 477348 478904 NC_000014.9 velvet.39648 99.94 True fake: not a misassembly (possible transposable element) 65902585 65903937 481609 480257 NC_000014.9 velvet.39648 100.0 True fake: not a misassembly (possible transposable element) 65904214 65904904 481788 482478 NC_000014.9 velvet.39648 99.86 True local misassembly 65905043 65906013 482479 483449 NC_000014.9 velvet.39648 98.87 True relocation, scaffold gap is present, inconsistency = 17329488 83236713 83237295 485243 484661 NC_000014.9 velvet.39648 99.83 True fake: scaffold gap size wrong estimation (local) 83234905 83236428 486895 485372 NC_000014.9 velvet.39648 99.74 True fake: scaffold gap size wrong estimation (local) 83229470 83234755 492999 487713 NC_000014.9 velvet.39648 99.83 True fake: not a misassembly (possible transposable element) 44625678 44632126 499458 493010 NC_000014.9 velvet.39648 100.0 True fake: not a misassembly (possible transposable element) 83199848 83201172 521632 520308 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 83195679 83199603 526659 522735 NC_000014.9 velvet.39648 99.95 True fake: scaffold gap size wrong estimation (local) 83193539 83195408 529513 527644 NC_000014.9 velvet.39648 99.95 True relocation, scaffold gap is present, inconsistency = -21633 83207962 83215161 536794 529524 NC_000014.9 velvet.39648 98.34 True relocation, scaffold gap is present, inconsistency = 27226492 55976290 55981459 536805 542022 NC_000014.9 velvet.39648 100.0 True relocation, scaffold gap is present, inconsistency = 27228032 83237534 83245849 578301 570065 NC_000014.9 velvet.39648 98.88 True relocation, scaffold gap is present, inconsistency = 17336787 65898449 65900736 580599 578312 NC_000014.9 velvet.39648 100.0 True fake: not a misassembly (possible transposable element) 83226683 83229170 598769 596281 NC_000014.9 velvet.39648 99.88 True fake: not a misassembly (possible transposable element) 65866185 65873528 608364 600665 NC_000014.9 velvet.39648 99.75 True fake: scaffold gap size wrong estimation (local) 65861872 65865911 613458 609408 NC_000014.9 velvet.39648 99.73 True relocation, scaffold gap is present, inconsistency = -17364587 83222754 83226448 617162 613469 NC_000014.9 velvet.39648 99.76 True fake: scaffold gap size wrong estimation (local) 83221563 83222470 618906 617999 NC_000014.9 velvet.39648 99.67 True fake: scaffold gap size wrong estimation (local) 83215164 83220850 626000 620138 NC_000014.9 velvet.39648 99.87 True relocation, scaffold gap is present, inconsistency = 31606993 51603948 51605131 630223 629040 NC_000014.9 velvet.39648 100.0 True relocation, scaffold gap is present, inconsistency = 12319308 39281895 39284629 632967 630234 NC_000014.9 velvet.39648 99.89 True fake: scaffold gap size wrong estimation (local) 39259014 39259540 656037 655511 NC_000014.9 velvet.39648 99.62 True relocation, scaffold gap is present, inconsistency = -26589134 65845969 65848035 658216 656150 NC_000014.9 velvet.39648 99.95 True fake: scaffold gap size wrong estimation (local) 65832278 65845731 672907 659227 NC_000014.9 velvet.39648 99.93 True fake: scaffold gap size wrong estimation (local) 65830518 65831983 675227 673762 NC_000014.9 velvet.39648 99.93 True fake: scaffold gap size wrong estimation (local) 65819260 65830289 687140 676115 NC_000014.9 velvet.39648 99.89 True fake: scaffold gap size wrong estimation (local) 65813246 65817535 693899 689611 NC_000014.9 velvet.39648 99.79 True fake: scaffold gap size wrong estimation (local) 65797684 65812178 711155 696136 NC_000014.9 velvet.39648 99.73 True fake: scaffold gap size wrong estimation (local) 65795476 65797396 714636 712134 NC_000014.9 velvet.39648 96.77 True fake: scaffold gap size wrong estimation (local) 65793148 65795378 717154 714889 NC_000014.9 velvet.39648 99.86 True fake: scaffold gap size wrong estimation (local) 65791616 65792861 719579 718334 NC_000014.9 velvet.39648 99.28 True fake: scaffold gap size wrong estimation (local) 65778348 65788112 730545 720781 NC_000014.9 velvet.39648 99.93 True fake: not a misassembly (possible transposable element) 66278993 66283054 741971 746085 NC_000014.9 velvet.39648 100.0 True fake: not a misassembly (possible transposable element) 65747723 65758568 757020 746096 NC_000014.9 velvet.39648 99.99 True relocation, scaffold gap is present, inconsistency = -44308 65788768 65791591 760422 757460 NC_000014.9 velvet.39648 99.61 True fake: scaffold gap size wrong estimation (local) 65777362 65778296 767483 766549 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 65775088 65777097 770517 768508 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 65771816 65774707 774520 771630 NC_000014.9 velvet.39648 99.93 True fake: scaffold gap size wrong estimation (local) 65769819 65771653 777318 775483 NC_000014.9 velvet.39648 99.95 True fake: scaffold gap size wrong estimation (local) 65768966 65769564 778344 777746 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 65763211 65768295 784836 779752 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 65760960 65762942 788040 785933 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 65758613 65759871 790015 788704 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 65741553 65747720 804374 798207 NC_000014.9 velvet.39648 99.92 True fake: scaffold gap size wrong estimation (local) 65731725 65740501 814870 806094 NC_000014.9 velvet.39648 99.97 True indel: indel (> 5bp) 65730639 65731724 815977 814892 NC_000014.9 velvet.39648 99.08 True local misassembly 65723326 65726583 819235 815978 NC_000014.9 velvet.39648 100.0 True relocation, scaffold gap is present, inconsistency = 26566022 39156026 39156880 820513 819659 NC_000014.9 velvet.39648 99.88 True fake: scaffold gap size wrong estimation (local) 39153970 39154535 823702 823137 NC_000014.9 velvet.39648 100.0 True fake: not a misassembly (possible transposable element) 65722387 65723137 825447 824697 NC_000014.9 velvet.39648 100.0 True fake: not a misassembly (possible transposable element) 39151392 39152909 827357 825840 NC_000014.9 velvet.39648 99.74 True fake: not a misassembly (possible transposable element) 65718224 65722309 831459 827374 NC_000014.9 velvet.39648 100.0 True fake: not a misassembly (possible transposable element) 39147592 39150363 834739 831470 NC_000014.9 velvet.39648 99.96 True fake: scaffold gap size wrong estimation (local) 39145077 39146012 838012 837049 NC_000014.9 velvet.39648 96.89 True fake: scaffold gap size wrong estimation (local) 39138222 39139127 846667 845762 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 39137256 39137955 848840 848141 NC_000014.9 velvet.39648 98.57 True local misassembly 39136058 39136969 849752 848841 NC_000014.9 velvet.39648 98.79 True fake: scaffold gap size wrong estimation (local) 39134371 39135305 852505 851571 NC_000014.9 velvet.39648 99.79 True fake: scaffold gap size wrong estimation (extensive) 39123876 39124498 854543 853921 NC_000014.9 velvet.39648 99.68 True relocation, scaffold gap is present, inconsistency = -26590534 65702997 65712506 865891 856447 NC_000014.9 velvet.39648 99.32 True fake: scaffold gap size wrong estimation (local) 65700672 65702059 869010 867623 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 65697975 65700370 872450 870013 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 65695017 65697679 876130 873468 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 65693513 65694515 878516 877514 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 65690992 65691615 881842 881219 NC_000014.9 velvet.39648 98.4 True local misassembly 65689810 65690710 882743 881843 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 65688524 65689523 885016 884017 NC_000014.9 velvet.39648 100.0 True relocation, scaffold gap is present, inconsistency = 1878720 63805675 63806379 888441 889145 NC_000014.9 velvet.39648 99.57 True fake: not a misassembly (possible transposable element) 74301869 74303316 890127 891574 NC_000014.9 velvet.39648 100.0 True fake: not a misassembly (possible transposable element) 63809016 63809734 895440 896148 NC_000014.9 velvet.39648 97.6 True relocation, scaffold gap is present, inconsistency = 10494756 74304501 74305076 896159 896734 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 74310850 74311430 903770 904350 NC_000014.9 velvet.39648 100.0 True relocation, scaffold gap is present, inconsistency = -46265 74265176 74266522 904361 905707 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 74268485 74270008 908401 909901 NC_000014.9 velvet.39648 95.24 True relocation, scaffold gap is present, inconsistency = 8552577 65714928 65715850 910881 909959 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 65714095 65714750 911960 911313 NC_000014.9 velvet.39648 98.48 True relocation, scaffold gap is present, inconsistency = 8556492 74271413 74272152 912131 912870 NC_000014.9 velvet.39648 100.0 True local misassembly 74267479 74268409 912881 913811 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 74273340 74273991 914729 915380 NC_000014.9 velvet.39648 99.85 True fake: scaffold gap size wrong estimation (local) 74274834 74275848 916564 917578 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 74280677 74281805 917589 918717 NC_000014.9 velvet.39648 100.0 True relocation, scaffold gap is present, inconsistency = 10434991 63839303 63839983 925100 924420 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 63835984 63837791 929095 927267 NC_000014.9 velvet.39648 98.69 True fake: scaffold gap size wrong estimation (local) 63832867 63833872 933006 932001 NC_000014.9 velvet.39648 99.8 True fake: scaffold gap size wrong estimation (local) 63831806 63832319 936483 935970 NC_000014.9 velvet.39648 97.86 True relocation, scaffold gap is present, inconsistency = 10575 63819832 63820364 937350 937882 NC_000014.9 velvet.39648 99.81 True fake: scaffold gap size wrong estimation (local) 63822149 63822908 940614 941373 NC_000014.9 velvet.39648 99.87 True fake: scaffold gap size wrong estimation (local) 63825093 63825622 945200 945729 NC_000014.9 velvet.39648 99.81 True fake: scaffold gap size wrong estimation (local) 63828780 63829829 949193 950242 NC_000014.9 velvet.39648 99.9 True relocation, scaffold gap is present, inconsistency = 10487089 74316929 74317565 950253 950889 NC_000014.9 velvet.39648 100.0 True local misassembly 74315314 74316281 950900 951867 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 74320936 74321517 958088 958669 NC_000014.9 velvet.39648 100.0 True relocation, scaffold gap is present, inconsistency = -10483764 63841048 63841837 961964 962753 NC_000014.9 velvet.39648 99.75 True fake: scaffold gap size wrong estimation (local) 63842755 63844791 964495 966531 NC_000014.9 velvet.39648 99.85 True fake: scaffold gap size wrong estimation (local) 63846833 63847601 968679 969539 NC_000014.9 velvet.39648 96.17 True fake: scaffold gap size wrong estimation (local) 63848135 63850094 970572 972585 NC_000014.9 velvet.39648 99.95 True fake: scaffold gap size wrong estimation (local) 63850369 63851109 973144 973883 NC_000014.9 velvet.39648 99.73 True fake: scaffold gap size wrong estimation (local) 63852129 63858132 975708 981816 NC_000014.9 velvet.39648 99.02 True fake: scaffold gap size wrong estimation (local) 63858556 63859564 982749 983757 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 63868489 63869374 987614 988499 NC_000014.9 velvet.39648 99.89 True local misassembly 63869653 63871221 988500 990068 NC_000014.9 velvet.39648 99.11 True fake: scaffold gap size wrong estimation (local) 63872790 63873306 992637 993153 NC_000014.9 velvet.39648 99.81 True fake: scaffold gap size wrong estimation (local) 63873682 63875168 993223 994709 NC_000014.9 velvet.39648 99.06 True fake: scaffold gap size wrong estimation (local) 63875169 63876167 996033 997031 NC_000014.9 velvet.39648 97.0 True fake: scaffold gap size wrong estimation (local) 63876788 63877887 997522 998621 NC_000014.9 velvet.39648 99.91 True fake: scaffold gap size wrong estimation (local) 63878837 63880134 1000524 1001821 NC_000014.9 velvet.39648 100.0 True fake: scaffold gap size wrong estimation (local) 63888053 63888957 1003168 1004072 NC_000014.9 velvet.39648 99.78 True relocation, scaffold gap is present, inconsistency = -9437 63881229 63882471 1005781 1007023 NC_000014.9 velvet.39648 99.84 True fake: scaffold gap size wrong estimation (extensive) 63890357 63892791 1007555 1009986 NC_000014.9 velvet.39648 99.84 True relocation, scaffold gap is present, inconsistency = -10568 63883892 63884840 1011655 1012603 NC_000014.9 velvet.39648 99.89 True fake: scaffold gap size wrong estimation (local) 63884941 63886703 1013172 1014993 NC_000014.9 velvet.39648 96.65 True fake: scaffold gap size wrong estimation (extensive) 63895809 63897004 1015004 1016199 NC_000014.9 velvet.39648 100.0 True CONTIG velvet.39648 1016303 misassembled 60434954 60439829 1 4876 NC_000014.9 velvet.39692 100.0 True fake: scaffold gap size wrong estimation (local) 60440085 60443663 5894 9494 NC_000014.9 velvet.39692 98.95 True CONTIG velvet.39692 12105 correct CONTIG velvet.39805 414 unaligned CONTIG velvet.39813 233 unaligned 60146479 60147034 1 558 NC_000014.9 velvet.39833 99.64 True CONTIG velvet.39833 558 correct CONTIG velvet.39865 309 unaligned 34968951 34970019 2977 4045 NC_000014.9 velvet.39866 100.0 True CONTIG velvet.39866 4045 correct CONTIG velvet.39878 281 unaligned CONTIG velvet.39887 379 unaligned 71925713 71926331 619 1 NC_000014.9 velvet.39917 100.0 True fake: scaffold gap size wrong estimation (local) 71920636 71922847 2841 630 NC_000014.9 velvet.39917 99.68 True relocation, scaffold gap is present, inconsistency = -31495 71922866 71923443 32106 31529 NC_000014.9 velvet.39917 100.0 True fake: scaffold gap size wrong estimation (local) 71919990 71920622 35630 34998 NC_000014.9 velvet.39917 100.0 True fake: scaffold gap size wrong estimation (local) 71888659 71891661 66062 63060 NC_000014.9 velvet.39917 99.63 True CONTIG velvet.39917 66062 misassembled 75358864 75359868 1 1005 NC_000014.9 velvet.39934 99.9 True local misassembly 75360130 75361053 1006 1929 NC_000014.9 velvet.39934 98.92 True fake: scaffold gap size wrong estimation (local) 75361191 75362518 3175 4502 NC_000014.9 velvet.39934 99.85 True fake: scaffold gap size wrong estimation (local) 75362797 75366491 5322 9028 NC_000014.9 velvet.39934 99.6 True relocation, scaffold gap is present, inconsistency = -700071 74690287 74691156 32895 33764 NC_000014.9 velvet.39934 99.89 True fake: scaffold gap size wrong estimation (local) 74691292 74692724 35005 36437 NC_000014.9 velvet.39934 95.67 True fake: scaffold gap size wrong estimation (local) 74692997 74693933 36537 37473 NC_000014.9 velvet.39934 100.0 True CONTIG velvet.39934 37473 misassembled 94965370 94969128 3784 1 NC_000014.9 velvet.40025 99.49 True CONTIG velvet.40025 19511 correct CONTIG velvet.40031 295 unaligned CONTIG velvet.40047 210 unaligned CONTIG velvet.40087 307 unaligned CONTIG velvet.40094 275 unaligned CONTIG velvet.40132 253 unaligned CONTIG velvet.40173 283 unaligned 48562010 48562560 3283 3833 NC_000014.9 velvet.40177 100.0 True CONTIG velvet.40177 3833 correct 92807352 92807983 523 1154 NC_000014.9 velvet.40182 99.84 True CONTIG velvet.40182 1649 correct CONTIG velvet.40195 7548 unaligned 59118483 59120022 1 1541 NC_000014.9 velvet.40199 99.87 True CONTIG velvet.40199 1541 correct CONTIG velvet.40223 469 unaligned CONTIG velvet.40232 223 unaligned CONTIG velvet.40235 234 unaligned CONTIG velvet.40251 278 unaligned CONTIG velvet.40259 3638 unaligned CONTIG velvet.40274 368 unaligned 22806369 22806914 1 546 NC_000014.9 velvet.40292 100.0 True CONTIG velvet.40292 546 correct CONTIG velvet.40293 258 unaligned 48136033 48139770 1149 4894 NC_000014.9 velvet.40364 99.92 True CONTIG velvet.40364 4894 correct CONTIG velvet.40424 328 unaligned CONTIG velvet.40429 321 unaligned CONTIG velvet.40438 507 unaligned CONTIG velvet.40473 238 unaligned CONTIG velvet.40486 261 unaligned CONTIG velvet.40533 386 unaligned CONTIG velvet.40562 549 unaligned CONTIG velvet.40593 219 unaligned CONTIG velvet.40680 218 unaligned 34346546 34347972 1592 166 NC_000014.9 velvet.40716 99.23 True relocation, scaffold gap is present, inconsistency = -44715 34358952 34362335 33902 30518 NC_000014.9 velvet.40716 99.85 True fake: scaffold gap size wrong estimation (local) 34354764 34357449 39434 36749 NC_000014.9 velvet.40716 98.25 True fake: scaffold gap size wrong estimation (local) 34353231 34354127 40678 39782 NC_000014.9 velvet.40716 100.0 True fake: scaffold gap size wrong estimation (local) 34350927 34353137 43668 41436 NC_000014.9 velvet.40716 99.19 True fake: scaffold gap size wrong estimation (local) 34322677 34323848 67651 66480 NC_000014.9 velvet.40716 97.61 True local misassembly 34321919 34322538 68271 67652 NC_000014.9 velvet.40716 100.0 True fake: scaffold gap size wrong estimation (local) 34317540 34321703 73551 69388 NC_000014.9 velvet.40716 99.86 True fake: scaffold gap size wrong estimation (local) 34316070 34316932 76744 75882 NC_000014.9 velvet.40716 100.0 True fake: scaffold gap size wrong estimation (local) 34315312 34315965 77798 77145 NC_000014.9 velvet.40716 99.69 True fake: scaffold gap size wrong estimation (local) 34312807 34315027 80718 78498 NC_000014.9 velvet.40716 99.55 True fake: scaffold gap size wrong estimation (local) 34308431 34312589 86100 81721 NC_000014.9 velvet.40716 99.98 True fake: scaffold gap size wrong estimation (local) 34306723 34307800 88757 87569 NC_000014.9 velvet.40716 99.91 True relocation, scaffold gap is present, inconsistency = 37208562 71516958 71518196 89353 90591 NC_000014.9 velvet.40716 99.92 True fake: scaffold gap size wrong estimation (local) 71522964 71525028 90602 92696 NC_000014.9 velvet.40716 98.57 True fake: scaffold gap size wrong estimation (local) 71529144 71533994 92707 97628 NC_000014.9 velvet.40716 99.83 True fake: scaffold gap size wrong estimation (local) 71534101 71535611 98305 99815 NC_000014.9 velvet.40716 99.8 True fake: scaffold gap size wrong estimation (local) 71535809 71537246 100456 101944 NC_000014.9 velvet.40716 100.0 True fake: not a misassembly (possible transposable element) 50159202 50160117 101955 102870 NC_000014.9 velvet.40716 100.0 True fake: not a misassembly (possible transposable element) 71537729 71540439 103630 106240 NC_000014.9 velvet.40716 96.31 True relocation, scaffold gap is present, inconsistency = -27834 71512616 71513124 106251 106759 NC_000014.9 velvet.40716 99.61 True fake: scaffold gap size wrong estimation (local) 71541539 71542269 138601 139331 NC_000014.9 velvet.40716 95.21 True fake: scaffold gap size wrong estimation (local) 71542765 71543714 140641 141590 NC_000014.9 velvet.40716 99.68 True fake: scaffold gap size wrong estimation (local) 71544279 71544943 141624 142288 NC_000014.9 velvet.40716 100.0 True indel: indel (> 5bp) 71545081 71545601 142449 142969 NC_000014.9 velvet.40716 99.62 True fake: scaffold gap size wrong estimation (local) 71548745 71550023 148383 149686 NC_000014.9 velvet.40716 99.05 True local misassembly 71547595 71548651 149697 150753 NC_000014.9 velvet.40716 100.0 True fake: scaffold gap size wrong estimation (local) 71555446 71559079 153889 157520 NC_000014.9 velvet.40716 99.83 True fake: scaffold gap size wrong estimation (local) 71559346 71561644 158626 160912 NC_000014.9 velvet.40716 99.48 True fake: scaffold gap size wrong estimation (local) 71561886 71562768 162165 163047 NC_000014.9 velvet.40716 100.0 True local misassembly 71562928 71564191 163048 164311 NC_000014.9 velvet.40716 99.13 True CONTIG velvet.40716 164723 misassembled 53838386 53842389 1 4058 NC_000014.9 velvet.40720 99.62 True CONTIG velvet.40720 4058 correct CONTIG velvet.40725 210 unaligned CONTIG velvet.40755 36683 unaligned 56861265 56862340 1 1069 NC_000014.9 velvet.40782 99.26 True fake: scaffold gap size wrong estimation (local) 56862802 56864883 2907 4923 NC_000014.9 velvet.40782 96.81 True fake: scaffold gap size wrong estimation (local) 56891143 56895800 31857 36572 NC_000014.9 velvet.40782 99.96 True fake: scaffold gap size wrong estimation (local) 56896840 56897498 38110 38768 NC_000014.9 velvet.40782 99.85 True relocation, scaffold gap is present, inconsistency = 22463154 34431744 34433675 40852 38779 NC_000014.9 velvet.40782 98.7 True fake: scaffold gap size wrong estimation (local) 34428918 34431428 44220 41710 NC_000014.9 velvet.40782 99.96 True fake: scaffold gap size wrong estimation (local) 34425958 34427231 48006 46733 NC_000014.9 velvet.40782 100.0 True CONTIG velvet.40782 48006 misassembled 32511657 32515073 92 3508 NC_000014.9 velvet.40808 99.91 True fake: scaffold gap size wrong estimation (local) 32515341 32517646 4554 6896 NC_000014.9 velvet.40808 98.38 True fake: scaffold gap size wrong estimation (local) 32540398 32543284 28083 30966 NC_000014.9 velvet.40808 99.76 True fake: scaffold gap size wrong estimation (local) 32567221 32570147 52927 55853 NC_000014.9 velvet.40808 99.9 True relocation, scaffold gap is present, inconsistency = 27085 32534992 32540125 60997 55864 NC_000014.9 velvet.40808 99.98 True relocation, scaffold gap is present, inconsistency = -18158 32551938 32553139 62209 61008 NC_000014.9 velvet.40808 100.0 True fake: scaffold gap size wrong estimation (local) 32548366 32551289 66384 63485 NC_000014.9 velvet.40808 99.15 True relocation, scaffold gap is present, inconsistency = -11423 32557087 32559778 69086 66395 NC_000014.9 velvet.40808 99.15 True fake: scaffold gap size wrong estimation (local) 32556583 32557086 69636 69133 NC_000014.9 velvet.40808 97.82 True local misassembly 32553447 32555775 71965 69637 NC_000014.9 velvet.40808 99.96 True fake: scaffold gap size wrong estimation (local) 32543357 32547706 76734 72385 NC_000014.9 velvet.40808 99.98 True relocation, scaffold gap is present, inconsistency = 12545 32506605 32508843 98703 101063 NC_000014.9 velvet.40808 99.91 True relocation, scaffold gap is present, inconsistency = 11585 32523673 32526327 104308 106961 NC_000014.9 velvet.40808 99.74 True fake: scaffold gap size wrong estimation (local) 32527422 32528738 107886 109202 NC_000014.9 velvet.40808 100.0 True local misassembly 32526434 32527371 109213 110150 NC_000014.9 velvet.40808 99.89 True fake: not a misassembly (possible transposable element) 32530886 32534683 114235 110438 NC_000014.9 velvet.40808 99.92 True fake: not a misassembly (possible transposable element) 32528973 32529985 114246 115258 NC_000014.9 velvet.40808 100.0 True fake: scaffold gap size wrong estimation (local) 32530327 32530910 116142 116725 NC_000014.9 velvet.40808 99.83 True relocation, scaffold gap is present, inconsistency = 12476 32509353 32510335 125223 124241 NC_000014.9 velvet.40808 99.9 True local misassembly 32510477 32511358 126485 125604 NC_000014.9 velvet.40808 100.0 True relocation, scaffold gap is present, inconsistency = 17268 32489478 32493198 131223 126496 NC_000014.9 velvet.40808 99.78 True fake: scaffold gap size wrong estimation (local) 32484048 32485141 137921 136828 NC_000014.9 velvet.40808 100.0 True fake: scaffold gap size wrong estimation (local) 32482992 32483500 139152 138644 NC_000014.9 velvet.40808 100.0 True fake: scaffold gap size wrong estimation (local) 32479854 32482957 142982 139889 NC_000014.9 velvet.40808 99.55 True relocation, scaffold gap is present, inconsistency = -26731 32504492 32506574 144983 142993 NC_000014.9 velvet.40808 95.47 True fake: scaffold gap size wrong estimation (local) 32493231 32504357 157023 145890 NC_000014.9 velvet.40808 99.82 True relocation, scaffold gap is present, inconsistency = 66075 32570443 32571226 157034 157817 NC_000014.9 velvet.40808 99.87 True relocation, scaffold gap is present, inconsistency = -11388 32559849 32562503 157828 160482 NC_000014.9 velvet.40808 100.0 True fake: scaffold gap size wrong estimation (local) 32562749 32566969 161545 165765 NC_000014.9 velvet.40808 100.0 True fake: scaffold gap size wrong estimation (extensive) 32576335 32580579 165776 170020 NC_000014.9 velvet.40808 100.0 True relocation, scaffold gap is present, inconsistency = -18307 32571460 32576303 179208 184051 NC_000014.9 velvet.40808 99.92 True relocation, scaffold gap is present, inconsistency = 10383 32587255 32602282 184620 199870 NC_000014.9 velvet.40808 99.79 True fake: scaffold gap size wrong estimation (local) 32608977 32609877 199881 200781 NC_000014.9 velvet.40808 100.0 True relocation, scaffold gap is present, inconsistency = 129208 32475956 32479758 204668 200792 NC_000014.9 velvet.40808 99.81 True fake: scaffold gap size wrong estimation (local) 32474164 32475664 207067 205567 NC_000014.9 velvet.40808 99.87 True fake: scaffold gap size wrong estimation (local) 32472896 32473928 208808 207776 NC_000014.9 velvet.40808 99.81 True fake: scaffold gap size wrong estimation (local) 32450737 32452010 228483 227210 NC_000014.9 velvet.40808 99.06 True fake: scaffold gap size wrong estimation (local) 32449527 32450306 230380 229601 NC_000014.9 velvet.40808 99.87 True relocation, scaffold gap is present, inconsistency = -13583 32459743 32461903 233743 231587 NC_000014.9 velvet.40808 99.44 True fake: scaffold gap size wrong estimation (local) 32455239 32459619 239054 234675 NC_000014.9 velvet.40808 99.86 True fake: scaffold gap size wrong estimation (local) 32453861 32454618 241295 240538 NC_000014.9 velvet.40808 100.0 True fake: scaffold gap size wrong estimation (local) 32452595 32453562 242417 241450 NC_000014.9 velvet.40808 99.9 True fake: scaffold gap size wrong estimation (local) 32436795 32437608 262775 261962 NC_000014.9 velvet.40808 99.88 True local misassembly 32440478 32442543 264867 262786 NC_000014.9 velvet.40808 98.18 True fake: scaffold gap size wrong estimation (local) 32437849 32440100 268334 266083 NC_000014.9 velvet.40808 99.64 True fake: scaffold gap size wrong estimation (extensive) 32426010 32430822 273157 268345 NC_000014.9 velvet.40808 99.81 True fake: scaffold gap size wrong estimation (local) 32423235 32424500 276781 275541 NC_000014.9 velvet.40808 97.77 True relocation, scaffold gap is present, inconsistency = 204979 32629490 32634888 276792 282233 NC_000014.9 velvet.40808 99.89 True fake: scaffold gap size wrong estimation (local) 32641511 32643325 283448 285262 NC_000014.9 velvet.40808 99.89 True fake: scaffold gap size wrong estimation (local) 32643609 32649559 286275 292998 NC_000014.9 velvet.40808 99.98 True fake: scaffold gap size wrong estimation (local) 32649591 32650361 293894 294664 NC_000014.9 velvet.40808 100.0 True local misassembly 32650574 32651473 294665 295564 NC_000014.9 velvet.40808 98.89 True fake: not a misassembly (possible transposable element) 34959161 34960559 299746 298348 NC_000014.9 velvet.40808 100.0 True fake: not a misassembly (possible transposable element) 32651475 32652823 299758 301106 NC_000014.9 velvet.40808 99.93 True fake: scaffold gap size wrong estimation (local) 32653665 32654650 302441 303426 NC_000014.9 velvet.40808 99.9 True fake: scaffold gap size wrong estimation (local) 32654886 32669692 304317 319123 NC_000014.9 velvet.40808 99.95 True fake: not a misassembly (possible transposable element) 25477268 25480674 322926 319134 NC_000014.9 velvet.40808 99.94 True fake: not a misassembly (possible transposable element) 32670197 32673481 323326 327454 NC_000014.9 velvet.40808 96.47 True fake: scaffold gap size wrong estimation (local) 32673751 32676952 328353 331554 NC_000014.9 velvet.40808 100.0 True fake: scaffold gap size wrong estimation (local) 32677110 32681696 332468 337054 NC_000014.9 velvet.40808 99.98 True fake: scaffold gap size wrong estimation (local) 32681820 32683048 337731 338959 NC_000014.9 velvet.40808 99.92 True relocation, scaffold gap is present, inconsistency = 7207953 25469905 25473856 342992 338970 NC_000014.9 velvet.40808 99.77 True relocation, scaffold gap is present, inconsistency = 203406 25678752 25679500 344482 345230 NC_000014.9 velvet.40808 98.66 True fake: not a misassembly (possible transposable element) 25643081 25644135 347217 346163 NC_000014.9 velvet.40808 100.0 True fake: not a misassembly (possible transposable element) 25681014 25682146 347486 348618 NC_000014.9 velvet.40808 98.76 True indel: indel (<= 5bp) 25682147 25683208 348621 349682 NC_000014.9 velvet.40808 99.91 True relocation, scaffold gap is present, inconsistency = 216338 25459599 25465798 356660 349693 NC_000014.9 velvet.40808 99.82 True fake: scaffold gap size wrong estimation (local) 25458172 25459420 358741 357493 NC_000014.9 velvet.40808 99.92 True relocation, scaffold gap is present, inconsistency = 12029507 37491510 37495103 361324 364917 NC_000014.9 velvet.40808 99.92 True relocation, scaffold gap is present, inconsistency = -11897302 25597812 25606322 364928 373438 NC_000014.9 velvet.40808 99.93 True fake: scaffold gap size wrong estimation (local) 25606615 25612869 374499 381507 NC_000014.9 velvet.40808 99.71 True fake: scaffold gap size wrong estimation (local) 25612979 25613775 382243 383076 NC_000014.9 velvet.40808 95.32 True relocation, scaffold gap is present, inconsistency = 124929 25480823 25487273 390492 383853 NC_000014.9 velvet.40808 99.89 True fake: not a misassembly (possible transposable element) 25566371 25568709 393079 395474 NC_000014.9 velvet.40808 99.74 True fake: not a misassembly (possible transposable element) 25474931 25477206 398623 396344 NC_000014.9 velvet.40808 99.65 True fake: scaffold gap size wrong estimation (local) 25468650 25469863 402998 401785 NC_000014.9 velvet.40808 99.92 True fake: scaffold gap size wrong estimation (local) 25465825 25468564 405986 403247 NC_000014.9 velvet.40808 99.82 True fake: scaffold gap size wrong estimation (local) 25455960 25458160 413304 411104 NC_000014.9 velvet.40808 99.91 True fake: scaffold gap size wrong estimation (local) 25449886 25455853 420063 414060 NC_000014.9 velvet.40808 99.88 True fake: scaffold gap size wrong estimation (local) 25448675 25449778 421755 420636 NC_000014.9 velvet.40808 97.32 True fake: scaffold gap size wrong estimation (local) 25434643 25448484 437185 422442 NC_000014.9 velvet.40808 98.27 True fake: scaffold gap size wrong estimation (local) 25424812 25425578 440097 439332 NC_000014.9 velvet.40808 99.35 True relocation, scaffold gap is present, inconsistency = 64389 25359049 25360412 440108 441471 NC_000014.9 velvet.40808 99.93 True fake: scaffold gap size wrong estimation (local) 25361616 25364797 443449 446630 NC_000014.9 velvet.40808 100.0 True relocation, scaffold gap is present, inconsistency = 51839 25422118 25422782 452776 452112 NC_000014.9 velvet.40808 100.0 True indel: indel (> 5bp) 25417979 25422091 457554 452874 NC_000014.9 velvet.40808 99.61 True relocation, scaffold gap is present, inconsistency = -12316 25428157 25428793 459691 459056 NC_000014.9 velvet.40808 98.43 True relocation, scaffold gap is present, inconsistency = 54942 25370681 25373204 459702 462225 NC_000014.9 velvet.40808 99.92 True fake: scaffold gap size wrong estimation (local) 25373315 25391176 463117 481878 NC_000014.9 velvet.40808 99.92 True fake: scaffold gap size wrong estimation (local) 25391447 25393203 482804 484517 NC_000014.9 velvet.40808 96.96 True fake: scaffold gap size wrong estimation (local) 25393479 25397854 485532 489907 NC_000014.9 velvet.40808 100.0 True fake: scaffold gap size wrong estimation (local) 25398121 25404698 490946 497989 NC_000014.9 velvet.40808 99.88 True fake: scaffold gap size wrong estimation (local) 25405423 25408248 499102 502634 NC_000014.9 velvet.40808 99.89 True fake: scaffold gap size wrong estimation (local) 25408584 25409885 503025 504326 NC_000014.9 velvet.40808 99.85 True fake: scaffold gap size wrong estimation (local) 25410227 25417301 505447 512522 NC_000014.9 velvet.40808 99.8 True relocation, scaffold gap is present, inconsistency = 10169 25430099 25432275 515151 517291 NC_000014.9 velvet.40808 98.11 True relocation, scaffold gap is present, inconsistency = 70740 25348136 25359012 529393 517638 NC_000014.9 velvet.40808 99.63 True fake: scaffold gap size wrong estimation (local) 25336144 25336983 543766 542927 NC_000014.9 velvet.40808 99.88 True relocation, scaffold gap is present, inconsistency = -11981 25346690 25348114 545201 543777 NC_000014.9 velvet.40808 100.0 True fake: scaffold gap size wrong estimation (local) 25344669 25346354 547782 546097 NC_000014.9 velvet.40808 99.88 True fake: scaffold gap size wrong estimation (local) 25342318 25343403 550856 549771 NC_000014.9 velvet.40808 99.91 True fake: scaffold gap size wrong estimation (local) 25340580 25342040 553123 551669 NC_000014.9 velvet.40808 99.32 True fake: scaffold gap size wrong estimation (local) 25316239 25324074 575722 567906 NC_000014.9 velvet.40808 99.27 True relocation, scaffold gap is present, inconsistency = -17409 25329649 25333637 579721 575733 NC_000014.9 velvet.40808 99.9 True fake: scaffold gap size wrong estimation (local) 25324901 25326915 584864 582850 NC_000014.9 velvet.40808 99.85 True relocation, scaffold gap is present, inconsistency = 35148403 60475329 60477933 584875 587479 NC_000014.9 velvet.40808 99.69 True relocation, scaffold gap is present, inconsistency = -17975067 42502877 42507206 587490 591818 NC_000014.9 velvet.40808 99.93 True fake: not a misassembly (possible transposable element) 34741775 34743406 592911 594482 NC_000014.9 velvet.40808 96.12 True fake: not a misassembly (possible transposable element) 42524908 42531805 607816 615496 NC_000014.9 velvet.40808 99.91 True fake: scaffold gap size wrong estimation (local) 42532142 42534353 616601 618773 NC_000014.9 velvet.40808 95.84 True fake: scaffold gap size wrong estimation (local) 42534654 42550968 619536 637277 NC_000014.9 velvet.40808 99.83 True fake: scaffold gap size wrong estimation (local) 42551248 42554822 638388 641962 NC_000014.9 velvet.40808 99.86 True relocation, scaffold gap is present, inconsistency = -12308657 30257288 30269420 653085 665207 NC_000014.9 velvet.40808 99.88 True relocation, scaffold gap is present, inconsistency = 48952881 79222312 79226799 669702 665218 NC_000014.9 velvet.40808 99.84 True relocation, scaffold gap is present, inconsistency = 36655569 42563076 42566732 669713 673369 NC_000014.9 velvet.40808 99.89 True relocation, scaffold gap is present, inconsistency = 5235667 37323432 37327398 677346 673380 NC_000014.9 velvet.40808 99.77 True fake: not a misassembly (possible transposable element) 30276533 30278491 677357 679316 NC_000014.9 velvet.40808 99.9 True fake: not a misassembly (possible transposable element) 37319109 37322612 682830 679327 NC_000014.9 velvet.40808 99.83 True fake: not a misassembly (possible transposable element) 30279207 30282180 683169 686142 NC_000014.9 velvet.40808 99.83 True fake: not a misassembly (possible transposable element) 37316974 37318791 688651 686835 NC_000014.9 velvet.40808 99.5 True relocation, scaffold gap is present, inconsistency = 7019461 30295581 30297502 688662 690583 NC_000014.9 velvet.40808 99.95 True relocation, scaffold gap is present, inconsistency = 6997308 37312371 37316010 712443 708144 NC_000014.9 velvet.40808 99.86 True fake: scaffold gap size wrong estimation (local) 37309960 37312134 714996 712814 NC_000014.9 velvet.40808 99.45 True fake: scaffold gap size wrong estimation (local) 37302637 37309097 723195 716735 NC_000014.9 velvet.40808 99.89 True fake: scaffold gap size wrong estimation (local) 37288762 37290219 739721 738264 NC_000014.9 velvet.40808 97.12 True fake: scaffold gap size wrong estimation (local) 37287867 37288761 740723 739829 NC_000014.9 velvet.40808 99.89 True indel: indel (> 5bp) 37287342 37287859 741241 740724 NC_000014.9 velvet.40808 97.68 True indel: indel (> 5bp) 37285863 37287338 742790 741315 NC_000014.9 velvet.40808 99.86 True fake: scaffold gap size wrong estimation (local) 37284609 37285577 744674 743706 NC_000014.9 velvet.40808 100.0 True fake: scaffold gap size wrong estimation (local) 37283336 37284369 746062 745045 NC_000014.9 velvet.40808 98.24 True relocation, scaffold gap is present, inconsistency = 8216 37292782 37293369 746259 746846 NC_000014.9 velvet.40808 100.0 True relocation, scaffold gap is present, inconsistency = 13779158 51072689 51074167 747008 748486 NC_000014.9 velvet.40808 99.93 True fake: scaffold gap size wrong estimation (local) 51080485 51083353 750521 753389 NC_000014.9 velvet.40808 99.9 True fake: scaffold gap size wrong estimation (local) 51083522 51090689 754353 761688 NC_000014.9 velvet.40808 99.85 True fake: scaffold gap size wrong estimation (local) 51090771 51097669 762431 769560 NC_000014.9 velvet.40808 99.99 True fake: scaffold gap size wrong estimation (local) 51097938 51099247 770270 771579 NC_000014.9 velvet.40808 99.92 True fake: scaffold gap size wrong estimation (local) 51126934 51127845 795565 796476 NC_000014.9 velvet.40808 97.37 True fake: scaffold gap size wrong estimation (local) 51127995 51128878 796601 797484 NC_000014.9 velvet.40808 100.0 True fake: scaffold gap size wrong estimation (local) 51129160 51132746 798712 802496 NC_000014.9 velvet.40808 99.83 True relocation, scaffold gap is present, inconsistency = 50761478 101896668 101897416 804940 805688 NC_000014.9 velvet.40808 100.0 True fake: scaffold gap size wrong estimation (local) 101898027 101903031 806783 811845 NC_000014.9 velvet.40808 98.81 True relocation, scaffold gap is present, inconsistency = 177393 101719176 101720623 813303 811856 NC_000014.9 velvet.40808 99.93 True relocation, scaffold gap is present, inconsistency = 50594657 51113968 51124508 813314 824250 NC_000014.9 velvet.40808 98.36 True fake: scaffold gap size wrong estimation (local) 51125093 51126063 825658 826627 NC_000014.9 velvet.40808 99.69 True fake: not a misassembly (possible transposable element) 101682427 101683532 850807 849696 NC_000014.9 velvet.40808 99.19 True fake: not a misassembly (possible transposable element) 51150076 51151776 851035 852735 NC_000014.9 velvet.40808 100.0 True relocation, scaffold gap is present, inconsistency = 50522555 101677496 101678577 856981 855900 NC_000014.9 velvet.40808 99.91 True fake: scaffold gap size wrong estimation (extensive) 101676477 101677057 865909 865329 NC_000014.9 velvet.40808 100.0 True fake: scaffold gap size wrong estimation (local) 101673309 101674005 869619 868923 NC_000014.9 velvet.40808 99.86 True fake: scaffold gap size wrong estimation (local) 101669821 101671686 873882 872009 NC_000014.9 velvet.40808 99.52 True relocation, scaffold gap is present, inconsistency = 50494709 51173112 51175101 873893 875882 NC_000014.9 velvet.40808 99.8 True fake: scaffold gap size wrong estimation (local) 51175479 51177833 877074 879428 NC_000014.9 velvet.40808 99.96 True fake: scaffold gap size wrong estimation (local) 51178225 51189290 880699 891900 NC_000014.9 velvet.40808 99.25 True relocation, scaffold gap is present, inconsistency = -35473 51153828 51154593 891911 892677 NC_000014.9 velvet.40808 99.22 True fake: scaffold gap size wrong estimation (local) 51154887 51158848 893872 897828 NC_000014.9 velvet.40808 99.87 True relocation, scaffold gap is present, inconsistency = 13885018 37267444 37269855 900253 897842 NC_000014.9 velvet.40808 99.88 True fake: scaffold gap size wrong estimation (local) 37264431 37267203 904058 901286 NC_000014.9 velvet.40808 99.96 True fake: scaffold gap size wrong estimation (local) 37260241 37264346 908413 904308 NC_000014.9 velvet.40808 99.95 True fake: scaffold gap size wrong estimation (local) 37244546 37260152 925993 908605 NC_000014.9 velvet.40808 99.83 True relocation, scaffold gap is present, inconsistency = 13929310 51189568 51191563 926099 928094 NC_000014.9 velvet.40808 99.9 True fake: scaffold gap size wrong estimation (local) 51191921 51194525 929301 931903 NC_000014.9 velvet.40808 99.92 True relocation, scaffold gap is present, inconsistency = 13956377 37213527 37214922 953920 952525 NC_000014.9 velvet.40808 99.93 True relocation, scaffold gap is present, inconsistency = -7333 37218927 37220817 955798 953963 NC_000014.9 velvet.40808 97.02 True fake: scaffold gap size wrong estimation (local) 37209879 37213110 959138 955907 NC_000014.9 velvet.40808 99.94 True fake: scaffold gap size wrong estimation (local) 37207815 37208643 962813 961985 NC_000014.9 velvet.40808 100.0 True fake: scaffold gap size wrong estimation (local) 37206033 37206833 965845 965049 NC_000014.9 velvet.40808 98.74 True relocation, scaffold gap is present, inconsistency = 13988072 51194916 51197387 965856 968307 NC_000014.9 velvet.40808 99.07 True fake: scaffold gap size wrong estimation (local) 51197694 51199812 969751 971869 NC_000014.9 velvet.40808 99.95 True fake: scaffold gap size wrong estimation (local) 51200011 51200526 973109 973624 NC_000014.9 velvet.40808 100.0 True fake: scaffold gap size wrong estimation (local) 51202537 51205933 976187 979583 NC_000014.9 velvet.40808 99.71 True relocation, scaffold gap is present, inconsistency = -6691875 44515477 44522283 981002 988219 NC_000014.9 velvet.40808 98.73 True fake: scaffold gap size wrong estimation (local) 44522395 44523758 988884 990247 NC_000014.9 velvet.40808 99.93 True fake: scaffold gap size wrong estimation (local) 44523899 44525822 990794 992760 NC_000014.9 velvet.40808 96.88 True fake: scaffold gap size wrong estimation (local) 44526049 44527345 993729 995025 NC_000014.9 velvet.40808 99.77 True fake: scaffold gap size wrong estimation (local) 44527775 44531432 996096 999850 NC_000014.9 velvet.40808 99.94 True fake: scaffold gap size wrong estimation (local) 44557801 44559143 1022989 1024331 NC_000014.9 velvet.40808 99.85 True relocation, scaffold gap is present, inconsistency = 6675707 51234870 51237303 1024351 1026784 NC_000014.9 velvet.40808 99.92 True fake: scaffold gap size wrong estimation (local) 51240100 51241878 1026795 1028573 NC_000014.9 velvet.40808 99.94 True fake: scaffold gap size wrong estimation (local) 51244603 51247281 1031656 1034334 NC_000014.9 velvet.40808 99.93 True relocation, scaffold gap is present, inconsistency = -7830 51239462 51240043 1034345 1034926 NC_000014.9 velvet.40808 99.83 True relocation, scaffold gap is present, inconsistency = -6680608 44559446 44561127 1034937 1036618 NC_000014.9 velvet.40808 99.88 True fake: scaffold gap size wrong estimation (local) 44561128 44564963 1036702 1040537 NC_000014.9 velvet.40808 99.09 True fake: scaffold gap size wrong estimation (local) 44564964 44567518 1043903 1046457 NC_000014.9 velvet.40808 99.69 True fake: scaffold gap size wrong estimation (local) 44567519 44568519 1047864 1048864 NC_000014.9 velvet.40808 99.5 True fake: scaffold gap size wrong estimation (local) 44568870 44569479 1050948 1051557 NC_000014.9 velvet.40808 99.34 True inversion, scaffold gap is present 44569454 44570278 1052750 1051926 NC_000014.9 velvet.40808 99.64 True relocation, scaffold gap is present, inconsistency = -19939713 64506535 64509156 1055382 1052761 NC_000014.9 velvet.40808 99.96 True fake: not a misassembly (possible transposable element) 64509210 64509725 1056240 1056755 NC_000014.9 velvet.40808 100.0 True fake: not a misassembly (possible transposable element) 64501043 64506236 1061959 1056766 NC_000014.9 velvet.40808 99.94 True relocation, scaffold gap is present, inconsistency = 19946274 44547580 44550916 1069693 1065812 NC_000014.9 velvet.40808 97.71 True fake: scaffold gap size wrong estimation (local) 44542530 44547370 1076375 1070587 NC_000014.9 velvet.40808 98.94 True fake: scaffold gap size wrong estimation (local) 44539359 44541505 1080305 1078097 NC_000014.9 velvet.40808 95.64 True fake: scaffold gap size wrong estimation (local) 44534347 44539201 1086032 1081178 NC_000014.9 velvet.40808 99.96 True fake: scaffold gap size wrong estimation (local) 44531434 44534083 1089738 1087089 NC_000014.9 velvet.40808 99.81 True fake: scaffold gap size wrong estimation (local) 44505330 44510833 1111000 1105404 NC_000014.9 velvet.40808 97.6 True fake: not a misassembly (possible transposable element) 64470590 64471137 1111558 1111011 NC_000014.9 velvet.40808 100.0 True fake: not a misassembly (possible transposable element) 44503698 44504951 1113467 1112214 NC_000014.9 velvet.40808 99.92 True fake: scaffold gap size wrong estimation (local) 44490711 44498503 1128259 1119643 NC_000014.9 velvet.40808 99.74 True fake: scaffold gap size wrong estimation (local) 44486873 44490482 1132806 1129145 NC_000014.9 velvet.40808 99.46 True fake: scaffold gap size wrong estimation (local) 44485453 44486693 1134179 1132939 NC_000014.9 velvet.40808 99.11 True fake: scaffold gap size wrong estimation (local) 44476745 44485029 1144398 1134568 NC_000014.9 velvet.40808 99.66 True CONTIG velvet.40808 1176435 misassembled CONTIG velvet.40810 251 unaligned 93486660 93487557 1 898 NC_000014.9 velvet.40833 99.89 True CONTIG velvet.40833 913 correct 50143912 50144448 4019 3483 NC_000014.9 velvet.40880 100.0 True fake: scaffold gap size wrong estimation (local) 50141254 50141993 7789 7010 NC_000014.9 velvet.40880 99.86 True CONTIG velvet.40880 7789 correct 96609618 96611806 1 2189 NC_000014.9 velvet.40888 99.95 True local misassembly 96607922 96609606 2200 3884 NC_000014.9 velvet.40888 100.0 True fake: scaffold gap size wrong estimation (local) 96612437 96613314 3895 4772 NC_000014.9 velvet.40888 100.0 True fake: scaffold gap size wrong estimation (local) 96613524 96619461 5492 11428 NC_000014.9 velvet.40888 99.9 True fake: scaffold gap size wrong estimation (local) 96619550 96620390 12074 12911 NC_000014.9 velvet.40888 99.52 True fake: scaffold gap size wrong estimation (local) 96626295 96630691 19153 23517 NC_000014.9 velvet.40888 99.18 True CONTIG velvet.40888 23517 correct CONTIG velvet.40916 427 unaligned CONTIG velvet.40930 3645 unaligned CONTIG velvet.40954 238 unaligned CONTIG velvet.40957 225 unaligned CONTIG velvet.40967 3628 unaligned CONTIG velvet.40987 314 unaligned CONTIG velvet.41001 344 unaligned CONTIG velvet.41017 299 unaligned 89262077 89262748 1 672 NC_000014.9 velvet.41035 99.85 True CONTIG velvet.41035 672 correct CONTIG velvet.41066 232 unaligned 86224887 86225783 1 887 NC_000014.9 velvet.41104 98.76 True CONTIG velvet.41104 887 correct CONTIG velvet.41130 226 unaligned CONTIG velvet.41143 306 unaligned CONTIG velvet.41208 246 unaligned CONTIG velvet.41234 225 unaligned CONTIG velvet.41252 213 unaligned CONTIG velvet.41288 562 unaligned 49556768 49557543 1 776 NC_000014.9 velvet.41292 100.0 True CONTIG velvet.41292 776 correct 92753013 92753944 33163 32232 NC_000014.9 velvet.41311 98.61 True local misassembly 92750978 92752822 35008 33164 NC_000014.9 velvet.41311 100.0 True fake: scaffold gap size wrong estimation (local) 92710957 92714986 69927 65898 NC_000014.9 velvet.41311 99.88 True relocation, scaffold gap is present, inconsistency = -7345 92716587 92718291 71642 69938 NC_000014.9 velvet.41311 100.0 True fake: scaffold gap size wrong estimation (local) 92715490 92716436 72961 72015 NC_000014.9 velvet.41311 99.89 True relocation, scaffold gap is present, inconsistency = 13446781 79265263 79267373 74297 76407 NC_000014.9 velvet.41311 100.0 True fake: scaffold gap size wrong estimation (local) 79267726 79269071 77340 78685 NC_000014.9 velvet.41311 100.0 True fake: scaffold gap size wrong estimation (local) 79269350 79272918 79536 83160 NC_000014.9 velvet.41311 100.0 True fake: scaffold gap size wrong estimation (local) 79302898 79308860 110688 116650 NC_000014.9 velvet.41311 100.0 True inversion, scaffold gap is present 79274623 79284214 141111 131454 NC_000014.9 velvet.41311 99.97 True CONTIG velvet.41311 148819 misassembled 82542428 82545104 1 2677 NC_000014.9 velvet.41335 99.96 True fake: scaffold gap size wrong estimation (local) 82545379 82546177 3401 4199 NC_000014.9 velvet.41335 100.0 True CONTIG velvet.41335 4599 correct CONTIG velvet.41342 379 unaligned CONTIG velvet.41359 327 unaligned CONTIG velvet.41361 203 unaligned CONTIG velvet.41386 245 unaligned 52123493 52126940 895 4516 NC_000014.9 velvet.41418 99.36 True fake: scaffold gap size wrong estimation (local) 52127437 52127973 5891 6427 NC_000014.9 velvet.41418 99.63 True fake: scaffold gap size wrong estimation (local) 52128307 52129172 6919 7784 NC_000014.9 velvet.41418 99.77 True CONTIG velvet.41418 8169 correct CONTIG velvet.41451 227 unaligned CONTIG velvet.41456 2592 unaligned 77810035 77810555 1 551 NC_000014.9 velvet.41471 100.0 True fake: scaffold gap size wrong estimation (local) 77811789 77812542 3181 3934 NC_000014.9 velvet.41471 99.87 True CONTIG velvet.41471 7430 correct CONTIG velvet.41475 216 unaligned CONTIG velvet.41485 423 unaligned CONTIG velvet.41530 33052 unaligned 96872064 96876402 5756 1418 NC_000014.9 velvet.41544 99.95 True fake: scaffold gap size wrong estimation (local) 96869065 96870167 9448 8346 NC_000014.9 velvet.41544 100.0 True fake: not a misassembly (possible transposable element) 80379463 80380113 9459 10109 NC_000014.9 velvet.41544 100.0 True fake: not a misassembly (possible transposable element) 96858343 96868798 20892 10265 NC_000014.9 velvet.41544 99.89 True fake: scaffold gap size wrong estimation (local) 96856949 96858072 22749 21626 NC_000014.9 velvet.41544 99.91 True fake: scaffold gap size wrong estimation (local) 96854201 96856680 26084 23605 NC_000014.9 velvet.41544 99.6 True fake: scaffold gap size wrong estimation (local) 96851382 96854177 30227 27432 NC_000014.9 velvet.41544 99.96 True relocation, scaffold gap is present, inconsistency = 20375322 76475074 76476049 31251 30238 NC_000014.9 velvet.41544 99.38 True CONTIG velvet.41544 31251 misassembled CONTIG velvet.41572 3885 unaligned CONTIG velvet.41582 8669 unaligned 34571451 34572710 25209 26462 NC_000014.9 velvet.41642 99.52 True fake: scaffold gap size wrong estimation (local) 34609511 34610199 59061 59749 NC_000014.9 velvet.41642 100.0 True fake: scaffold gap size wrong estimation (local) 34614784 34615485 65800 66501 NC_000014.9 velvet.41642 99.86 True fake: scaffold gap size wrong estimation (local) 34616258 34616885 69759 70386 NC_000014.9 velvet.41642 100.0 True CONTIG velvet.41642 70386 correct 85341701 85342416 1 716 NC_000014.9 velvet.41653 100.0 True CONTIG velvet.41653 716 correct CONTIG velvet.41694 2341 unaligned CONTIG velvet.41699 341 unaligned CONTIG velvet.41710 269 unaligned 34000352 34004445 4206 1 NC_000014.9 velvet.41719 99.85 True fake: scaffold gap size wrong estimation (local) 33999568 34000208 6985 6345 NC_000014.9 velvet.41719 100.0 True relocation, inconsistency = 61270355 95270564 95274727 6986 11149 NC_000014.9 velvet.41719 99.98 True fake: scaffold gap size wrong estimation (local) 95274994 95275786 12270 13062 NC_000014.9 velvet.41719 98.87 True local misassembly 95275927 95276957 13063 14093 NC_000014.9 velvet.41719 95.93 True CONTIG velvet.41719 14093 misassembled CONTIG velvet.41731 242 unaligned 87374595 87378321 5044 1318 NC_000014.9 velvet.41779 99.95 True fake: scaffold gap size wrong estimation (local) 87373514 87374306 6534 5742 NC_000014.9 velvet.41779 100.0 True fake: scaffold gap size wrong estimation (local) 87367824 87373292 12745 7277 NC_000014.9 velvet.41779 99.91 True fake: scaffold gap size wrong estimation (local) 87366883 87367700 14271 13454 NC_000014.9 velvet.41779 100.0 True fake: scaffold gap size wrong estimation (local) 87364162 87366603 17435 14994 NC_000014.9 velvet.41779 99.96 True fake: scaffold gap size wrong estimation (local) 87360828 87363880 21580 18528 NC_000014.9 velvet.41779 99.9 True fake: scaffold gap size wrong estimation (local) 87326983 87343118 57861 41712 NC_000014.9 velvet.41779 99.48 True relocation, scaffold gap is present, inconsistency = 18499691 68826496 68827064 58089 58657 NC_000014.9 velvet.41779 100.0 True fake: scaffold gap size wrong estimation (local) 68828386 68829516 60949 62108 NC_000014.9 velvet.41779 97.24 True fake: scaffold gap size wrong estimation (local) 68831380 68832325 64766 65688 NC_000014.9 velvet.41779 97.44 True fake: scaffold gap size wrong estimation (local) 68833492 68835056 67934 69498 NC_000014.9 velvet.41779 100.0 True relocation, scaffold gap is present, inconsistency = 12183 68852222 68852839 74481 75098 NC_000014.9 velvet.41779 99.84 True relocation, scaffold gap is present, inconsistency = 12707980 81560830 81562222 75109 76501 NC_000014.9 velvet.41779 100.0 True fake: scaffold gap size wrong estimation (local) 81562500 81564453 77826 79779 NC_000014.9 velvet.41779 99.95 True fake: not a misassembly (possible transposable element) 74353212 74353740 82666 83194 NC_000014.9 velvet.41779 99.81 True fake: not a misassembly (possible transposable element) 81565570 81567019 83940 85389 NC_000014.9 velvet.41779 100.0 True relocation, scaffold gap is present, inconsistency = -7225 81559805 81560604 85400 86199 NC_000014.9 velvet.41779 100.0 True relocation, scaffold gap is present, inconsistency = -12704421 68856194 68856878 86210 86894 NC_000014.9 velvet.41779 99.85 True relocation, scaffold gap is present, inconsistency = 17032168 51822553 51824015 88367 86905 NC_000014.9 velvet.41779 99.86 True indel: indel (> 5bp) 51819940 51822552 91039 88427 NC_000014.9 velvet.41779 99.5 True fake: scaffold gap size wrong estimation (local) 51817766 51819939 95007 92834 NC_000014.9 velvet.41779 99.17 True fake: scaffold gap size wrong estimation (local) 51816160 51817765 100109 98504 NC_000014.9 velvet.41779 98.26 True indel: indel (> 5bp) 51814991 51816150 101269 100110 NC_000014.9 velvet.41779 98.88 True fake: scaffold gap size wrong estimation (local) 51813031 51814377 103799 102356 NC_000014.9 velvet.41779 99.92 True relocation, scaffold gap is present, inconsistency = 20188248 72002636 72003618 103810 104792 NC_000014.9 velvet.41779 99.59 True relocation, scaffold gap is present, inconsistency = 9393420 81397049 81404603 112425 104803 NC_000014.9 velvet.41779 99.93 True fake: scaffold gap size wrong estimation (local) 81394171 81396768 116124 113527 NC_000014.9 velvet.41779 99.88 True relocation, scaffold gap is present, inconsistency = 12512206 68880478 68881954 116135 117611 NC_000014.9 velvet.41779 99.86 True fake: scaffold gap size wrong estimation (local) 68883785 68886536 120187 122938 NC_000014.9 velvet.41779 99.96 True fake: scaffold gap size wrong estimation (local) 68887854 68888783 125060 125989 NC_000014.9 velvet.41779 99.68 True relocation, scaffold gap is present, inconsistency = 12468688 81368702 81371398 139916 137220 NC_000014.9 velvet.41779 99.93 True fake: scaffold gap size wrong estimation (local) 81367428 81368430 141969 140967 NC_000014.9 velvet.41779 99.9 True fake: scaffold gap size wrong estimation (local) 81354892 81355715 158539 157716 NC_000014.9 velvet.41779 99.88 True fake: scaffold gap size wrong estimation (local) 81350484 81354732 163817 159513 NC_000014.9 velvet.41779 99.91 True relocation, scaffold gap is present, inconsistency = 10601 81335106 81339872 168594 163828 NC_000014.9 velvet.41779 100.0 True fake: scaffold gap size wrong estimation (local) 81329457 81334834 174971 169594 NC_000014.9 velvet.41779 99.93 True fake: scaffold gap size wrong estimation (local) 81327108 81329171 178145 176082 NC_000014.9 velvet.41779 100.0 True fake: scaffold gap size wrong estimation (local) 81325447 81326966 180684 178655 NC_000014.9 velvet.41779 99.93 True fake: scaffold gap size wrong estimation (local) 81298018 81299565 206536 204987 NC_000014.9 velvet.41779 99.81 True fake: scaffold gap size wrong estimation (local) 81295316 81297755 210371 207932 NC_000014.9 velvet.41779 99.84 True fake: scaffold gap size wrong estimation (local) 81293437 81295039 212977 211375 NC_000014.9 velvet.41779 100.0 True relocation, scaffold gap is present, inconsistency = -28636 81320430 81321243 214620 213807 NC_000014.9 velvet.41779 100.0 True fake: scaffold gap size wrong estimation (local) 81318819 81320426 219420 217813 NC_000014.9 velvet.41779 99.94 True relocation, scaffold gap is present, inconsistency = 14368 81299886 81304440 223980 219431 NC_000014.9 velvet.41779 99.8 True relocation, scaffold gap is present, inconsistency = 20959790 102264249 102265376 223999 225126 NC_000014.9 velvet.41779 100.0 True relocation, scaffold gap is present, inconsistency = 20952937 81283798 81285802 252639 250636 NC_000014.9 velvet.41779 99.85 True fake: scaffold gap size wrong estimation (local) 81281013 81283520 256233 253726 NC_000014.9 velvet.41779 99.92 True fake: scaffold gap size wrong estimation (local) 81279667 81280726 258384 257325 NC_000014.9 velvet.41779 99.81 True relocation, scaffold gap is present, inconsistency = 21015573 102296310 102296817 258395 258902 NC_000014.9 velvet.41779 100.0 True relocation, scaffold gap is present, inconsistency = 14969561 87318993 87326738 266658 258913 NC_000014.9 velvet.41779 99.85 True fake: scaffold gap size wrong estimation (local) 87316522 87318719 270012 267823 NC_000014.9 velvet.41779 99.54 True fake: scaffold gap size wrong estimation (local) 87303188 87314872 284077 272398 NC_000014.9 velvet.41779 99.63 True relocation, scaffold gap is present, inconsistency = 19266152 68034398 68037025 286715 284088 NC_000014.9 velvet.41779 100.0 True relocation, scaffold gap is present, inconsistency = 21966202 90003238 90006478 286726 289966 NC_000014.9 velvet.41779 100.0 True relocation, scaffold gap is present, inconsistency = 2703940 87298355 87299287 290909 289977 NC_000014.9 velvet.41779 99.89 True fake: scaffold gap size wrong estimation (local) 87293612 87298209 296305 291709 NC_000014.9 velvet.41779 99.91 True fake: scaffold gap size wrong estimation (local) 87291353 87292809 299384 297929 NC_000014.9 velvet.41779 99.66 True inversion, scaffold gap is present 87285408 87290876 300409 306753 NC_000014.9 velvet.41779 99.02 True relocation, scaffold gap is present, inconsistency = 7105 87275591 87277162 309465 307894 NC_000014.9 velvet.41779 99.05 True fake: not a misassembly (possible transposable element) 67998536 68001783 312731 309484 NC_000014.9 velvet.41779 100.0 True fake: not a misassembly (possible transposable element) 87268183 87275038 319796 312742 NC_000014.9 velvet.41779 99.6 True relocation, scaffold gap is present, inconsistency = 2763802 90038851 90042752 319807 323738 NC_000014.9 velvet.41779 98.86 True relocation, scaffold gap is present, inconsistency = 22043171 67990265 67995105 329153 324313 NC_000014.9 velvet.41779 99.98 True relocation, scaffold gap is present, inconsistency = 33958829 34029209 34030584 330005 331380 NC_000014.9 velvet.41779 100.0 True fake: scaffold gap size wrong estimation (local) 34034916 34036892 331391 333367 NC_000014.9 velvet.41779 100.0 True fake: scaffold gap size wrong estimation (local) 34037022 34043351 334253 341202 NC_000014.9 velvet.41779 99.9 True fake: scaffold gap size wrong estimation (local) 34043592 34045253 341651 343312 NC_000014.9 velvet.41779 99.94 True fake: scaffold gap size wrong estimation (local) 34046606 34047463 345123 345980 NC_000014.9 velvet.41779 99.88 True fake: scaffold gap size wrong estimation (local) 34048471 34049203 348201 348933 NC_000014.9 velvet.41779 100.0 True fake: scaffold gap size wrong estimation (local) 34049930 34051279 349800 351149 NC_000014.9 velvet.41779 99.93 True fake: scaffold gap size wrong estimation (local) 34051565 34054608 352183 355226 NC_000014.9 velvet.41779 99.9 True fake: scaffold gap size wrong estimation (local) 34054890 34056368 356264 357747 NC_000014.9 velvet.41779 99.6 True relocation, scaffold gap is present, inconsistency = 30846121 64903264 64904800 360046 358522 NC_000014.9 velvet.41779 99.15 True fake: scaffold gap size wrong estimation (local) 64898686 64899189 360648 360145 NC_000014.9 velvet.41779 99.8 True indel: indel (<= 5bp) 64898045 64898683 361287 360649 NC_000014.9 velvet.41779 98.28 True indel: indel (> 5bp) 64897219 64897885 362076 361410 NC_000014.9 velvet.41779 100.0 True relocation, scaffold gap is present, inconsistency = 30879919 34015489 34016797 362579 363887 NC_000014.9 velvet.41779 99.69 True fake: scaffold gap size wrong estimation (local) 34017910 34022072 365840 370134 NC_000014.9 velvet.41779 99.88 True fake: scaffold gap size wrong estimation (local) 34022353 34023407 370974 372028 NC_000014.9 velvet.41779 100.0 True fake: scaffold gap size wrong estimation (local) 34023526 34024148 372146 372768 NC_000014.9 velvet.41779 99.84 True fake: scaffold gap size wrong estimation (local) 34024149 34025353 373840 375044 NC_000014.9 velvet.41779 97.76 True local misassembly 34025610 34026200 375045 375635 NC_000014.9 velvet.41779 98.31 True fake: scaffold gap size wrong estimation (local) 34027609 34028972 378341 379704 NC_000014.9 velvet.41779 99.85 True fake: scaffold gap size wrong estimation (local) 34030871 34033406 382427 384960 NC_000014.9 velvet.41779 99.84 True fake: scaffold gap size wrong estimation (local) 34033582 34034678 386070 387199 NC_000014.9 velvet.41779 98.22 True fake: scaffold gap size wrong estimation (local) 34063363 34065018 410261 411916 NC_000014.9 velvet.41779 99.76 True fake: scaffold gap size wrong estimation (local) 34065278 34071960 412910 419592 NC_000014.9 velvet.41779 99.88 True relocation, scaffold gap is present, inconsistency = -100692 33971279 33973120 419603 421445 NC_000014.9 velvet.41779 99.89 True fake: scaffold gap size wrong estimation (local) 33973400 33974515 422621 423736 NC_000014.9 velvet.41779 99.64 True fake: scaffold gap size wrong estimation (local) 33974833 33976214 424141 425516 NC_000014.9 velvet.41779 99.56 True fake: scaffold gap size wrong estimation (local) 33976485 33977806 426158 427479 NC_000014.9 velvet.41779 99.77 True inversion, scaffold gap is present 33978286 33980468 429898 427616 NC_000014.9 velvet.41779 97.23 True fake: scaffold gap size wrong estimation (local) 33968553 33969893 433582 432242 NC_000014.9 velvet.41779 99.85 True fake: scaffold gap size wrong estimation (local) 33967177 33968374 434941 433749 NC_000014.9 velvet.41779 99.16 True local misassembly 33970521 33971093 435525 434953 NC_000014.9 velvet.41779 99.65 True fake: scaffold gap size wrong estimation (local) 33963853 33966851 440084 437080 NC_000014.9 velvet.41779 99.77 True relocation, scaffold gap is present, inconsistency = 110807 34077669 34078512 440095 440938 NC_000014.9 velvet.41779 100.0 True fake: scaffold gap size wrong estimation (local) 34080013 34080865 443151 444003 NC_000014.9 velvet.41779 100.0 True relocation, scaffold gap is present, inconsistency = 46431419 80512295 80513066 444014 444786 NC_000014.9 velvet.41779 100.0 True inversion, scaffold gap is present 80508192 80509947 446551 444797 NC_000014.9 velvet.41779 99.89 True inversion, scaffold gap is present 80507102 80507953 446562 447413 NC_000014.9 velvet.41779 99.65 True fake: scaffold gap size wrong estimation (local) 80514694 80515928 447424 448658 NC_000014.9 velvet.41779 99.92 True relocation, scaffold gap is present, inconsistency = 46545389 33961815 33962585 456148 455378 NC_000014.9 velvet.41779 95.85 True fake: scaffold gap size wrong estimation (local) 33955709 33960213 463073 458569 NC_000014.9 velvet.41779 99.84 True fake: scaffold gap size wrong estimation (local) 33953478 33955259 466142 464361 NC_000014.9 velvet.41779 99.61 True fake: scaffold gap size wrong estimation (local) 33952324 33953192 468039 467171 NC_000014.9 velvet.41779 100.0 True fake: not a misassembly (possible transposable element) 80540345 80541443 469098 470196 NC_000014.9 velvet.41779 100.0 True fake: not a misassembly (possible transposable element) 33948021 33950859 473045 470207 NC_000014.9 velvet.41779 100.0 True relocation, scaffold gap is present, inconsistency = 46587796 80541497 80547814 475887 482204 NC_000014.9 velvet.41779 99.94 True fake: scaffold gap size wrong estimation (local) 80548104 80552189 483257 487340 NC_000014.9 velvet.41779 99.83 True relocation, scaffold gap is present, inconsistency = -46443144 34109056 34115780 487351 494075 NC_000014.9 velvet.41779 99.79 True fake: scaffold gap size wrong estimation (local) 34115891 34118037 494402 496571 NC_000014.9 velvet.41779 98.48 True fake: scaffold gap size wrong estimation (local) 34118323 34119535 497238 498964 NC_000014.9 velvet.41779 99.92 True relocation, scaffold gap is present, inconsistency = 173379 33944393 33944932 499515 498976 NC_000014.9 velvet.41779 99.63 True fake: scaffold gap size wrong estimation (local) 33939489 33944137 505143 500495 NC_000014.9 velvet.41779 99.96 True fake: scaffold gap size wrong estimation (local) 33929623 33939185 517184 506210 NC_000014.9 velvet.41779 96.62 True fake: scaffold gap size wrong estimation (local) 33901415 33905740 545892 541567 NC_000014.9 velvet.41779 100.0 True fake: scaffold gap size wrong estimation (local) 33896351 33898150 548096 546297 NC_000014.9 velvet.41779 100.0 True fake: scaffold gap size wrong estimation (local) 33894929 33896059 550444 549314 NC_000014.9 velvet.41779 99.91 True local misassembly 33898944 33901128 552631 550455 NC_000014.9 velvet.41779 99.63 True inversion, scaffold gap is present 33875038 33877745 570598 573305 NC_000014.9 velvet.41779 100.0 True relocation, scaffold gap is present, inconsistency = 39942491 73820365 73821439 573434 574508 NC_000014.9 velvet.41779 99.91 True local misassembly 73818614 73819303 575320 576009 NC_000014.9 velvet.41779 100.0 True relocation, scaffold gap is present, inconsistency = 39945361 33871095 33872411 578167 576851 NC_000014.9 velvet.41779 100.0 True fake: scaffold gap size wrong estimation (local) 33865980 33866887 585105 584198 NC_000014.9 velvet.41779 100.0 True fake: scaffold gap size wrong estimation (local) 33864620 33865354 587268 586534 NC_000014.9 velvet.41779 100.0 True fake: scaffold gap size wrong estimation (local) 33861047 33864230 591233 588050 NC_000014.9 velvet.41779 100.0 True fake: scaffold gap size wrong estimation (local) 33859968 33860721 592763 592009 NC_000014.9 velvet.41779 99.6 True fake: scaffold gap size wrong estimation (extensive) 33845157 33850034 599817 594951 NC_000014.9 velvet.41779 99.77 True relocation, scaffold gap is present, inconsistency = -39946838 73788157 73791090 603647 600722 NC_000014.9 velvet.41779 99.66 True fake: scaffold gap size wrong estimation (extensive) 73778364 73779116 604410 603658 NC_000014.9 velvet.41779 99.87 True relocation, scaffold gap is present, inconsistency = 39933450 33838937 33844903 610387 604421 NC_000014.9 velvet.41779 100.0 True relocation, scaffold gap is present, inconsistency = -39989993 73828271 73828919 611046 610398 NC_000014.9 velvet.41779 98.31 True fake: scaffold gap size wrong estimation (local) 73825013 73826208 615056 613861 NC_000014.9 velvet.41779 100.0 True fake: scaffold gap size wrong estimation (local) 73801746 73803341 641296 639667 NC_000014.9 velvet.41779 99.94 True fake: scaffold gap size wrong estimation (local) 73800437 73801477 643490 642450 NC_000014.9 velvet.41779 100.0 True relocation, scaffold gap is present, inconsistency = 18935051 54864119 54865022 644757 643854 NC_000014.9 velvet.41779 98.89 True indel: indel (> 5bp) 54863501 54864039 645296 644758 NC_000014.9 velvet.41779 100.0 True local misassembly 54865055 54866097 646707 645665 NC_000014.9 velvet.41779 100.0 True fake: not a misassembly (possible transposable element) 73797279 73798594 648201 646886 NC_000014.9 velvet.41779 100.0 True fake: not a misassembly (possible transposable element) 54858542 54860527 651363 649378 NC_000014.9 velvet.41779 100.0 True relocation, scaffold gap is present, inconsistency = -18936254 73793845 73794785 652314 651374 NC_000014.9 velvet.41779 99.89 True fake: scaffold gap size wrong estimation (local) 73791875 73793212 655301 653964 NC_000014.9 velvet.41779 96.34 True relocation, scaffold gap is present, inconsistency = 18938457 54852070 54852954 656649 655765 NC_000014.9 velvet.41779 99.89 True relocation, scaffold gap is present, inconsistency = -38285349 93135301 93136381 658767 657687 NC_000014.9 velvet.41779 99.72 True fake: scaffold gap size wrong estimation (local) 93134366 93134934 659956 659388 NC_000014.9 velvet.41779 99.65 True relocation, scaffold gap is present, inconsistency = 19330750 73799560 73800225 664012 663347 NC_000014.9 velvet.41779 100.0 True relocation, scaffold gap is present, inconsistency = 22476514 51321658 51322350 664708 665400 NC_000014.9 velvet.41779 100.0 True relocation, scaffold gap is present, inconsistency = 12726957 64049437 64050745 666838 665530 NC_000014.9 velvet.41779 100.0 True fake: scaffold gap size wrong estimation (local) 64041842 64042452 671030 670420 NC_000014.9 velvet.41779 98.36 True fake: scaffold gap size wrong estimation (local) 64038876 64041575 673997 671296 NC_000014.9 velvet.41779 99.7 True relocation, scaffold gap is present, inconsistency = -7537 64044693 64046385 675717 674025 NC_000014.9 velvet.41779 99.82 True relocation, scaffold gap is present, inconsistency = 9184919 54856723 54858114 678768 677377 NC_000014.9 velvet.41779 100.0 True fake: scaffold gap size wrong estimation (local) 54848405 54849995 680369 678779 NC_000014.9 velvet.41779 99.87 True fake: scaffold gap size wrong estimation (local) 54846891 54847551 682940 682235 NC_000014.9 velvet.41779 99.18 True fake: scaffold gap size wrong estimation (local) 54845460 54846772 684263 682951 NC_000014.9 velvet.41779 100.0 True fake: scaffold gap size wrong estimation (local) 54839042 54844920 691464 685586 NC_000014.9 velvet.41779 99.93 True fake: scaffold gap size wrong estimation (local) 54837380 54838212 693853 693021 NC_000014.9 velvet.41779 97.84 True fake: scaffold gap size wrong estimation (local) 54836180 54836733 695394 694841 NC_000014.9 velvet.41779 100.0 True fake: scaffold gap size wrong estimation (local) 54834737 54835973 697007 695771 NC_000014.9 velvet.41779 100.0 True fake: scaffold gap size wrong estimation (local) 54833117 54834438 699753 698432 NC_000014.9 velvet.41779 99.85 True relocation, scaffold gap is present, inconsistency = 3475874 51352703 51353215 703781 704293 NC_000014.9 velvet.41779 100.0 True fake: scaffold gap size wrong estimation (local) 51353508 51356819 705312 708623 NC_000014.9 velvet.41779 100.0 True fake: scaffold gap size wrong estimation (local) 51356933 51362412 708741 714243 NC_000014.9 velvet.41779 99.4 True fake: scaffold gap size wrong estimation (local) 51362697 51366649 715343 719295 NC_000014.9 velvet.41779 99.97 True fake: scaffold gap size wrong estimation (local) 51367235 51369288 720669 722722 NC_000014.9 velvet.41779 99.95 True fake: scaffold gap size wrong estimation (local) 51369571 51372584 723505 726879 NC_000014.9 velvet.41779 99.97 True fake: scaffold gap size wrong estimation (local) 51372781 51373553 727699 728471 NC_000014.9 velvet.41779 100.0 True relocation, scaffold gap is present, inconsistency = 12638606 64013326 64014446 730758 729638 NC_000014.9 velvet.41779 99.64 True relocation, scaffold gap is present, inconsistency = -9738431 73749458 73751628 733041 730887 NC_000014.9 velvet.41779 97.57 True fake: scaffold gap size wrong estimation (local) 73738294 73748398 745234 734999 NC_000014.9 velvet.41779 99.91 True fake: scaffold gap size wrong estimation (local) 73734658 73735389 749394 748663 NC_000014.9 velvet.41779 99.86 True CONTIG velvet.41779 750962 misassembled CONTIG velvet.41795 466 unaligned 89713909 89714638 205 930 NC_000014.9 velvet.41823 99.44 True CONTIG velvet.41823 1403 correct CONTIG velvet.41863 420 unaligned CONTIG velvet.41875 238 unaligned CONTIG velvet.41876 475 unaligned CONTIG velvet.41910 321 unaligned CONTIG velvet.41941 301 unaligned CONTIG velvet.41953 321 unaligned 67325206 67325825 3076 3695 NC_000014.9 velvet.41986 100.0 True CONTIG velvet.41986 3695 correct 82950357 82956820 7890 345 NC_000014.9 velvet.41997 99.53 True fake: scaffold gap size wrong estimation (local) 82948324 82950069 10816 9071 NC_000014.9 velvet.41997 99.77 True fake: scaffold gap size wrong estimation (local) 82922180 82925893 35287 30898 NC_000014.9 velvet.41997 99.89 True fake: scaffold gap size wrong estimation (local) 82914599 82922045 43515 36080 NC_000014.9 velvet.41997 99.72 True fake: scaffold gap size wrong estimation (local) 82895856 82914314 64776 44672 NC_000014.9 velvet.41997 99.81 True relocation, scaffold gap is present, inconsistency = 23399931 59493071 59495914 67658 64787 NC_000014.9 velvet.41997 100.0 True fake: scaffold gap size wrong estimation (local) 59490202 59492785 71326 68743 NC_000014.9 velvet.41997 99.88 True relocation, scaffold gap is present, inconsistency = -2914903 62401206 62404178 75225 72253 NC_000014.9 velvet.41997 99.97 True fake: scaffold gap size wrong estimation (local) 62397312 62400922 79874 76264 NC_000014.9 velvet.41997 99.92 True relocation, scaffold gap is present, inconsistency = 32800511 95203269 95206966 81710 85407 NC_000014.9 velvet.41997 99.73 True relocation, scaffold gap is present, inconsistency = 35748443 59449750 59454815 90491 85418 NC_000014.9 velvet.41997 99.86 True relocation, scaffold gap is present, inconsistency = 35747509 95202335 95203164 90502 91331 NC_000014.9 velvet.41997 99.88 True fake: scaffold gap size wrong estimation (local) 95208784 95210068 91342 92626 NC_000014.9 velvet.41997 99.92 True relocation, scaffold gap is present, inconsistency = 35740178 59465279 59468595 96784 92637 NC_000014.9 velvet.41997 99.85 True fake: scaffold gap size wrong estimation (local) 59455099 59463996 108321 98819 NC_000014.9 velvet.41997 99.98 True relocation, scaffold gap is present, inconsistency = 11370421 70834428 70839201 108332 113083 NC_000014.9 velvet.41997 99.27 True fake: scaffold gap size wrong estimation (local) 70839944 70841174 114669 115899 NC_000014.9 velvet.41997 100.0 True local misassembly 70841398 70842051 115900 116553 NC_000014.9 velvet.41997 95.57 True relocation, scaffold gap is present, inconsistency = -33936409 36905653 36906524 116564 117435 NC_000014.9 velvet.41997 100.0 True relocation, scaffold gap is present, inconsistency = 58313944 95220479 95224360 117446 121327 NC_000014.9 velvet.41997 99.97 True fake: scaffold gap size wrong estimation (local) 95224585 95228846 122082 126699 NC_000014.9 velvet.41997 98.29 True relocation, scaffold gap is present, inconsistency = 35755305 59468627 59469269 127352 126710 NC_000014.9 velvet.41997 100.0 True relocation, scaffold gap is present, inconsistency = 34958 59433135 59433658 127886 127363 NC_000014.9 velvet.41997 99.81 True relocation, scaffold gap is present, inconsistency = 35809202 95242871 95245129 127897 130114 NC_000014.9 velvet.41997 97.91 True fake: scaffold gap size wrong estimation (local) 95245303 95246478 130797 131924 NC_000014.9 velvet.41997 95.88 True fake: scaffold gap size wrong estimation (local) 95246723 95249617 132650 135629 NC_000014.9 velvet.41997 100.0 True fake: scaffold gap size wrong estimation (local) 95249840 95253629 136602 140391 NC_000014.9 velvet.41997 100.0 True fake: scaffold gap size wrong estimation (extensive) 95262818 95264034 140402 141597 NC_000014.9 velvet.41997 98.18 True relocation, scaffold gap is present, inconsistency = -24398083 70869041 70869733 144687 145379 NC_000014.9 velvet.41997 99.86 True fake: scaffold gap size wrong estimation (local) 70870035 70872518 146238 148721 NC_000014.9 velvet.41997 99.92 True relocation, scaffold gap is present, inconsistency = 4427906 75301563 75302065 150362 149860 NC_000014.9 velvet.41997 100.0 True relocation, scaffold gap is present, inconsistency = -9271 75306911 75308593 154285 152603 NC_000014.9 velvet.41997 99.88 True fake: scaffold gap size wrong estimation (local) 75304519 75305228 157702 156993 NC_000014.9 velvet.41997 100.0 True fake: scaffold gap size wrong estimation (local) 75276417 75282801 182264 175882 NC_000014.9 velvet.41997 99.84 True fake: scaffold gap size wrong estimation (local) 75274761 75276126 184699 183334 NC_000014.9 velvet.41997 99.85 True fake: scaffold gap size wrong estimation (local) 75273207 75274507 186605 185246 NC_000014.9 velvet.41997 99.76 True fake: scaffold gap size wrong estimation (local) 75271894 75272938 191140 190096 NC_000014.9 velvet.41997 100.0 True fake: scaffold gap size wrong estimation (local) 75268193 75269795 195504 193911 NC_000014.9 velvet.41997 99.31 True fake: scaffold gap size wrong estimation (local) 75265719 75266404 198834 198149 NC_000014.9 velvet.41997 100.0 True local misassembly 75266879 75268099 200291 199071 NC_000014.9 velvet.41997 99.92 True fake: scaffold gap size wrong estimation (local) 75262522 75263395 202737 201864 NC_000014.9 velvet.41997 100.0 True fake: scaffold gap size wrong estimation (local) 75261701 75262365 203542 202878 NC_000014.9 velvet.41997 100.0 True relocation, scaffold gap is present, inconsistency = 2395087 72866055 72866603 203553 204101 NC_000014.9 velvet.41997 100.0 True fake: scaffold gap size wrong estimation (local) 72867175 72867791 204411 205027 NC_000014.9 velvet.41997 100.0 True fake: scaffold gap size wrong estimation (local) 72867899 72870833 205969 208937 NC_000014.9 velvet.41997 98.82 True CONTIG velvet.41997 209260 misassembled CONTIG velvet.42015 200 unaligned CONTIG velvet.42019 263 unaligned CONTIG velvet.42046 257 unaligned 84716930 84717951 985 1 NC_000014.9 velvet.42059 95.06 True CONTIG velvet.42059 1472 correct 75349219 75352087 115 2983 NC_000014.9 velvet.42102 99.97 True fake: scaffold gap size wrong estimation (local) 75352178 75352917 3184 3923 NC_000014.9 velvet.42102 100.0 True fake: scaffold gap size wrong estimation (local) 75353069 75354156 4543 5630 NC_000014.9 velvet.42102 99.72 True fake: scaffold gap size wrong estimation (local) 75354304 75357618 6236 9546 NC_000014.9 velvet.42102 99.82 True fake: scaffold gap size wrong estimation (local) 75383370 75384254 34163 35036 NC_000014.9 velvet.42102 98.74 True local misassembly 75378071 75382277 35047 39306 NC_000014.9 velvet.42102 99.95 True relocation, scaffold gap is present, inconsistency = 25434942 49942023 49943118 40432 39317 NC_000014.9 velvet.42102 98.12 True fake: scaffold gap size wrong estimation (local) 49939662 49941753 43606 41515 NC_000014.9 velvet.42102 100.0 True relocation, scaffold gap is present, inconsistency = 42663077 92607621 92608552 46397 47328 NC_000014.9 velvet.42102 100.0 True relocation, scaffold gap is present, inconsistency = 720144 93331856 93336344 55038 50488 NC_000014.9 velvet.42102 99.87 True fake: scaffold gap size wrong estimation (local) 93329100 93331664 58556 55992 NC_000014.9 velvet.42102 99.96 True relocation, scaffold gap is present, inconsistency = 43390525 49934182 49935145 62949 61986 NC_000014.9 velvet.42102 98.86 True local misassembly 49932998 49933843 63795 62950 NC_000014.9 velvet.42102 100.0 True fake: scaffold gap size wrong estimation (local) 49930634 49931323 67124 66435 NC_000014.9 velvet.42102 100.0 True fake: scaffold gap size wrong estimation (local) 49927476 49928969 71370 69877 NC_000014.9 velvet.42102 100.0 True fake: scaffold gap size wrong estimation (local) 49926288 49927234 73143 72197 NC_000014.9 velvet.42102 100.0 True relocation, scaffold gap is present, inconsistency = 25452965 75384289 75385342 77233 78286 NC_000014.9 velvet.42102 100.0 True fake: scaffold gap size wrong estimation (local) 75385606 75386430 78526 79350 NC_000014.9 velvet.42102 100.0 True fake: scaffold gap size wrong estimation (local) 75386652 75390897 80370 84656 NC_000014.9 velvet.42102 99.95 True fake: scaffold gap size wrong estimation (local) 75392242 75394286 86820 88864 NC_000014.9 velvet.42102 99.95 True CONTIG velvet.42102 88864 misassembled 50310438 50310945 1 508 NC_000014.9 velvet.42133 100.0 True CONTIG velvet.42133 508 correct CONTIG velvet.42139 275 unaligned CONTIG velvet.42152 234 unaligned CONTIG velvet.42154 256 unaligned CONTIG velvet.42182 207 unaligned CONTIG velvet.42191 363 unaligned CONTIG velvet.42213 243 unaligned CONTIG velvet.42244 254 unaligned CONTIG velvet.42265 33278 unaligned 106662043 106663072 1073 44 NC_000014.9 velvet.42266 99.51 True indel: indel (<= 5bp) 106661529 106662042 1592 1079 NC_000014.9 velvet.42266 99.81 True local misassembly 106660319 106661065 2349 1603 NC_000014.9 velvet.42266 98.8 True fake: scaffold gap size wrong estimation (local) 106658200 106659966 5695 3921 NC_000014.9 velvet.42266 99.89 True inversion, scaffold gap is present 106663073 106663944 5706 6577 NC_000014.9 velvet.42266 99.89 True relocation, scaffold gap is present, inconsistency = 532064 106127029 106128648 10557 8938 NC_000014.9 velvet.42266 99.69 True CONTIG velvet.42266 42615 misassembled CONTIG velvet.42269 267 unaligned 90160848 90161950 32074 30972 NC_000014.9 velvet.42294 99.73 True fake: scaffold gap size wrong estimation (local) 90152635 90155918 35218 32085 NC_000014.9 velvet.42294 95.16 True fake: scaffold gap size wrong estimation (local) 90113898 90117305 70804 67397 NC_000014.9 velvet.42294 99.85 True relocation, scaffold gap is present, inconsistency = 6215178 83888938 83897491 72033 80585 NC_000014.9 velvet.42294 99.91 True fake: scaffold gap size wrong estimation (local) 83925798 83926405 107519 108126 NC_000014.9 velvet.42294 99.84 True fake: scaffold gap size wrong estimation (local) 83926645 83927411 108738 109504 NC_000014.9 velvet.42294 100.0 True fake: scaffold gap size wrong estimation (local) 83927804 83928810 109845 110851 NC_000014.9 velvet.42294 99.01 True fake: scaffold gap size wrong estimation (local) 83958433 83961837 140059 143463 NC_000014.9 velvet.42294 99.79 True indel: indel (<= 5bp) 83961941 83964832 143566 146640 NC_000014.9 velvet.42294 100.0 True CONTIG velvet.42294 146640 misassembled CONTIG velvet.42305 374 unaligned CONTIG velvet.42310 202 unaligned CONTIG velvet.42368 331 unaligned CONTIG velvet.42384 3710 unaligned CONTIG velvet.42412 253 unaligned CONTIG velvet.42455 4061 unaligned CONTIG velvet.42522 279 unaligned 22656154 22658489 165 2500 NC_000014.9 velvet.42564 99.91 True fake: scaffold gap size wrong estimation (local) 22658675 22660074 3613 5012 NC_000014.9 velvet.42564 99.93 True fake: scaffold gap size wrong estimation (local) 22684595 22685714 25830 26949 NC_000014.9 velvet.42564 99.91 True CONTIG velvet.42564 32942 correct CONTIG velvet.42573 495 unaligned CONTIG velvet.42600 296 unaligned CONTIG velvet.42610 3551 unaligned CONTIG velvet.42638 304 unaligned 21808064 21808707 1 644 NC_000014.9 velvet.42681 99.84 True CONTIG velvet.42681 644 correct CONTIG velvet.42749 215 unaligned CONTIG velvet.42777 277 unaligned CONTIG velvet.42797 322 unaligned CONTIG velvet.42830 320 unaligned 67661302 67661937 1 678 NC_000014.9 velvet.42856 99.66 True fake: scaffold gap size wrong estimation (local) 67663671 67664511 3387 4227 NC_000014.9 velvet.42856 99.88 True CONTIG velvet.42856 4227 correct CONTIG velvet.42876 200 unaligned 36407229 36407772 3885 3342 NC_000014.9 velvet.42878 99.82 True CONTIG velvet.42878 3885 correct 63752883 63753622 4046 4785 NC_000014.9 velvet.42888 100.0 True fake: scaffold gap size wrong estimation (local) 63755096 63755735 5833 6472 NC_000014.9 velvet.42888 100.0 True fake: scaffold gap size wrong estimation (local) 63755991 63756837 8861 9707 NC_000014.9 velvet.42888 100.0 True local misassembly 63757112 63757720 9708 10316 NC_000014.9 velvet.42888 98.36 True fake: scaffold gap size wrong estimation (local) 63759389 63760271 13002 13884 NC_000014.9 velvet.42888 100.0 True fake: scaffold gap size wrong estimation (local) 63761225 63762177 16153 17105 NC_000014.9 velvet.42888 99.79 True fake: scaffold gap size wrong estimation (local) 63763670 63764424 19600 20354 NC_000014.9 velvet.42888 100.0 True CONTIG velvet.42888 20448 correct CONTIG velvet.42907 248 unaligned CONTIG velvet.42913 264 unaligned 81348668 81350464 1885 118 NC_000014.9 velvet.42927 97.88 True fake: scaffold gap size wrong estimation (local) 81347903 81348586 2716 2008 NC_000014.9 velvet.42927 95.36 True fake: scaffold gap size wrong estimation (local) 81345762 81347787 5662 3593 NC_000014.9 velvet.42927 99.8 True fake: scaffold gap size wrong estimation (local) 81342405 81345640 11811 8576 NC_000014.9 velvet.42927 99.97 True fake: scaffold gap size wrong estimation (local) 81340143 81342144 14772 12732 NC_000014.9 velvet.42927 100.0 True relocation, scaffold gap is present, inconsistency = -13239963 94577760 94579577 17118 15301 NC_000014.9 velvet.42927 99.83 True relocation, scaffold gap is present, inconsistency = 13260165 81306337 81307886 26827 28375 NC_000014.9 velvet.42927 99.68 True relocation, scaffold gap is present, inconsistency = 13465 81321362 81325424 32448 28386 NC_000014.9 velvet.42927 99.7 True local misassembly 81317011 81317988 33426 32449 NC_000014.9 velvet.42927 99.8 True fake: scaffold gap size wrong estimation (local) 81314983 81316702 35915 34193 NC_000014.9 velvet.42927 99.65 True relocation, scaffold gap is present, inconsistency = 20945526 102262239 102263958 35926 37641 NC_000014.9 velvet.42927 99.77 True fake: scaffold gap size wrong estimation (local) 102265546 102266632 39987 41073 NC_000014.9 velvet.42927 100.0 True relocation, scaffold gap is present, inconsistency = 20956873 81304729 81306142 45017 43604 NC_000014.9 velvet.42927 99.65 True fake: not a misassembly (possible transposable element) 81309101 81313513 49440 45028 NC_000014.9 velvet.42927 99.57 True fake: not a misassembly (possible transposable element) 81270360 81271981 75891 74270 NC_000014.9 velvet.42927 99.82 True fake: scaffold gap size wrong estimation (local) 81269240 81270265 77245 76220 NC_000014.9 velvet.42927 99.9 True fake: scaffold gap size wrong estimation (local) 81265677 81269098 81427 78016 NC_000014.9 velvet.42927 99.62 True fake: scaffold gap size wrong estimation (local) 81263538 81265375 84319 82492 NC_000014.9 velvet.42927 99.29 True fake: scaffold gap size wrong estimation (local) 81260441 81263295 88099 85245 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 81259098 81260236 90126 88988 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 81258252 81258819 91359 90792 NC_000014.9 velvet.42927 98.24 True relocation, scaffold gap is present, inconsistency = 60060353 21190664 21191470 98594 97788 NC_000014.9 velvet.42927 100.0 True relocation, scaffold gap is present, inconsistency = 756005 20417520 20419028 115733 114225 NC_000014.9 velvet.42927 99.87 True relocation, scaffold gap is present, inconsistency = 74213631 94633301 94634864 116375 117938 NC_000014.9 velvet.42927 99.94 True indel: indel (> 5bp) 94634865 94637422 117969 120526 NC_000014.9 velvet.42927 99.65 True relocation, scaffold gap is present, inconsistency = 74217014 20415696 20417233 122681 121144 NC_000014.9 velvet.42927 99.93 True fake: scaffold gap size wrong estimation (local) 20412929 20415447 126333 123817 NC_000014.9 velvet.42927 99.84 True fake: scaffold gap size wrong estimation (local) 20411095 20412670 128783 127282 NC_000014.9 velvet.42927 95.21 True fake: scaffold gap size wrong estimation (local) 20408689 20409734 131787 130742 NC_000014.9 velvet.42927 100.0 True indel: indel (<= 5bp) 20408106 20408684 132366 131788 NC_000014.9 velvet.42927 98.27 True relocation, scaffold gap is present, inconsistency = -41101992 61505620 61509599 136844 132865 NC_000014.9 velvet.42927 99.72 True fake: scaffold gap size wrong estimation (local) 61500414 61502037 138478 136855 NC_000014.9 velvet.42927 99.88 True relocation, scaffold gap is present, inconsistency = 7787556 53710014 53712769 141322 138567 NC_000014.9 velvet.42927 99.71 True fake: scaffold gap size wrong estimation (local) 53708187 53709735 143787 142244 NC_000014.9 velvet.42927 99.61 True relocation, scaffold gap is present, inconsistency = -27542356 81249225 81250521 145107 143809 NC_000014.9 velvet.42927 99.77 True relocation, scaffold gap is present, inconsistency = 13403128 94653862 94656440 145320 149176 NC_000014.9 velvet.42927 99.68 True relocation, scaffold gap is present, inconsistency = 13421966 81227269 81228430 153803 152642 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 81225411 81226054 156044 155401 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 81224186 81224887 157163 156462 NC_000014.9 velvet.42927 100.0 True relocation, scaffold gap is present, inconsistency = 13434016 94658914 94663593 157174 161853 NC_000014.9 velvet.42927 99.59 True fake: scaffold gap size wrong estimation (local) 94663701 94666399 162762 165439 NC_000014.9 velvet.42927 98.76 True fake: scaffold gap size wrong estimation (local) 94666490 94668284 166311 168084 NC_000014.9 velvet.42927 98.43 True fake: scaffold gap size wrong estimation (local) 94668395 94669403 168262 169270 NC_000014.9 velvet.42927 99.9 True relocation, scaffold gap is present, inconsistency = 35729366 58935458 58935975 172841 172324 NC_000014.9 velvet.42927 97.68 True relocation, scaffold gap is present, inconsistency = -2543401 61474691 61478594 177009 173106 NC_000014.9 velvet.42927 99.85 True relocation, scaffold gap is present, inconsistency = -8519 61478702 61481979 181512 178240 NC_000014.9 velvet.42927 99.45 True relocation, scaffold gap is present, inconsistency = 41093287 20377216 20385404 189711 181523 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 20375422 20376944 192290 190768 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 20374208 20374804 193906 193310 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 20370182 20374073 198579 194614 NC_000014.9 velvet.42927 99.97 True relocation, scaffold gap is present, inconsistency = -57605031 77971661 77975202 202131 198590 NC_000014.9 velvet.42927 99.94 True fake: scaffold gap size wrong estimation (local) 77966818 77968323 203648 202142 NC_000014.9 velvet.42927 99.87 True local misassembly 77968593 77971051 206440 203982 NC_000014.9 velvet.42927 99.96 True relocation, scaffold gap is present, inconsistency = 131810 77835833 77836772 206451 207390 NC_000014.9 velvet.42927 99.89 True relocation, scaffold gap is present, inconsistency = 57460726 20369278 20369855 213219 212642 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 20367883 20369007 214909 213736 NC_000014.9 velvet.42927 95.66 True relocation, scaffold gap is present, inconsistency = -60856321 81220936 81223771 218174 215342 NC_000014.9 velvet.42927 99.86 True fake: scaffold gap size wrong estimation (local) 81217746 81220182 222214 219701 NC_000014.9 velvet.42927 99.88 True relocation, scaffold gap is present, inconsistency = 13451933 94672126 94674698 222225 224814 NC_000014.9 velvet.42927 99.68 True fake: scaffold gap size wrong estimation (local) 94675265 94676243 225884 226862 NC_000014.9 velvet.42927 99.69 True fake: scaffold gap size wrong estimation (local) 94676484 94683203 227641 234360 NC_000014.9 velvet.42927 99.87 True fake: scaffold gap size wrong estimation (local) 94683488 94684254 235120 235886 NC_000014.9 velvet.42927 100.0 True relocation, scaffold gap is present, inconsistency = 17997104 76664631 76666252 257642 256018 NC_000014.9 velvet.42927 99.75 True local misassembly 76669761 76670608 259178 258331 NC_000014.9 velvet.42927 99.88 True fake: scaffold gap size wrong estimation (local) 76668634 76669474 260591 259751 NC_000014.9 velvet.42927 99.88 True fake: scaffold gap size wrong estimation (local) 76666501 76668347 263272 261426 NC_000014.9 velvet.42927 99.84 True fake: scaffold gap size wrong estimation (extensive) 76653766 76657478 266995 263283 NC_000014.9 velvet.42927 99.95 True fake: scaffold gap size wrong estimation (local) 76633534 76634645 288971 287860 NC_000014.9 velvet.42927 99.64 True fake: scaffold gap size wrong estimation (local) 76625034 76626780 291427 289681 NC_000014.9 velvet.42927 99.83 True fake: scaffold gap size wrong estimation (local) 76623030 76624780 294364 292596 NC_000014.9 velvet.42927 97.29 True relocation, scaffold gap is present, inconsistency = 18060060 94684851 94687205 294375 296785 NC_000014.9 velvet.42927 99.83 True fake: scaffold gap size wrong estimation (local) 94687461 94688083 297485 298106 NC_000014.9 velvet.42927 99.68 True fake: scaffold gap size wrong estimation (local) 94688972 94692735 299544 303375 NC_000014.9 velvet.42927 99.89 True relocation, scaffold gap is present, inconsistency = -23693 94669768 94670390 304101 304723 NC_000014.9 velvet.42927 99.52 True fake: scaffold gap size wrong estimation (local) 94670593 94671463 304872 305722 NC_000014.9 velvet.42927 97.1 True relocation, scaffold gap is present, inconsistency = 55476 94727244 94728346 307129 306027 NC_000014.9 velvet.42927 100.0 True relocation, scaffold gap is present, inconsistency = 15043 94708260 94709765 309565 311045 NC_000014.9 velvet.42927 98.26 True fake: scaffold gap size wrong estimation (local) 94709979 94712492 312125 314638 NC_000014.9 velvet.42927 98.35 True fake: scaffold gap size wrong estimation (local) 94712732 94714136 315773 317177 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 94718356 94720272 317188 319049 NC_000014.9 velvet.42927 97.12 True relocation, scaffold gap is present, inconsistency = -17646 94702637 94703449 319060 319872 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (extensive) 94715551 94716139 322035 322623 NC_000014.9 velvet.42927 98.3 True fake: scaffold gap size wrong estimation (local) 94723810 94724551 323789 324530 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 94724566 94725419 325499 326352 NC_000014.9 velvet.42927 100.0 True local misassembly 94725630 94726291 326353 327014 NC_000014.9 velvet.42927 98.49 True relocation, scaffold gap is present, inconsistency = 18096161 76627346 76628994 329137 327489 NC_000014.9 velvet.42927 99.94 True relocation, scaffold gap is present, inconsistency = 40734118 35891627 35892986 329379 330765 NC_000014.9 velvet.42927 98.59 True relocation, scaffold gap is present, inconsistency = 58825784 94720682 94721701 332677 333696 NC_000014.9 velvet.42927 100.0 True local misassembly 94716715 94718101 333707 335093 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 94721975 94723399 335104 336528 NC_000014.9 velvet.42927 100.0 True relocation, scaffold gap is present, inconsistency = -18395 94705015 94705599 336539 337123 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 94705720 94708040 338033 340353 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 94748300 94749535 376926 378858 NC_000014.9 velvet.42927 99.75 True fake: scaffold gap size wrong estimation (local) 94749810 94751774 379421 381385 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 94752017 94753957 382363 384303 NC_000014.9 velvet.42927 100.0 True fake: not a misassembly (possible transposable element) 94743362 94744137 384314 385089 NC_000014.9 velvet.42927 100.0 True fake: not a misassembly (possible transposable element) 94754237 94754855 385100 385718 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 94755137 94755679 386165 386707 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 94755938 94756944 386999 388005 NC_000014.9 velvet.42927 100.0 True relocation, scaffold gap is present, inconsistency = 63754948 30999317 31000823 389669 388172 NC_000014.9 velvet.42927 99.33 True fake: scaffold gap size wrong estimation (local) 30996853 30999073 393020 390799 NC_000014.9 velvet.42927 99.95 True fake: scaffold gap size wrong estimation (local) 30994138 30996589 396580 394196 NC_000014.9 velvet.42927 97.19 True fake: scaffold gap size wrong estimation (local) 30992758 30993672 398792 397828 NC_000014.9 velvet.42927 99.77 True fake: scaffold gap size wrong estimation (local) 30990438 30992125 401330 399643 NC_000014.9 velvet.42927 99.88 True relocation, scaffold gap is present, inconsistency = -40211810 71197692 71202237 405997 401341 NC_000014.9 velvet.42927 99.96 True relocation, scaffold gap is present, inconsistency = -13192 71206737 71210746 410144 406135 NC_000014.9 velvet.42927 99.93 True inversion, scaffold gap is present 71212110 71213289 410155 411335 NC_000014.9 velvet.42927 99.75 True indel: indel (> 5bp) 71213339 71216075 411400 414184 NC_000014.9 velvet.42927 99.74 True fake: scaffold gap size wrong estimation (local) 71216344 71218788 415345 417770 NC_000014.9 velvet.42927 99.1 True fake: scaffold gap size wrong estimation (local) 71219075 71219558 418185 418705 NC_000014.9 velvet.42927 99.77 True fake: scaffold gap size wrong estimation (local) 71225933 71226975 418716 419758 NC_000014.9 velvet.42927 100.0 True relocation, scaffold gap is present, inconsistency = -7194 71219792 71222123 419769 422019 NC_000014.9 velvet.42927 96.47 True fake: scaffold gap size wrong estimation (local) 71223575 71224329 422262 423016 NC_000014.9 velvet.42927 98.54 True local misassembly 71224341 71224990 423397 424046 NC_000014.9 velvet.42927 98.31 True indel: indel (> 5bp) 71225063 71225657 424047 424641 NC_000014.9 velvet.42927 97.98 True relocation, scaffold gap is present, inconsistency = 20404747 50818320 50818878 426637 426079 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 50815954 50817756 429349 427540 NC_000014.9 velvet.42927 97.52 True fake: scaffold gap size wrong estimation (local) 50812090 50814571 433905 431424 NC_000014.9 velvet.42927 99.92 True fake: scaffold gap size wrong estimation (local) 50809106 50809969 437561 436697 NC_000014.9 velvet.42927 99.65 True fake: scaffold gap size wrong estimation (local) 50794765 50795811 453151 452105 NC_000014.9 velvet.42927 99.81 True relocation, scaffold gap is present, inconsistency = -27137641 77929925 77932079 455632 453478 NC_000014.9 velvet.42927 99.86 True fake: scaffold gap size wrong estimation (local) 77928731 77929640 457307 456398 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 77921345 77923509 459482 457318 NC_000014.9 velvet.42927 99.86 True local misassembly 77923541 77924261 460213 459493 NC_000014.9 velvet.42927 99.86 True relocation, scaffold gap is present, inconsistency = 27133951 50783308 50789290 466495 460513 NC_000014.9 velvet.42927 99.88 True fake: scaffold gap size wrong estimation (local) 50779760 50783195 470800 467368 NC_000014.9 velvet.42927 99.74 True relocation, scaffold gap is present, inconsistency = 20472926 71256493 71258740 471172 473419 NC_000014.9 velvet.42927 99.96 True fake: scaffold gap size wrong estimation (local) 71258840 71260650 473524 475337 NC_000014.9 velvet.42927 99.72 True fake: scaffold gap size wrong estimation (local) 71260935 71261889 476021 476975 NC_000014.9 velvet.42927 99.9 True fake: scaffold gap size wrong estimation (local) 71263721 71269029 479518 485578 NC_000014.9 velvet.42927 97.96 True fake: scaffold gap size wrong estimation (local) 71272080 71277186 490538 495644 NC_000014.9 velvet.42927 99.9 True relocation, scaffold gap is present, inconsistency = 13730 71290927 71293223 495655 497921 NC_000014.9 velvet.42927 98.44 True relocation, scaffold gap is present, inconsistency = 20542167 50744861 50747521 501904 499160 NC_000014.9 velvet.42927 98.83 True fake: scaffold gap size wrong estimation (local) 50737917 50740105 504440 502252 NC_000014.9 velvet.42927 99.86 True fake: scaffold gap size wrong estimation (extensive) 50728055 50729238 505666 504483 NC_000014.9 velvet.42927 99.92 True relocation, scaffold gap is present, inconsistency = -9444 50734936 50737488 508429 505677 NC_000014.9 velvet.42927 99.96 True relocation, scaffold gap is present, inconsistency = -27121850 77856189 77856775 509027 508440 NC_000014.9 velvet.42927 99.66 True local misassembly 77856987 77858237 510763 509429 NC_000014.9 velvet.42927 99.43 True relocation, scaffold gap is present, inconsistency = 6552634 71303624 71304272 511492 510844 NC_000014.9 velvet.42927 99.85 True fake: not a misassembly (possible transposable element) 50743146 50744663 513196 511679 NC_000014.9 velvet.42927 95.39 True fake: not a misassembly (possible transposable element) 71301132 71302615 514996 513513 NC_000014.9 velvet.42927 99.93 True relocation, scaffold gap is present, inconsistency = 20558948 50740754 50742173 516429 515007 NC_000014.9 velvet.42927 99.79 True relocation, scaffold gap is present, inconsistency = 20556556 71298938 71301117 516638 518817 NC_000014.9 velvet.42927 100.0 True inversion, scaffold gap is present 71297063 71298488 520253 518828 NC_000014.9 velvet.42927 99.93 True fake: scaffold gap size wrong estimation (local) 71295956 71296807 521405 520554 NC_000014.9 velvet.42927 100.0 True inversion, scaffold gap is present 71294696 71295882 521416 522602 NC_000014.9 velvet.42927 99.66 True relocation, scaffold gap is present, inconsistency = 13668 71279677 71281017 523953 522613 NC_000014.9 velvet.42927 99.93 True relocation, scaffold gap is present, inconsistency = 20551632 50717840 50728034 534231 523964 NC_000014.9 velvet.42927 99.77 True fake: scaffold gap size wrong estimation (local) 50715752 50716453 537257 536556 NC_000014.9 velvet.42927 97.29 True local misassembly 50714784 50715318 537949 537415 NC_000014.9 velvet.42927 99.81 True indel: indel (<= 5bp) 50712785 50714780 539945 537950 NC_000014.9 velvet.42927 98.95 True fake: scaffold gap size wrong estimation (local) 50711486 50712216 543711 542981 NC_000014.9 velvet.42927 98.63 True local misassembly 50710683 50711297 544326 543712 NC_000014.9 velvet.42927 99.84 True fake: scaffold gap size wrong estimation (local) 50709434 50710398 546132 545168 NC_000014.9 velvet.42927 99.69 True relocation, scaffold gap is present, inconsistency = -20587707 71293427 71294273 549846 549000 NC_000014.9 velvet.42927 99.88 True relocation, scaffold gap is present, inconsistency = 13516 71278619 71279406 551138 550351 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 71277401 71278336 552368 551445 NC_000014.9 velvet.42927 98.7 True fake: not a misassembly (possible transposable element) 71284904 71285749 563651 562806 NC_000014.9 velvet.42927 100.0 True fake: not a misassembly (possible transposable element) 71270405 71271784 565041 563662 NC_000014.9 velvet.42927 99.93 True fake: scaffold gap size wrong estimation (local) 71239906 71243173 595538 592271 NC_000014.9 velvet.42927 99.94 True fake: scaffold gap size wrong estimation (local) 71237545 71238315 598716 597946 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 71235811 71236945 601074 599940 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 71204020 71205938 628630 626712 NC_000014.9 velvet.42927 99.84 True fake: scaffold gap size wrong estimation (local) 71202487 71203727 631072 629832 NC_000014.9 velvet.42927 99.92 True relocation, scaffold gap is present, inconsistency = 10636638 60565291 60565838 631083 631630 NC_000014.9 velvet.42927 99.82 True fake: scaffold gap size wrong estimation (local) 60566437 60567397 632315 633283 NC_000014.9 velvet.42927 99.79 True fake: scaffold gap size wrong estimation (local) 60567610 60569314 634120 635824 NC_000014.9 velvet.42927 99.82 True fake: scaffold gap size wrong estimation (local) 60569959 60571724 637136 638853 NC_000014.9 velvet.42927 97.1 True fake: scaffold gap size wrong estimation (local) 60572008 60575447 639855 643295 NC_000014.9 velvet.42927 99.71 True fake: scaffold gap size wrong estimation (local) 60575561 60576711 643957 645142 NC_000014.9 velvet.42927 99.91 True fake: scaffold gap size wrong estimation (local) 60576964 60581212 645407 650386 NC_000014.9 velvet.42927 99.71 True fake: scaffold gap size wrong estimation (local) 60581401 60582356 651466 652421 NC_000014.9 velvet.42927 99.9 True fake: scaffold gap size wrong estimation (local) 60582643 60583221 652582 653157 NC_000014.9 velvet.42927 99.48 True fake: scaffold gap size wrong estimation (local) 60584724 60588836 655509 659626 NC_000014.9 velvet.42927 99.83 True fake: scaffold gap size wrong estimation (local) 60589103 60590020 660479 661558 NC_000014.9 velvet.42927 99.89 True fake: scaffold gap size wrong estimation (local) 60590719 60591745 662939 663965 NC_000014.9 velvet.42927 99.9 True fake: scaffold gap size wrong estimation (local) 60601945 60604559 669865 672520 NC_000014.9 velvet.42927 99.92 True fake: scaffold gap size wrong estimation (local) 60606112 60607333 674826 676045 NC_000014.9 velvet.42927 99.43 True fake: scaffold gap size wrong estimation (local) 60608501 60611477 677972 680982 NC_000014.9 velvet.42927 97.95 True fake: scaffold gap size wrong estimation (local) 60613269 60614678 683189 684598 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 60615697 60618806 686398 689505 NC_000014.9 velvet.42927 99.84 True fake: scaffold gap size wrong estimation (local) 60619001 60619724 690488 691211 NC_000014.9 velvet.42927 99.72 True fake: scaffold gap size wrong estimation (local) 60619880 60620448 691482 692050 NC_000014.9 velvet.42927 100.0 True inversion, scaffold gap is present 60620699 60624417 701253 697536 NC_000014.9 velvet.42927 99.84 True relocation, scaffold gap is present, inconsistency = 10915 60635343 60639213 701264 705133 NC_000014.9 velvet.42927 99.85 True fake: scaffold gap size wrong estimation (local) 60639342 60659993 706023 727738 NC_000014.9 velvet.42927 99.74 True fake: scaffold gap size wrong estimation (local) 60663821 60664459 733494 734132 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 60664745 60666517 734524 736294 NC_000014.9 velvet.42927 99.72 True fake: not a misassembly (possible transposable element) 21556187 21557053 736637 737503 NC_000014.9 velvet.42927 100.0 True fake: not a misassembly (possible transposable element) 60666820 60667377 737504 738058 NC_000014.9 velvet.42927 99.49 True fake: not a misassembly (possible transposable element) 21557200 21558095 739224 740119 NC_000014.9 velvet.42927 99.89 True fake: not a misassembly (possible transposable element) 60667681 60669897 740448 742682 NC_000014.9 velvet.42927 98.13 True relocation, scaffold gap is present, inconsistency = -39111938 21561062 21561816 745785 746539 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 21562058 21562658 746641 747241 NC_000014.9 velvet.42927 100.0 True relocation, scaffold gap is present, inconsistency = 9530000 31094144 31094744 749316 748727 NC_000014.9 velvet.42927 97.98 True fake: scaffold gap size wrong estimation (local) 31090259 31093447 754121 750836 NC_000014.9 velvet.42927 99.97 True fake: scaffold gap size wrong estimation (local) 31086690 31088535 758687 756726 NC_000014.9 velvet.42927 95.06 True fake: scaffold gap size wrong estimation (local) 31083625 31086409 762639 759530 NC_000014.9 velvet.42927 99.82 True fake: scaffold gap size wrong estimation (local) 31082885 31083491 763629 763023 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 31081967 31082607 765106 764466 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 31081051 31081877 766086 765260 NC_000014.9 velvet.42927 98.79 True local misassembly 31079785 31080933 767235 766087 NC_000014.9 velvet.42927 99.91 True fake: scaffold gap size wrong estimation (local) 31077976 31079557 769983 768402 NC_000014.9 velvet.42927 98.04 True local misassembly 31077211 31077723 770496 769984 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 31075996 31076928 772685 771753 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 31070220 31070787 774362 773795 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 31068140 31070044 776885 774981 NC_000014.9 velvet.42927 99.9 True fake: scaffold gap size wrong estimation (local) 31065922 31066951 779896 778867 NC_000014.9 velvet.42927 98.74 True local misassembly 31064919 31065674 780652 779897 NC_000014.9 velvet.42927 99.74 True relocation, scaffold gap is present, inconsistency = 82774 30981308 30981851 780946 781532 NC_000014.9 velvet.42927 99.81 True fake: scaffold gap size wrong estimation (local) 30985746 30987249 787059 788562 NC_000014.9 velvet.42927 99.8 True fake: scaffold gap size wrong estimation (local) 30987976 30989485 790181 791690 NC_000014.9 velvet.42927 100.0 True relocation, scaffold gap is present, inconsistency = 95936 31096084 31096702 802971 802353 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 31094992 31095801 804556 803750 NC_000014.9 velvet.42927 99.62 True fake: scaffold gap size wrong estimation (local) 31074827 31075726 827580 826681 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 31063415 31064270 832300 831445 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 31058734 31060888 837278 835175 NC_000014.9 velvet.42927 97.62 True fake: scaffold gap size wrong estimation (local) 31056976 31057608 839619 838987 NC_000014.9 velvet.42927 99.84 True fake: scaffold gap size wrong estimation (local) 31054872 31055818 842172 841224 NC_000014.9 velvet.42927 99.79 True fake: scaffold gap size wrong estimation (local) 31053212 31054410 844473 843229 NC_000014.9 velvet.42927 100.0 True relocation, scaffold gap is present, inconsistency = 39638078 70693101 70695135 845086 847120 NC_000014.9 velvet.42927 99.95 True relocation, scaffold gap is present, inconsistency = 12992350 57698912 57700421 848970 847450 NC_000014.9 velvet.42927 98.82 True relocation, scaffold gap is present, inconsistency = 26652640 31033474 31034480 861768 860762 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 31031222 31031951 864930 864201 NC_000014.9 velvet.42927 99.86 True fake: scaffold gap size wrong estimation (local) 31028773 31029612 868437 867598 NC_000014.9 velvet.42927 99.76 True relocation, scaffold gap is present, inconsistency = -24985 31050330 31051023 871864 871172 NC_000014.9 velvet.42927 99.86 True fake: scaffold gap size wrong estimation (local) 31046832 31047374 877585 877043 NC_000014.9 velvet.42927 98.16 True fake: scaffold gap size wrong estimation (local) 31045178 31045946 878723 877955 NC_000014.9 velvet.42927 99.74 True fake: scaffold gap size wrong estimation (local) 31043215 31044429 881849 880635 NC_000014.9 velvet.42927 99.18 True local misassembly 31042104 31043022 882768 881850 NC_000014.9 velvet.42927 99.78 True fake: scaffold gap size wrong estimation (local) 31040306 31040881 885377 884802 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 31037712 31039191 888974 887425 NC_000014.9 velvet.42927 97.72 True fake: scaffold gap size wrong estimation (extensive) 31023833 31027116 895534 892251 NC_000014.9 velvet.42927 99.91 True fake: not a misassembly (possible transposable element) 31020938 31022127 895546 896735 NC_000014.9 velvet.42927 99.66 True fake: not a misassembly (possible transposable element) 31006963 31007909 913683 912737 NC_000014.9 velvet.42927 99.68 True fake: scaffold gap size wrong estimation (local) 31005297 31005836 917396 916857 NC_000014.9 velvet.42927 100.0 True relocation, scaffold gap is present, inconsistency = 40120745 71130001 71130732 920816 921547 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 71130829 71131748 921683 922602 NC_000014.9 velvet.42927 99.89 True fake: scaffold gap size wrong estimation (local) 71132036 71139997 923679 931646 NC_000014.9 velvet.42927 99.89 True fake: scaffold gap size wrong estimation (local) 71140213 71141387 932587 933761 NC_000014.9 velvet.42927 99.74 True relocation, scaffold gap is present, inconsistency = 88553 71248528 71249115 952936 952349 NC_000014.9 velvet.42927 100.0 True local misassembly 71249927 71251196 954216 952947 NC_000014.9 velvet.42927 99.92 True relocation, scaffold gap is present, inconsistency = 80126 71162970 71167104 956913 961047 NC_000014.9 velvet.42927 99.73 True relocation, scaffold gap is present, inconsistency = 66553 71234141 71235068 962458 961531 NC_000014.9 velvet.42927 99.89 True fake: scaffold gap size wrong estimation (local) 71230550 71233793 966742 963412 NC_000014.9 velvet.42927 97.7 True relocation, scaffold gap is present, inconsistency = 56852 71168701 71170701 969739 971775 NC_000014.9 velvet.42927 99.85 True fake: scaffold gap size wrong estimation (local) 71171215 71173155 973043 975009 NC_000014.9 velvet.42927 98.27 True relocation, scaffold gap is present, inconsistency = 20307776 50858628 50863428 980435 975020 NC_000014.9 velvet.42927 99.75 True fake: scaffold gap size wrong estimation (local) 50856379 50858384 983237 981232 NC_000014.9 velvet.42927 100.0 True fake: scaffold gap size wrong estimation (local) 50855507 50856066 985129 984570 NC_000014.9 velvet.42927 99.82 True fake: scaffold gap size wrong estimation (local) 50853940 50855021 986821 985740 NC_000014.9 velvet.42927 100.0 True CONTIG velvet.42927 987927 misassembled 105647834 105648425 131 722 NC_000014.9 velvet.42928 98.31 True CONTIG velvet.42928 4115 correct CONTIG velvet.43006 254 unaligned CONTIG velvet.43010 206 unaligned 37777794 37779370 19925 21501 NC_000014.9 velvet.43035 99.24 True indel: indel (<= 5bp) 37779371 37780490 21503 22622 NC_000014.9 velvet.43035 99.91 True CONTIG velvet.43035 24749 correct CONTIG velvet.43070 231 unaligned 43347462 43351420 2946 6903 NC_000014.9 velvet.43118 99.87 True fake: scaffold gap size wrong estimation (local) 43351741 43353911 8092 10262 NC_000014.9 velvet.43118 100.0 True fake: scaffold gap size wrong estimation (local) 43354088 43363650 11260 20822 NC_000014.9 velvet.43118 100.0 True fake: scaffold gap size wrong estimation (local) 43363746 43366602 21493 24631 NC_000014.9 velvet.43118 99.93 True fake: scaffold gap size wrong estimation (local) 43366837 43368123 25239 26525 NC_000014.9 velvet.43118 100.0 True fake: scaffold gap size wrong estimation (local) 43368354 43370299 27377 29394 NC_000014.9 velvet.43118 99.95 True fake: scaffold gap size wrong estimation (local) 43376314 43389200 31297 45766 NC_000014.9 velvet.43118 99.32 True fake: scaffold gap size wrong estimation (local) 43389490 43390066 46357 46933 NC_000014.9 velvet.43118 100.0 True fake: scaffold gap size wrong estimation (local) 43390639 43391294 47852 48507 NC_000014.9 velvet.43118 98.48 True fake: scaffold gap size wrong estimation (local) 43392893 43398449 50880 56527 NC_000014.9 velvet.43118 99.21 True fake: scaffold gap size wrong estimation (local) 43398755 43405518 57554 64397 NC_000014.9 velvet.43118 99.94 True fake: scaffold gap size wrong estimation (local) 43406391 43410503 66047 70163 NC_000014.9 velvet.43118 99.78 True fake: scaffold gap size wrong estimation (local) 43410612 43420903 71051 81395 NC_000014.9 velvet.43118 99.74 True fake: scaffold gap size wrong estimation (local) 43420998 43422859 82347 84208 NC_000014.9 velvet.43118 100.0 True CONTIG velvet.43118 107070 correct 106055266 106055776 1 510 NC_000014.9 velvet.43133 99.22 True CONTIG velvet.43133 510 correct 24600968 24601665 3262 3959 NC_000014.9 velvet.43148 100.0 True CONTIG velvet.43148 3959 correct CONTIG velvet.43159 386 unaligned CONTIG velvet.43204 432 unaligned 54587943 54588446 504 1 NC_000014.9 velvet.43222 99.6 True CONTIG velvet.43222 504 correct CONTIG velvet.43251 311 unaligned CONTIG velvet.43256 305 unaligned CONTIG velvet.43259 200 unaligned 65445147 65446690 1 1544 NC_000014.9 velvet.43280 100.0 True fake: scaffold gap size wrong estimation (local) 65446898 65450880 2384 6366 NC_000014.9 velvet.43280 100.0 True fake: scaffold gap size wrong estimation (local) 65451152 65453154 7456 9458 NC_000014.9 velvet.43280 99.95 True fake: scaffold gap size wrong estimation (local) 65463557 65464259 17513 18215 NC_000014.9 velvet.43280 100.0 True indel: indel (<= 5bp) 65464261 65465447 18216 19402 NC_000014.9 velvet.43280 99.92 True indel: indel (<= 5bp) 65465449 65466505 19403 20459 NC_000014.9 velvet.43280 100.0 True local misassembly 65469568 65471149 20460 22041 NC_000014.9 velvet.43280 99.37 True indel: indel (> 5bp) 65471150 65471752 22083 22685 NC_000014.9 velvet.43280 100.0 True fake: scaffold gap size wrong estimation (local) 65471753 65474043 22856 25146 NC_000014.9 velvet.43280 99.17 True fake: scaffold gap size wrong estimation (local) 65474611 65480320 26497 32382 NC_000014.9 velvet.43280 99.89 True fake: scaffold gap size wrong estimation (local) 65480974 65483906 33966 36891 NC_000014.9 velvet.43280 99.76 True fake: scaffold gap size wrong estimation (local) 65484034 65484553 37447 37966 NC_000014.9 velvet.43280 100.0 True fake: scaffold gap size wrong estimation (local) 65484664 65487307 38396 41074 NC_000014.9 velvet.43280 100.0 True fake: scaffold gap size wrong estimation (local) 65520082 65522646 71307 73864 NC_000014.9 velvet.43280 99.73 True CONTIG velvet.43280 76669 correct CONTIG velvet.43313 330 unaligned CONTIG velvet.43386 303 unaligned 82224564 82231461 6899 1 NC_000014.9 velvet.43389 99.93 True fake: scaffold gap size wrong estimation (local) 82192547 82194574 35352 33288 NC_000014.9 velvet.43389 99.85 True fake: scaffold gap size wrong estimation (local) 82188675 82192449 40046 36272 NC_000014.9 velvet.43389 99.87 True fake: scaffold gap size wrong estimation (local) 82187800 82188398 41666 41068 NC_000014.9 velvet.43389 98.33 True indel: indel (> 5bp) 82186254 82187561 43214 41920 NC_000014.9 velvet.43389 99.0 True relocation, scaffold gap is present, inconsistency = -38081 82221213 82224324 46336 43225 NC_000014.9 velvet.43389 99.94 True local misassembly 82219199 82221109 48410 46534 NC_000014.9 velvet.43389 98.21 True fake: scaffold gap size wrong estimation (local) 82215202 82218975 53081 49307 NC_000014.9 velvet.43389 99.89 True fake: scaffold gap size wrong estimation (local) 82209133 82214904 60106 54149 NC_000014.9 velvet.43389 99.93 True fake: scaffold gap size wrong estimation (local) 82176260 82185633 93439 83632 NC_000014.9 velvet.43389 98.48 True fake: scaffold gap size wrong estimation (local) 82168810 82176144 101550 94036 NC_000014.9 velvet.43389 99.89 True fake: scaffold gap size wrong estimation (local) 82163919 82168574 107172 102517 NC_000014.9 velvet.43389 99.89 True fake: scaffold gap size wrong estimation (local) 82154800 82160657 113041 107183 NC_000014.9 velvet.43389 99.93 True fake: scaffold gap size wrong estimation (local) 82148160 82154695 120519 113656 NC_000014.9 velvet.43389 95.09 True fake: scaffold gap size wrong estimation (local) 82143751 82147522 125831 122060 NC_000014.9 velvet.43389 99.92 True fake: scaffold gap size wrong estimation (local) 82140480 82141717 130122 128877 NC_000014.9 velvet.43389 99.84 True fake: scaffold gap size wrong estimation (local) 82135172 82137555 133504 131121 NC_000014.9 velvet.43389 99.87 True relocation, scaffold gap is present, inconsistency = -27879 82160909 82163040 135646 133515 NC_000014.9 velvet.43389 99.91 True fake: scaffold gap size wrong estimation (local) 82130318 82134884 162294 157728 NC_000014.9 velvet.43389 99.93 True fake: scaffold gap size wrong estimation (local) 82107523 82130198 187581 163223 NC_000014.9 velvet.43389 99.82 True fake: scaffold gap size wrong estimation (local) 82083026 82088384 206802 201332 NC_000014.9 velvet.43389 99.96 True fake: scaffold gap size wrong estimation (local) 82076923 82078729 208619 206813 NC_000014.9 velvet.43389 99.89 True relocation, scaffold gap is present, inconsistency = 5755107 76317363 76321805 208630 213072 NC_000014.9 velvet.43389 99.8 True fake: scaffold gap size wrong estimation (local) 76321917 76323320 213925 215328 NC_000014.9 velvet.43389 99.79 True relocation, scaffold gap is present, inconsistency = 5748028 82071359 82076903 220883 215339 NC_000014.9 velvet.43389 99.87 True fake: scaffold gap size wrong estimation (local) 82069600 82071271 223351 221680 NC_000014.9 velvet.43389 99.94 True fake: scaffold gap size wrong estimation (local) 82065052 82068683 228814 224882 NC_000014.9 velvet.43389 99.25 True fake: scaffold gap size wrong estimation (local) 82063286 82064312 231234 230211 NC_000014.9 velvet.43389 97.76 True fake: scaffold gap size wrong estimation (local) 82062168 82062718 232158 231608 NC_000014.9 velvet.43389 97.1 True fake: scaffold gap size wrong estimation (local) 82054894 82060908 240071 234053 NC_000014.9 velvet.43389 99.87 True fake: scaffold gap size wrong estimation (local) 82041435 82054606 254414 241193 NC_000014.9 velvet.43389 99.67 True fake: scaffold gap size wrong estimation (local) 82038273 82041206 258364 255431 NC_000014.9 velvet.43389 99.76 True fake: scaffold gap size wrong estimation (local) 82036987 82037941 260259 259279 NC_000014.9 velvet.43389 96.74 True relocation, scaffold gap is present, inconsistency = 2672604 79362274 79363048 262368 261594 NC_000014.9 velvet.43389 98.71 True fake: scaffold gap size wrong estimation (local) 79360352 79361439 264490 263403 NC_000014.9 velvet.43389 97.52 True fake: scaffold gap size wrong estimation (local) 79358642 79359568 266276 265350 NC_000014.9 velvet.43389 99.78 True relocation, scaffold gap is present, inconsistency = -2674042 82030796 82032021 268164 266939 NC_000014.9 velvet.43389 99.92 True fake: scaffold gap size wrong estimation (local) 82025116 82026709 269779 268186 NC_000014.9 velvet.43389 99.94 True fake: scaffold gap size wrong estimation (local) 82022119 82023609 273479 271998 NC_000014.9 velvet.43389 99.26 True fake: scaffold gap size wrong estimation (local) 81998901 82000987 296996 294956 NC_000014.9 velvet.43389 97.74 True fake: scaffold gap size wrong estimation (local) 81995527 81998669 301262 298120 NC_000014.9 velvet.43389 99.94 True relocation, scaffold gap is present, inconsistency = 89761 82089563 82096610 302395 309631 NC_000014.9 velvet.43389 99.83 True fake: scaffold gap size wrong estimation (local) 82096842 82105712 310590 319461 NC_000014.9 velvet.43389 99.85 True fake: scaffold gap size wrong estimation (local) 82105993 82107538 320487 322032 NC_000014.9 velvet.43389 99.94 True relocation, scaffold gap is present, inconsistency = -28767 82078782 82079390 322043 322651 NC_000014.9 velvet.43389 99.84 True fake: scaffold gap size wrong estimation (local) 82079791 82082735 323843 326787 NC_000014.9 velvet.43389 99.86 True relocation, scaffold gap is present, inconsistency = 2748862 79323842 79329827 333873 327889 NC_000014.9 velvet.43389 99.93 True fake: scaffold gap size wrong estimation (local) 79317193 79323575 341843 334944 NC_000014.9 velvet.43389 99.91 True fake: scaffold gap size wrong estimation (local) 79290664 79291582 363395 362478 NC_000014.9 velvet.43389 99.89 True relocation, scaffold gap is present, inconsistency = -11826 79291662 79302478 374219 363407 NC_000014.9 velvet.43389 99.95 True relocation, scaffold gap is present, inconsistency = 55005926 24283485 24285725 376470 374230 NC_000014.9 velvet.43389 99.96 True relocation, scaffold gap is present, inconsistency = -4624667 28897579 28907100 387137 377522 NC_000014.9 velvet.43389 99.47 True relocation, scaffold gap is present, inconsistency = 35740273 64647535 64648038 387299 387802 NC_000014.9 velvet.43389 100.0 True fake: scaffold gap size wrong estimation (local) 64648469 64649154 387894 388579 NC_000014.9 velvet.43389 98.54 True fake: scaffold gap size wrong estimation (local) 64649440 64650530 389933 391023 NC_000014.9 velvet.43389 99.91 True local misassembly 64650799 64651536 391024 391761 NC_000014.9 velvet.43389 98.64 True fake: scaffold gap size wrong estimation (local) 64651988 64653262 393210 394484 NC_000014.9 velvet.43389 99.76 True relocation, scaffold gap is present, inconsistency = 10547189 75200462 75201752 394495 395785 NC_000014.9 velvet.43389 100.0 True fake: scaffold gap size wrong estimation (local) 75202321 75203062 396439 397180 NC_000014.9 velvet.43389 98.65 True relocation, scaffold gap is present, inconsistency = 22098060 97306151 97309210 402209 405268 NC_000014.9 velvet.43389 99.9 True fake: scaffold gap size wrong estimation (local) 97312291 97319871 407054 414756 NC_000014.9 velvet.43389 98.96 True fake: scaffold gap size wrong estimation (local) 97324647 97326770 414767 416890 NC_000014.9 velvet.43389 100.0 True local misassembly 97319985 97320858 416901 417774 NC_000014.9 velvet.43389 99.43 True relocation, scaffold gap is present, inconsistency = 88974 97219909 97220645 428876 428140 NC_000014.9 velvet.43389 100.0 True relocation, scaffold gap is present, inconsistency = 7751542 89465535 89467533 431708 429710 NC_000014.9 velvet.43389 99.9 True fake: scaffold gap size wrong estimation (local) 89463274 89463774 434673 434173 NC_000014.9 velvet.43389 100.0 True relocation, scaffold gap is present, inconsistency = 87049 89374973 89375795 435103 435925 NC_000014.9 velvet.43389 95.38 True local misassembly 89376075 89376769 435926 436620 NC_000014.9 velvet.43389 98.56 True fake: scaffold gap size wrong estimation (local) 89377062 89378723 437703 439364 NC_000014.9 velvet.43389 99.88 True fake: scaffold gap size wrong estimation (local) 89378971 89379709 440058 440796 NC_000014.9 velvet.43389 100.0 True fake: scaffold gap size wrong estimation (local) 89379932 89380983 441149 442175 NC_000014.9 velvet.43389 97.41 True fake: scaffold gap size wrong estimation (local) 89381174 89383054 443229 445051 NC_000014.9 velvet.43389 96.69 True fake: scaffold gap size wrong estimation (local) 89411920 89412780 468786 469646 NC_000014.9 velvet.43389 100.0 True indel: indel (> 5bp) 89412799 89413380 469647 470228 NC_000014.9 velvet.43389 98.28 True fake: scaffold gap size wrong estimation (local) 89414846 89415624 472696 473474 NC_000014.9 velvet.43389 98.59 True relocation, scaffold gap is present, inconsistency = 21166 89437828 89438748 475432 474512 NC_000014.9 velvet.43389 99.89 True fake: scaffold gap size wrong estimation (local) 89437172 89437673 480237 479736 NC_000014.9 velvet.43389 99.6 True relocation, scaffold gap is present, inconsistency = 7896156 97333840 97352375 480248 498790 NC_000014.9 velvet.43389 99.93 True fake: scaffold gap size wrong estimation (local) 97352899 97355887 500120 503111 NC_000014.9 velvet.43389 99.77 True fake: scaffold gap size wrong estimation (local) 97356170 97359910 504149 507862 NC_000014.9 velvet.43389 99.01 True fake: scaffold gap size wrong estimation (local) 97360573 97368530 509239 518483 NC_000014.9 velvet.43389 99.62 True fake: scaffold gap size wrong estimation (local) 97368847 97369380 519828 520361 NC_000014.9 velvet.43389 100.0 True fake: scaffold gap size wrong estimation (local) 97395948 97396453 541487 541992 NC_000014.9 velvet.43389 100.0 True local misassembly 97394694 97395697 542003 543006 NC_000014.9 velvet.43389 100.0 True fake: scaffold gap size wrong estimation (local) 97396465 97403332 543998 550879 NC_000014.9 velvet.43389 99.87 True fake: scaffold gap size wrong estimation (local) 97403350 97405152 551660 553462 NC_000014.9 velvet.43389 100.0 True fake: scaffold gap size wrong estimation (local) 97405429 97406178 553986 554735 NC_000014.9 velvet.43389 100.0 True fake: scaffold gap size wrong estimation (local) 97406457 97418747 555503 568718 NC_000014.9 velvet.43389 99.95 True fake: scaffold gap size wrong estimation (local) 97419819 97423535 570425 574141 NC_000014.9 velvet.43389 100.0 True fake: not a misassembly (possible transposable element) 89480435 89482373 574152 576091 NC_000014.9 velvet.43389 99.9 True fake: not a misassembly (possible transposable element) 97423829 97425942 576102 578215 NC_000014.9 velvet.43389 100.0 True fake: scaffold gap size wrong estimation (local) 97426038 97426573 578387 578922 NC_000014.9 velvet.43389 100.0 True fake: not a misassembly (possible transposable element) 89483711 89484884 579420 580593 NC_000014.9 velvet.43389 100.0 True fake: not a misassembly (possible transposable element) 97426783 97431686 581094 586001 NC_000014.9 velvet.43389 99.96 True fake: scaffold gap size wrong estimation (local) 97432464 97433613 587595 588744 NC_000014.9 velvet.43389 99.83 True fake: scaffold gap size wrong estimation (local) 97437632 97439061 589096 590525 NC_000014.9 velvet.43389 100.0 True local misassembly 97434263 97437495 590536 593754 NC_000014.9 velvet.43389 99.41 True fake: scaffold gap size wrong estimation (local) 97439277 97440906 595966 597595 NC_000014.9 velvet.43389 99.88 True fake: scaffold gap size wrong estimation (local) 97443160 97448411 597809 603050 NC_000014.9 velvet.43389 99.71 True fake: scaffold gap size wrong estimation (local) 97467225 97470039 622426 625358 NC_000014.9 velvet.43389 99.86 True fake: scaffold gap size wrong estimation (local) 97473096 97487771 626162 642151 NC_000014.9 velvet.43389 99.88 True fake: scaffold gap size wrong estimation (local) 97488062 97496172 643237 651423 NC_000014.9 velvet.43389 99.51 True relocation, scaffold gap is present, inconsistency = -7974133 89522050 89523799 651434 653183 NC_000014.9 velvet.43389 99.83 True fake: scaffold gap size wrong estimation (local) 89524417 89527719 654358 658028 NC_000014.9 velvet.43389 99.85 True fake: scaffold gap size wrong estimation (local) 89528694 89529934 659876 661116 NC_000014.9 velvet.43389 99.92 True fake: scaffold gap size wrong estimation (local) 89531101 89531830 662952 663681 NC_000014.9 velvet.43389 100.0 True fake: scaffold gap size wrong estimation (local) 89531978 89533399 664068 665489 NC_000014.9 velvet.43389 100.0 True relocation, scaffold gap is present, inconsistency = 7962306 97496152 97504615 674399 665936 NC_000014.9 velvet.43389 99.95 True relocation, scaffold gap is present, inconsistency = 11138 97515764 97523286 674410 682180 NC_000014.9 velvet.43389 99.99 True fake: scaffold gap size wrong estimation (local) 97523575 97531122 683245 690792 NC_000014.9 velvet.43389 99.96 True fake: scaffold gap size wrong estimation (extensive) 97539307 97544066 690803 695552 NC_000014.9 velvet.43389 99.71 True relocation, scaffold gap is present, inconsistency = -12688 97531389 97539177 695563 703333 NC_000014.9 velvet.43389 99.77 True fake: not a misassembly (possible transposable element) 53717519 53722856 703344 708671 NC_000014.9 velvet.43389 99.64 True fake: not a misassembly (possible transposable element) 97545526 97546221 712597 713290 NC_000014.9 velvet.43389 99.71 True local misassembly 97544394 97545520 715745 716871 NC_000014.9 velvet.43389 100.0 True relocation, scaffold gap is present, inconsistency = -43818182 53728733 53729850 718266 719382 NC_000014.9 velvet.43389 99.73 True relocation, scaffold gap is present, inconsistency = 22519565 76249426 76254523 719393 724491 NC_000014.9 velvet.43389 99.94 True fake: not a misassembly (possible transposable element) 75283056 75283933 728689 729566 NC_000014.9 velvet.43389 99.67 True fake: not a misassembly (possible transposable element) 76260745 76265893 729567 734756 NC_000014.9 velvet.43389 99.92 True relocation, scaffold gap is present, inconsistency = -22541309 53724595 53725168 734767 735340 NC_000014.9 velvet.43389 99.83 True fake: scaffold gap size wrong estimation (local) 53727714 53728449 738631 739366 NC_000014.9 velvet.43389 98.64 True local misassembly 53726338 53727180 741028 741870 NC_000014.9 velvet.43389 99.88 True fake: scaffold gap size wrong estimation (local) 53730005 53730781 741881 742657 NC_000014.9 velvet.43389 100.0 True fake: scaffold gap size wrong estimation (local) 53732689 53737410 745282 750038 NC_000014.9 velvet.43389 99.1 True relocation, scaffold gap is present, inconsistency = -28620670 25116751 25123446 750049 756742 NC_000014.9 velvet.43389 99.93 True fake: not a misassembly (possible transposable element) 76275482 76276448 756753 757719 NC_000014.9 velvet.43389 100.0 True fake: not a misassembly (possible transposable element) 25123565 25124909 757730 759113 NC_000014.9 velvet.43389 99.92 True fake: scaffold gap size wrong estimation (local) 25151978 25158081 783944 790047 NC_000014.9 velvet.43389 99.85 True relocation, scaffold gap is present, inconsistency = 50127071 75285321 75286175 790216 791070 NC_000014.9 velvet.43389 100.0 True fake: scaffold gap size wrong estimation (local) 75287037 75288026 792894 793883 NC_000014.9 velvet.43389 98.99 True fake: scaffold gap size wrong estimation (local) 75289508 75293092 796197 799781 NC_000014.9 velvet.43389 100.0 True fake: scaffold gap size wrong estimation (local) 75317166 75317958 821281 822073 NC_000014.9 velvet.43389 99.5 True local misassembly 75318061 75318791 822074 822804 NC_000014.9 velvet.43389 98.5 True indel: indel (> 5bp) 75318792 75319312 822813 823333 NC_000014.9 velvet.43389 100.0 True fake: scaffold gap size wrong estimation (local) 75321845 75324343 826355 828853 NC_000014.9 velvet.43389 99.6 True fake: scaffold gap size wrong estimation (local) 75324585 75325820 829876 831111 NC_000014.9 velvet.43389 100.0 True fake: scaffold gap size wrong estimation (local) 75326596 75327579 832119 833102 NC_000014.9 velvet.43389 99.9 True relocation, scaffold gap is present, inconsistency = -13024 75315074 75315648 833621 834195 NC_000014.9 velvet.43389 99.83 True fake: scaffold gap size wrong estimation (extensive) 75346357 75348916 856796 859347 NC_000014.9 velvet.43389 99.57 True relocation, scaffold gap is present, inconsistency = 21784491 97133418 97135234 861174 859358 NC_000014.9 velvet.43389 99.89 True fake: scaffold gap size wrong estimation (local) 97105766 97107409 891212 889569 NC_000014.9 velvet.43389 100.0 True fake: scaffold gap size wrong estimation (local) 97096656 97099343 894419 891732 NC_000014.9 velvet.43389 99.63 True local misassembly 97091911 97093369 895878 894420 NC_000014.9 velvet.43389 100.0 True fake: scaffold gap size wrong estimation (local) 97090933 97091639 896773 896067 NC_000014.9 velvet.43389 100.0 True relocation, scaffold gap is present, inconsistency = 44062 97136517 97140768 897589 901840 NC_000014.9 velvet.43389 100.0 True fake: scaffold gap size wrong estimation (local) 97141033 97142456 902735 904157 NC_000014.9 velvet.43389 99.86 True fake: scaffold gap size wrong estimation (local) 97142598 97146472 904802 908676 NC_000014.9 velvet.43389 99.9 True fake: scaffold gap size wrong estimation (local) 97146770 97148228 909629 911082 NC_000014.9 velvet.43389 99.59 True relocation, scaffold gap is present, inconsistency = 706307 96437122 96439397 914423 912148 NC_000014.9 velvet.43389 99.96 True fake: scaffold gap size wrong estimation (local) 96427234 96427980 920035 919289 NC_000014.9 velvet.43389 100.0 True fake: scaffold gap size wrong estimation (local) 96425748 96426925 921516 920334 NC_000014.9 velvet.43389 100.0 True fake: scaffold gap size wrong estimation (local) 96422669 96425476 925380 922573 NC_000014.9 velvet.43389 99.93 True fake: scaffold gap size wrong estimation (local) 96421875 96422515 927074 926434 NC_000014.9 velvet.43389 99.69 True fake: scaffold gap size wrong estimation (local) 96420430 96421592 928471 927311 NC_000014.9 velvet.43389 99.66 True fake: scaffold gap size wrong estimation (local) 96418770 96419583 930867 930054 NC_000014.9 velvet.43389 98.65 True fake: scaffold gap size wrong estimation (local) 96416388 96418108 933798 932078 NC_000014.9 velvet.43389 96.69 True fake: scaffold gap size wrong estimation (local) 96415009 96416096 936174 934345 NC_000014.9 velvet.43389 97.44 True fake: scaffold gap size wrong estimation (local) 96412837 96414749 938176 936264 NC_000014.9 velvet.43389 99.95 True fake: scaffold gap size wrong estimation (local) 96390768 96392669 961617 959716 NC_000014.9 velvet.43389 99.95 True fake: scaffold gap size wrong estimation (local) 96390016 96390535 963776 963257 NC_000014.9 velvet.43389 99.81 True relocation, scaffold gap is present, inconsistency = 757883 97148429 97153016 963787 968374 NC_000014.9 velvet.43389 99.87 True fake: scaffold gap size wrong estimation (local) 97168117 97187162 980202 999889 NC_000014.9 velvet.43389 99.2 True fake: scaffold gap size wrong estimation (local) 97215667 97218318 1028007 1030656 NC_000014.9 velvet.43389 99.89 True CONTIG velvet.43389 1030656 misassembled CONTIG velvet.43390 281 unaligned CONTIG velvet.43449 200 unaligned CONTIG velvet.43455 317 unaligned CONTIG velvet.43506 461 unaligned CONTIG velvet.43533 295 unaligned CONTIG velvet.43541 220 unaligned CONTIG velvet.43634 249 unaligned 21983748 21986230 2539 1 NC_000014.9 velvet.43644 99.59 True fake: scaffold gap size wrong estimation (local) 21976217 21978929 6010 3298 NC_000014.9 velvet.43644 99.78 True fake: scaffold gap size wrong estimation (local) 21975425 21976089 7629 6965 NC_000014.9 velvet.43644 100.0 True inversion, scaffold gap is present 21973027 21973920 9915 10808 NC_000014.9 velvet.43644 100.0 True CONTIG velvet.43644 13874 misassembled CONTIG velvet.43654 226 unaligned CONTIG velvet.43670 249 unaligned 81424501 81425373 1 873 NC_000014.9 velvet.43688 100.0 True CONTIG velvet.43688 33619 correct CONTIG velvet.43690 225 unaligned CONTIG velvet.43747 355 unaligned CONTIG velvet.43752 212 unaligned CONTIG velvet.43822 1458 unaligned 86102345 86103567 1 1223 NC_000014.9 velvet.43939 100.0 True fake: scaffold gap size wrong estimation (local) 86103568 86105422 1425 3279 NC_000014.9 velvet.43939 100.0 True CONTIG velvet.43939 4122 correct CONTIG velvet.43951 338 unaligned CONTIG velvet.43961 540 unaligned 50402964 50404044 1648 568 NC_000014.9 velvet.43969 100.0 True relocation, scaffold gap is present, inconsistency = -26120 50426729 50428275 4003 2457 NC_000014.9 velvet.43969 99.94 True fake: scaffold gap size wrong estimation (local) 50422099 50423606 5632 4125 NC_000014.9 velvet.43969 100.0 True fake: scaffold gap size wrong estimation (local) 50415685 50417297 9577 7965 NC_000014.9 velvet.43969 100.0 True fake: scaffold gap size wrong estimation (local) 50412987 50414041 13059 12005 NC_000014.9 velvet.43969 99.81 True fake: scaffold gap size wrong estimation (local) 50408950 50411863 17970 15052 NC_000014.9 velvet.43969 99.66 True fake: scaffold gap size wrong estimation (local) 50392466 50395531 40864 37799 NC_000014.9 velvet.43969 100.0 True CONTIG velvet.43969 47423 misassembled 104945445 104946069 3770 4394 NC_000014.9 velvet.43978 96.48 True CONTIG velvet.43978 7676 correct_unaligned CONTIG velvet.44010 332 unaligned CONTIG velvet.44032 205 unaligned 44088507 44090057 14671 13121 NC_000014.9 velvet.44056 99.81 True fake: not a misassembly (possible transposable element) 85395965 85397722 16758 18518 NC_000014.9 velvet.44056 99.55 True fake: not a misassembly (possible transposable element) 44084366 44086608 20837 18595 NC_000014.9 velvet.44056 99.82 True relocation, scaffold gap is present, inconsistency = 41311316 85397947 85399131 20860 22044 NC_000014.9 velvet.44056 99.41 True local misassembly 85399132 85403056 22136 26060 NC_000014.9 velvet.44056 99.69 True fake: scaffold gap size wrong estimation (local) 85403057 85406010 26136 29089 NC_000014.9 velvet.44056 99.42 True indel: indel (<= 5bp) 85406012 85410547 29090 33625 NC_000014.9 velvet.44056 99.74 True fake: scaffold gap size wrong estimation (local) 85410548 85412483 35216 37151 NC_000014.9 velvet.44056 99.33 True fake: scaffold gap size wrong estimation (local) 85412594 85422078 37516 48437 NC_000014.9 velvet.44056 99.34 True fake: scaffold gap size wrong estimation (local) 85428611 85430478 48448 50292 NC_000014.9 velvet.44056 98.71 True relocation, scaffold gap is present, inconsistency = -8389 85422100 85424459 50303 52662 NC_000014.9 velvet.44056 99.92 True fake: scaffold gap size wrong estimation (local) 85424689 85427403 53709 56423 NC_000014.9 velvet.44056 99.93 True fake: scaffold gap size wrong estimation (local) 85427555 85428567 57363 58375 NC_000014.9 velvet.44056 99.9 True fake: scaffold gap size wrong estimation (local) 85435390 85436192 61669 62471 NC_000014.9 velvet.44056 99.75 True fake: not a misassembly (possible transposable element) 32227885 32228592 62482 63189 NC_000014.9 velvet.44056 100.0 True fake: not a misassembly (possible transposable element) 85453463 85455193 86715 88445 NC_000014.9 velvet.44056 100.0 True relocation, scaffold gap is present, inconsistency = -8970 85446234 85447034 88456 89256 NC_000014.9 velvet.44056 100.0 True relocation, inconsistency = 51109332 34335976 34336901 90182 89257 NC_000014.9 velvet.44056 100.0 True relocation, scaffold gap is present, inconsistency = 2075485 32258312 32260480 90193 92361 NC_000014.9 velvet.44056 100.0 True relocation, scaffold gap is present, inconsistency = 53186198 85447072 85449859 92755 95542 NC_000014.9 velvet.44056 99.96 True fake: scaffold gap size wrong estimation (local) 85450811 85453205 97246 99640 NC_000014.9 velvet.44056 100.0 True fake: scaffold gap size wrong estimation (local) 85455225 85460001 102264 107825 NC_000014.9 velvet.44056 99.85 True relocation, scaffold gap is present, inconsistency = -23986 85436514 85439212 108324 110968 NC_000014.9 velvet.44056 98.0 True local misassembly 85434002 85435095 110979 112072 NC_000014.9 velvet.44056 100.0 True fake: scaffold gap size wrong estimation (local) 85439410 85441015 112083 113688 NC_000014.9 velvet.44056 100.0 True fake: scaffold gap size wrong estimation (local) 85441318 85442752 114486 115920 NC_000014.9 velvet.44056 100.0 True fake: scaffold gap size wrong estimation (local) 85442879 85445948 116669 119824 NC_000014.9 velvet.44056 97.02 True fake: not a misassembly (possible transposable element) 32257343 32258041 119825 120523 NC_000014.9 velvet.44056 100.0 True fake: not a misassembly (possible transposable element) 85460273 85470816 132246 143491 NC_000014.9 velvet.44056 99.64 True fake: scaffold gap size wrong estimation (local) 85471018 85476188 144008 149618 NC_000014.9 velvet.44056 99.57 True fake: scaffold gap size wrong estimation (local) 85476459 85478399 150560 152500 NC_000014.9 velvet.44056 99.95 True fake: scaffold gap size wrong estimation (local) 85478508 85484383 153313 159188 NC_000014.9 velvet.44056 99.9 True fake: scaffold gap size wrong estimation (local) 85486026 85487767 161288 163144 NC_000014.9 velvet.44056 99.94 True fake: scaffold gap size wrong estimation (local) 85491885 85492624 163155 163894 NC_000014.9 velvet.44056 100.0 True fake: scaffold gap size wrong estimation (local) 85492842 85494568 164277 166003 NC_000014.9 velvet.44056 100.0 True fake: scaffold gap size wrong estimation (local) 85495102 85495913 167020 167831 NC_000014.9 velvet.44056 100.0 True fake: scaffold gap size wrong estimation (local) 85496177 85503779 168518 176686 NC_000014.9 velvet.44056 99.89 True fake: scaffold gap size wrong estimation (local) 85504488 85506108 177704 179324 NC_000014.9 velvet.44056 99.38 True CONTIG velvet.44056 179324 misassembled CONTIG velvet.44064 201 unaligned CONTIG velvet.44133 221 unaligned CONTIG velvet.44156 375 unaligned CONTIG velvet.44198 238 unaligned CONTIG velvet.44221 255 unaligned CONTIG velvet.44235 234 unaligned CONTIG velvet.44246 238 unaligned CONTIG velvet.44257 365 unaligned CONTIG velvet.44274 267 unaligned CONTIG velvet.44285 330 unaligned 57378362 57379480 1 1123 NC_000014.9 velvet.44312 99.64 True CONTIG velvet.44312 1123 correct CONTIG velvet.44333 287 unaligned CONTIG velvet.44355 463 unaligned CONTIG velvet.44374 282 unaligned 102995438 102996097 660 1 NC_000014.9 velvet.44388 99.7 True fake: scaffold gap size wrong estimation (local) 102994371 102995159 2547 1759 NC_000014.9 velvet.44388 100.0 True CONTIG velvet.44388 2547 correct CONTIG velvet.44413 245 unaligned CONTIG velvet.44485 244 unaligned CONTIG velvet.44490 36794 unaligned CONTIG velvet.44499 33129 unaligned CONTIG velvet.44518 211 unaligned CONTIG velvet.44541 347 unaligned 75030116 75032875 2994 1 NC_000014.9 velvet.44568 98.83 True fake: scaffold gap size wrong estimation (extensive) 74998631 74999642 25693 24682 NC_000014.9 velvet.44568 99.01 True local misassembly 74997756 74998321 26259 25694 NC_000014.9 velvet.44568 100.0 True fake: scaffold gap size wrong estimation (local) 74993275 74993978 32473 31770 NC_000014.9 velvet.44568 96.02 True fake: scaffold gap size wrong estimation (local) 74992455 74993274 33350 32531 NC_000014.9 velvet.44568 100.0 True fake: scaffold gap size wrong estimation (local) 74991698 74992235 34122 33585 NC_000014.9 velvet.44568 100.0 True fake: scaffold gap size wrong estimation (local) 74957584 74958211 63092 62466 NC_000014.9 velvet.44568 99.36 True fake: scaffold gap size wrong estimation (local) 74945191 74957399 75724 63516 NC_000014.9 velvet.44568 99.93 True fake: scaffold gap size wrong estimation (local) 74922041 74923758 99782 98065 NC_000014.9 velvet.44568 99.88 True local misassembly 74926971 74928051 100873 99793 NC_000014.9 velvet.44568 99.91 True relocation, scaffold gap is present, inconsistency = -10328 74933443 74935810 104729 102362 NC_000014.9 velvet.44568 99.92 True CONTIG velvet.44568 104729 misassembled CONTIG velvet.44579 202 unaligned CONTIG velvet.44613 221 unaligned CONTIG velvet.44636 254 unaligned CONTIG velvet.44655 4015 unaligned 40986254 40991195 8547 2738 NC_000014.9 velvet.44686 99.18 True CONTIG velvet.44686 8547 correct CONTIG velvet.44704 230 unaligned 64263539 64264660 1 1169 NC_000014.9 velvet.44720 95.31 True CONTIG velvet.44720 5674 correct_unaligned CONTIG velvet.44735 255 unaligned CONTIG velvet.44737 317 unaligned CONTIG velvet.44766 552 unaligned CONTIG velvet.44797 205 unaligned CONTIG velvet.44826 251 unaligned 101934653 101935897 1534 2778 NC_000014.9 velvet.44835 100.0 True fake: scaffold gap size wrong estimation (local) 101937951 101939344 4413 5806 NC_000014.9 velvet.44835 99.5 True CONTIG velvet.44835 8763 correct 62490070 62494396 4418 1 NC_000014.9 velvet.44889 98.83 True fake: scaffold gap size wrong estimation (local) 62483235 62489006 11952 6185 NC_000014.9 velvet.44889 99.86 True relocation, scaffold gap is present, inconsistency = 7776188 70265581 70266187 12339 12945 NC_000014.9 velvet.44889 100.0 True fake: scaffold gap size wrong estimation (local) 70266253 70267343 13212 14302 NC_000014.9 velvet.44889 99.82 True fake: scaffold gap size wrong estimation (local) 70267606 70269348 15644 17386 NC_000014.9 velvet.44889 99.94 True fake: scaffold gap size wrong estimation (local) 70298672 70300271 48816 50414 NC_000014.9 velvet.44889 99.38 True CONTIG velvet.44889 57376 misassembled 59221450 59225041 3592 1 NC_000014.9 velvet.44913 99.92 True relocation, scaffold gap is present, inconsistency = 30009597 89234649 89236259 3603 5213 NC_000014.9 velvet.44913 100.0 True fake: scaffold gap size wrong estimation (local) 89236540 89246560 6325 16399 NC_000014.9 velvet.44913 99.84 True relocation, scaffold gap is present, inconsistency = -55153649 34092929 34094842 16417 18330 NC_000014.9 velvet.44913 100.0 True fake: scaffold gap size wrong estimation (local) 34095152 34108325 19379 32674 NC_000014.9 velvet.44913 99.89 True relocation, scaffold gap is present, inconsistency = 25078848 59187320 59192770 38325 32821 NC_000014.9 velvet.44913 99.96 True relocation, scaffold gap is present, inconsistency = 30071557 89264338 89272609 38336 46306 NC_000014.9 velvet.44913 96.24 True fake: scaffold gap size wrong estimation (local) 89272768 89276042 47295 50569 NC_000014.9 velvet.44913 99.91 True relocation, scaffold gap is present, inconsistency = -30147587 59128466 59129947 50580 52061 NC_000014.9 velvet.44913 99.87 True fake: scaffold gap size wrong estimation (local) 59130230 59136550 53028 59448 NC_000014.9 velvet.44913 99.9 True fake: scaffold gap size wrong estimation (local) 59136835 59137878 60283 61326 NC_000014.9 velvet.44913 100.0 True fake: scaffold gap size wrong estimation (local) 59168971 59170087 89344 90460 NC_000014.9 velvet.44913 99.91 True local misassembly 59170502 59171068 90461 91027 NC_000014.9 velvet.44913 98.24 True local misassembly 59171199 59173439 91028 93268 NC_000014.9 velvet.44913 95.72 True CONTIG velvet.44913 93268 misassembled CONTIG velvet.44933 1416 unaligned 51935797 51936528 1 732 NC_000014.9 velvet.44958 100.0 True CONTIG velvet.44958 883 correct CONTIG velvet.44981 230 unaligned CONTIG velvet.45069 393 unaligned 79645617 79648198 13 2594 NC_000014.9 velvet.45139 100.0 True fake: scaffold gap size wrong estimation (local) 79668960 79680461 21545 33046 NC_000014.9 velvet.45139 100.0 True indel: indel (<= 5bp) 79680462 79681756 33049 34343 NC_000014.9 velvet.45139 100.0 True relocation, scaffold gap is present, inconsistency = -13957 79681757 79686045 48301 52589 NC_000014.9 velvet.45139 99.56 True fake: scaffold gap size wrong estimation (local) 79686229 79707508 53613 75783 NC_000014.9 velvet.45139 99.76 True CONTIG velvet.45139 75783 misassembled CONTIG velvet.45151 253 unaligned 66586718 66587926 1 1201 NC_000014.9 velvet.45164 99.17 True CONTIG velvet.45164 8841 correct_unaligned CONTIG velvet.45202 491 unaligned CONTIG velvet.45238 461 unaligned CONTIG velvet.45282 279 unaligned CONTIG velvet.45319 243 unaligned 47383823 47386029 1040 3246 NC_000014.9 velvet.45332 99.68 True fake: scaffold gap size wrong estimation (local) 47386243 47396309 4246 15984 NC_000014.9 velvet.45332 99.76 True fake: scaffold gap size wrong estimation (local) 47397291 47399620 17625 19996 NC_000014.9 velvet.45332 97.81 True fake: scaffold gap size wrong estimation (local) 47412407 47418111 29914 35720 NC_000014.9 velvet.45332 99.34 True fake: scaffold gap size wrong estimation (local) 47418381 47423573 36823 42810 NC_000014.9 velvet.45332 99.81 True fake: scaffold gap size wrong estimation (local) 47440714 47448138 54528 62511 NC_000014.9 velvet.45332 99.84 True fake: scaffold gap size wrong estimation (local) 47448439 47455256 63321 70138 NC_000014.9 velvet.45332 99.94 True fake: scaffold gap size wrong estimation (local) 47456607 47457823 72217 73433 NC_000014.9 velvet.45332 99.84 True fake: scaffold gap size wrong estimation (local) 47458041 47459421 74260 75640 NC_000014.9 velvet.45332 100.0 True relocation, scaffold gap is present, inconsistency = 19821 47479253 47484826 81342 75651 NC_000014.9 velvet.45332 98.38 True relocation, scaffold gap is present, inconsistency = 8050 47459442 47462131 90414 93201 NC_000014.9 velvet.45332 98.2 True fake: scaffold gap size wrong estimation (local) 47462408 47465394 94226 97258 NC_000014.9 velvet.45332 97.25 True fake: scaffold gap size wrong estimation (local) 47465697 47467689 97669 99729 NC_000014.9 velvet.45332 95.8 True relocation, scaffold gap is present, inconsistency = 14078 47485278 47485880 103240 103840 NC_000014.9 velvet.45332 99.0 True fake: scaffold gap size wrong estimation (local) 47485970 47486474 103975 104480 NC_000014.9 velvet.45332 99.8 True fake: scaffold gap size wrong estimation (local) 47486698 47491811 105355 110468 NC_000014.9 velvet.45332 99.94 True fake: scaffold gap size wrong estimation (local) 47491812 47493514 111258 112960 NC_000014.9 velvet.45332 98.65 True indel: indel (> 5bp) 47493600 47494893 112961 114254 NC_000014.9 velvet.45332 98.53 True fake: scaffold gap size wrong estimation (local) 47494894 47496471 114948 116525 NC_000014.9 velvet.45332 99.18 True fake: scaffold gap size wrong estimation (local) 47497562 47499649 118407 120494 NC_000014.9 velvet.45332 99.95 True fake: scaffold gap size wrong estimation (local) 47522403 47525458 139085 142140 NC_000014.9 velvet.45332 99.93 True fake: scaffold gap size wrong estimation (local) 47525548 47529000 142290 146650 NC_000014.9 velvet.45332 99.94 True fake: scaffold gap size wrong estimation (local) 47529176 47530391 147358 148573 NC_000014.9 velvet.45332 99.51 True fake: scaffold gap size wrong estimation (local) 47531262 47536682 149895 156235 NC_000014.9 velvet.45332 99.94 True fake: scaffold gap size wrong estimation (local) 47560790 47570630 175860 187390 NC_000014.9 velvet.45332 98.9 True relocation, scaffold gap is present, inconsistency = 2825382 50396239 50398807 187617 190181 NC_000014.9 velvet.45332 99.8 True fake: scaffold gap size wrong estimation (local) 50399474 50401007 191669 193202 NC_000014.9 velvet.45332 100.0 True fake: scaffold gap size wrong estimation (local) 50401281 50401948 193656 194323 NC_000014.9 velvet.45332 100.0 True CONTIG velvet.45332 194323 misassembled CONTIG velvet.45338 224 unaligned 39926546 39928087 3568 2027 NC_000014.9 velvet.45363 100.0 True fake: scaffold gap size wrong estimation (local) 39925106 39926288 6253 5071 NC_000014.9 velvet.45363 99.92 True CONTIG velvet.45363 6253 correct 40834223 40835536 1314 1 NC_000014.9 velvet.45392 99.92 True CONTIG velvet.45392 1314 correct CONTIG velvet.45393 280 unaligned 19724961 19726000 1 1042 NC_000014.9 velvet.45420 98.66 True fake: scaffold gap size wrong estimation (local) 19726390 19736964 2273 13713 NC_000014.9 velvet.45420 99.89 True fake: scaffold gap size wrong estimation (local) 19737617 19739176 15090 16633 NC_000014.9 velvet.45420 98.91 True fake: scaffold gap size wrong estimation (local) 19739533 19740170 17634 18265 NC_000014.9 velvet.45420 99.04 True fake: scaffold gap size wrong estimation (local) 19754518 19757894 28730 32863 NC_000014.9 velvet.45420 99.85 True fake: scaffold gap size wrong estimation (local) 19758119 19775477 33706 51103 NC_000014.9 velvet.45420 99.7 True CONTIG velvet.45420 51103 correct 62091045 62091563 519 1 NC_000014.9 velvet.45468 100.0 True CONTIG velvet.45468 519 correct CONTIG velvet.45480 3812 unaligned CONTIG velvet.45497 3659 unaligned 57544513 57545058 30424 30969 NC_000014.9 velvet.45529 99.82 True CONTIG velvet.45529 30969 correct CONTIG velvet.45546 254 unaligned CONTIG velvet.45559 324 unaligned CONTIG velvet.45571 258 unaligned CONTIG velvet.45577 288 unaligned CONTIG velvet.45580 228 unaligned CONTIG velvet.45606 201 unaligned 36235556 36236355 1363 564 NC_000014.9 velvet.45647 99.75 True fake: scaffold gap size wrong estimation (local) 36233020 36235286 4629 2332 NC_000014.9 velvet.45647 96.68 True fake: scaffold gap size wrong estimation (local) 36194705 36198486 39873 36017 NC_000014.9 velvet.45647 97.49 True CONTIG velvet.45647 39895 correct CONTIG velvet.45661 335 unaligned CONTIG velvet.45671 291 unaligned 19979144 19979749 1 606 NC_000014.9 velvet.45720 100.0 True CONTIG velvet.45720 3649 correct CONTIG velvet.45729 454 unaligned CONTIG velvet.45730 235 unaligned CONTIG velvet.45819 251 unaligned CONTIG velvet.45843 228 unaligned CONTIG velvet.45844 201 unaligned CONTIG velvet.45857 849 unaligned CONTIG velvet.45894 231 unaligned CONTIG velvet.45911 260 unaligned 20877572 20878080 1 509 NC_000014.9 velvet.45943 99.8 True CONTIG velvet.45943 509 correct 68480365 68482196 2331 4186 NC_000014.9 velvet.45998 98.9 True fake: scaffold gap size wrong estimation (local) 68505854 68515442 22409 31997 NC_000014.9 velvet.45998 99.92 True fake: scaffold gap size wrong estimation (local) 68516077 68529239 33427 46515 NC_000014.9 velvet.45998 99.35 True fake: scaffold gap size wrong estimation (local) 68529436 68530220 47268 48052 NC_000014.9 velvet.45998 100.0 True CONTIG velvet.45998 48581 correct CONTIG velvet.46012 3685 unaligned CONTIG velvet.46019 211 unaligned CONTIG velvet.46071 216 unaligned CONTIG velvet.46136 245 unaligned 32725001 32728225 1 3225 NC_000014.9 velvet.46139 100.0 True CONTIG velvet.46139 3225 correct CONTIG velvet.46192 299 unaligned 18942096 18942689 1 594 NC_000014.9 velvet.46206 100.0 True CONTIG velvet.46206 594 correct CONTIG velvet.46372 349 unaligned CONTIG velvet.46400 385 unaligned CONTIG velvet.46401 273 unaligned CONTIG velvet.46440 219 unaligned 94996583 94997789 1 1207 NC_000014.9 velvet.46458 99.67 True fake: scaffold gap size wrong estimation (local) 94997991 95000578 1916 4471 NC_000014.9 velvet.46458 98.76 True CONTIG velvet.46458 4471 correct CONTIG velvet.46481 211 unaligned CONTIG velvet.46485 210 unaligned CONTIG velvet.46576 257 unaligned CONTIG velvet.46586 340 unaligned 24622741 24623385 4448 5092 NC_000014.9 velvet.46609 99.84 True CONTIG velvet.46609 5092 correct_unaligned 76949775 76951715 1980 1 NC_000014.9 velvet.46634 100.0 True fake: scaffold gap size wrong estimation (local) 76946586 76949167 5937 3409 NC_000014.9 velvet.46634 97.91 True fake: not a misassembly (possible transposable element) 29760622 29761766 10244 9100 NC_000014.9 velvet.46634 100.0 True fake: not a misassembly (possible transposable element) 76941216 76943758 13605 11063 NC_000014.9 velvet.46634 99.72 True fake: scaffold gap size wrong estimation (local) 76903496 76905349 44890 43061 NC_000014.9 velvet.46634 98.7 True relocation, scaffold gap is present, inconsistency = 8284904 68615616 68617805 47866 45677 NC_000014.9 velvet.46634 99.95 True fake: scaffold gap size wrong estimation (local) 68613742 68614918 50479 49303 NC_000014.9 velvet.46634 100.0 True fake: scaffold gap size wrong estimation (local) 68597753 68613131 67445 51541 NC_000014.9 velvet.46634 99.38 True relocation, scaffold gap is present, inconsistency = -11479 68595954 68597436 80723 79241 NC_000014.9 velvet.46634 99.66 True relocation, scaffold gap is present, inconsistency = 12550476 56040826 56045467 80734 85375 NC_000014.9 velvet.46634 100.0 True fake: scaffold gap size wrong estimation (local) 56045558 56047584 85552 87578 NC_000014.9 velvet.46634 100.0 True fake: scaffold gap size wrong estimation (local) 56047810 56054582 88503 95275 NC_000014.9 velvet.46634 100.0 True relocation, scaffold gap is present, inconsistency = 12531094 68585687 68586737 96336 95286 NC_000014.9 velvet.46634 99.81 True fake: scaffold gap size wrong estimation (local) 68578389 68581630 101353 98152 NC_000014.9 velvet.46634 98.74 True relocation, scaffold gap is present, inconsistency = -7913347 76484117 76485227 108972 107862 NC_000014.9 velvet.46634 99.73 True relocation, scaffold gap is present, inconsistency = -399078 76867167 76869466 124961 122701 NC_000014.9 velvet.46634 98.26 True fake: scaffold gap size wrong estimation (local) 76864788 76866931 128245 126102 NC_000014.9 velvet.46634 99.53 True relocation, scaffold gap is present, inconsistency = 20778451 56080762 56085158 129424 133947 NC_000014.9 velvet.46634 99.82 True fake: scaffold gap size wrong estimation (local) 56085301 56091660 134878 141237 NC_000014.9 velvet.46634 99.98 True relocation, scaffold gap is present, inconsistency = 20760330 76852890 76853425 142672 142137 NC_000014.9 velvet.46634 100.0 True fake: scaffold gap size wrong estimation (extensive) 76844261 76845044 144205 143422 NC_000014.9 velvet.46634 99.87 True relocation, scaffold gap is present, inconsistency = -8182 76850863 76851370 145785 145278 NC_000014.9 velvet.46634 100.0 True fake: scaffold gap size wrong estimation (extensive) 76824602 76835205 180006 168504 NC_000014.9 velvet.46634 99.94 True fake: scaffold gap size wrong estimation (local) 76822753 76823645 182768 181876 NC_000014.9 velvet.46634 99.89 True fake: scaffold gap size wrong estimation (local) 76810440 76819205 192337 183481 NC_000014.9 velvet.46634 99.93 True relocation, scaffold gap is present, inconsistency = 55209 76752273 76755220 192348 195295 NC_000014.9 velvet.46634 99.86 True local misassembly 76758928 76761914 195296 198282 NC_000014.9 velvet.46634 99.5 True fake: scaffold gap size wrong estimation (local) 76761915 76764020 198371 200476 NC_000014.9 velvet.46634 99.05 True fake: scaffold gap size wrong estimation (local) 76764021 76764702 200529 201210 NC_000014.9 velvet.46634 97.51 True relocation, scaffold gap is present, inconsistency = 44789 76820057 76821202 212921 211776 NC_000014.9 velvet.46634 100.0 True fake: scaffold gap size wrong estimation (local) 76805029 76810411 222559 217177 NC_000014.9 velvet.46634 99.98 True fake: scaffold gap size wrong estimation (local) 76802177 76804724 226226 223689 NC_000014.9 velvet.46634 99.61 True fake: scaffold gap size wrong estimation (local) 76801337 76801872 227943 227408 NC_000014.9 velvet.46634 100.0 True inversion, scaffold gap is present 76793589 76794415 229358 230184 NC_000014.9 velvet.46634 100.0 True fake: scaffold gap size wrong estimation (local) 76794705 76796269 230652 232216 NC_000014.9 velvet.46634 99.94 True inversion, scaffold gap is present 76797672 76798669 233691 232717 NC_000014.9 velvet.46634 97.37 True fake: scaffold gap size wrong estimation (local) 76796312 76797324 235099 234087 NC_000014.9 velvet.46634 99.9 True relocation, scaffold gap is present, inconsistency = -26046676 102842228 102842915 235859 235172 NC_000014.9 velvet.46634 100.0 True fake: scaffold gap size wrong estimation (local) 102839493 102841963 239254 236393 NC_000014.9 velvet.46634 99.92 True inversion, scaffold gap is present 102837446 102839233 239409 241196 NC_000014.9 velvet.46634 99.89 True fake: scaffold gap size wrong estimation (local) 102843807 102844785 241207 242185 NC_000014.9 velvet.46634 100.0 True inversion, scaffold gap is present 102835465 102837089 244333 242683 NC_000014.9 velvet.46634 98.24 True fake: scaffold gap size wrong estimation (local) 102832640 102833712 247919 246847 NC_000014.9 velvet.46634 99.91 True fake: scaffold gap size wrong estimation (local) 102829865 102832388 251563 249040 NC_000014.9 velvet.46634 99.96 True fake: scaffold gap size wrong estimation (local) 102804603 102808209 280020 275470 NC_000014.9 velvet.46634 99.92 True indel: indel (> 5bp) 102804036 102804571 280622 280087 NC_000014.9 velvet.46634 100.0 True fake: scaffold gap size wrong estimation (local) 102799650 102800686 281669 280633 NC_000014.9 velvet.46634 100.0 True relocation, scaffold gap is present, inconsistency = 26006073 76790039 76792904 285207 282342 NC_000014.9 velvet.46634 100.0 True fake: scaffold gap size wrong estimation (local) 76786444 76789683 289604 286365 NC_000014.9 velvet.46634 99.97 True fake: scaffold gap size wrong estimation (local) 76772204 76786136 304797 290724 NC_000014.9 velvet.46634 99.96 True fake: scaffold gap size wrong estimation (local) 76767261 76771955 310496 305799 NC_000014.9 velvet.46634 99.85 True fake: scaffold gap size wrong estimation (local) 76764963 76766985 313569 311601 NC_000014.9 velvet.46634 97.22 True fake: scaffold gap size wrong estimation (local) 76758065 76758615 314479 313929 NC_000014.9 velvet.46634 99.82 True fake: scaffold gap size wrong estimation (local) 76755525 76757023 317530 316032 NC_000014.9 velvet.46634 99.8 True fake: scaffold gap size wrong estimation (extensive) 76735626 76736469 329712 328869 NC_000014.9 velvet.46634 99.64 True fake: scaffold gap size wrong estimation (local) 76732518 76733787 333538 332309 NC_000014.9 velvet.46634 96.67 True fake: scaffold gap size wrong estimation (local) 76729900 76731910 337298 335288 NC_000014.9 velvet.46634 99.8 True fake: scaffold gap size wrong estimation (local) 76727167 76729611 340789 338403 NC_000014.9 velvet.46634 97.46 True fake: scaffold gap size wrong estimation (local) 76726295 76727139 342119 341275 NC_000014.9 velvet.46634 100.0 True fake: scaffold gap size wrong estimation (local) 76724713 76725953 344014 342774 NC_000014.9 velvet.46634 99.92 True fake: scaffold gap size wrong estimation (extensive) 76715362 76717251 345914 344025 NC_000014.9 velvet.46634 99.42 True local misassembly 76713038 76714209 347086 345915 NC_000014.9 velvet.46634 100.0 True local misassembly 76717520 76718950 348824 347394 NC_000014.9 velvet.46634 100.0 True local misassembly 76721673 76722286 349448 348835 NC_000014.9 velvet.46634 100.0 True local misassembly 76722574 76724679 351564 349459 NC_000014.9 velvet.46634 100.0 True relocation, scaffold gap is present, inconsistency = -23796 76742967 76743990 354967 353944 NC_000014.9 velvet.46634 99.8 True fake: scaffold gap size wrong estimation (local) 76738398 76739101 356265 355562 NC_000014.9 velvet.46634 99.72 True relocation, scaffold gap is present, inconsistency = -26037926 102724608 102725584 407981 407005 NC_000014.9 velvet.46634 100.0 True relocation, scaffold gap is present, inconsistency = 30815016 71906822 71909581 407992 410751 NC_000014.9 velvet.46634 99.86 True local misassembly 71905775 71906789 410762 411776 NC_000014.9 velvet.46634 99.8 True relocation, scaffold gap is present, inconsistency = 30819184 102726426 102732629 418432 412229 NC_000014.9 velvet.46634 99.98 True relocation, scaffold gap is present, inconsistency = -11780 102735982 102736544 420656 420094 NC_000014.9 velvet.46634 98.22 True fake: scaffold gap size wrong estimation (local) 102732931 102733992 424681 423620 NC_000014.9 velvet.46634 99.91 True relocation, scaffold gap is present, inconsistency = 14547 102697986 102698925 445079 444140 NC_000014.9 velvet.46634 100.0 True fake: scaffold gap size wrong estimation (local) 102695818 102697708 447786 445852 NC_000014.9 velvet.46634 99.84 True fake: scaffold gap size wrong estimation (local) 102694546 102695560 449622 448607 NC_000014.9 velvet.46634 99.9 True fake: scaffold gap size wrong estimation (local) 102693016 102694262 451177 449936 NC_000014.9 velvet.46634 99.6 True relocation, scaffold gap is present, inconsistency = -12942 102701941 102704428 455194 452707 NC_000014.9 velvet.46634 100.0 True fake: scaffold gap size wrong estimation (local) 102673884 102674785 482428 481527 NC_000014.9 velvet.46634 100.0 True fake: scaffold gap size wrong estimation (local) 102672484 102673322 484157 483310 NC_000014.9 velvet.46634 100.0 True CONTIG velvet.46634 484157 misassembled CONTIG velvet.46640 203 unaligned CONTIG velvet.46677 233 unaligned 69099896 69102124 1141 3369 NC_000014.9 velvet.46680 99.96 True fake: scaffold gap size wrong estimation (local) 69104890 69105940 3380 4430 NC_000014.9 velvet.46680 100.0 True local misassembly 69102403 69104608 4441 6698 NC_000014.9 velvet.46680 100.0 True CONTIG velvet.46680 9281 correct 95364635 95366282 1 1648 NC_000014.9 velvet.46688 99.88 True fake: scaffold gap size wrong estimation (local) 95366572 95367377 3134 3939 NC_000014.9 velvet.46688 100.0 True CONTIG velvet.46688 4071 correct 58997615 58999447 1811 1 NC_000014.9 velvet.46691 98.29 True indel: indel (> 5bp) 58996777 58997602 2679 1854 NC_000014.9 velvet.46691 99.64 True CONTIG velvet.46691 2679 correct CONTIG velvet.46709 214 unaligned CONTIG velvet.46734 3769 unaligned CONTIG velvet.46737 212 unaligned CONTIG velvet.46759 206 unaligned 38196496 38197542 1047 1 NC_000014.9 velvet.46768 99.81 True CONTIG velvet.46768 1047 correct 63557029 63557833 1 805 NC_000014.9 velvet.46814 100.0 True fake: scaffold gap size wrong estimation (local) 63562505 63563983 6873 8351 NC_000014.9 velvet.46814 100.0 True fake: scaffold gap size wrong estimation (local) 63565071 63566298 10366 11582 NC_000014.9 velvet.46814 99.01 True fake: scaffold gap size wrong estimation (local) 63597298 63600249 38847 41798 NC_000014.9 velvet.46814 100.0 True fake: scaffold gap size wrong estimation (local) 63600754 63602221 44174 45641 NC_000014.9 velvet.46814 99.52 True relocation, scaffold gap is present, inconsistency = -12820 63593793 63596279 50033 52519 NC_000014.9 velvet.46814 100.0 True fake: scaffold gap size wrong estimation (local) 63596518 63597219 53323 54024 NC_000014.9 velvet.46814 100.0 True fake: scaffold gap size wrong estimation (local) 63624542 63625871 81021 82350 NC_000014.9 velvet.46814 100.0 True fake: scaffold gap size wrong estimation (local) 63626714 63630001 83785 87878 NC_000014.9 velvet.46814 99.9 True fake: scaffold gap size wrong estimation (local) 63630676 63631426 88269 89343 NC_000014.9 velvet.46814 100.0 True CONTIG velvet.46814 89445 misassembled CONTIG velvet.46827 200 unaligned CONTIG velvet.46909 252 unaligned 95594140 95594794 1527 2181 NC_000014.9 velvet.46935 99.69 True fake: scaffold gap size wrong estimation (local) 95595117 95596967 2585 4435 NC_000014.9 velvet.46935 99.89 True CONTIG velvet.46935 4435 correct CONTIG velvet.46965 36632 unaligned CONTIG velvet.46980 256 unaligned 34551480 34552098 330 948 NC_000014.9 velvet.46986 99.68 True fake: scaffold gap size wrong estimation (local) 34553953 34555245 3481 4773 NC_000014.9 velvet.46986 99.92 True CONTIG velvet.46986 4775 correct CONTIG velvet.47049 202 unaligned CONTIG velvet.47065 260 unaligned CONTIG velvet.47092 3933 unaligned 52947455 52950819 3419 10 NC_000014.9 velvet.47126 99.97 True fake: scaffold gap size wrong estimation (local) 52943194 52945004 8890 7080 NC_000014.9 velvet.47126 100.0 True fake: scaffold gap size wrong estimation (local) 52939374 52942275 13651 10504 NC_000014.9 velvet.47126 99.9 True fake: scaffold gap size wrong estimation (local) 52937112 52938575 16698 15235 NC_000014.9 velvet.47126 99.93 True CONTIG velvet.47126 16885 correct CONTIG velvet.47146 3767 unaligned CONTIG velvet.47149 244 unaligned 58691825 58692331 3471 3977 NC_000014.9 velvet.47165 100.0 True CONTIG velvet.47165 3977 correct_unaligned CONTIG velvet.47179 319 unaligned 91491678 91493102 1793 368 NC_000014.9 velvet.47206 99.86 True fake: scaffold gap size wrong estimation (extensive) 91464270 91465112 22120 21278 NC_000014.9 velvet.47206 97.15 True fake: scaffold gap size wrong estimation (local) 91463530 91464053 22786 22263 NC_000014.9 velvet.47206 100.0 True CONTIG velvet.47206 23104 correct 67605953 67606595 1 643 NC_000014.9 velvet.47213 100.0 True fake: scaffold gap size wrong estimation (local) 67608111 67609908 2939 4736 NC_000014.9 velvet.47213 99.44 True fake: scaffold gap size wrong estimation (local) 67609909 67611306 5480 6877 NC_000014.9 velvet.47213 97.14 True fake: scaffold gap size wrong estimation (local) 67612105 67612684 8988 9567 NC_000014.9 velvet.47213 100.0 True local misassembly 67612963 67613976 9568 10581 NC_000014.9 velvet.47213 98.92 True indel: indel (> 5bp) 67614008 67614682 10582 11256 NC_000014.9 velvet.47213 98.52 True indel: indel (> 5bp) 67614868 67616228 11457 12817 NC_000014.9 velvet.47213 99.19 True fake: scaffold gap size wrong estimation (local) 67617989 67618552 15392 15955 NC_000014.9 velvet.47213 100.0 True CONTIG velvet.47213 15955 correct 24485347 24486110 1 764 NC_000014.9 velvet.47223 99.61 True CONTIG velvet.47223 764 correct 29966786 29967805 1 1020 NC_000014.9 velvet.47227 100.0 True CONTIG velvet.47227 1020 correct CONTIG velvet.47248 6965 unaligned 30868555 30869152 28871 29468 NC_000014.9 velvet.47297 100.0 True fake: scaffold gap size wrong estimation (local) 30869406 30871980 30207 32789 NC_000014.9 velvet.47297 99.96 True CONTIG velvet.47297 32789 correct 66225815 66229362 4440 1 NC_000014.9 velvet.47334 100.0 True CONTIG velvet.47334 4440 correct 57537663 57538348 4815 5500 NC_000014.9 velvet.47359 99.85 True CONTIG velvet.47359 5822 correct_unaligned CONTIG velvet.47372 212 unaligned CONTIG velvet.47380 313 unaligned CONTIG velvet.47393 244 unaligned CONTIG velvet.47419 213 unaligned CONTIG velvet.47427 217 unaligned 23191350 23192016 3970 3304 NC_000014.9 velvet.47438 99.7 True CONTIG velvet.47438 3979 correct 84942008 84943450 1 1443 NC_000014.9 velvet.47472 99.72 True CONTIG velvet.47472 1443 correct 89723934 89725230 161 1457 NC_000014.9 velvet.47493 99.92 True fake: scaffold gap size wrong estimation (local) 89725577 89726330 2509 3262 NC_000014.9 velvet.47493 98.41 True relocation, scaffold gap is present, inconsistency = -27749891 61979897 61982323 6720 9146 NC_000014.9 velvet.47493 99.88 True fake: scaffold gap size wrong estimation (local) 61982637 61986473 10566 14402 NC_000014.9 velvet.47493 99.97 True fake: scaffold gap size wrong estimation (local) 61986653 61988890 15332 17561 NC_000014.9 velvet.47493 99.55 True relocation, scaffold gap is present, inconsistency = 27725915 89714816 89716294 17572 19050 NC_000014.9 velvet.47493 99.66 True fake: scaffold gap size wrong estimation (local) 89744591 89748641 48777 52909 NC_000014.9 velvet.47493 99.85 True fake: scaffold gap size wrong estimation (local) 89748880 89752317 53861 57298 NC_000014.9 velvet.47493 99.94 True fake: scaffold gap size wrong estimation (local) 89752639 89753867 58340 59568 NC_000014.9 velvet.47493 98.54 True fake: scaffold gap size wrong estimation (local) 89757346 89758102 63629 64385 NC_000014.9 velvet.47493 99.74 True relocation, scaffold gap is present, inconsistency = 2605184 87145579 87150764 71061 65783 NC_000014.9 velvet.47493 99.94 True fake: scaffold gap size wrong estimation (local) 87138116 87145413 80203 72041 NC_000014.9 velvet.47493 99.48 True fake: scaffold gap size wrong estimation (local) 87135835 87137887 83163 81111 NC_000014.9 velvet.47493 99.9 True fake: scaffold gap size wrong estimation (local) 87131038 87135561 88688 84167 NC_000014.9 velvet.47493 99.85 True fake: scaffold gap size wrong estimation (local) 87130047 87130758 90368 89658 NC_000014.9 velvet.47493 99.58 True fake: scaffold gap size wrong estimation (local) 87125312 87129858 95557 90634 NC_000014.9 velvet.47493 99.93 True relocation, scaffold gap is present, inconsistency = 63525375 23599105 23599861 96389 95633 NC_000014.9 velvet.47493 99.87 True relocation, scaffold gap is present, inconsistency = -9562 23604824 23607936 100232 97120 NC_000014.9 velvet.47493 99.87 True relocation, scaffold gap is present, inconsistency = 66168843 89776857 89777929 100310 101382 NC_000014.9 velvet.47493 99.35 True fake: scaffold gap size wrong estimation (local) 89778198 89779360 101688 102849 NC_000014.9 velvet.47493 98.88 True fake: scaffold gap size wrong estimation (local) 89780508 89782395 104780 106667 NC_000014.9 velvet.47493 99.89 True fake: scaffold gap size wrong estimation (local) 89783378 89788232 108651 113521 NC_000014.9 velvet.47493 99.3 True fake: scaffold gap size wrong estimation (local) 89789116 89791142 115346 117372 NC_000014.9 velvet.47493 99.75 True fake: scaffold gap size wrong estimation (local) 89791426 89794989 118436 121999 NC_000014.9 velvet.47493 99.92 True fake: scaffold gap size wrong estimation (local) 89795664 89796426 123218 123980 NC_000014.9 velvet.47493 98.43 True fake: scaffold gap size wrong estimation (local) 89802686 89810548 126145 134007 NC_000014.9 velvet.47493 99.89 True fake: scaffold gap size wrong estimation (local) 89810786 89814099 135147 138460 NC_000014.9 velvet.47493 99.91 True fake: scaffold gap size wrong estimation (local) 89814736 89815480 139843 140587 NC_000014.9 velvet.47493 100.0 True fake: scaffold gap size wrong estimation (local) 89815722 89817739 141097 143025 NC_000014.9 velvet.47493 95.52 True fake: scaffold gap size wrong estimation (local) 89818050 89821046 143995 147469 NC_000014.9 velvet.47493 99.87 True fake: scaffold gap size wrong estimation (local) 89821140 89827650 147767 154274 NC_000014.9 velvet.47493 99.92 True fake: not a misassembly (possible transposable element) 29227228 29229177 157631 155682 NC_000014.9 velvet.47493 99.9 True fake: not a misassembly (possible transposable element) 89835931 89836765 157682 158516 NC_000014.9 velvet.47493 99.64 True fake: scaffold gap size wrong estimation (local) 89836863 89842336 159321 164834 NC_000014.9 velvet.47493 99.74 True fake: scaffold gap size wrong estimation (local) 89842564 89847489 165907 170822 NC_000014.9 velvet.47493 99.7 True fake: scaffold gap size wrong estimation (local) 89847788 89848676 171484 172372 NC_000014.9 velvet.47493 100.0 True fake: scaffold gap size wrong estimation (local) 89848850 89855183 173083 179480 NC_000014.9 velvet.47493 99.97 True fake: scaffold gap size wrong estimation (local) 89855473 89856205 180263 180976 NC_000014.9 velvet.47493 97.37 True fake: scaffold gap size wrong estimation (local) 89856485 89858568 181799 183882 NC_000014.9 velvet.47493 100.0 True fake: scaffold gap size wrong estimation (local) 89858761 89860109 184759 186107 NC_000014.9 velvet.47493 100.0 True relocation, scaffold gap is present, inconsistency = -60623802 29236318 29239431 186118 189336 NC_000014.9 velvet.47493 100.0 True fake: scaffold gap size wrong estimation (local) 29239695 29244293 190356 194954 NC_000014.9 velvet.47493 99.98 True fake: scaffold gap size wrong estimation (local) 29244841 29250240 196353 202628 NC_000014.9 velvet.47493 95.25 True fake: scaffold gap size wrong estimation (local) 29252186 29253681 205469 206952 NC_000014.9 velvet.47493 99.06 True relocation, scaffold gap is present, inconsistency = 60619496 89875415 89877106 209190 210881 NC_000014.9 velvet.47493 99.88 True fake: scaffold gap size wrong estimation (local) 89881751 89882735 210946 211930 NC_000014.9 velvet.47493 99.9 True local misassembly 89877339 89881507 211941 216109 NC_000014.9 velvet.47493 99.98 True fake: scaffold gap size wrong estimation (extensive) 89892931 89893786 219183 220038 NC_000014.9 velvet.47493 99.65 True fake: scaffold gap size wrong estimation (local) 89894407 89896112 221154 222884 NC_000014.9 velvet.47493 98.27 True fake: scaffold gap size wrong estimation (local) 89896404 89897223 223067 223908 NC_000014.9 velvet.47493 97.15 True relocation, scaffold gap is present, inconsistency = 60636797 29257397 29258825 226115 224690 NC_000014.9 velvet.47493 99.3 True fake: scaffold gap size wrong estimation (local) 29254246 29255974 227854 226126 NC_000014.9 velvet.47493 100.0 True relocation, scaffold gap is present, inconsistency = -14573 29263222 29268016 233566 228657 NC_000014.9 velvet.47493 99.87 True fake: scaffold gap size wrong estimation (local) 29259567 29263202 237989 234354 NC_000014.9 velvet.47493 99.83 True inversion, scaffold gap is present 29269748 29280860 238000 250425 NC_000014.9 velvet.47493 99.89 True fake: scaffold gap size wrong estimation (local) 29281155 29283992 251359 254196 NC_000014.9 velvet.47493 100.0 True fake: scaffold gap size wrong estimation (local) 29297961 29305639 269841 277505 NC_000014.9 velvet.47493 99.77 True fake: scaffold gap size wrong estimation (local) 29305881 29308206 278495 280816 NC_000014.9 velvet.47493 99.74 True fake: not a misassembly (possible transposable element) 99003185 99004930 300378 302112 NC_000014.9 velvet.47493 99.25 True fake: not a misassembly (possible transposable element) 29329916 29333520 302376 305969 NC_000014.9 velvet.47493 99.56 True relocation, scaffold gap is present, inconsistency = 13908826 43243061 43243757 306684 307380 NC_000014.9 velvet.47493 100.0 True fake: not a misassembly (possible transposable element) 79625075 79631708 307391 314145 NC_000014.9 velvet.47493 100.0 True fake: not a misassembly (possible transposable element) 43244475 43246066 314156 315747 NC_000014.9 velvet.47493 99.56 True relocation, scaffold gap is present, inconsistency = 39088869 82335131 82336305 315943 317117 NC_000014.9 velvet.47493 100.0 True relocation, scaffold gap is present, inconsistency = -2703972 79632344 79634587 317128 319371 NC_000014.9 velvet.47493 99.96 True fake: scaffold gap size wrong estimation (local) 79634588 79635809 321136 322357 NC_000014.9 velvet.47493 100.0 True relocation, scaffold gap is present, inconsistency = 2699905 82336555 82337238 323198 323881 NC_000014.9 velvet.47493 99.71 True indel: indel (> 5bp) 82337239 82338621 323909 325291 NC_000014.9 velvet.47493 100.0 True fake: scaffold gap size wrong estimation (local) 82338622 82346285 328322 335985 NC_000014.9 velvet.47493 99.96 True fake: scaffold gap size wrong estimation (local) 82353569 82354832 336831 338094 NC_000014.9 velvet.47493 100.0 True indel: indel (<= 5bp) 82354834 82357730 338095 340991 NC_000014.9 velvet.47493 100.0 True fake: scaffold gap size wrong estimation (local) 82357731 82359800 341093 343162 NC_000014.9 velvet.47493 98.7 True local misassembly 82361526 82364764 343163 346401 NC_000014.9 velvet.47493 99.66 True fake: scaffold gap size wrong estimation (local) 82364765 82369881 346540 351656 NC_000014.9 velvet.47493 99.53 True relocation, scaffold gap is present, inconsistency = 45834 82415726 82421938 351667 357843 NC_000014.9 velvet.47493 99.31 True relocation, scaffold gap is present, inconsistency = -36439045 45982996 45985227 357946 360176 NC_000014.9 velvet.47493 99.69 True relocation, scaffold gap is present, inconsistency = -19902644 26083063 26086247 360656 363840 NC_000014.9 velvet.47493 99.97 True relocation, scaffold gap is present, inconsistency = 72923334 99009592 99011437 365696 363851 NC_000014.9 velvet.47493 99.84 True relocation, scaffold gap is present, inconsistency = 19398062 79610070 79611308 367156 365918 NC_000014.9 velvet.47493 100.0 True fake: scaffold gap size wrong estimation (local) 79607871 79609825 369820 367866 NC_000014.9 velvet.47493 100.0 True relocation, scaffold gap is present, inconsistency = -19408014 99013798 99015874 371907 369831 NC_000014.9 velvet.47493 99.71 True relocation, scaffold gap is present, inconsistency = 16622633 82385881 82390088 372984 377187 NC_000014.9 velvet.47493 99.81 True fake: scaffold gap size wrong estimation (local) 82390341 82395582 377849 383748 NC_000014.9 velvet.47493 99.73 True relocation, scaffold gap is present, inconsistency = 11133336 71253154 71254131 387599 386622 NC_000014.9 velvet.47493 99.69 True relocation, scaffold gap is present, inconsistency = -31485 71281083 71284628 391209 387610 NC_000014.9 velvet.47493 99.94 True relocation, scaffold gap is present, inconsistency = 11121269 82422179 82432112 407491 418272 NC_000014.9 velvet.47493 99.5 True relocation, scaffold gap is present, inconsistency = 11175428 71243330 71246430 421723 418593 NC_000014.9 velvet.47493 98.79 True fake: not a misassembly (possible transposable element) 31027629 31028156 422312 421785 NC_000014.9 velvet.47493 100.0 True fake: not a misassembly (possible transposable element) 71211018 71211807 454684 453893 NC_000014.9 velvet.47493 99.1 True relocation, scaffold gap is present, inconsistency = 17763055 88974873 88978560 454695 458382 NC_000014.9 velvet.47493 100.0 True fake: not a misassembly (possible transposable element) 93309411 93310556 459538 458393 NC_000014.9 velvet.47493 100.0 True fake: not a misassembly (possible transposable element) 88978845 88980915 459549 461640 NC_000014.9 velvet.47493 99.95 True relocation, scaffold gap is present, inconsistency = 4327356 93308282 93309322 462691 461651 NC_000014.9 velvet.47493 98.94 True local misassembly 93306444 93308022 464270 462692 NC_000014.9 velvet.47493 100.0 True relocation, scaffold gap is present, inconsistency = 16327325 76977414 76978579 465975 464810 NC_000014.9 velvet.47493 100.0 True relocation, scaffold gap is present, inconsistency = 16316530 93295429 93297378 466295 468244 NC_000014.9 velvet.47493 100.0 True fake: scaffold gap size wrong estimation (local) 93301610 93302591 468669 469650 NC_000014.9 velvet.47493 100.0 True relocation, scaffold gap is present, inconsistency = -28106884 65195718 65196509 469661 470452 NC_000014.9 velvet.47493 100.0 True local misassembly 65196737 65197509 470453 471225 NC_000014.9 velvet.47493 98.71 True relocation, scaffold gap is present, inconsistency = 28106928 93304626 93306333 473121 471414 NC_000014.9 velvet.47493 100.0 True fake: scaffold gap size wrong estimation (local) 93302746 93304343 475688 473492 NC_000014.9 velvet.47493 99.94 True relocation, scaffold gap is present, inconsistency = -5692386 98993487 98995121 477333 475699 NC_000014.9 velvet.47493 99.94 True fake: scaffold gap size wrong estimation (local) 98981566 98985203 484965 481328 NC_000014.9 velvet.47493 99.97 True relocation, scaffold gap is present, inconsistency = 9979639 88994841 88999758 487134 492050 NC_000014.9 velvet.47493 99.84 True fake: scaffold gap size wrong estimation (local) 89006038 89009225 492061 495248 NC_000014.9 velvet.47493 100.0 True fake: scaffold gap size wrong estimation (local) 89009519 89015124 496378 501983 NC_000014.9 velvet.47493 100.0 True relocation, scaffold gap is present, inconsistency = -9844 89005291 89005899 501994 502601 NC_000014.9 velvet.47493 99.84 True fake: scaffold gap size wrong estimation (local) 89039736 89043636 531030 534909 NC_000014.9 velvet.47493 99.46 True fake: scaffold gap size wrong estimation (local) 89044290 89045890 536269 537869 NC_000014.9 velvet.47493 100.0 True fake: scaffold gap size wrong estimation (local) 89046110 89047008 538315 539207 NC_000014.9 velvet.47493 99.33 True relocation, scaffold gap is present, inconsistency = 27441 89107164 89111492 576243 571922 NC_000014.9 velvet.47493 99.72 True fake: scaffold gap size wrong estimation (extensive) 89096112 89098821 579007 576254 NC_000014.9 velvet.47493 99.85 True relocation, scaffold gap is present, inconsistency = 130876 88960160 88965225 579018 584355 NC_000014.9 velvet.47493 96.05 True fake: scaffold gap size wrong estimation (local) 88970730 88972381 585704 587355 NC_000014.9 velvet.47493 100.0 True fake: scaffold gap size wrong estimation (local) 88999781 89005110 612578 617846 NC_000014.9 velvet.47493 98.55 True relocation, scaffold gap is present, inconsistency = 72189 89077310 89078943 617857 619490 NC_000014.9 velvet.47493 100.0 True inversion, scaffold gap is present 89075625 89076955 620820 619501 NC_000014.9 velvet.47493 99.17 True fake: scaffold gap size wrong estimation (local) 89070158 89071953 623371 621489 NC_000014.9 velvet.47493 95.27 True relocation, scaffold gap is present, inconsistency = 8975 89081054 89082065 623497 624508 NC_000014.9 velvet.47493 100.0 True fake: scaffold gap size wrong estimation (local) 89082651 89086629 625982 629959 NC_000014.9 velvet.47493 99.95 True relocation, scaffold gap is present, inconsistency = 9252 89072874 89073388 630484 629970 NC_000014.9 velvet.47493 98.06 True fake: scaffold gap size wrong estimation (local) 89064065 89069007 637164 631700 NC_000014.9 velvet.47493 99.9 True fake: scaffold gap size wrong estimation (local) 89061000 89063772 640812 638040 NC_000014.9 velvet.47493 100.0 True relocation, scaffold gap is present, inconsistency = 8100 89032147 89038319 655393 661644 NC_000014.9 velvet.47493 99.98 True inversion, scaffold gap is present 89038710 89039427 662372 661655 NC_000014.9 velvet.47493 100.0 True CONTIG velvet.47493 662372 misassembled CONTIG velvet.47518 210 unaligned 49870962 49872641 1 1680 NC_000014.9 velvet.47535 99.94 True fake: not a misassembly (possible transposable element) 102065520 102066706 32188 31002 NC_000014.9 velvet.47535 99.92 True fake: not a misassembly (possible transposable element) 49904072 49904707 33537 34172 NC_000014.9 velvet.47535 100.0 True local misassembly 49904963 49905555 34173 34765 NC_000014.9 velvet.47535 98.15 True CONTIG velvet.47535 35143 correct 61091028 61092297 1 1270 NC_000014.9 velvet.47541 99.92 True CONTIG velvet.47541 1270 correct CONTIG velvet.47544 308 unaligned CONTIG velvet.47612 239 unaligned CONTIG velvet.47630 239 unaligned 78379043 78380229 1220 34 NC_000014.9 velvet.47632 100.0 True CONTIG velvet.47632 1220 correct 31008294 31008795 3307 3808 NC_000014.9 velvet.47650 100.0 True local misassembly 31008934 31009617 3809 4492 NC_000014.9 velvet.47650 98.54 True relocation, scaffold gap is present, inconsistency = -16334 31022386 31023815 35024 33595 NC_000014.9 velvet.47650 99.93 True CONTIG velvet.47650 35024 misassembled 74157502 74158120 630 12 NC_000014.9 velvet.47677 100.0 True relocation, scaffold gap is present, inconsistency = 5309162 68846819 68847813 2151 1157 NC_000014.9 velvet.47677 99.8 True fake: scaffold gap size wrong estimation (local) 68829886 68830956 17289 16219 NC_000014.9 velvet.47677 99.63 True fake: scaffold gap size wrong estimation (local) 68827757 68828318 20209 19648 NC_000014.9 velvet.47677 100.0 True CONTIG velvet.47677 20209 misassembled CONTIG velvet.47679 242 unaligned 85346568 85347546 979 1 NC_000014.9 velvet.47729 100.0 True CONTIG velvet.47729 979 correct 92024372 92025629 1258 1 NC_000014.9 velvet.47741 100.0 True fake: scaffold gap size wrong estimation (local) 92021391 92023841 4857 2407 NC_000014.9 velvet.47741 100.0 True relocation, scaffold gap is present, inconsistency = 24483830 67533393 67534303 9025 8115 NC_000014.9 velvet.47741 99.89 True relocation, scaffold gap is present, inconsistency = 24484696 92019010 92020022 9036 10048 NC_000014.9 velvet.47741 100.0 True fake: not a misassembly (possible transposable element) 92017299 92018081 11385 10603 NC_000014.9 velvet.47741 100.0 True fake: not a misassembly (possible transposable element) 92047725 92048234 39070 39579 NC_000014.9 velvet.47741 99.41 True fake: scaffold gap size wrong estimation (local) 92049701 92050691 41979 43012 NC_000014.9 velvet.47741 100.0 True CONTIG velvet.47741 43273 misassembled CONTIG velvet.47753 269 unaligned CONTIG velvet.47845 285 unaligned CONTIG velvet.47857 358 unaligned CONTIG velvet.47882 242 unaligned CONTIG velvet.47897 345 unaligned CONTIG velvet.47922 211 unaligned CONTIG velvet.47934 225 unaligned CONTIG velvet.47952 247 unaligned CONTIG velvet.48015 202 unaligned CONTIG velvet.48035 309 unaligned 75005409 75010944 1511 7042 NC_000014.9 velvet.48042 99.51 True fake: scaffold gap size wrong estimation (local) 75011009 75017296 7785 14196 NC_000014.9 velvet.48042 97.91 True fake: scaffold gap size wrong estimation (local) 75018183 75019165 15734 16716 NC_000014.9 velvet.48042 99.8 True fake: scaffold gap size wrong estimation (local) 75019444 75020853 17364 18760 NC_000014.9 velvet.48042 99.01 True fake: scaffold gap size wrong estimation (local) 75021580 75024241 19634 22957 NC_000014.9 velvet.48042 99.74 True fake: scaffold gap size wrong estimation (local) 75024496 75026841 24011 26356 NC_000014.9 velvet.48042 99.74 True fake: scaffold gap size wrong estimation (local) 75027702 75028434 27946 28678 NC_000014.9 velvet.48042 99.86 True CONTIG velvet.48042 30020 correct CONTIG velvet.48112 423 unaligned 85139386 85139959 834 1407 NC_000014.9 velvet.48118 99.83 True fake: scaffold gap size wrong estimation (local) 85140636 85142044 2395 3803 NC_000014.9 velvet.48118 99.93 True fake: scaffold gap size wrong estimation (local) 85143859 85145473 6460 8074 NC_000014.9 velvet.48118 98.64 True fake: scaffold gap size wrong estimation (local) 85145566 85151871 9017 16122 NC_000014.9 velvet.48118 99.94 True fake: scaffold gap size wrong estimation (local) 85152115 85152858 17084 17827 NC_000014.9 velvet.48118 100.0 True local misassembly 85153113 85154225 17828 18940 NC_000014.9 velvet.48118 99.1 True CONTIG velvet.48118 18940 correct CONTIG velvet.48139 304 unaligned CONTIG velvet.48142 249 unaligned CONTIG velvet.48148 779 unaligned CONTIG velvet.48166 293 unaligned CONTIG velvet.48173 457 unaligned CONTIG velvet.48176 279 unaligned CONTIG velvet.48198 279 unaligned 85278059 85278602 1 544 NC_000014.9 velvet.48217 99.63 True CONTIG velvet.48217 544 correct 42482736 42484841 2139 4244 NC_000014.9 velvet.48219 99.86 True fake: scaffold gap size wrong estimation (local) 42485062 42485781 4824 5543 NC_000014.9 velvet.48219 100.0 True CONTIG velvet.48219 6441 correct CONTIG velvet.48270 348 unaligned 19679788 19681104 1 1317 NC_000014.9 velvet.48278 99.7 True CONTIG velvet.48278 1317 correct CONTIG velvet.48333 244 unaligned 95938145 95942743 1 4607 NC_000014.9 velvet.48345 96.63 True CONTIG velvet.48345 38728 correct CONTIG velvet.48347 277 unaligned 52745408 52747801 2394 1 NC_000014.9 velvet.48417 99.96 True fake: scaffold gap size wrong estimation (local) 52744085 52745092 4558 3551 NC_000014.9 velvet.48417 99.9 True fake: scaffold gap size wrong estimation (local) 52741616 52742782 7611 6445 NC_000014.9 velvet.48417 99.14 True fake: scaffold gap size wrong estimation (local) 52740267 52741197 9202 8272 NC_000014.9 velvet.48417 99.89 True CONTIG velvet.48417 11319 correct CONTIG velvet.48438 3598 unaligned 57311741 57318883 1019 9261 NC_000014.9 velvet.48442 99.7 True fake: scaffold gap size wrong estimation (local) 57318969 57320992 9585 11608 NC_000014.9 velvet.48442 99.9 True fake: scaffold gap size wrong estimation (local) 57321227 57324944 12484 16959 NC_000014.9 velvet.48442 97.38 True fake: scaffold gap size wrong estimation (local) 57326074 57327180 18977 20128 NC_000014.9 velvet.48442 99.54 True fake: scaffold gap size wrong estimation (local) 57328119 57329204 21027 22112 NC_000014.9 velvet.48442 99.36 True fake: scaffold gap size wrong estimation (extensive) 57363951 57364451 49044 49544 NC_000014.9 velvet.48442 100.0 True fake: scaffold gap size wrong estimation (local) 57399177 57402924 82952 86699 NC_000014.9 velvet.48442 99.89 True fake: scaffold gap size wrong estimation (local) 57403141 57404075 87783 88746 NC_000014.9 velvet.48442 100.0 True CONTIG velvet.48442 89446 correct CONTIG velvet.48450 217 unaligned CONTIG velvet.48466 457 unaligned CONTIG velvet.48584 380 unaligned 37607628 37608307 1 680 NC_000014.9 velvet.48587 100.0 True CONTIG velvet.48587 680 correct 36771756 36773197 1 1442 NC_000014.9 velvet.48600 99.93 True CONTIG velvet.48600 1442 correct 96745025 96745594 6 575 NC_000014.9 velvet.48651 99.82 True CONTIG velvet.48651 575 correct CONTIG velvet.48711 1139 unaligned CONTIG velvet.48760 297 unaligned 37328286 37331903 4199 1 NC_000014.9 velvet.48771 99.69 True fake: scaffold gap size wrong estimation (local) 37327449 37328006 5999 5442 NC_000014.9 velvet.48771 99.28 True CONTIG velvet.48771 6017 correct CONTIG velvet.48777 288 unaligned CONTIG velvet.48821 239 unaligned 19740575 19741940 458 1829 NC_000014.9 velvet.48872 99.56 True CONTIG velvet.48872 1829 correct CONTIG velvet.48881 215 unaligned CONTIG velvet.48905 444 unaligned 90088331 90089009 7306 6629 NC_000014.9 velvet.48914 99.85 True relocation, scaffold gap is present, inconsistency = 13531491 103620511 103621233 7317 8039 NC_000014.9 velvet.48914 99.86 True fake: scaffold gap size wrong estimation (local) 103623598 103624586 10896 11884 NC_000014.9 velvet.48914 99.8 True fake: scaffold gap size wrong estimation (local) 103624885 103625823 14198 15136 NC_000014.9 velvet.48914 99.89 True fake: scaffold gap size wrong estimation (local) 103625926 103626829 15670 16573 NC_000014.9 velvet.48914 100.0 True fake: scaffold gap size wrong estimation (local) 103627059 103631097 17473 21514 NC_000014.9 velvet.48914 99.31 True fake: scaffold gap size wrong estimation (local) 103655841 103658445 48684 51288 NC_000014.9 velvet.48914 99.92 True relocation, scaffold gap is present, inconsistency = -24078 103646742 103647250 63663 64171 NC_000014.9 velvet.48914 97.84 True fake: scaffold gap size wrong estimation (local) 103651290 103652508 69423 70631 NC_000014.9 velvet.48914 99.01 True fake: scaffold gap size wrong estimation (local) 103652791 103653363 71734 72306 NC_000014.9 velvet.48914 100.0 True fake: scaffold gap size wrong estimation (local) 103653592 103654985 72426 73819 NC_000014.9 velvet.48914 99.93 True relocation, scaffold gap is present, inconsistency = 10144 103675339 103676304 84029 84994 NC_000014.9 velvet.48914 100.0 True fake: scaffold gap size wrong estimation (local) 103679321 103680288 86769 87736 NC_000014.9 velvet.48914 100.0 True local misassembly 103678693 103679302 87958 88567 NC_000014.9 velvet.48914 99.84 True fake: scaffold gap size wrong estimation (extensive) 103688454 103689655 89342 90543 NC_000014.9 velvet.48914 99.83 True fake: scaffold gap size wrong estimation (local) 103690212 103691151 91006 91944 NC_000014.9 velvet.48914 99.89 True fake: scaffold gap size wrong estimation (local) 103692025 103694269 93577 95821 NC_000014.9 velvet.48914 99.55 True fake: scaffold gap size wrong estimation (local) 103694453 103695173 96511 97231 NC_000014.9 velvet.48914 100.0 True fake: scaffold gap size wrong estimation (local) 103695378 103701623 97896 104134 NC_000014.9 velvet.48914 99.66 True relocation, scaffold gap is present, inconsistency = -338106 103363807 103364954 104424 105571 NC_000014.9 velvet.48914 100.0 True fake: scaffold gap size wrong estimation (local) 103367908 103368717 108977 109786 NC_000014.9 velvet.48914 99.88 True relocation, scaffold gap is present, inconsistency = -19620972 83748396 83750533 110437 112669 NC_000014.9 velvet.48914 95.66 True relocation, scaffold gap is present, inconsistency = -15796 83734748 83740598 112680 118592 NC_000014.9 velvet.48914 99.88 True relocation, scaffold gap is present, inconsistency = 36185397 47540547 47549340 127635 118603 NC_000014.9 velvet.48914 98.72 True relocation, scaffold gap is present, inconsistency = 56161537 103710888 103714768 127646 131586 NC_000014.9 velvet.48914 99.66 True fake: scaffold gap size wrong estimation (local) 103714996 103719374 132602 136980 NC_000014.9 velvet.48914 99.86 True fake: scaffold gap size wrong estimation (local) 103719487 103720869 138067 139449 NC_000014.9 velvet.48914 99.93 True fake: scaffold gap size wrong estimation (local) 103720995 103722372 139743 141118 NC_000014.9 velvet.48914 99.78 True fake: scaffold gap size wrong estimation (local) 103722945 103726947 142288 146518 NC_000014.9 velvet.48914 99.97 True relocation, scaffold gap is present, inconsistency = 56202870 47508953 47519010 158474 147583 NC_000014.9 velvet.48914 99.91 True relocation, scaffold gap is present, inconsistency = 56205287 103727246 103731068 161423 165245 NC_000014.9 velvet.48914 99.95 True fake: scaffold gap size wrong estimation (local) 103755081 103756135 194847 195901 NC_000014.9 velvet.48914 99.91 True fake: scaffold gap size wrong estimation (extensive) 103765124 103766007 196648 197531 NC_000014.9 velvet.48914 100.0 True relocation, scaffold gap is present, inconsistency = -9120 103757355 103758972 197999 199616 NC_000014.9 velvet.48914 100.0 True fake: scaffold gap size wrong estimation (local) 103759406 103761172 200963 202729 NC_000014.9 velvet.48914 100.0 True CONTIG velvet.48914 229132 misassembled 93155772 93156381 2989 3598 NC_000014.9 velvet.48932 100.0 True CONTIG velvet.48932 3804 correct CONTIG velvet.48986 343 unaligned CONTIG velvet.49007 239 unaligned CONTIG velvet.49023 341 unaligned 46582447 46583879 1614 182 NC_000014.9 velvet.49030 99.93 True fake: scaffold gap size wrong estimation (local) 46577959 46582099 6226 2086 NC_000014.9 velvet.49030 99.93 True fake: scaffold gap size wrong estimation (local) 46556973 46577655 29358 7221 NC_000014.9 velvet.49030 98.83 True fake: scaffold gap size wrong estimation (local) 46554147 46556787 32950 30323 NC_000014.9 velvet.49030 99.31 True fake: scaffold gap size wrong estimation (local) 46551567 46553441 36290 34416 NC_000014.9 velvet.49030 99.79 True fake: scaffold gap size wrong estimation (local) 46549647 46551209 39074 37512 NC_000014.9 velvet.49030 99.68 True fake: scaffold gap size wrong estimation (local) 46535254 46544020 49004 40244 NC_000014.9 velvet.49030 99.77 True relocation, scaffold gap is present, inconsistency = -14304163 60837362 60838244 51061 50177 NC_000014.9 velvet.49030 99.1 True fake: scaffold gap size wrong estimation (local) 60836560 60837280 51904 51187 NC_000014.9 velvet.49030 98.73 True relocation, scaffold gap is present, inconsistency = 14308635 46507649 46508561 72222 71268 NC_000014.9 velvet.49030 99.89 True fake: scaffold gap size wrong estimation (local) 46503740 46507396 77832 73233 NC_000014.9 velvet.49030 98.41 True fake: scaffold gap size wrong estimation (local) 46499283 46503532 82871 77909 NC_000014.9 velvet.49030 98.96 True fake: scaffold gap size wrong estimation (local) 46474940 46478271 100603 96989 NC_000014.9 velvet.49030 98.59 True fake: scaffold gap size wrong estimation (local) 46467795 46473139 108366 103033 NC_000014.9 velvet.49030 99.63 True fake: scaffold gap size wrong estimation (local) 46466679 46467509 110313 109483 NC_000014.9 velvet.49030 100.0 True fake: scaffold gap size wrong estimation (local) 46465288 46466589 111740 110439 NC_000014.9 velvet.49030 99.85 True fake: scaffold gap size wrong estimation (local) 46461454 46465045 116335 112766 NC_000014.9 velvet.49030 99.3 True fake: scaffold gap size wrong estimation (local) 46459516 46461338 118749 116927 NC_000014.9 velvet.49030 99.78 True indel: indel (<= 5bp) 46456141 46459510 122119 118750 NC_000014.9 velvet.49030 99.35 True fake: scaffold gap size wrong estimation (local) 46454959 46456140 123352 122171 NC_000014.9 velvet.49030 99.83 True indel: indel (<= 5bp) 46453357 46454958 124956 123355 NC_000014.9 velvet.49030 99.19 True local misassembly 46444657 46448736 129036 124957 NC_000014.9 velvet.49030 99.93 True indel: indel (<= 5bp) 46443769 46444655 129923 129037 NC_000014.9 velvet.49030 100.0 True fake: scaffold gap size wrong estimation (local) 46439158 46440244 136251 135165 NC_000014.9 velvet.49030 97.15 True fake: scaffold gap size wrong estimation (local) 46433258 46437131 142791 138893 NC_000014.9 velvet.49030 99.0 True fake: scaffold gap size wrong estimation (local) 46423568 46426760 146720 143527 NC_000014.9 velvet.49030 99.81 True relocation, scaffold gap is present, inconsistency = -8306 46429740 46431708 148854 146886 NC_000014.9 velvet.49030 99.95 True fake: scaffold gap size wrong estimation (local) 46426921 46427634 152414 151701 NC_000014.9 velvet.49030 100.0 True fake: scaffold gap size wrong estimation (local) 46420234 46423282 155880 152425 NC_000014.9 velvet.49030 99.77 True fake: scaffold gap size wrong estimation (local) 46410455 46419019 167099 157672 NC_000014.9 velvet.49030 99.79 True fake: scaffold gap size wrong estimation (local) 46389386 46394922 187381 181119 NC_000014.9 velvet.49030 99.85 True relocation, scaffold gap is present, inconsistency = -20859 46402616 46410232 195937 187394 NC_000014.9 velvet.49030 99.68 True fake: scaffold gap size wrong estimation (local) 46366806 46371785 232824 227850 NC_000014.9 velvet.49030 99.6 True relocation, scaffold gap is present, inconsistency = -2077764 48442909 48443869 234507 233525 NC_000014.9 velvet.49030 97.56 True fake: scaffold gap size wrong estimation (local) 48440563 48442183 237956 236336 NC_000014.9 velvet.49030 99.88 True fake: scaffold gap size wrong estimation (local) 48437878 48438632 241392 240647 NC_000014.9 velvet.49030 98.52 True fake: scaffold gap size wrong estimation (local) 48436171 48437590 243843 242424 NC_000014.9 velvet.49030 98.94 True fake: scaffold gap size wrong estimation (local) 48434420 48436170 248503 246753 NC_000014.9 velvet.49030 99.94 True fake: scaffold gap size wrong estimation (local) 48430800 48434170 253113 249295 NC_000014.9 velvet.49030 99.91 True fake: scaffold gap size wrong estimation (local) 48429153 48430075 255333 254411 NC_000014.9 velvet.49030 99.89 True fake: scaffold gap size wrong estimation (local) 48426797 48428473 258129 256466 NC_000014.9 velvet.49030 99.16 True relocation, scaffold gap is present, inconsistency = 11584 48397775 48399937 275575 273405 NC_000014.9 velvet.49030 99.91 True relocation, scaffold gap is present, inconsistency = -64053 48454400 48460007 283872 277396 NC_000014.9 velvet.49030 99.62 True fake: scaffold gap size wrong estimation (local) 48448159 48453051 291639 285914 NC_000014.9 velvet.49030 99.92 True fake: scaffold gap size wrong estimation (local) 48416823 48426543 319625 309928 NC_000014.9 velvet.49030 99.55 True fake: scaffold gap size wrong estimation (local) 48384232 48397219 349979 336781 NC_000014.9 velvet.49030 99.86 True fake: scaffold gap size wrong estimation (local) 48382736 48383978 352053 350811 NC_000014.9 velvet.49030 99.92 True fake: scaffold gap size wrong estimation (local) 48379595 48382566 355717 352746 NC_000014.9 velvet.49030 100.0 True fake: scaffold gap size wrong estimation (local) 48377547 48379352 358438 356633 NC_000014.9 velvet.49030 99.94 True fake: scaffold gap size wrong estimation (local) 48372365 48377267 364278 359371 NC_000014.9 velvet.49030 99.88 True fake: not a misassembly (possible transposable element) 30411043 30413452 366642 364289 NC_000014.9 velvet.49030 97.29 True fake: not a misassembly (possible transposable element) 48359267 48360383 371569 370453 NC_000014.9 velvet.49030 100.0 True fake: scaffold gap size wrong estimation (local) 48357908 48358955 372714 371667 NC_000014.9 velvet.49030 99.9 True fake: scaffold gap size wrong estimation (local) 48355230 48357613 376326 373943 NC_000014.9 velvet.49030 99.87 True fake: scaffold gap size wrong estimation (local) 48350942 48354910 381806 377373 NC_000014.9 velvet.49030 99.97 True fake: scaffold gap size wrong estimation (local) 48340037 48350761 393378 382658 NC_000014.9 velvet.49030 99.93 True fake: scaffold gap size wrong estimation (local) 48338038 48338540 396168 395666 NC_000014.9 velvet.49030 100.0 True fake: scaffold gap size wrong estimation (local) 48336768 48337492 397474 396750 NC_000014.9 velvet.49030 99.72 True fake: scaffold gap size wrong estimation (local) 48332505 48336041 402687 398139 NC_000014.9 velvet.49030 99.28 True fake: scaffold gap size wrong estimation (local) 48330494 48332181 405318 403631 NC_000014.9 velvet.49030 100.0 True fake: scaffold gap size wrong estimation (local) 48327971 48330225 408499 406245 NC_000014.9 velvet.49030 100.0 True fake: scaffold gap size wrong estimation (local) 48315475 48318842 415792 412418 NC_000014.9 velvet.49030 99.7 True fake: scaffold gap size wrong estimation (local) 48294946 48314009 437753 417967 NC_000014.9 velvet.49030 99.98 True fake: scaffold gap size wrong estimation (local) 48288026 48294359 445351 439018 NC_000014.9 velvet.49030 99.98 True fake: scaffold gap size wrong estimation (local) 48285824 48287244 448466 447057 NC_000014.9 velvet.49030 96.02 True fake: scaffold gap size wrong estimation (local) 48267988 48274635 464818 458171 NC_000014.9 velvet.49030 99.89 True relocation, scaffold gap is present, inconsistency = 18279778 29978240 29985833 474796 467195 NC_000014.9 velvet.49030 99.57 True relocation, scaffold gap is present, inconsistency = -18889306 48863315 48867535 479044 474807 NC_000014.9 velvet.49030 99.29 True relocation, scaffold gap is present, inconsistency = 8150516 40712131 40712788 479055 479712 NC_000014.9 velvet.49030 100.0 True fake: scaffold gap size wrong estimation (local) 40712893 40717648 480555 486177 NC_000014.9 velvet.49030 95.78 True fake: scaffold gap size wrong estimation (local) 40720642 40723852 490443 493653 NC_000014.9 velvet.49030 99.72 True relocation, scaffold gap is present, inconsistency = 5664610 46388473 46389368 494559 493664 NC_000014.9 velvet.49030 100.0 True fake: scaffold gap size wrong estimation (local) 46376120 46388230 507643 495508 NC_000014.9 velvet.49030 99.47 True inversion, scaffold gap is present 46352107 46359896 519378 527993 NC_000014.9 velvet.49030 98.68 True relocation, scaffold gap is present, inconsistency = 342041 46008113 46009710 529946 528349 NC_000014.9 velvet.49030 99.94 True fake: scaffold gap size wrong estimation (local) 46007086 46007755 531411 530742 NC_000014.9 velvet.49030 98.36 True relocation, scaffold gap is present, inconsistency = 5269227 40736063 40737235 533207 532035 NC_000014.9 velvet.49030 99.32 True relocation, scaffold gap is present, inconsistency = -7527235 48237632 48243365 558873 553140 NC_000014.9 velvet.49030 99.98 True fake: scaffold gap size wrong estimation (local) 48231582 48237368 566402 559874 NC_000014.9 velvet.49030 100.0 True inversion, scaffold gap is present 48207593 48217700 576662 586739 NC_000014.9 velvet.49030 99.7 True relocation, scaffold gap is present, inconsistency = 24167339 72385050 72386285 586750 587985 NC_000014.9 velvet.49030 99.76 True fake: scaffold gap size wrong estimation (local) 72386548 72387321 588070 588843 NC_000014.9 velvet.49030 100.0 True fake: scaffold gap size wrong estimation (local) 72387585 72390144 590152 592709 NC_000014.9 velvet.49030 99.88 True relocation, scaffold gap is present, inconsistency = 24180275 48204492 48207299 595527 592720 NC_000014.9 velvet.49030 99.89 True relocation, scaffold gap is present, inconsistency = 1707438 46494546 46497043 595538 598040 NC_000014.9 velvet.49030 99.56 True relocation, scaffold gap is present, inconsistency = 1695730 48193148 48198481 598415 603748 NC_000014.9 velvet.49030 99.96 True fake: scaffold gap size wrong estimation (local) 48199298 48202671 605396 608769 NC_000014.9 velvet.49030 99.94 True fake: scaffold gap size wrong estimation (local) 48218088 48231601 619725 634138 NC_000014.9 velvet.49030 99.33 True fake: scaffold gap size wrong estimation (local) 48260927 48262286 664652 666011 NC_000014.9 velvet.49030 99.93 True CONTIG velvet.49030 669250 misassembled 105701577 105703020 2392 3835 NC_000014.9 velvet.49031 99.93 True CONTIG velvet.49031 3835 correct CONTIG velvet.49042 448 unaligned 49369930 49371050 1121 1 NC_000014.9 velvet.49078 99.82 True CONTIG velvet.49078 1121 correct 39084958 39086387 2481 3873 NC_000014.9 velvet.49084 97.32 True fake: scaffold gap size wrong estimation (local) 39086595 39088376 5058 6839 NC_000014.9 velvet.49084 99.78 True fake: scaffold gap size wrong estimation (local) 39131309 39132279 45230 46200 NC_000014.9 velvet.49084 99.9 True fake: scaffold gap size wrong estimation (local) 39133349 39133912 49788 50351 NC_000014.9 velvet.49084 100.0 True CONTIG velvet.49084 50351 correct 67670770 67671272 1 503 NC_000014.9 velvet.49126 100.0 True CONTIG velvet.49126 3740 correct CONTIG velvet.49143 212 unaligned CONTIG velvet.49154 273 unaligned CONTIG velvet.49179 239 unaligned CONTIG velvet.49187 204 unaligned CONTIG velvet.49217 218 unaligned CONTIG velvet.49218 212 unaligned CONTIG velvet.49253 262 unaligned 63561672 63562212 3545 4085 NC_000014.9 velvet.49283 100.0 True unknown 63564234 63564749 7086 7601 NC_000014.9 velvet.49283 100.0 True unknown 63592729 63593311 39615 40197 NC_000014.9 velvet.49283 100.0 True unknown CONTIG velvet.49283 40441 mis_unaligned 33328661 33330190 1586 1 NC_000014.9 velvet.49362 100.0 True fake: scaffold gap size wrong estimation (local) 33325736 33328426 5329 2639 NC_000014.9 velvet.49362 99.93 True relocation, scaffold gap is present, inconsistency = 36251075 69579512 69580747 5340 6575 NC_000014.9 velvet.49362 99.92 True local misassembly 69578946 69579508 7075 7637 NC_000014.9 velvet.49362 98.05 True relocation, scaffold gap is present, inconsistency = 11314 69591108 69592448 7923 9263 NC_000014.9 velvet.49362 99.85 True relocation, scaffold gap is present, inconsistency = 36268752 33308592 33310283 23027 21336 NC_000014.9 velvet.49362 100.0 True fake: scaffold gap size wrong estimation (local) 33307589 33308496 24612 23705 NC_000014.9 velvet.49362 99.34 True fake: scaffold gap size wrong estimation (local) 33306205 33307588 26091 24708 NC_000014.9 velvet.49362 99.93 True indel: indel (<= 5bp) 33304064 33306204 28233 26093 NC_000014.9 velvet.49362 99.3 True local misassembly 33297225 33298016 29025 28234 NC_000014.9 velvet.49362 99.87 True indel: indel (<= 5bp) 33289825 33297222 36423 29026 NC_000014.9 velvet.49362 99.78 True relocation, scaffold gap is present, inconsistency = 36307900 69605133 69605946 36434 37247 NC_000014.9 velvet.49362 99.88 True indel: indel (<= 5bp) 69605950 69607631 37248 38929 NC_000014.9 velvet.49362 99.94 True local misassembly 69607900 69608454 38930 39484 NC_000014.9 velvet.49362 98.2 True relocation, scaffold gap is present, inconsistency = 36317605 33281575 33289411 48186 40368 NC_000014.9 velvet.49362 99.73 True fake: not a misassembly (possible transposable element) 69612030 69614094 48197 50261 NC_000014.9 velvet.49362 100.0 True fake: not a misassembly (possible transposable element) 33272691 33278467 56064 50291 NC_000014.9 velvet.49362 99.77 True fake: scaffold gap size wrong estimation (local) 33264408 33272357 65144 57196 NC_000014.9 velvet.49362 99.89 True fake: not a misassembly (possible transposable element) 55791296 55791922 65781 65155 NC_000014.9 velvet.49362 100.0 True fake: not a misassembly (possible transposable element) 33252070 33258813 73442 65792 NC_000014.9 velvet.49362 99.88 True relocation, scaffold gap is present, inconsistency = 45423607 78682431 78684694 73453 75710 NC_000014.9 velvet.49362 99.56 True fake: not a misassembly (possible transposable element) 27958424 27964272 81569 75721 NC_000014.9 velvet.49362 99.98 True fake: not a misassembly (possible transposable element) 78685948 78692825 81580 88457 NC_000014.9 velvet.49362 99.94 True relocation, scaffold gap is present, inconsistency = -9052499 69640635 69641626 88766 89757 NC_000014.9 velvet.49362 100.0 True relocation, scaffold gap is present, inconsistency = 13883676 55751673 55756948 95042 89768 NC_000014.9 velvet.49362 99.96 True relocation, scaffold gap is present, inconsistency = 22499618 33249911 33252044 97186 95053 NC_000014.9 velvet.49362 99.91 True indel: indel (> 5bp) 33249345 33249904 97779 97220 NC_000014.9 velvet.49362 98.21 True local misassembly 33247165 33249339 101347 99173 NC_000014.9 velvet.49362 99.54 True relocation, scaffold gap is present, inconsistency = -22518360 55763675 55765279 103197 101593 NC_000014.9 velvet.49362 99.94 True fake: scaffold gap size wrong estimation (local) 55757619 55763452 110041 104138 NC_000014.9 velvet.49362 100.0 True relocation, scaffold gap is present, inconsistency = -20788 55775393 55777024 113055 111424 NC_000014.9 velvet.49362 99.63 True fake: scaffold gap size wrong estimation (local) 55770945 55775216 118129 113859 NC_000014.9 velvet.49362 99.81 True fake: scaffold gap size wrong estimation (local) 55768987 55770737 120808 119058 NC_000014.9 velvet.49362 100.0 True fake: scaffold gap size wrong estimation (local) 55766352 55768717 124278 121724 NC_000014.9 velvet.49362 99.78 True relocation, scaffold gap is present, inconsistency = 22945658 78714386 78719566 124289 129472 NC_000014.9 velvet.49362 99.73 True fake: scaffold gap size wrong estimation (local) 78719834 78726226 130514 137134 NC_000014.9 velvet.49362 99.73 True relocation, scaffold gap is present, inconsistency = -13548 78712865 78713804 137321 138260 NC_000014.9 velvet.49362 99.68 True relocation, scaffold gap is present, inconsistency = 22961457 55745766 55751397 143902 138271 NC_000014.9 velvet.49362 99.89 True fake: scaffold gap size wrong estimation (local) 55742007 55743949 148517 146523 NC_000014.9 velvet.49362 99.95 True fake: scaffold gap size wrong estimation (local) 55738696 55741602 152812 149562 NC_000014.9 velvet.49362 99.79 True fake: scaffold gap size wrong estimation (local) 55736390 55738025 155842 154220 NC_000014.9 velvet.49362 99.08 True relocation, scaffold gap is present, inconsistency = -54898 55790728 55791277 156402 155853 NC_000014.9 velvet.49362 100.0 True fake: scaffold gap size wrong estimation (extensive) 55777719 55779620 160156 158255 NC_000014.9 velvet.49362 99.84 True relocation, scaffold gap is present, inconsistency = 22938521 78727734 78728660 169749 170675 NC_000014.9 velvet.49362 100.0 True fake: scaffold gap size wrong estimation (local) 78728928 78739556 171843 183518 NC_000014.9 velvet.49362 99.86 True fake: scaffold gap size wrong estimation (local) 78739687 78744337 184157 189175 NC_000014.9 velvet.49362 99.93 True relocation, scaffold gap is present, inconsistency = 22994174 55744685 55745502 190003 189186 NC_000014.9 velvet.49362 99.88 True relocation, scaffold gap is present, inconsistency = 12113 55728318 55732561 194249 190014 NC_000014.9 velvet.49362 99.81 True relocation, scaffold gap is present, inconsistency = 23008775 78744419 78752149 197332 205063 NC_000014.9 velvet.49362 99.94 True relocation, scaffold gap is present, inconsistency = -33510726 45241434 45245395 205074 209035 NC_000014.9 velvet.49362 100.0 True CONTIG velvet.49362 209115 misassembled 76138661 76140314 1 1654 NC_000014.9 velvet.49396 99.82 True CONTIG velvet.49396 1654 correct 37364587 37365165 4668 5246 NC_000014.9 velvet.49400 97.75 True CONTIG velvet.49400 6553 correct_unaligned CONTIG velvet.49423 234 unaligned CONTIG velvet.49451 417 unaligned 79343180 79343885 1 706 NC_000014.9 velvet.49469 99.58 True CONTIG velvet.49469 706 correct CONTIG velvet.49482 396 unaligned CONTIG velvet.49483 279 unaligned CONTIG velvet.49494 212 unaligned CONTIG velvet.49593 316 unaligned CONTIG velvet.49649 218 unaligned CONTIG velvet.49652 244 unaligned CONTIG velvet.49666 298 unaligned CONTIG velvet.49675 308 unaligned 98350016 98350929 1 914 NC_000014.9 velvet.49694 99.89 True CONTIG velvet.49694 914 correct 23881027 23883016 1 1990 NC_000014.9 velvet.49705 100.0 True CONTIG velvet.49705 1990 correct CONTIG velvet.49719 245 unaligned CONTIG velvet.49735 485 unaligned 32683170 32684754 1 1585 NC_000014.9 velvet.49763 100.0 True fake: scaffold gap size wrong estimation (local) 32685756 32691595 3333 9490 NC_000014.9 velvet.49763 99.93 True fake: scaffold gap size wrong estimation (local) 32691860 32694106 10468 12714 NC_000014.9 velvet.49763 100.0 True fake: scaffold gap size wrong estimation (local) 32694391 32712972 13746 34111 NC_000014.9 velvet.49763 99.92 True fake: scaffold gap size wrong estimation (local) 32713714 32725017 35664 47667 NC_000014.9 velvet.49763 99.79 True fake: not a misassembly (possible transposable element) 32744932 32748492 48923 52455 NC_000014.9 velvet.49763 99.1 True fake: not a misassembly (possible transposable element) 32728236 32739350 52466 64439 NC_000014.9 velvet.49763 99.85 True fake: scaffold gap size wrong estimation (local) 32739828 32740516 65803 66491 NC_000014.9 velvet.49763 99.13 True fake: scaffold gap size wrong estimation (local) 32741068 32743975 69781 72722 NC_000014.9 velvet.49763 99.51 True fake: scaffold gap size wrong estimation (local) 32771372 32775314 99177 103119 NC_000014.9 velvet.49763 99.95 True fake: scaffold gap size wrong estimation (local) 32775584 32776295 104061 104751 NC_000014.9 velvet.49763 96.87 True fake: scaffold gap size wrong estimation (local) 32776548 32778480 105341 107273 NC_000014.9 velvet.49763 99.79 True fake: scaffold gap size wrong estimation (local) 32803315 32804636 128423 129745 NC_000014.9 velvet.49763 99.7 True fake: scaffold gap size wrong estimation (local) 32804988 32806518 130878 132410 NC_000014.9 velvet.49763 99.54 True fake: scaffold gap size wrong estimation (local) 32807137 32810984 133799 137766 NC_000014.9 velvet.49763 99.76 True fake: scaffold gap size wrong estimation (local) 32811256 32816361 138756 143970 NC_000014.9 velvet.49763 99.74 True fake: scaffold gap size wrong estimation (local) 32816487 32818517 144632 146907 NC_000014.9 velvet.49763 99.14 True fake: scaffold gap size wrong estimation (local) 32850303 32851182 175388 176260 NC_000014.9 velvet.49763 98.97 True relocation, scaffold gap is present, inconsistency = -12927 32838266 32841966 176271 180054 NC_000014.9 velvet.49763 99.54 True fake: scaffold gap size wrong estimation (local) 32842065 32844793 180917 183627 NC_000014.9 velvet.49763 99.12 True fake: scaffold gap size wrong estimation (local) 32844959 32848873 184598 188512 NC_000014.9 velvet.49763 99.87 True fake: scaffold gap size wrong estimation (local) 32848963 32850105 189525 190640 NC_000014.9 velvet.49763 97.18 True fake: scaffold gap size wrong estimation (local) 32864128 32871825 201590 209294 NC_000014.9 velvet.49763 99.82 True relocation, scaffold gap is present, inconsistency = 41015 32916054 32921997 218776 212508 NC_000014.9 velvet.49763 99.71 True fake: scaffold gap size wrong estimation (local) 32910444 32915604 225947 219947 NC_000014.9 velvet.49763 99.9 True fake: scaffold gap size wrong estimation (local) 32909251 32910193 227970 227028 NC_000014.9 velvet.49763 99.58 True relocation, scaffold gap is present, inconsistency = 14500 32876578 32877425 245296 246151 NC_000014.9 velvet.49763 99.76 True fake: not a misassembly (possible transposable element) 32877504 32878188 248124 247440 NC_000014.9 velvet.49763 100.0 True fake: not a misassembly (possible transposable element) 32878597 32880103 248135 249645 NC_000014.9 velvet.49763 99.6 True inversion, scaffold gap is present 32875930 32876505 250667 250092 NC_000014.9 velvet.49763 99.83 True relocation, scaffold gap is present, inconsistency = -7113 32881183 32883032 252527 250678 NC_000014.9 velvet.49763 99.46 True inversion, scaffold gap is present 32883332 32887681 254843 259886 NC_000014.9 velvet.49763 99.91 True CONTIG velvet.49763 260147 misassembled CONTIG velvet.49802 453 unaligned CONTIG velvet.49819 253 unaligned CONTIG velvet.49874 236 unaligned 91297629 91298184 556 1 NC_000014.9 velvet.49907 99.82 True CONTIG velvet.49907 556 correct 27238180 27239820 1 1619 NC_000014.9 velvet.49937 98.47 True fake: scaffold gap size wrong estimation (local) 27241125 27244183 3748 6806 NC_000014.9 velvet.49937 99.87 True CONTIG velvet.49937 6806 correct CONTIG velvet.49939 218 unaligned CONTIG velvet.49982 215 unaligned CONTIG velvet.49991 211 unaligned 59724727 59728260 3534 1 NC_000014.9 velvet.49995 100.0 True fake: scaffold gap size wrong estimation (local) 59723619 59724579 5168 4208 NC_000014.9 velvet.49995 100.0 True fake: scaffold gap size wrong estimation (local) 59720725 59722781 8534 6478 NC_000014.9 velvet.49995 100.0 True relocation, scaffold gap is present, inconsistency = 108819 59837780 59841468 14714 18402 NC_000014.9 velvet.49995 99.95 True fake: scaffold gap size wrong estimation (local) 59842177 59848955 19859 26637 NC_000014.9 velvet.49995 99.9 True relocation, scaffold gap is present, inconsistency = 141220 59687154 59700946 41325 26648 NC_000014.9 velvet.49995 99.58 True fake: scaffold gap size wrong estimation (extensive) 59657673 59658172 62192 61693 NC_000014.9 velvet.49995 98.0 True fake: scaffold gap size wrong estimation (local) 59654524 59657121 66179 63582 NC_000014.9 velvet.49995 99.96 True fake: scaffold gap size wrong estimation (local) 59652336 59654143 69213 67412 NC_000014.9 velvet.49995 95.02 True fake: scaffold gap size wrong estimation (local) 59650386 59651218 72479 71652 NC_000014.9 velvet.49995 99.39 True fake: scaffold gap size wrong estimation (local) 59643487 59647036 81245 77629 NC_000014.9 velvet.49995 98.58 True fake: scaffold gap size wrong estimation (local) 59641644 59643229 83880 82297 NC_000014.9 velvet.49995 99.81 True CONTIG velvet.49995 84801 misassembled CONTIG velvet.50019 427 unaligned 71114947 71115658 1 712 NC_000014.9 velvet.50025 99.86 True CONTIG velvet.50025 712 correct 106171299 106171922 1 624 NC_000014.9 velvet.50027 99.52 True fake: scaffold gap size wrong estimation (local) 106174181 106174703 3639 4161 NC_000014.9 velvet.50027 99.43 True CONTIG velvet.50027 4161 correct CONTIG velvet.50031 223 unaligned 100621655 100625363 3661 1 NC_000014.9 velvet.50046 98.71 True local misassembly 100625339 100627352 6844 4831 NC_000014.9 velvet.50046 100.0 True fake: scaffold gap size wrong estimation (local) 100617455 100621225 10625 6855 NC_000014.9 velvet.50046 99.95 True fake: scaffold gap size wrong estimation (local) 100601741 100611394 22475 12133 NC_000014.9 velvet.50046 99.32 True fake: scaffold gap size wrong estimation (local) 100600756 100601609 23387 22486 NC_000014.9 velvet.50046 100.0 True fake: scaffold gap size wrong estimation (local) 100598347 100600531 26459 24275 NC_000014.9 velvet.50046 99.86 True fake: scaffold gap size wrong estimation (local) 100597161 100597937 28003 27227 NC_000014.9 velvet.50046 99.87 True fake: scaffold gap size wrong estimation (local) 100587495 100596233 38278 29538 NC_000014.9 velvet.50046 99.82 True fake: scaffold gap size wrong estimation (local) 100585445 100587225 41214 39434 NC_000014.9 velvet.50046 100.0 True fake: scaffold gap size wrong estimation (local) 100579133 100580001 44719 43851 NC_000014.9 velvet.50046 99.77 True fake: scaffold gap size wrong estimation (local) 100568947 100578848 55679 45756 NC_000014.9 velvet.50046 99.18 True fake: scaffold gap size wrong estimation (local) 100561588 100568048 63742 57339 NC_000014.9 velvet.50046 99.01 True fake: scaffold gap size wrong estimation (local) 100557139 100561466 69013 64623 NC_000014.9 velvet.50046 99.93 True fake: scaffold gap size wrong estimation (local) 100556336 100557055 69836 69117 NC_000014.9 velvet.50046 100.0 True CONTIG velvet.50046 69836 correct CONTIG velvet.50073 408 unaligned 55113173 55113801 1 629 NC_000014.9 velvet.50077 100.0 True CONTIG velvet.50077 629 correct 45915730 45920177 1 4448 NC_000014.9 velvet.50092 99.89 True fake: scaffold gap size wrong estimation (local) 45923883 45925712 4459 6288 NC_000014.9 velvet.50092 99.95 True relocation, scaffold gap is present, inconsistency = -12104 45913890 45915425 6570 8105 NC_000014.9 velvet.50092 100.0 True fake: scaffold gap size wrong estimation (local) 45920304 45923641 8116 11453 NC_000014.9 velvet.50092 99.94 True fake: scaffold gap size wrong estimation (local) 45929126 45932682 17988 22543 NC_000014.9 velvet.50092 99.22 True fake: scaffold gap size wrong estimation (local) 45933110 45933759 23797 24455 NC_000014.9 velvet.50092 100.0 True fake: scaffold gap size wrong estimation (extensive) 45936231 45937317 34994 36072 NC_000014.9 velvet.50092 98.98 True CONTIG velvet.50092 36072 misassembled 29268769 29269442 674 1 NC_000014.9 velvet.50142 99.85 True CONTIG velvet.50142 674 correct CONTIG velvet.50205 203 unaligned CONTIG velvet.50268 230 unaligned CONTIG velvet.50292 201 unaligned 98758464 98759602 1 1139 NC_000014.9 velvet.50302 100.0 True inversion, scaffold gap is present 98751281 98753687 3556 1150 NC_000014.9 velvet.50302 100.0 True inversion, scaffold gap is present 98753740 98758207 3567 8093 NC_000014.9 velvet.50302 100.0 True fake: scaffold gap size wrong estimation (local) 98765154 98769912 12076 16834 NC_000014.9 velvet.50302 100.0 True relocation, scaffold gap is present, inconsistency = -10311 98759612 98764901 16845 22134 NC_000014.9 velvet.50302 99.94 True fake: scaffold gap size wrong estimation (local) 98769977 98777420 22145 29587 NC_000014.9 velvet.50302 99.92 True fake: scaffold gap size wrong estimation (local) 98777884 98780971 30855 33883 NC_000014.9 velvet.50302 98.05 True relocation, scaffold gap is present, inconsistency = 56787 98718383 98721086 36597 33894 NC_000014.9 velvet.50302 100.0 True fake: scaffold gap size wrong estimation (local) 98714496 98718139 41261 37618 NC_000014.9 velvet.50302 99.97 True relocation, scaffold gap is present, inconsistency = 61958 98781352 98787467 42516 48801 NC_000014.9 velvet.50302 99.47 True fake: scaffold gap size wrong estimation (local) 98794023 98794955 50560 51492 NC_000014.9 velvet.50302 100.0 True relocation, scaffold gap is present, inconsistency = 85203 98707239 98708189 53073 52123 NC_000014.9 velvet.50302 100.0 True fake: scaffold gap size wrong estimation (local) 98699274 98707035 61870 53866 NC_000014.9 velvet.50302 99.38 True fake: scaffold gap size wrong estimation (local) 98691974 98699126 70235 62772 NC_000014.9 velvet.50302 99.78 True fake: scaffold gap size wrong estimation (local) 98687260 98691685 75737 71312 NC_000014.9 velvet.50302 99.93 True fake: scaffold gap size wrong estimation (local) 98675427 98676731 84388 83084 NC_000014.9 velvet.50302 99.92 True fake: scaffold gap size wrong estimation (local) 98665564 98675217 95861 85384 NC_000014.9 velvet.50302 99.16 True fake: scaffold gap size wrong estimation (local) 98664687 98665303 97360 96744 NC_000014.9 velvet.50302 99.51 True fake: scaffold gap size wrong estimation (local) 98660767 98661291 100819 100295 NC_000014.9 velvet.50302 99.62 True fake: not a misassembly (possible transposable element) 98848953 98849608 100830 101485 NC_000014.9 velvet.50302 100.0 True fake: not a misassembly (possible transposable element) 98653873 98655871 103494 101496 NC_000014.9 velvet.50302 99.95 True fake: scaffold gap size wrong estimation (local) 98649884 98653617 108211 104407 NC_000014.9 velvet.50302 99.87 True fake: scaffold gap size wrong estimation (local) 98645394 98649684 113526 109236 NC_000014.9 velvet.50302 100.0 True fake: scaffold gap size wrong estimation (local) 98636143 98645193 123554 114504 NC_000014.9 velvet.50302 99.96 True fake: scaffold gap size wrong estimation (local) 98633985 98636018 126437 124404 NC_000014.9 velvet.50302 99.9 True fake: scaffold gap size wrong estimation (local) 98621531 98633678 139449 127302 NC_000014.9 velvet.50302 99.89 True fake: scaffold gap size wrong estimation (local) 98620770 98621530 140265 139505 NC_000014.9 velvet.50302 97.37 True fake: scaffold gap size wrong estimation (local) 98617854 98620545 146056 143365 NC_000014.9 velvet.50302 99.85 True fake: not a misassembly (possible transposable element) 56535788 56536784 147063 146067 NC_000014.9 velvet.50302 99.9 True fake: not a misassembly (possible transposable element) 98616131 98617769 148712 147074 NC_000014.9 velvet.50302 100.0 True fake: scaffold gap size wrong estimation (local) 98614586 98615835 150840 149591 NC_000014.9 velvet.50302 99.92 True fake: scaffold gap size wrong estimation (local) 98609857 98614331 156106 151632 NC_000014.9 velvet.50302 99.82 True relocation, scaffold gap is present, inconsistency = 47489 98560962 98562103 156371 157512 NC_000014.9 velvet.50302 99.91 True fake: scaffold gap size wrong estimation (local) 98562257 98584591 158212 180826 NC_000014.9 velvet.50302 99.8 True fake: scaffold gap size wrong estimation (local) 98584685 98588193 181518 185026 NC_000014.9 velvet.50302 99.63 True relocation, scaffold gap is present, inconsistency = 8250 98598330 98599936 188519 186913 NC_000014.9 velvet.50302 99.94 True fake: scaffold gap size wrong estimation (local) 98594848 98595976 189658 188530 NC_000014.9 velvet.50302 99.82 True local misassembly 98597674 98598275 190270 189669 NC_000014.9 velvet.50302 99.5 True fake: scaffold gap size wrong estimation (local) 98591880 98594574 193526 190774 NC_000014.9 velvet.50302 99.89 True fake: scaffold gap size wrong estimation (local) 98589854 98591798 196802 194858 NC_000014.9 velvet.50302 99.69 True relocation, scaffold gap is present, inconsistency = 26160908 72425402 72428935 200346 196813 NC_000014.9 velvet.50302 99.92 True fake: scaffold gap size wrong estimation (local) 72422249 72423589 204251 202911 NC_000014.9 velvet.50302 100.0 True local misassembly 72423595 72425147 205814 204262 NC_000014.9 velvet.50302 99.94 True fake: scaffold gap size wrong estimation (local) 72418439 72422143 210183 206377 NC_000014.9 velvet.50302 99.92 True fake: scaffold gap size wrong estimation (local) 72416136 72418153 213329 211312 NC_000014.9 velvet.50302 99.9 True relocation, scaffold gap is present, inconsistency = 11038 72429202 72430009 213340 214146 NC_000014.9 velvet.50302 99.88 True relocation, scaffold gap is present, inconsistency = 26169809 98600454 98600982 214782 215311 NC_000014.9 velvet.50302 99.81 True fake: scaffold gap size wrong estimation (local) 98601254 98606425 216426 221597 NC_000014.9 velvet.50302 99.86 True fake: scaffold gap size wrong estimation (local) 98606447 98609867 222707 226127 NC_000014.9 velvet.50302 99.56 True relocation, scaffold gap is present, inconsistency = -42075491 56534387 56535410 226138 227161 NC_000014.9 velvet.50302 99.9 True relocation, scaffold gap is present, inconsistency = 15832407 72390369 72391237 250581 249713 NC_000014.9 velvet.50302 100.0 True fake: scaffold gap size wrong estimation (local) 72380109 72384741 256988 251791 NC_000014.9 velvet.50302 99.83 True relocation, scaffold gap is present, inconsistency = -15316 72392112 72394192 260301 258221 NC_000014.9 velvet.50302 99.95 True relocation, scaffold gap is present, inconsistency = 18174267 54209992 54214166 263980 268154 NC_000014.9 velvet.50302 99.88 True fake: scaffold gap size wrong estimation (local) 54214448 54215827 269210 270589 NC_000014.9 velvet.50302 99.93 True indel: indel (> 5bp) 54215863 54217193 270590 271920 NC_000014.9 velvet.50302 98.5 True local misassembly 54217194 54222223 274589 279618 NC_000014.9 velvet.50302 99.78 True fake: scaffold gap size wrong estimation (local) 54222224 54227015 279783 284574 NC_000014.9 velvet.50302 99.31 True relocation, inconsistency = 18134192 72361208 72364003 287370 284575 NC_000014.9 velvet.50302 99.89 True fake: scaffold gap size wrong estimation (local) 72358806 72360250 291771 290327 NC_000014.9 velvet.50302 98.96 True fake: scaffold gap size wrong estimation (local) 72355433 72356262 295854 295025 NC_000014.9 velvet.50302 100.0 True CONTIG velvet.50302 298278 misassembled CONTIG velvet.50430 276 unaligned CONTIG velvet.50462 389 unaligned CONTIG velvet.50467 296 unaligned 105636843 105637458 1 616 NC_000014.9 velvet.50519 100.0 True CONTIG velvet.50519 616 correct CONTIG velvet.50555 404 unaligned CONTIG velvet.50559 323 unaligned 106706516 106708609 1 2101 NC_000014.9 velvet.50668 99.76 True relocation, scaffold gap is present, inconsistency = -143649 106604893 106605433 42034 42574 NC_000014.9 velvet.50668 99.82 True inversion, scaffold gap is present 106597308 106598118 43893 43083 NC_000014.9 velvet.50668 99.51 True indel: indel (> 5bp) 106596462 106597307 44746 43901 NC_000014.9 velvet.50668 98.46 True local misassembly 106595787 106596316 45276 44747 NC_000014.9 velvet.50668 99.62 True relocation, scaffold gap is present, inconsistency = 179152 106781231 106782287 51039 52095 NC_000014.9 velvet.50668 99.53 True fake: scaffold gap size wrong estimation (local) 106782288 106782886 52376 52974 NC_000014.9 velvet.50668 99.83 True fake: scaffold gap size wrong estimation (local) 106785357 106786042 58144 58829 NC_000014.9 velvet.50668 100.0 True local misassembly 106784473 106785325 58840 59693 NC_000014.9 velvet.50668 99.65 True fake: scaffold gap size wrong estimation (local) 106786589 106788203 61747 63317 NC_000014.9 velvet.50668 97.0 True fake: scaffold gap size wrong estimation (local) 106789154 106790666 65410 66922 NC_000014.9 velvet.50668 100.0 True fake: scaffold gap size wrong estimation (local) 106790817 106794894 68087 72050 NC_000014.9 velvet.50668 95.27 True fake: scaffold gap size wrong estimation (local) 106795567 106796693 73497 74623 NC_000014.9 velvet.50668 100.0 True fake: scaffold gap size wrong estimation (local) 106798332 106799385 77021 78073 NC_000014.9 velvet.50668 99.91 True fake: scaffold gap size wrong estimation (local) 106799408 106802660 81266 84517 NC_000014.9 velvet.50668 99.91 True fake: scaffold gap size wrong estimation (local) 106829969 106830843 111763 112637 NC_000014.9 velvet.50668 99.89 True local misassembly 106831358 106833945 112638 115225 NC_000014.9 velvet.50668 99.81 True indel: indel (> 5bp) 106833946 106835439 115233 116726 NC_000014.9 velvet.50668 99.67 True fake: scaffold gap size wrong estimation (local) 106835440 106836723 116776 118059 NC_000014.9 velvet.50668 98.29 True CONTIG velvet.50668 118059 misassembled CONTIG velvet.50700 244 unaligned CONTIG velvet.50701 305 unaligned 57330378 57331454 1 1077 NC_000014.9 velvet.50712 99.26 True CONTIG velvet.50712 1077 correct CONTIG velvet.50795 408 unaligned CONTIG velvet.50856 247 unaligned CONTIG velvet.50869 243 unaligned CONTIG velvet.50873 204 unaligned 84508226 84509637 1405 1 NC_000014.9 velvet.50874 99.29 True fake: scaffold gap size wrong estimation (local) 84505946 84507084 4697 3559 NC_000014.9 velvet.50874 99.91 True fake: scaffold gap size wrong estimation (local) 84489607 84493910 16539 12236 NC_000014.9 velvet.50874 99.93 True fake: scaffold gap size wrong estimation (local) 84488775 84489329 17861 17307 NC_000014.9 velvet.50874 100.0 True fake: scaffold gap size wrong estimation (local) 84484698 84486246 22446 20898 NC_000014.9 velvet.50874 99.87 True fake: scaffold gap size wrong estimation (local) 84482153 84484453 25847 23558 NC_000014.9 velvet.50874 99.48 True relocation, scaffold gap is present, inconsistency = -21020 84480630 84482128 48509 46892 NC_000014.9 velvet.50874 99.93 True fake: scaffold gap size wrong estimation (local) 84477786 84480365 52015 49436 NC_000014.9 velvet.50874 99.96 True fake: scaffold gap size wrong estimation (local) 84471592 84477604 59567 52969 NC_000014.9 velvet.50874 99.95 True fake: scaffold gap size wrong estimation (local) 84468259 84471338 63433 60354 NC_000014.9 velvet.50874 99.94 True fake: scaffold gap size wrong estimation (local) 84463172 84466459 70219 66932 NC_000014.9 velvet.50874 100.0 True fake: scaffold gap size wrong estimation (local) 84455278 84462897 79425 71264 NC_000014.9 velvet.50874 99.96 True fake: scaffold gap size wrong estimation (extensive) 84443953 84447369 82817 79436 NC_000014.9 velvet.50874 98.89 True relocation, scaffold gap is present, inconsistency = -11057 84452534 84454999 85273 82828 NC_000014.9 velvet.50874 99.14 True fake: scaffold gap size wrong estimation (local) 84450575 84452244 87926 86257 NC_000014.9 velvet.50874 99.88 True fake: scaffold gap size wrong estimation (local) 84447392 84450186 92212 88879 NC_000014.9 velvet.50874 99.6 True fake: scaffold gap size wrong estimation (local) 84441931 84443699 94374 92606 NC_000014.9 velvet.50874 99.83 True fake: scaffold gap size wrong estimation (local) 84440641 84441736 96438 95343 NC_000014.9 velvet.50874 99.73 True fake: scaffold gap size wrong estimation (local) 84439056 84440354 101340 100042 NC_000014.9 velvet.50874 100.0 True fake: scaffold gap size wrong estimation (local) 84433689 84438750 108108 102260 NC_000014.9 velvet.50874 99.34 True fake: scaffold gap size wrong estimation (local) 84429574 84433402 113028 109099 NC_000014.9 velvet.50874 99.95 True fake: scaffold gap size wrong estimation (local) 84413406 84429301 130153 114084 NC_000014.9 velvet.50874 99.85 True fake: scaffold gap size wrong estimation (local) 84411715 84412916 132211 131010 NC_000014.9 velvet.50874 99.83 True fake: scaffold gap size wrong estimation (local) 84402371 84411468 143099 133005 NC_000014.9 velvet.50874 99.49 True fake: scaffold gap size wrong estimation (local) 84399913 84402232 146360 144041 NC_000014.9 velvet.50874 99.87 True fake: scaffold gap size wrong estimation (local) 84391914 84398126 155301 149089 NC_000014.9 velvet.50874 99.92 True fake: scaffold gap size wrong estimation (local) 84390962 84391700 156748 156010 NC_000014.9 velvet.50874 100.0 True fake: scaffold gap size wrong estimation (local) 84388071 84390309 165058 162820 NC_000014.9 velvet.50874 98.7 True fake: scaffold gap size wrong estimation (local) 84386535 84388070 166759 165224 NC_000014.9 velvet.50874 100.0 True indel: indel (<= 5bp) 84383742 84386533 169551 166760 NC_000014.9 velvet.50874 99.82 True indel: indel (<= 5bp) 84382618 84383741 170676 169553 NC_000014.9 velvet.50874 99.91 True fake: scaffold gap size wrong estimation (local) 84380482 84382617 172947 170812 NC_000014.9 velvet.50874 99.11 True fake: scaffold gap size wrong estimation (local) 84366152 84376174 183067 172958 NC_000014.9 velvet.50874 99.89 True fake: scaffold gap size wrong estimation (local) 84364331 84365912 185516 183935 NC_000014.9 velvet.50874 99.68 True fake: scaffold gap size wrong estimation (local) 84360225 84364056 189778 185947 NC_000014.9 velvet.50874 99.87 True fake: scaffold gap size wrong estimation (local) 84354016 84359532 197468 191244 NC_000014.9 velvet.50874 96.58 True fake: scaffold gap size wrong estimation (local) 84345231 84352830 207040 199446 NC_000014.9 velvet.50874 99.8 True fake: scaffold gap size wrong estimation (local) 84341472 84345075 211434 207967 NC_000014.9 velvet.50874 96.17 True fake: scaffold gap size wrong estimation (local) 84339265 84340163 214282 213384 NC_000014.9 velvet.50874 98.89 True local misassembly 84337309 84339001 215975 214283 NC_000014.9 velvet.50874 99.82 True local misassembly 84340195 84341469 217260 215986 NC_000014.9 velvet.50874 99.84 True fake: scaffold gap size wrong estimation (local) 84331380 84337187 223173 217271 NC_000014.9 velvet.50874 99.84 True fake: scaffold gap size wrong estimation (local) 84330431 84331230 224707 223908 NC_000014.9 velvet.50874 100.0 True fake: scaffold gap size wrong estimation (local) 84328509 84330144 226775 225140 NC_000014.9 velvet.50874 99.63 True fake: scaffold gap size wrong estimation (local) 84320235 84327754 235797 228308 NC_000014.9 velvet.50874 99.51 True fake: scaffold gap size wrong estimation (local) 84313718 84319814 243787 236929 NC_000014.9 velvet.50874 99.54 True inversion, scaffold gap is present 84307444 84308046 243798 244400 NC_000014.9 velvet.50874 100.0 True relocation, scaffold gap is present, inconsistency = -32931658 51377757 51378306 245769 246318 NC_000014.9 velvet.50874 99.64 True relocation, scaffold gap is present, inconsistency = 32931179 84310791 84313012 249843 247624 NC_000014.9 velvet.50874 99.77 True fake: scaffold gap size wrong estimation (local) 84308120 84310705 252738 250153 NC_000014.9 velvet.50874 100.0 True fake: scaffold gap size wrong estimation (local) 84304539 84307410 257075 254214 NC_000014.9 velvet.50874 99.58 True fake: scaffold gap size wrong estimation (local) 84292537 84304291 270144 258013 NC_000014.9 velvet.50874 99.85 True fake: scaffold gap size wrong estimation (local) 84281822 84284268 275066 272620 NC_000014.9 velvet.50874 99.96 True relocation, scaffold gap is present, inconsistency = -10459 84284640 84292270 282763 275077 NC_000014.9 velvet.50874 99.83 True fake: scaffold gap size wrong estimation (local) 84277169 84281796 287279 282774 NC_000014.9 velvet.50874 97.27 True fake: scaffold gap size wrong estimation (local) 84274089 84276731 291040 288397 NC_000014.9 velvet.50874 99.96 True fake: scaffold gap size wrong estimation (local) 84269542 84273798 296320 292064 NC_000014.9 velvet.50874 99.98 True fake: scaffold gap size wrong estimation (local) 84267269 84269273 299450 297446 NC_000014.9 velvet.50874 99.9 True fake: scaffold gap size wrong estimation (local) 84266635 84267160 300107 299582 NC_000014.9 velvet.50874 99.81 True fake: scaffold gap size wrong estimation (local) 84261312 84266357 306211 301166 NC_000014.9 velvet.50874 99.9 True fake: scaffold gap size wrong estimation (local) 84243100 84261021 327290 307415 NC_000014.9 velvet.50874 96.85 True fake: scaffold gap size wrong estimation (local) 84234309 84238789 333079 328598 NC_000014.9 velvet.50874 99.89 True relocation, scaffold gap is present, inconsistency = -8237 84241566 84242535 334097 333090 NC_000014.9 velvet.50874 99.89 True fake: scaffold gap size wrong estimation (local) 84239689 84240286 336768 336174 NC_000014.9 velvet.50874 98.81 True local misassembly 84240453 84241539 338972 337886 NC_000014.9 velvet.50874 99.91 True fake: scaffold gap size wrong estimation (local) 84225039 84234060 348291 339272 NC_000014.9 velvet.50874 99.89 True fake: scaffold gap size wrong estimation (local) 84220703 84224910 353562 349208 NC_000014.9 velvet.50874 100.0 True fake: not a misassembly (possible transposable element) 64602838 64604084 353573 354819 NC_000014.9 velvet.50874 100.0 True fake: not a misassembly (possible transposable element) 84219837 84220564 355557 354830 NC_000014.9 velvet.50874 100.0 True fake: scaffold gap size wrong estimation (local) 84213837 84219562 362106 356381 NC_000014.9 velvet.50874 99.97 True fake: scaffold gap size wrong estimation (local) 84210013 84213584 367766 363086 NC_000014.9 velvet.50874 99.94 True fake: scaffold gap size wrong estimation (local) 84207928 84209867 369695 367777 NC_000014.9 velvet.50874 98.86 True relocation, scaffold gap is present, inconsistency = 9423 84192479 84193424 374776 375753 NC_000014.9 velvet.50874 96.63 True inversion, scaffold gap is present 84193400 84195121 378888 377214 NC_000014.9 velvet.50874 96.62 True relocation, scaffold gap is present, inconsistency = -13572 84206142 84206961 379718 378899 NC_000014.9 velvet.50874 100.0 True fake: scaffold gap size wrong estimation (local) 84205167 84205955 381207 380419 NC_000014.9 velvet.50874 100.0 True fake: scaffold gap size wrong estimation (local) 84203246 84205049 383108 381305 NC_000014.9 velvet.50874 99.83 True fake: scaffold gap size wrong estimation (local) 84197610 84203111 389505 384004 NC_000014.9 velvet.50874 99.84 True relocation, scaffold gap is present, inconsistency = 19553982 64638686 64639228 394447 393905 NC_000014.9 velvet.50874 100.0 True relocation, scaffold gap is present, inconsistency = 31617824 33018937 33020766 396372 394543 NC_000014.9 velvet.50874 99.95 True relocation, scaffold gap is present, inconsistency = 31611062 64631839 64632919 396383 397463 NC_000014.9 velvet.50874 100.0 True fake: scaffold gap size wrong estimation (local) 64633219 64635591 398412 400784 NC_000014.9 velvet.50874 100.0 True fake: scaffold gap size wrong estimation (local) 64635781 64638463 401861 404475 NC_000014.9 velvet.50874 97.37 True fake: scaffold gap size wrong estimation (local) 64656798 64657377 421338 421923 NC_000014.9 velvet.50874 98.98 True fake: scaffold gap size wrong estimation (local) 64660115 64661280 425065 426229 NC_000014.9 velvet.50874 99.74 True fake: scaffold gap size wrong estimation (local) 64662765 64663800 428444 429515 NC_000014.9 velvet.50874 100.0 True fake: scaffold gap size wrong estimation (local) 64664994 64665900 431931 432837 NC_000014.9 velvet.50874 99.89 True relocation, scaffold gap is present, inconsistency = -7939 64661575 64662104 436451 436980 NC_000014.9 velvet.50874 99.81 True fake: scaffold gap size wrong estimation (local) 64664071 64664703 439824 440456 NC_000014.9 velvet.50874 99.68 True relocation, scaffold gap is present, inconsistency = 19513474 84178188 84192352 455398 440467 NC_000014.9 velvet.50874 99.94 True fake: scaffold gap size wrong estimation (local) 84175983 84177893 458326 456416 NC_000014.9 velvet.50874 99.9 True fake: scaffold gap size wrong estimation (local) 84159114 84175696 476667 459302 NC_000014.9 velvet.50874 99.9 True fake: scaffold gap size wrong estimation (local) 84156995 84159012 479484 477466 NC_000014.9 velvet.50874 99.85 True fake: scaffold gap size wrong estimation (local) 84155836 84156703 481268 480401 NC_000014.9 velvet.50874 100.0 True fake: scaffold gap size wrong estimation (local) 84144769 84150559 487069 481279 NC_000014.9 velvet.50874 99.84 True local misassembly 84143713 84144689 488250 487274 NC_000014.9 velvet.50874 99.9 True fake: scaffold gap size wrong estimation (local) 84141766 84143464 490899 489201 NC_000014.9 velvet.50874 99.76 True relocation, scaffold gap is present, inconsistency = -12621 84151024 84154376 494265 490910 NC_000014.9 velvet.50874 99.76 True fake: scaffold gap size wrong estimation (extensive) 84134593 84141373 505406 496833 NC_000014.9 velvet.50874 99.79 True relocation, scaffold gap is present, inconsistency = 13812 84107137 84115065 521370 511122 NC_000014.9 velvet.50874 96.23 True fake: scaffold gap size wrong estimation (local) 84101801 84106535 527810 522965 NC_000014.9 velvet.50874 96.64 True fake: scaffold gap size wrong estimation (local) 84070901 84079494 555942 546547 NC_000014.9 velvet.50874 99.96 True fake: scaffold gap size wrong estimation (local) 84065818 84070334 561911 557177 NC_000014.9 velvet.50874 99.93 True relocation, scaffold gap is present, inconsistency = 38197574 45866098 45868233 564021 561922 NC_000014.9 velvet.50874 98.07 True inversion, scaffold gap is present 45868266 45869012 565030 565776 NC_000014.9 velvet.50874 99.73 True fake: not a misassembly (possible transposable element) 84079804 84083636 566814 570750 NC_000014.9 velvet.50874 99.18 True fake: not a misassembly (possible transposable element) 45872374 45872922 572095 572643 NC_000014.9 velvet.50874 99.82 True fake: scaffold gap size wrong estimation (local) 45874063 45874951 573723 574611 NC_000014.9 velvet.50874 98.76 True relocation, scaffold gap is present, inconsistency = 37429 45912391 45913858 576092 574622 NC_000014.9 velvet.50874 99.93 True fake: scaffold gap size wrong estimation (local) 45908578 45912172 580527 576933 NC_000014.9 velvet.50874 99.94 True fake: scaffold gap size wrong estimation (local) 45905410 45908299 584456 581567 NC_000014.9 velvet.50874 100.0 True fake: scaffold gap size wrong estimation (local) 45888906 45905143 602887 585484 NC_000014.9 velvet.50874 99.54 True fake: scaffold gap size wrong estimation (local) 45874953 45876285 614209 612877 NC_000014.9 velvet.50874 99.77 True inversion, scaffold gap is present 45876336 45879386 614220 617324 NC_000014.9 velvet.50874 99.8 True relocation, scaffold gap is present, inconsistency = 7763 45862597 45865981 624281 619916 NC_000014.9 velvet.50874 99.82 True relocation, scaffold gap is present, inconsistency = -55844746 101702975 101704769 628688 626855 NC_000014.9 velvet.50874 100.0 True fake: scaffold gap size wrong estimation (local) 101699376 101700487 629790 628699 NC_000014.9 velvet.50874 97.82 True relocation, scaffold gap is present, inconsistency = 55837777 45845730 45861468 647030 629921 NC_000014.9 velvet.50874 98.25 True fake: scaffold gap size wrong estimation (local) 45841534 45844070 651747 649211 NC_000014.9 velvet.50874 100.0 True relocation, scaffold gap is present, inconsistency = -28110 45869006 45869633 652385 651758 NC_000014.9 velvet.50874 99.52 True CONTIG velvet.50874 652385 misassembled 70322509 70324695 4389 2159 NC_000014.9 velvet.50880 99.77 True relocation, scaffold gap is present, inconsistency = 34612097 35709180 35710296 4505 5621 NC_000014.9 velvet.50880 99.91 True fake: scaffold gap size wrong estimation (local) 35710516 35711570 5704 6758 NC_000014.9 velvet.50880 95.92 True CONTIG velvet.50880 6846 misassembled CONTIG velvet.50912 335 unaligned CONTIG velvet.50935 877 unaligned 39896817 39897418 3557 4159 NC_000014.9 velvet.50954 99.5 True fake: scaffold gap size wrong estimation (local) 39899707 39900558 7083 7934 NC_000014.9 velvet.50954 100.0 True local misassembly 39900743 39901246 7935 8438 NC_000014.9 velvet.50954 98.02 True fake: scaffold gap size wrong estimation (local) 39902106 39908294 10111 16439 NC_000014.9 velvet.50954 99.94 True fake: scaffold gap size wrong estimation (local) 39908544 39918477 17374 27307 NC_000014.9 velvet.50954 100.0 True fake: scaffold gap size wrong estimation (local) 39918602 39920979 28272 30649 NC_000014.9 velvet.50954 99.96 True relocation, scaffold gap is present, inconsistency = 16731 39882221 39893052 50566 39468 NC_000014.9 velvet.50954 99.74 True fake: scaffold gap size wrong estimation (local) 39876799 39881932 56682 51549 NC_000014.9 velvet.50954 99.92 True fake: scaffold gap size wrong estimation (local) 39872769 39876505 61559 57823 NC_000014.9 velvet.50954 99.97 True fake: scaffold gap size wrong estimation (local) 39866306 39872485 68844 62663 NC_000014.9 velvet.50954 99.61 True fake: scaffold gap size wrong estimation (local) 39860452 39862147 71773 70078 NC_000014.9 velvet.50954 99.88 True local misassembly 39862407 39865157 74578 71784 NC_000014.9 velvet.50954 99.78 True fake: scaffold gap size wrong estimation (local) 39858463 39860420 78586 76629 NC_000014.9 velvet.50954 99.39 True local misassembly 39857222 39858453 84222 82991 NC_000014.9 velvet.50954 97.32 True fake: scaffold gap size wrong estimation (local) 39852029 39856820 90086 85295 NC_000014.9 velvet.50954 99.52 True fake: scaffold gap size wrong estimation (local) 39849726 39852028 92551 90249 NC_000014.9 velvet.50954 99.78 True indel: indel (<= 5bp) 39848769 39849723 93506 92552 NC_000014.9 velvet.50954 100.0 True fake: scaffold gap size wrong estimation (local) 39834506 39843730 102655 93517 NC_000014.9 velvet.50954 99.0 True fake: scaffold gap size wrong estimation (local) 39825228 39834234 112633 103696 NC_000014.9 velvet.50954 98.35 True fake: scaffold gap size wrong estimation (local) 39814950 39819525 119513 114640 NC_000014.9 velvet.50954 99.85 True fake: scaffold gap size wrong estimation (local) 39811738 39814800 123289 120227 NC_000014.9 velvet.50954 99.8 True fake: scaffold gap size wrong estimation (local) 39808158 39811505 127647 124300 NC_000014.9 velvet.50954 99.79 True fake: scaffold gap size wrong estimation (local) 39797736 39808036 138863 128563 NC_000014.9 velvet.50954 99.83 True fake: scaffold gap size wrong estimation (local) 39796386 39797597 140835 139624 NC_000014.9 velvet.50954 100.0 True fake: scaffold gap size wrong estimation (local) 39790220 39796153 147226 141289 NC_000014.9 velvet.50954 99.97 True fake: scaffold gap size wrong estimation (local) 39787656 39789867 150540 148361 NC_000014.9 velvet.50954 98.5 True fake: scaffold gap size wrong estimation (extensive) 39777710 39778422 151900 151209 NC_000014.9 velvet.50954 96.44 True relocation, scaffold gap is present, inconsistency = -10063 39785934 39787538 153739 152135 NC_000014.9 velvet.50954 99.81 True fake: scaffold gap size wrong estimation (local) 39780792 39785710 159632 154439 NC_000014.9 velvet.50954 95.35 True fake: scaffold gap size wrong estimation (local) 39775326 39776789 162010 160546 NC_000014.9 velvet.50954 99.93 True fake: scaffold gap size wrong estimation (local) 39765874 39775073 173038 163090 NC_000014.9 velvet.50954 99.56 True fake: scaffold gap size wrong estimation (local) 39761942 39765780 177290 173452 NC_000014.9 velvet.50954 99.97 True relocation, scaffold gap is present, inconsistency = -46831852 86586317 86590439 184767 180645 NC_000014.9 velvet.50954 99.93 True fake: scaffold gap size wrong estimation (local) 86583334 86586018 188589 185871 NC_000014.9 velvet.50954 98.38 True relocation, scaffold gap is present, inconsistency = 46821595 39757715 39761728 192728 188600 NC_000014.9 velvet.50954 99.8 True fake: scaffold gap size wrong estimation (local) 39751022 39752198 193915 192739 NC_000014.9 velvet.50954 99.83 True local misassembly 39752459 39757578 199813 193926 NC_000014.9 velvet.50954 99.84 True relocation, scaffold gap is present, inconsistency = 46795292 86552881 86555591 199824 202533 NC_000014.9 velvet.50954 99.56 True relocation, scaffold gap is present, inconsistency = -46816037 39739565 39741450 202544 204429 NC_000014.9 velvet.50954 99.84 True fake: scaffold gap size wrong estimation (local) 39741569 39749553 205358 214224 NC_000014.9 velvet.50954 98.71 True fake: scaffold gap size wrong estimation (local) 39749850 39751031 215229 216410 NC_000014.9 velvet.50954 100.0 True relocation, scaffold gap is present, inconsistency = 10413 39731178 39739249 224669 216598 NC_000014.9 velvet.50954 99.93 True fake: scaffold gap size wrong estimation (local) 39730259 39730988 226127 225398 NC_000014.9 velvet.50954 98.63 True relocation, scaffold gap is present, inconsistency = -17796277 57519993 57520654 232670 232009 NC_000014.9 velvet.50954 99.7 True relocation, scaffold gap is present, inconsistency = 17781554 39728145 39728713 242964 242396 NC_000014.9 velvet.50954 99.3 True fake: scaffold gap size wrong estimation (local) 39707473 39727360 264683 244616 NC_000014.9 velvet.50954 99.91 True fake: scaffold gap size wrong estimation (local) 39696708 39697512 278723 277919 NC_000014.9 velvet.50954 99.75 True relocation, scaffold gap is present, inconsistency = -10479 39704201 39707176 281709 278734 NC_000014.9 velvet.50954 99.9 True fake: scaffold gap size wrong estimation (extensive) 39694173 39696676 284207 281720 NC_000014.9 velvet.50954 99.28 True fake: scaffold gap size wrong estimation (local) 39667002 39674929 309262 299991 NC_000014.9 velvet.50954 99.94 True fake: scaffold gap size wrong estimation (local) 39662355 39666734 314410 310031 NC_000014.9 velvet.50954 100.0 True fake: not a misassembly (possible transposable element) 39642044 39644057 329951 331958 NC_000014.9 velvet.50954 99.65 True fake: not a misassembly (possible transposable element) 39640205 39641977 333741 331969 NC_000014.9 velvet.50954 100.0 True fake: not a misassembly (possible transposable element) 39644177 39645157 334028 335008 NC_000014.9 velvet.50954 99.8 True fake: not a misassembly (possible transposable element) 39630977 39631943 343604 342638 NC_000014.9 velvet.50954 100.0 True fake: scaffold gap size wrong estimation (local) 39625171 39629184 350260 346247 NC_000014.9 velvet.50954 99.83 True relocation, scaffold gap is present, inconsistency = -16798 39639635 39640185 352594 352044 NC_000014.9 velvet.50954 100.0 True relocation, scaffold gap is present, inconsistency = 14291 39674980 39688066 373098 386184 NC_000014.9 velvet.50954 99.95 True fake: scaffold gap size wrong estimation (local) 39688299 39691910 387222 390833 NC_000014.9 velvet.50954 99.89 True fake: scaffold gap size wrong estimation (local) 39691995 39693129 391452 392586 NC_000014.9 velvet.50954 99.74 True CONTIG velvet.50954 396077 misassembled CONTIG velvet.50987 206 unaligned CONTIG velvet.50997 279 unaligned CONTIG velvet.51062 201 unaligned CONTIG velvet.51068 341 unaligned CONTIG velvet.51084 295 unaligned 63340010 63340784 2389 3163 NC_000014.9 velvet.51095 100.0 True CONTIG velvet.51095 3697 correct CONTIG velvet.51096 212 unaligned CONTIG velvet.51117 483 unaligned CONTIG velvet.51155 318 unaligned CONTIG velvet.51169 374 unaligned CONTIG velvet.51197 429 unaligned CONTIG velvet.51216 807 unaligned CONTIG velvet.51244 305 unaligned CONTIG velvet.51261 313 unaligned CONTIG velvet.51275 228 unaligned 71400081 71402364 1 2275 NC_000014.9 velvet.51378 99.56 True fake: scaffold gap size wrong estimation (local) 71402641 71403345 3470 4174 NC_000014.9 velvet.51378 99.86 True fake: scaffold gap size wrong estimation (local) 71403632 71404362 4980 5710 NC_000014.9 velvet.51378 100.0 True fake: scaffold gap size wrong estimation (local) 71404492 71406593 6172 8273 NC_000014.9 velvet.51378 100.0 True fake: scaffold gap size wrong estimation (local) 71438170 71440116 36835 38782 NC_000014.9 velvet.51378 99.95 True fake: scaffold gap size wrong estimation (local) 71440319 71441929 39715 41265 NC_000014.9 velvet.51378 96.02 True local misassembly 71437604 71438168 41362 41926 NC_000014.9 velvet.51378 100.0 True fake: scaffold gap size wrong estimation (local) 71466611 71467869 66256 67514 NC_000014.9 velvet.51378 100.0 True fake: scaffold gap size wrong estimation (local) 71468030 71469147 67761 68878 NC_000014.9 velvet.51378 97.32 True local misassembly 71472376 71476672 68879 73175 NC_000014.9 velvet.51378 99.7 True fake: scaffold gap size wrong estimation (local) 71510483 71512396 106271 108214 NC_000014.9 velvet.51378 97.54 True CONTIG velvet.51378 108214 correct CONTIG velvet.51386 329 unaligned CONTIG velvet.51405 287 unaligned 92102263 92104175 1601 3550 NC_000014.9 velvet.51406 100.0 True fake: scaffold gap size wrong estimation (local) 92104945 92107091 5146 7292 NC_000014.9 velvet.51406 99.81 True fake: scaffold gap size wrong estimation (local) 92107977 92109189 9242 10454 NC_000014.9 velvet.51406 100.0 True fake: scaffold gap size wrong estimation (local) 92135985 92137442 35260 36716 NC_000014.9 velvet.51406 99.86 True fake: scaffold gap size wrong estimation (local) 92140919 92141493 39474 40048 NC_000014.9 velvet.51406 100.0 True fake: scaffold gap size wrong estimation (local) 92146537 92149510 40059 43367 NC_000014.9 velvet.51406 95.91 True fake: scaffold gap size wrong estimation (local) 92151467 92151976 46207 46716 NC_000014.9 velvet.51406 100.0 True CONTIG velvet.51406 47000 correct CONTIG velvet.51454 430 unaligned CONTIG velvet.51482 296 unaligned 99337092 99337932 841 1 NC_000014.9 velvet.51501 99.88 True CONTIG velvet.51501 991 correct CONTIG velvet.51510 454 unaligned CONTIG velvet.51566 207 unaligned 45966282 45976259 1 9971 NC_000014.9 velvet.51586 99.7 True relocation, scaffold gap is present, inconsistency = 19268972 65245368 65246690 11430 10108 NC_000014.9 velvet.51586 100.0 True inversion, scaffold gap is present 65247380 65248335 11626 12571 NC_000014.9 velvet.51586 98.85 True fake: scaffold gap size wrong estimation (local) 65249430 65250606 14461 15637 NC_000014.9 velvet.51586 100.0 True fake: scaffold gap size wrong estimation (local) 65251132 65251940 16375 17183 NC_000014.9 velvet.51586 100.0 True inversion, scaffold gap is present 65242031 65245110 20273 17194 NC_000014.9 velvet.51586 99.97 True fake: scaffold gap size wrong estimation (local) 65241071 65241743 21736 21064 NC_000014.9 velvet.51586 100.0 True fake: scaffold gap size wrong estimation (local) 65238892 65240466 24241 22667 NC_000014.9 velvet.51586 100.0 True local misassembly 65236788 65238868 26541 24370 NC_000014.9 velvet.51586 100.0 True relocation, scaffold gap is present, inconsistency = 19256820 45979139 45979957 26552 27370 NC_000014.9 velvet.51586 99.88 True fake: scaffold gap size wrong estimation (local) 45980554 45982727 28361 30469 NC_000014.9 velvet.51586 96.61 True relocation, scaffold gap is present, inconsistency = 19277014 65288546 65290557 59274 61285 NC_000014.9 velvet.51586 100.0 True fake: scaffold gap size wrong estimation (local) 65290888 65291498 62048 62658 NC_000014.9 velvet.51586 100.0 True fake: scaffold gap size wrong estimation (local) 65291653 65292328 63157 63832 NC_000014.9 velvet.51586 100.0 True fake: scaffold gap size wrong estimation (local) 65294825 65295677 67038 67890 NC_000014.9 velvet.51586 98.83 True CONTIG velvet.51586 95335 misassembled 49198251 49201983 1 3733 NC_000014.9 velvet.51593 99.92 True CONTIG velvet.51593 3733 correct CONTIG velvet.51596 612 unaligned CONTIG velvet.51645 3566 unaligned CONTIG velvet.51655 316 unaligned 86717392 86721868 3904 9552 NC_000014.9 velvet.51669 99.84 True fake: scaffold gap size wrong estimation (local) 86722129 86729390 10271 17533 NC_000014.9 velvet.51669 99.86 True fake: scaffold gap size wrong estimation (local) 86729660 86731614 18682 20636 NC_000014.9 velvet.51669 99.9 True fake: scaffold gap size wrong estimation (local) 86732266 86732974 22371 23079 NC_000014.9 velvet.51669 99.44 True fake: scaffold gap size wrong estimation (local) 86751310 86751933 37730 38353 NC_000014.9 velvet.51669 98.08 True fake: scaffold gap size wrong estimation (local) 86752822 86753883 39206 40267 NC_000014.9 velvet.51669 99.44 True fake: scaffold gap size wrong estimation (local) 86754025 86756519 41376 43916 NC_000014.9 velvet.51669 97.78 True fake: scaffold gap size wrong estimation (local) 86756677 86761394 44863 49577 NC_000014.9 velvet.51669 99.87 True fake: scaffold gap size wrong estimation (local) 86761856 86763162 50764 52070 NC_000014.9 velvet.51669 99.85 True fake: scaffold gap size wrong estimation (local) 86763443 86765712 52809 55080 NC_000014.9 velvet.51669 97.71 True fake: scaffold gap size wrong estimation (local) 86765997 86767532 56123 57657 NC_000014.9 velvet.51669 99.8 True fake: scaffold gap size wrong estimation (local) 86770186 86772686 57668 60121 NC_000014.9 velvet.51669 98.11 True fake: scaffold gap size wrong estimation (local) 86773748 86774323 60804 61379 NC_000014.9 velvet.51669 100.0 True local misassembly 86767760 86769551 61390 63181 NC_000014.9 velvet.51669 99.89 True fake: not a misassembly (possible transposable element) 101942364 101943080 68180 68947 NC_000014.9 velvet.51669 99.58 True fake: not a misassembly (possible transposable element) 86776494 86791135 68977 83746 NC_000014.9 velvet.51669 99.84 True relocation, scaffold gap is present, inconsistency = -28240322 58551795 58555102 84728 88127 NC_000014.9 velvet.51669 99.97 True fake: scaffold gap size wrong estimation (local) 58555405 58556763 89317 90675 NC_000014.9 velvet.51669 99.85 True local misassembly 58557035 58557924 90676 91565 NC_000014.9 velvet.51669 98.88 True CONTIG velvet.51669 91565 misassembled CONTIG velvet.51676 221 unaligned 86675078 86679222 709 4951 NC_000014.9 velvet.51691 99.88 True fake: scaffold gap size wrong estimation (local) 86679591 86681201 5166 6777 NC_000014.9 velvet.51691 99.81 True fake: scaffold gap size wrong estimation (local) 86681356 86682903 7634 9181 NC_000014.9 velvet.51691 99.94 True fake: scaffold gap size wrong estimation (local) 86683262 86684937 10213 11888 NC_000014.9 velvet.51691 96.24 True indel: indel (> 5bp) 86684942 86688216 11976 15250 NC_000014.9 velvet.51691 99.94 True fake: scaffold gap size wrong estimation (local) 86688728 86692367 15955 19594 NC_000014.9 velvet.51691 99.59 True local misassembly 86692376 86694545 20830 22999 NC_000014.9 velvet.51691 99.31 True relocation, scaffold gap is present, inconsistency = 19349516 106044452 106044981 23390 23919 NC_000014.9 velvet.51691 99.81 True fake: scaffold gap size wrong estimation (local) 106046958 106049390 26599 29029 NC_000014.9 velvet.51691 99.79 True relocation, scaffold gap is present, inconsistency = -40078772 65997368 66001761 55779 60174 NC_000014.9 velvet.51691 99.89 True relocation, scaffold gap is present, inconsistency = -20379 65992331 65997061 71123 75851 NC_000014.9 velvet.51691 99.89 True fake: not a misassembly (possible transposable element) 86711666 86717116 75862 81570 NC_000014.9 velvet.51691 99.72 True fake: not a misassembly (possible transposable element) 66001780 66009667 81581 89627 NC_000014.9 velvet.51691 99.65 True relocation, scaffold gap is present, inconsistency = -12383941 53627092 53633229 90993 97129 NC_000014.9 velvet.51691 99.85 True relocation, scaffold gap is present, inconsistency = -15957 53617742 53626950 97599 106920 NC_000014.9 velvet.51691 99.97 True relocation, scaffold gap is present, inconsistency = 12415158 66042119 66042655 106931 107467 NC_000014.9 velvet.51691 100.0 True relocation, scaffold gap is present, inconsistency = 63943 66106609 66119474 121127 107478 NC_000014.9 velvet.51691 99.91 True fake: scaffold gap size wrong estimation (local) 66101254 66106358 127399 122121 NC_000014.9 velvet.51691 99.96 True fake: scaffold gap size wrong estimation (local) 66095000 66100906 134449 128543 NC_000014.9 velvet.51691 100.0 True relocation, scaffold gap is present, inconsistency = 49825 66042668 66043444 136180 136956 NC_000014.9 velvet.51691 100.0 True relocation, scaffold gap is present, inconsistency = -40082 66010805 66017158 144399 150752 NC_000014.9 velvet.51691 99.81 True fake: scaffold gap size wrong estimation (local) 66034934 66041874 167365 174305 NC_000014.9 velvet.51691 99.9 True CONTIG velvet.51691 174305 misassembled 55461865 55462783 1 919 NC_000014.9 velvet.51702 100.0 True fake: scaffold gap size wrong estimation (local) 55463011 55463803 1128 1920 NC_000014.9 velvet.51702 99.87 True CONTIG velvet.51702 3790 correct CONTIG velvet.51703 292 unaligned CONTIG velvet.51746 591 unaligned CONTIG velvet.51794 200 unaligned CONTIG velvet.51809 411 unaligned 34146109 34150156 3082 7129 NC_000014.9 velvet.51834 99.98 True CONTIG velvet.51834 7320 correct CONTIG velvet.51846 475 unaligned CONTIG velvet.51854 226 unaligned 52714920 52715626 2740 3492 NC_000014.9 velvet.51894 100.0 True fake: scaffold gap size wrong estimation (local) 52715910 52716467 6673 7230 NC_000014.9 velvet.51894 100.0 True local misassembly 52716764 52717352 7231 7819 NC_000014.9 velvet.51894 98.3 True fake: scaffold gap size wrong estimation (local) 52718791 52720089 10130 11428 NC_000014.9 velvet.51894 100.0 True CONTIG velvet.51894 11428 correct CONTIG velvet.51937 274 unaligned CONTIG velvet.52003 311 unaligned CONTIG velvet.52018 220 unaligned CONTIG velvet.52052 275 unaligned 55529197 55531295 4016 1918 NC_000014.9 velvet.52081 100.0 True CONTIG velvet.52081 6087 correct CONTIG velvet.52130 211 unaligned CONTIG velvet.52135 317 unaligned CONTIG velvet.52145 277 unaligned CONTIG velvet.52157 394 unaligned CONTIG velvet.52344 3781 unaligned 95782294 95783850 1 1557 NC_000014.9 velvet.52350 99.94 True CONTIG velvet.52350 1557 correct 47424446 47428820 719 6199 NC_000014.9 velvet.52378 99.72 True CONTIG velvet.52378 6199 correct CONTIG velvet.52468 220 unaligned CONTIG velvet.52476 1014 unaligned CONTIG velvet.52483 246 unaligned CONTIG velvet.52663 234 unaligned 77364644 77366992 22928 20580 NC_000014.9 velvet.52675 100.0 True fake: scaffold gap size wrong estimation (local) 77363743 77364546 23967 23165 NC_000014.9 velvet.52675 99.75 True fake: scaffold gap size wrong estimation (local) 77361292 77363600 27137 24879 NC_000014.9 velvet.52675 97.74 True fake: scaffold gap size wrong estimation (local) 77359181 77360983 30219 28415 NC_000014.9 velvet.52675 99.83 True fake: scaffold gap size wrong estimation (local) 77352711 77353420 39218 38509 NC_000014.9 velvet.52675 99.86 True fake: scaffold gap size wrong estimation (local) 77349379 77350776 43233 41836 NC_000014.9 velvet.52675 99.28 True local misassembly 77348494 77349098 43838 43234 NC_000014.9 velvet.52675 100.0 True CONTIG velvet.52675 43838 correct CONTIG velvet.52680 226 unaligned 48798812 48804953 7735 1 NC_000014.9 velvet.52687 99.84 True CONTIG velvet.52687 15106 correct 20799147 20800520 1325 1 NC_000014.9 velvet.52720 96.33 True relocation, scaffold gap is present, inconsistency = 20753868 41557670 41564458 4607 11395 NC_000014.9 velvet.52720 99.96 True fake: scaffold gap size wrong estimation (local) 41564744 41566460 12508 14224 NC_000014.9 velvet.52720 100.0 True fake: scaffold gap size wrong estimation (local) 41569744 41571380 14235 15837 NC_000014.9 velvet.52720 97.88 True CONTIG velvet.52720 15837 misassembled 81712914 81719729 7098 2 NC_000014.9 velvet.52740 99.85 True fake: scaffold gap size wrong estimation (local) 81675680 81678388 39317 36609 NC_000014.9 velvet.52740 100.0 True fake: scaffold gap size wrong estimation (local) 81672565 81675397 43199 40367 NC_000014.9 velvet.52740 99.93 True fake: scaffold gap size wrong estimation (local) 81670228 81672164 46304 44368 NC_000014.9 velvet.52740 99.95 True indel: indel (> 5bp) 81669411 81670221 47149 46339 NC_000014.9 velvet.52740 98.77 True relocation, scaffold gap is present, inconsistency = -41746 81698495 81706364 59807 51942 NC_000014.9 velvet.52740 99.75 True fake: scaffold gap size wrong estimation (local) 81697294 81698203 61715 60806 NC_000014.9 velvet.52740 100.0 True fake: scaffold gap size wrong estimation (local) 81695812 81697007 63258 62063 NC_000014.9 velvet.52740 99.92 True relocation, scaffold gap is present, inconsistency = 90488 81597262 81599547 69035 71366 NC_000014.9 velvet.52740 99.91 True fake: scaffold gap size wrong estimation (local) 81599838 81602452 72431 75040 NC_000014.9 velvet.52740 99.62 True fake: scaffold gap size wrong estimation (local) 81603321 81604549 76782 78010 NC_000014.9 velvet.52740 100.0 True fake: scaffold gap size wrong estimation (local) 81610229 81611564 78021 79356 NC_000014.9 velvet.52740 100.0 True relocation, scaffold gap is present, inconsistency = 56911404 24698043 24698814 80138 79367 NC_000014.9 velvet.52740 99.87 True fake: scaffold gap size wrong estimation (local) 24676574 24678437 98754 96891 NC_000014.9 velvet.52740 99.95 True fake: scaffold gap size wrong estimation (local) 24666812 24675942 109249 100119 NC_000014.9 velvet.52740 99.97 True fake: scaffold gap size wrong estimation (local) 24659941 24666345 116947 110543 NC_000014.9 velvet.52740 99.95 True fake: not a misassembly (possible transposable element) 41793276 41795161 116958 118843 NC_000014.9 velvet.52740 100.0 True fake: not a misassembly (possible transposable element) 24658739 24659673 119788 118854 NC_000014.9 velvet.52740 100.0 True fake: not a misassembly (possible transposable element) 81642118 81643026 128287 127379 NC_000014.9 velvet.52740 100.0 True fake: not a misassembly (possible transposable element) 24628920 24632100 146407 143227 NC_000014.9 velvet.52740 99.81 True fake: scaffold gap size wrong estimation (local) 24627426 24628638 148474 147262 NC_000014.9 velvet.52740 100.0 True fake: scaffold gap size wrong estimation (local) 24624198 24627165 152232 149264 NC_000014.9 velvet.52740 99.97 True CONTIG velvet.52740 183548 misassembled CONTIG velvet.52749 365 unaligned 56383397 56384927 1 1531 NC_000014.9 velvet.52787 100.0 True fake: scaffold gap size wrong estimation (local) 56385236 56387326 2430 4519 NC_000014.9 velvet.52787 99.81 True CONTIG velvet.52787 4519 correct CONTIG velvet.52811 310 unaligned CONTIG velvet.52823 267 unaligned 18584194 18585036 4766 3924 NC_000014.9 velvet.52831 100.0 True fake: scaffold gap size wrong estimation (local) 18581934 18583511 7866 6283 NC_000014.9 velvet.52831 99.87 True fake: scaffold gap size wrong estimation (local) 18577585 18581836 12910 8006 NC_000014.9 velvet.52831 99.95 True fake: scaffold gap size wrong estimation (local) 18544037 18544832 43002 42207 NC_000014.9 velvet.52831 99.87 True relocation, scaffold gap is present, inconsistency = -13712 18551347 18554602 49488 46149 NC_000014.9 velvet.52831 99.94 True fake: scaffold gap size wrong estimation (local) 18550167 18550957 51381 50591 NC_000014.9 velvet.52831 100.0 True fake: scaffold gap size wrong estimation (local) 18518564 18519155 81738 81160 NC_000014.9 velvet.52831 97.77 True CONTIG velvet.52831 120119 misassembled 43217348 43218052 22604 23308 NC_000014.9 velvet.52836 100.0 True fake: scaffold gap size wrong estimation (local) 43218602 43229760 24751 35872 NC_000014.9 velvet.52836 99.65 True CONTIG velvet.52836 38493 correct 39272740 39273255 139 654 NC_000014.9 velvet.52862 97.67 True fake: scaffold gap size wrong estimation (local) 39273495 39274441 936 1882 NC_000014.9 velvet.52862 98.84 True fake: scaffold gap size wrong estimation (local) 39275384 39277511 3633 5760 NC_000014.9 velvet.52862 99.91 True fake: scaffold gap size wrong estimation (local) 39278239 39278908 7291 7960 NC_000014.9 velvet.52862 100.0 True CONTIG velvet.52862 11410 correct CONTIG velvet.52871 221 unaligned CONTIG velvet.52874 275 unaligned CONTIG velvet.52894 247 unaligned 21005010 21006111 12 1113 NC_000014.9 velvet.52898 99.91 True CONTIG velvet.52898 6433 correct CONTIG velvet.52910 225 unaligned CONTIG velvet.52943 416 unaligned 64691252 64691868 4617 5233 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 64692151 64696986 6093 10928 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 64697253 64699644 12014 14405 NC_000014.9 velvet.52988 100.0 True relocation, scaffold gap is present, inconsistency = 8983 64710630 64711400 17167 16408 NC_000014.9 velvet.52988 98.55 True fake: scaffold gap size wrong estimation (local) 64700806 64709724 27783 18897 NC_000014.9 velvet.52988 99.64 True relocation, scaffold gap is present, inconsistency = 24588 64675295 64675942 28059 28706 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 64677105 64678182 30207 31282 NC_000014.9 velvet.52988 99.63 True fake: scaffold gap size wrong estimation (local) 64682131 64683812 31413 33094 NC_000014.9 velvet.52988 99.82 True fake: scaffold gap size wrong estimation (local) 64687788 64690006 33105 35323 NC_000014.9 velvet.52988 99.95 True local misassembly 64684044 64685089 35334 36379 NC_000014.9 velvet.52988 100.0 True relocation, scaffold gap is present, inconsistency = 59939 64745039 64750505 41946 36390 NC_000014.9 velvet.52988 99.28 True fake: scaffold gap size wrong estimation (local) 64734986 64744759 52864 43046 NC_000014.9 velvet.52988 99.96 True fake: scaffold gap size wrong estimation (local) 64733335 64734692 55073 53716 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 64722494 64723310 67775 66959 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 64711671 64722213 79468 68914 NC_000014.9 velvet.52988 99.15 True inversion, scaffold gap is present 64723801 64733165 79479 88843 NC_000014.9 velvet.52988 100.0 True relocation, scaffold gap is present, inconsistency = -68362 64667506 64668493 91546 92533 NC_000014.9 velvet.52988 99.7 True inversion, scaffold gap is present 64671504 64674608 96365 92638 NC_000014.9 velvet.52988 99.93 True fake: scaffold gap size wrong estimation (local) 64669930 64671134 98162 96958 NC_000014.9 velvet.52988 99.92 True fake: scaffold gap size wrong estimation (local) 64668582 64669645 99930 98867 NC_000014.9 velvet.52988 99.81 True relocation, scaffold gap is present, inconsistency = -24631391 89295775 89296710 104128 103193 NC_000014.9 velvet.52988 100.0 True relocation, scaffold gap is present, inconsistency = 30140080 59152977 59155179 104644 106846 NC_000014.9 velvet.52988 99.95 True relocation, scaffold gap is present, inconsistency = 5594112 64752050 64756316 109605 113871 NC_000014.9 velvet.52988 100.0 True relocation, scaffold gap is present, inconsistency = 24532297 89289215 89294479 119737 114473 NC_000014.9 velvet.52988 99.81 True relocation, scaffold gap is present, inconsistency = 24607726 64679507 64680964 121719 120262 NC_000014.9 velvet.52988 100.0 True relocation, scaffold gap is present, inconsistency = 74289 64756587 64768100 123053 134836 NC_000014.9 velvet.52988 99.97 True fake: scaffold gap size wrong estimation (local) 64768322 64776508 135844 144029 NC_000014.9 velvet.52988 99.96 True fake: scaffold gap size wrong estimation (local) 64789343 64791319 153939 155915 NC_000014.9 velvet.52988 99.95 True fake: scaffold gap size wrong estimation (local) 64791597 64797243 157054 162700 NC_000014.9 velvet.52988 99.84 True relocation, scaffold gap is present, inconsistency = -20892 64776731 64780439 163080 166788 NC_000014.9 velvet.52988 99.78 True fake: scaffold gap size wrong estimation (local) 64782112 64783221 169148 170256 NC_000014.9 velvet.52988 99.91 True fake: scaffold gap size wrong estimation (local) 64783497 64785363 171404 173270 NC_000014.9 velvet.52988 99.95 True relocation, scaffold gap is present, inconsistency = 22932 64808306 64809005 173281 173980 NC_000014.9 velvet.52988 99.86 True fake: scaffold gap size wrong estimation (local) 64809626 64810421 176047 176842 NC_000014.9 velvet.52988 99.87 True relocation, scaffold gap is present, inconsistency = -6556099 58254591 58255513 177111 178021 NC_000014.9 velvet.52988 98.69 True fake: scaffold gap size wrong estimation (local) 58257515 58258099 180718 181302 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 58259610 58261153 183630 185173 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 58263115 58265150 187739 189774 NC_000014.9 velvet.52988 96.56 True fake: scaffold gap size wrong estimation (local) 58265252 58267056 190568 192372 NC_000014.9 velvet.52988 99.94 True fake: scaffold gap size wrong estimation (local) 58267315 58268969 193269 194923 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 58270149 58271080 196662 197593 NC_000014.9 velvet.52988 99.68 True fake: scaffold gap size wrong estimation (local) 58271486 58273552 198645 200695 NC_000014.9 velvet.52988 99.12 True fake: scaffold gap size wrong estimation (local) 58273820 58274681 201574 202425 NC_000014.9 velvet.52988 98.71 True fake: scaffold gap size wrong estimation (local) 58275040 58276948 203159 205069 NC_000014.9 velvet.52988 99.9 True fake: scaffold gap size wrong estimation (local) 58277473 58278011 206267 206805 NC_000014.9 velvet.52988 99.81 True relocation, scaffold gap is present, inconsistency = 6519353 64797511 64802439 206952 211876 NC_000014.9 velvet.52988 99.84 True relocation, scaffold gap is present, inconsistency = -6580599 58227378 58227982 217414 218018 NC_000014.9 velvet.52988 99.83 True fake: scaffold gap size wrong estimation (local) 58228762 58229423 218777 219438 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 58229709 58230777 220490 221558 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 58231299 58232426 222120 223247 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 58233112 58234836 224629 226353 NC_000014.9 velvet.52988 96.7 True fake: scaffold gap size wrong estimation (local) 58235107 58236305 227338 228535 NC_000014.9 velvet.52988 99.92 True fake: scaffold gap size wrong estimation (local) 58236564 58237682 228819 229937 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 58237977 58240752 231116 233891 NC_000014.9 velvet.52988 99.89 True fake: scaffold gap size wrong estimation (local) 58242248 58246440 235837 240562 NC_000014.9 velvet.52988 99.93 True fake: scaffold gap size wrong estimation (local) 58246692 58247988 241650 242946 NC_000014.9 velvet.52988 99.85 True fake: scaffold gap size wrong estimation (local) 58250286 58251365 246225 247304 NC_000014.9 velvet.52988 99.07 True fake: scaffold gap size wrong estimation (local) 58251559 58252835 247494 248770 NC_000014.9 velvet.52988 100.0 True relocation, scaffold gap is present, inconsistency = 11893 58280372 58282344 264414 266422 NC_000014.9 velvet.52988 99.59 True fake: scaffold gap size wrong estimation (local) 58282629 58286288 267449 271534 NC_000014.9 velvet.52988 99.86 True fake: scaffold gap size wrong estimation (local) 58286797 58289794 272438 275437 NC_000014.9 velvet.52988 99.83 True fake: scaffold gap size wrong estimation (local) 58290039 58290776 276410 277147 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 58291874 58292593 278850 279569 NC_000014.9 velvet.52988 99.86 True fake: scaffold gap size wrong estimation (local) 58294022 58295126 280755 281859 NC_000014.9 velvet.52988 99.55 True fake: scaffold gap size wrong estimation (local) 58295776 58296529 282214 282967 NC_000014.9 velvet.52988 98.41 True fake: scaffold gap size wrong estimation (local) 58296530 58298891 283983 286344 NC_000014.9 velvet.52988 98.86 True fake: scaffold gap size wrong estimation (local) 58298892 58300367 286417 287892 NC_000014.9 velvet.52988 99.32 True indel: indel (> 5bp) 58300368 58301300 287899 288831 NC_000014.9 velvet.52988 100.0 True indel: indel (<= 5bp) 58301304 58302106 288832 289634 NC_000014.9 velvet.52988 99.88 True fake: scaffold gap size wrong estimation (local) 58318002 58319062 299559 300619 NC_000014.9 velvet.52988 99.91 True fake: scaffold gap size wrong estimation (local) 58320910 58321963 303486 304539 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 58323193 58323921 306219 306947 NC_000014.9 velvet.52988 100.0 True relocation, scaffold gap is present, inconsistency = -45386 58278546 58279322 306958 307734 NC_000014.9 velvet.52988 100.0 True local misassembly 58279536 58280129 307735 308328 NC_000014.9 velvet.52988 98.32 True relocation, scaffold gap is present, inconsistency = 6529102 64810928 64812100 310025 311195 NC_000014.9 velvet.52988 99.74 True fake: scaffold gap size wrong estimation (local) 64812249 64813597 312363 313711 NC_000014.9 velvet.52988 99.93 True fake: scaffold gap size wrong estimation (local) 64839115 64842878 338291 342052 NC_000014.9 velvet.52988 99.79 True fake: scaffold gap size wrong estimation (local) 64843075 64853939 343029 354053 NC_000014.9 velvet.52988 99.94 True fake: scaffold gap size wrong estimation (local) 64854581 64857389 355472 358299 NC_000014.9 velvet.52988 99.05 True relocation, scaffold gap is present, inconsistency = -19472 64837928 64838979 358310 359359 NC_000014.9 velvet.52988 99.71 True local misassembly 64835529 64837642 359370 361483 NC_000014.9 velvet.52988 99.95 True relocation, scaffold gap is present, inconsistency = -16683 64820970 64822350 361494 362874 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 64822434 64833373 363820 374658 NC_000014.9 velvet.52988 98.97 True fake: scaffold gap size wrong estimation (local) 64834727 64835380 376657 377310 NC_000014.9 velvet.52988 100.0 True relocation, scaffold gap is present, inconsistency = 46565 64885736 64888022 381101 383387 NC_000014.9 velvet.52988 99.61 True fake: not a misassembly (possible transposable element) 82878488 82879969 384879 383398 NC_000014.9 velvet.52988 100.0 True fake: not a misassembly (possible transposable element) 64888325 64889206 384894 385775 NC_000014.9 velvet.52988 99.77 True relocation, scaffold gap is present, inconsistency = -7790 64882500 64884266 386859 388626 NC_000014.9 velvet.52988 99.6 True relocation, scaffold gap is present, inconsistency = -11293 64872984 64876275 388637 391928 NC_000014.9 velvet.52988 99.97 True fake: scaffold gap size wrong estimation (local) 64876400 64880033 392813 396446 NC_000014.9 velvet.52988 99.64 True local misassembly 64880034 64880899 399234 400099 NC_000014.9 velvet.52988 97.81 True indel: indel (<= 5bp) 64880900 64881527 400101 400728 NC_000014.9 velvet.52988 99.2 True fake: scaffold gap size wrong estimation (local) 64884390 64885059 404328 404994 NC_000014.9 velvet.52988 98.81 True relocation, scaffold gap is present, inconsistency = 17994914 82879984 82885681 410717 405005 NC_000014.9 velvet.52988 99.18 True relocation, scaffold gap is present, inconsistency = -15598 82894318 82895571 412036 410728 NC_000014.9 velvet.52988 95.65 True fake: scaffold gap size wrong estimation (local) 82891250 82893311 415881 413816 NC_000014.9 velvet.52988 98.94 True fake: scaffold gap size wrong estimation (local) 82889765 82890293 417960 417432 NC_000014.9 velvet.52988 98.11 True fake: scaffold gap size wrong estimation (local) 82887945 82888853 420468 419560 NC_000014.9 velvet.52988 100.0 True local misassembly 82893782 82894298 420995 420479 NC_000014.9 velvet.52988 100.0 True fake: not a misassembly (possible transposable element) 64889307 64889835 430823 431351 NC_000014.9 velvet.52988 100.0 True fake: not a misassembly (possible transposable element) 82874057 82878466 435771 431362 NC_000014.9 velvet.52988 99.95 True relocation, scaffold gap is present, inconsistency = 24570087 58303034 58303959 435782 436707 NC_000014.9 velvet.52988 99.57 True fake: scaffold gap size wrong estimation (local) 58304092 58306629 437444 439981 NC_000014.9 velvet.52988 99.96 True fake: scaffold gap size wrong estimation (local) 58306872 58307615 441142 441885 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 58308004 58309263 442091 443350 NC_000014.9 velvet.52988 99.44 True fake: scaffold gap size wrong estimation (local) 58309264 58310245 446118 447099 NC_000014.9 velvet.52988 98.98 True fake: scaffold gap size wrong estimation (local) 58312507 58314873 449130 451496 NC_000014.9 velvet.52988 99.92 True fake: scaffold gap size wrong estimation (local) 58315136 58316632 452607 454103 NC_000014.9 velvet.52988 99.93 True fake: scaffold gap size wrong estimation (extensive) 58324204 58326188 454114 456098 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 58326438 58327719 457394 458675 NC_000014.9 velvet.52988 99.92 True local misassembly 58327932 58328755 458676 459499 NC_000014.9 velvet.52988 96.84 True fake: scaffold gap size wrong estimation (local) 58329007 58335328 460624 467112 NC_000014.9 velvet.52988 99.83 True fake: scaffold gap size wrong estimation (local) 58335616 58336991 467941 469308 NC_000014.9 velvet.52988 98.98 True fake: scaffold gap size wrong estimation (local) 58337301 58340292 470241 473381 NC_000014.9 velvet.52988 98.3 True fake: scaffold gap size wrong estimation (local) 58340788 58342668 474278 476158 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 58342892 58343584 476845 477537 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 58343862 58344967 478234 479339 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 58345034 58346672 479451 481316 NC_000014.9 velvet.52988 97.48 True fake: scaffold gap size wrong estimation (local) 58346983 58349393 482149 484559 NC_000014.9 velvet.52988 99.88 True fake: scaffold gap size wrong estimation (local) 58350132 58354453 486114 490342 NC_000014.9 velvet.52988 97.8 True fake: scaffold gap size wrong estimation (local) 58354720 58356660 491118 493058 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 58357001 58357578 493862 494439 NC_000014.9 velvet.52988 100.0 True relocation, scaffold gap is present, inconsistency = 11467 58375479 58376360 500873 501754 NC_000014.9 velvet.52988 100.0 True local misassembly 58376790 58377596 501755 502561 NC_000014.9 velvet.52988 98.76 True relocation, scaffold gap is present, inconsistency = -23047 58358409 58359810 506421 507868 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 58360097 58363448 508934 512286 NC_000014.9 velvet.52988 99.79 True fake: scaffold gap size wrong estimation (local) 58363721 58369378 513236 518960 NC_000014.9 velvet.52988 99.93 True fake: scaffold gap size wrong estimation (local) 58380473 58381319 523623 524469 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 58381580 58382618 524656 525694 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 58383178 58385950 527100 529871 NC_000014.9 velvet.52988 99.93 True fake: scaffold gap size wrong estimation (local) 58386209 58386911 530870 531563 NC_000014.9 velvet.52988 98.56 True fake: scaffold gap size wrong estimation (local) 58399128 58400161 550187 551322 NC_000014.9 velvet.52988 99.8 True fake: scaffold gap size wrong estimation (extensive) 58414783 58416045 556037 557299 NC_000014.9 velvet.52988 99.76 True fake: scaffold gap size wrong estimation (local) 58416225 58416871 557495 558141 NC_000014.9 velvet.52988 100.0 True local misassembly 58412910 58413751 560054 560895 NC_000014.9 velvet.52988 98.69 True fake: scaffold gap size wrong estimation (local) 58419256 58419796 561440 562025 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 58446563 58447470 589339 590246 NC_000014.9 velvet.52988 99.78 True fake: scaffold gap size wrong estimation (local) 58447776 58451003 590867 594759 NC_000014.9 velvet.52988 99.81 True relocation, scaffold gap is present, inconsistency = -66690 58389244 58390213 599690 600659 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 58391268 58391913 601656 602301 NC_000014.9 velvet.52988 97.52 True fake: scaffold gap size wrong estimation (local) 58395070 58396842 602560 604332 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 58397015 58398903 605246 607133 NC_000014.9 velvet.52988 99.95 True relocation, scaffold gap is present, inconsistency = 17594 58431929 58432747 622565 623383 NC_000014.9 velvet.52988 99.51 True fake: scaffold gap size wrong estimation (local) 58433994 58435755 625589 627408 NC_000014.9 velvet.52988 96.65 True relocation, scaffold gap is present, inconsistency = -12354 58426501 58428693 630508 632700 NC_000014.9 velvet.52988 99.32 True local misassembly 58428694 58431300 634182 636788 NC_000014.9 velvet.52988 99.81 True fake: scaffold gap size wrong estimation (local) 58437737 58439216 636799 638278 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 58463044 58463586 662439 662979 NC_000014.9 velvet.52988 99.45 True fake: scaffold gap size wrong estimation (local) 58463857 58468087 663850 668268 NC_000014.9 velvet.52988 99.83 True fake: scaffold gap size wrong estimation (local) 58468350 58470868 669344 671860 NC_000014.9 velvet.52988 99.84 True fake: scaffold gap size wrong estimation (local) 58499862 58500455 697888 698481 NC_000014.9 velvet.52988 99.83 True fake: scaffold gap size wrong estimation (local) 58500715 58502142 698988 700419 NC_000014.9 velvet.52988 99.72 True fake: scaffold gap size wrong estimation (local) 58502432 58506426 701425 705516 NC_000014.9 velvet.52988 99.9 True fake: scaffold gap size wrong estimation (local) 58507344 58507876 707360 707888 NC_000014.9 velvet.52988 98.87 True fake: scaffold gap size wrong estimation (local) 58532176 58536350 732368 736540 NC_000014.9 velvet.52988 99.93 True relocation, scaffold gap is present, inconsistency = -27165 58509227 58510072 736582 737427 NC_000014.9 velvet.52988 99.88 True fake: scaffold gap size wrong estimation (local) 58510340 58518921 738008 746996 NC_000014.9 velvet.52988 99.96 True relocation, scaffold gap is present, inconsistency = 37294942 21214596 21215192 747798 747202 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 21185509 21186976 775329 773862 NC_000014.9 velvet.52988 99.93 True fake: scaffold gap size wrong estimation (local) 21184165 21185337 777256 776084 NC_000014.9 velvet.52988 99.91 True fake: scaffold gap size wrong estimation (local) 21182187 21183092 780133 779229 NC_000014.9 velvet.52988 99.78 True relocation, scaffold gap is present, inconsistency = -24336300 45516277 45517367 782343 781253 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 45514601 45515330 784508 783736 NC_000014.9 velvet.52988 99.29 True relocation, scaffold gap is present, inconsistency = 13023682 58539023 58542224 784519 787726 NC_000014.9 velvet.52988 99.97 True fake: scaffold gap size wrong estimation (local) 58543158 58543974 789258 790074 NC_000014.9 velvet.52988 99.88 True fake: scaffold gap size wrong estimation (local) 58544625 58545950 791362 792715 NC_000014.9 velvet.52988 97.86 True fake: scaffold gap size wrong estimation (local) 58546044 58549980 792854 797635 NC_000014.9 velvet.52988 99.97 True fake: scaffold gap size wrong estimation (local) 58558193 58559898 801390 803095 NC_000014.9 velvet.52988 99.94 True fake: scaffold gap size wrong estimation (local) 58563873 58566802 803106 806035 NC_000014.9 velvet.52988 99.97 True fake: scaffold gap size wrong estimation (local) 58567059 58567591 806897 807429 NC_000014.9 velvet.52988 100.0 True relocation, scaffold gap is present, inconsistency = 9284654 67852820 67854385 808004 809569 NC_000014.9 velvet.52988 100.0 True inversion, scaffold gap is present 67849559 67852767 812691 809580 NC_000014.9 velvet.52988 96.91 True relocation, scaffold gap is present, inconsistency = 9284999 58560173 58563840 813411 817078 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 58568727 58570072 817151 818496 NC_000014.9 velvet.52988 100.0 True local misassembly 58567852 58568707 818507 819339 NC_000014.9 velvet.52988 97.04 True fake: scaffold gap size wrong estimation (local) 58570337 58571171 821929 822763 NC_000014.9 velvet.52988 99.88 True relocation, scaffold gap is present, inconsistency = -37360430 21219165 21220253 831187 832275 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 21221055 21221793 836032 836770 NC_000014.9 velvet.52988 98.92 True local misassembly 21222063 21222650 836771 837358 NC_000014.9 velvet.52988 98.3 True relocation, scaffold gap is present, inconsistency = 62998 21154468 21157976 841955 838447 NC_000014.9 velvet.52988 99.77 True fake: scaffold gap size wrong estimation (local) 21147147 21153732 850408 843333 NC_000014.9 velvet.52988 99.97 True fake: scaffold gap size wrong estimation (local) 21144743 21145669 853252 852326 NC_000014.9 velvet.52988 100.0 True fake: scaffold gap size wrong estimation (local) 21138043 21138881 857018 856193 NC_000014.9 velvet.52988 97.97 True fake: scaffold gap size wrong estimation (local) 21136817 21137329 859336 858824 NC_000014.9 velvet.52988 98.05 True local misassembly 21135320 21136593 860610 859337 NC_000014.9 velvet.52988 99.92 True fake: scaffold gap size wrong estimation (local) 21117553 21118287 872208 871474 NC_000014.9 velvet.52988 99.73 True CONTIG velvet.52988 872208 misassembled 26619626 26624233 1 4608 NC_000014.9 velvet.53072 99.91 True fake: scaffold gap size wrong estimation (local) 26624485 26628786 5586 9874 NC_000014.9 velvet.53072 99.25 True fake: scaffold gap size wrong estimation (local) 26651124 26664807 26988 41623 NC_000014.9 velvet.53072 99.85 True fake: scaffold gap size wrong estimation (local) 26679376 26681496 54689 56814 NC_000014.9 velvet.53072 99.72 True CONTIG velvet.53072 56814 correct CONTIG velvet.53080 3799 unaligned 69975308 69984653 10936 1494 NC_000014.9 velvet.53122 99.85 True fake: scaffold gap size wrong estimation (local) 69971290 69975063 15755 11982 NC_000014.9 velvet.53122 100.0 True fake: scaffold gap size wrong estimation (local) 69969396 69971116 18268 16547 NC_000014.9 velvet.53122 100.0 True fake: scaffold gap size wrong estimation (local) 69965380 69969273 22918 19025 NC_000014.9 velvet.53122 99.97 True CONTIG velvet.53122 24130 correct 64057398 64058461 1438 373 NC_000014.9 velvet.53132 99.25 True fake: scaffold gap size wrong estimation (local) 64055833 64056454 2070 1449 NC_000014.9 velvet.53132 99.52 True fake: not a misassembly (possible transposable element) 41601389 41603755 2552 4918 NC_000014.9 velvet.53132 99.92 True fake: not a misassembly (possible transposable element) 64033664 64036182 21009 18391 NC_000014.9 velvet.53132 99.84 True fake: scaffold gap size wrong estimation (local) 64032729 64033432 22306 21603 NC_000014.9 velvet.53132 99.43 True fake: scaffold gap size wrong estimation (local) 64029116 64032560 26409 22966 NC_000014.9 velvet.53132 99.62 True fake: scaffold gap size wrong estimation (local) 64028154 64028873 27809 27090 NC_000014.9 velvet.53132 99.86 True fake: scaffold gap size wrong estimation (local) 64023221 64027883 33232 28569 NC_000014.9 velvet.53132 99.94 True CONTIG velvet.53132 34253 correct CONTIG velvet.53138 457 unaligned 36813427 36814269 342 1184 NC_000014.9 velvet.53247 99.88 True fake: scaffold gap size wrong estimation (local) 36815170 36816959 2922 4763 NC_000014.9 velvet.53247 99.89 True CONTIG velvet.53247 4763 correct CONTIG velvet.53264 245 unaligned 105981818 105985614 5540 1744 NC_000014.9 velvet.53284 99.97 True CONTIG velvet.53284 5540 correct 68152104 68153102 1 1041 NC_000014.9 velvet.53291 99.9 True CONTIG velvet.53291 4097 correct 70851824 70853060 1 1237 NC_000014.9 velvet.53309 99.92 True CONTIG velvet.53309 3862 correct CONTIG velvet.53350 434 unaligned 37204053 37204616 4467 3917 NC_000014.9 velvet.53359 97.7 True fake: scaffold gap size wrong estimation (local) 37199783 37203835 10100 5567 NC_000014.9 velvet.53359 99.95 True fake: scaffold gap size wrong estimation (local) 37197388 37199531 13065 10922 NC_000014.9 velvet.53359 100.0 True fake: not a misassembly (possible transposable element) 37196816 37197347 13957 14484 NC_000014.9 velvet.53359 98.87 True fake: not a misassembly (possible transposable element) 37194632 37196759 16646 14519 NC_000014.9 velvet.53359 100.0 True CONTIG velvet.53359 19569 correct 91207162 91207739 1470 893 NC_000014.9 velvet.53391 100.0 True fake: scaffold gap size wrong estimation (local) 91203949 91205724 5500 3725 NC_000014.9 velvet.53391 99.89 True fake: scaffold gap size wrong estimation (local) 91202565 91203661 7861 6765 NC_000014.9 velvet.53391 100.0 True fake: scaffold gap size wrong estimation (local) 91195929 91196734 9805 9000 NC_000014.9 velvet.53391 99.75 True fake: scaffold gap size wrong estimation (local) 91194753 91195657 11836 10932 NC_000014.9 velvet.53391 98.78 True local misassembly 91193803 91194529 12563 11837 NC_000014.9 velvet.53391 100.0 True CONTIG velvet.53391 12563 correct CONTIG velvet.53455 202 unaligned 75828495 75829573 1080 1 NC_000014.9 velvet.53462 99.54 True fake: scaffold gap size wrong estimation (local) 75818759 75827701 11821 2650 NC_000014.9 velvet.53462 99.8 True fake: scaffold gap size wrong estimation (local) 75817253 75817808 14785 14230 NC_000014.9 velvet.53462 100.0 True fake: scaffold gap size wrong estimation (local) 75816393 75816969 16024 15448 NC_000014.9 velvet.53462 99.65 True fake: scaffold gap size wrong estimation (local) 75813576 75816175 19363 16704 NC_000014.9 velvet.53462 99.81 True fake: scaffold gap size wrong estimation (local) 75808975 75813193 24578 20432 NC_000014.9 velvet.53462 96.97 True CONTIG velvet.53462 24578 correct CONTIG velvet.53485 221 unaligned CONTIG velvet.53559 396 unaligned 77851386 77851986 1657 1057 NC_000014.9 velvet.53567 99.67 True CONTIG velvet.53567 4770 correct CONTIG velvet.53595 235 unaligned CONTIG velvet.53620 295 unaligned CONTIG velvet.53653 354 unaligned 85202189 85203659 1 1471 NC_000014.9 velvet.53664 99.93 True CONTIG velvet.53664 1471 correct 77772226 77772891 3279 3944 NC_000014.9 velvet.53760 100.0 True fake: scaffold gap size wrong estimation (local) 77774788 77775634 6603 7449 NC_000014.9 velvet.53760 100.0 True fake: scaffold gap size wrong estimation (local) 77777230 77777753 10057 10580 NC_000014.9 velvet.53760 100.0 True local misassembly 77775913 77776613 10591 11291 NC_000014.9 velvet.53760 100.0 True fake: scaffold gap size wrong estimation (local) 77780788 77781482 19136 19830 NC_000014.9 velvet.53760 100.0 True fake: scaffold gap size wrong estimation (local) 77785194 77787327 25748 27880 NC_000014.9 velvet.53760 99.91 True fake: scaffold gap size wrong estimation (local) 77788434 77788956 29796 30318 NC_000014.9 velvet.53760 100.0 True fake: scaffold gap size wrong estimation (extensive) 77807944 77808627 57368 58051 NC_000014.9 velvet.53760 100.0 True local misassembly 77808865 77809370 58052 58557 NC_000014.9 velvet.53760 97.83 True fake: scaffold gap size wrong estimation (local) 77810827 77811708 61224 62104 NC_000014.9 velvet.53760 99.66 True fake: scaffold gap size wrong estimation (local) 77816093 77816992 68064 68963 NC_000014.9 velvet.53760 100.0 True local misassembly 77817202 77817751 68964 69513 NC_000014.9 velvet.53760 97.64 True fake: scaffold gap size wrong estimation (local) 77818516 77820318 71555 73340 NC_000014.9 velvet.53760 99.05 True fake: scaffold gap size wrong estimation (local) 77821018 77821624 74008 74615 NC_000014.9 velvet.53760 99.84 True fake: scaffold gap size wrong estimation (local) 77821911 77823588 75855 77532 NC_000014.9 velvet.53760 99.88 True CONTIG velvet.53760 78022 correct CONTIG velvet.53797 362 unaligned 57526237 57526968 734 3 NC_000014.9 velvet.53828 100.0 True CONTIG velvet.53828 4096 correct CONTIG velvet.53866 354 unaligned 98111246 98112201 1 956 NC_000014.9 velvet.53885 100.0 True CONTIG velvet.53885 956 correct 95014844 95018265 1 3422 NC_000014.9 velvet.53890 99.85 True fake: scaffold gap size wrong estimation (local) 95018710 95022984 4620 8894 NC_000014.9 velvet.53890 99.32 True relocation, inconsistency = 8922 95031907 95036559 8895 13547 NC_000014.9 velvet.53890 99.57 True fake: scaffold gap size wrong estimation (local) 95036883 95038110 14670 15897 NC_000014.9 velvet.53890 99.76 True indel: indel (<= 5bp) 95038116 95044890 15898 22672 NC_000014.9 velvet.53890 99.76 True fake: scaffold gap size wrong estimation (extensive) 95044902 95049946 32310 37354 NC_000014.9 velvet.53890 99.7 True fake: scaffold gap size wrong estimation (local) 95056245 95059615 37365 41730 NC_000014.9 velvet.53890 99.46 True relocation, scaffold gap is present, inconsistency = -9317 95050309 95053437 41741 44970 NC_000014.9 velvet.53890 96.47 True relocation, scaffold gap is present, inconsistency = 39746 95004583 95009901 51186 45632 NC_000014.9 velvet.53890 99.91 True relocation, scaffold gap is present, inconsistency = -10249 95014202 95014821 51816 51197 NC_000014.9 velvet.53890 99.52 True fake: scaffold gap size wrong estimation (local) 95011376 95014057 54698 51974 NC_000014.9 velvet.53890 99.81 True relocation, scaffold gap is present, inconsistency = 48780 95062897 95076678 54758 68474 NC_000014.9 velvet.53890 97.92 True relocation, scaffold gap is present, inconsistency = 70893 94984276 94984889 76203 75589 NC_000014.9 velvet.53890 99.67 True fake: scaffold gap size wrong estimation (local) 94981142 94983890 79512 76691 NC_000014.9 velvet.53890 99.85 True relocation, scaffold gap is present, inconsistency = 92982 95076903 95078026 79543 80666 NC_000014.9 velvet.53890 99.73 True fake: scaffold gap size wrong estimation (local) 95078751 95081501 81585 84335 NC_000014.9 velvet.53890 99.02 True indel: stretch of mismatches 95081515 95083208 84349 86042 NC_000014.9 velvet.53890 99.88 True local misassembly 95089221 95090182 86043 87004 NC_000014.9 velvet.53890 98.96 True fake: scaffold gap size wrong estimation (local) 95090183 95099312 87068 96197 NC_000014.9 velvet.53890 99.74 True fake: scaffold gap size wrong estimation (local) 95099776 95107268 97366 104858 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 95107541 95109437 105872 107768 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 95111807 95122960 110658 122162 NC_000014.9 velvet.53890 99.98 True relocation, scaffold gap is present, inconsistency = 110121 95000599 95001675 123250 122173 NC_000014.9 velvet.53890 99.91 True fake: scaffold gap size wrong estimation (local) 94988360 94996247 132506 123447 NC_000014.9 velvet.53890 99.88 True fake: scaffold gap size wrong estimation (local) 94987238 94988097 134468 133609 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 94961379 94965268 157873 153984 NC_000014.9 velvet.53890 99.97 True fake: scaffold gap size wrong estimation (local) 94954614 94961126 165634 158935 NC_000014.9 velvet.53890 99.88 True relocation, scaffold gap is present, inconsistency = -18868 94969372 94973471 169772 165645 NC_000014.9 velvet.53890 99.13 True relocation, scaffold gap is present, inconsistency = 35688828 59272438 59280533 177947 169783 NC_000014.9 velvet.53890 99.63 True relocation, scaffold gap is present, inconsistency = 35557847 94838391 94841363 177958 180929 NC_000014.9 velvet.53890 99.83 True fake: scaffold gap size wrong estimation (local) 94842541 94843722 183135 184312 NC_000014.9 velvet.53890 97.74 True fake: scaffold gap size wrong estimation (local) 94843817 94847244 184474 187880 NC_000014.9 velvet.53890 99.3 True fake: scaffold gap size wrong estimation (local) 94871555 94872298 210343 211114 NC_000014.9 velvet.53890 95.85 True fake: scaffold gap size wrong estimation (local) 94876036 94878144 211414 213572 NC_000014.9 velvet.53890 99.95 True relocation, scaffold gap is present, inconsistency = 49453 94929344 94932784 218759 215319 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = 35683167 59244243 59246166 220693 218770 NC_000014.9 velvet.53890 99.9 True relocation, scaffold gap is present, inconsistency = 35601393 94847839 94849678 220973 222811 NC_000014.9 velvet.53890 99.84 True fake: scaffold gap size wrong estimation (local) 94878460 94885755 253525 260873 NC_000014.9 velvet.53890 98.67 True inversion, scaffold gap is present 94894657 94897636 267014 264035 NC_000014.9 velvet.53890 99.5 True fake: not a misassembly (possible transposable element) 59209926 59213340 270448 267025 NC_000014.9 velvet.53890 99.88 True fake: not a misassembly (possible transposable element) 94890790 94893149 272818 270459 NC_000014.9 velvet.53890 99.87 True fake: scaffold gap size wrong estimation (local) 94885817 94889110 278559 275266 NC_000014.9 velvet.53890 99.85 True relocation, scaffold gap is present, inconsistency = 4525880 90359031 90359926 279465 278570 NC_000014.9 velvet.53890 99.89 True fake: scaffold gap size wrong estimation (local) 90358205 90358827 280658 280036 NC_000014.9 velvet.53890 98.23 True local misassembly 90357081 90357876 281454 280659 NC_000014.9 velvet.53890 99.75 True relocation, scaffold gap is present, inconsistency = 4502629 94860516 94862459 281465 283401 NC_000014.9 velvet.53890 99.59 True fake: scaffold gap size wrong estimation (local) 94862719 94863571 283499 284380 NC_000014.9 velvet.53890 96.49 True relocation, scaffold gap is present, inconsistency = 50081522 44775930 44780169 289647 285408 NC_000014.9 velvet.53890 99.98 True relocation, scaffold gap is present, inconsistency = -9780606 54555197 54556525 290986 289658 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = -35212420 89765739 89767606 292863 290997 NC_000014.9 velvet.53890 99.89 True relocation, scaffold gap is present, inconsistency = 26637129 63126936 63128599 292874 294537 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = 31739745 94868355 94869674 295867 294548 NC_000014.9 velvet.53890 99.77 True relocation, scaffold gap is present, inconsistency = 21604392 73258702 73263952 295878 301128 NC_000014.9 velvet.53890 99.92 True fake: not a misassembly (possible transposable element) 44762329 44764595 303405 301139 NC_000014.9 velvet.53890 100.0 True fake: not a misassembly (possible transposable element) 73263996 73265276 303416 304696 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = 28484327 44753143 44762078 331319 322287 NC_000014.9 velvet.53890 99.97 True relocation, scaffold gap is present, inconsistency = -45572434 90324672 90325566 332224 331330 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 90320468 90324402 337233 333175 NC_000014.9 velvet.53890 98.94 True relocation, scaffold gap is present, inconsistency = 45576025 44742508 44744211 339158 337465 NC_000014.9 velvet.53890 99.17 True fake: scaffold gap size wrong estimation (local) 44737202 44742393 345886 339972 NC_000014.9 velvet.53890 98.63 True fake: scaffold gap size wrong estimation (local) 44735258 44737010 348149 346397 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 44731858 44734970 352320 349207 NC_000014.9 velvet.53890 99.78 True fake: scaffold gap size wrong estimation (local) 44728094 44731682 356863 353275 NC_000014.9 velvet.53890 99.92 True fake: scaffold gap size wrong estimation (local) 44723099 44727804 362608 357912 NC_000014.9 velvet.53890 99.7 True relocation, scaffold gap is present, inconsistency = 59680069 104408034 104409626 362769 364361 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 104409920 104410989 364838 365907 NC_000014.9 velvet.53890 100.0 True inversion, scaffold gap is present 104402469 104407831 371347 365918 NC_000014.9 velvet.53890 98.58 True fake: not a misassembly (possible transposable element) 94419212 94420013 372211 371372 NC_000014.9 velvet.53890 98.03 True fake: not a misassembly (possible transposable element) 104366151 104373935 404811 397027 NC_000014.9 velvet.53890 99.99 True fake: scaffold gap size wrong estimation (local) 104348547 104354780 420029 413796 NC_000014.9 velvet.53890 99.98 True fake: scaffold gap size wrong estimation (local) 104339950 104347651 429586 421713 NC_000014.9 velvet.53890 99.99 True fake: scaffold gap size wrong estimation (extensive) 104329554 104330517 430811 429848 NC_000014.9 velvet.53890 99.9 True fake: scaffold gap size wrong estimation (local) 104327189 104329233 434122 432078 NC_000014.9 velvet.53890 99.85 True local misassembly 104325778 104327034 435379 434123 NC_000014.9 velvet.53890 100.0 True local misassembly 104323545 104324564 436399 435380 NC_000014.9 velvet.53890 99.9 True indel: indel (<= 5bp) 104322444 104323544 437501 436401 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = 29860 104355703 104365893 439800 449990 NC_000014.9 velvet.53890 99.97 True relocation, scaffold gap is present, inconsistency = 23643 104330549 104331845 451507 450205 NC_000014.9 velvet.53890 99.92 True fake: scaffold gap size wrong estimation (extensive) 104301276 104322214 473889 451518 NC_000014.9 velvet.53890 97.9 True relocation, scaffold gap is present, inconsistency = 51876 104374101 104375323 473900 475122 NC_000014.9 velvet.53890 99.84 True fake: scaffold gap size wrong estimation (local) 104375482 104382053 475346 481917 NC_000014.9 velvet.53890 99.98 True fake: scaffold gap size wrong estimation (local) 104382203 104395622 482887 496451 NC_000014.9 velvet.53890 99.84 True relocation, scaffold gap is present, inconsistency = 42332 104332030 104339860 504292 496462 NC_000014.9 velvet.53890 99.89 True fake: scaffold gap size wrong estimation (local) 104299406 104300889 530286 528803 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 104276863 104298839 553058 531526 NC_000014.9 velvet.53890 96.91 True fake: scaffold gap size wrong estimation (local) 104274619 104276086 556127 554660 NC_000014.9 velvet.53890 99.93 True fake: scaffold gap size wrong estimation (local) 104273187 104274596 559449 558040 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 104265859 104268169 564599 562289 NC_000014.9 velvet.53890 99.7 True relocation, scaffold gap is present, inconsistency = -7627 104271126 104272923 566959 565162 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 104268827 104269880 570133 569080 NC_000014.9 velvet.53890 99.81 True relocation, scaffold gap is present, inconsistency = 136850 104416225 104426634 579628 590037 NC_000014.9 velvet.53890 99.96 True fake: scaffold gap size wrong estimation (local) 104426813 104427888 590754 591829 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 104428155 104429787 592454 594086 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = 193392 104234112 104234752 594725 594097 NC_000014.9 velvet.53890 97.19 True fake: scaffold gap size wrong estimation (local) 104233292 104233838 595463 594922 NC_000014.9 velvet.53890 98.17 True fake: scaffold gap size wrong estimation (local) 104226114 104231903 604017 598228 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 104224527 104225184 606293 605636 NC_000014.9 velvet.53890 99.85 True indel: indel (<= 5bp) 104219358 104224525 611461 606294 NC_000014.9 velvet.53890 99.01 True fake: scaffold gap size wrong estimation (local) 104217583 104219357 613340 611566 NC_000014.9 velvet.53890 99.89 True local misassembly 104215676 104217075 614740 613341 NC_000014.9 velvet.53890 99.43 True relocation, scaffold gap is present, inconsistency = 211243 104431137 104440006 617559 626388 NC_000014.9 velvet.53890 99.48 True fake: scaffold gap size wrong estimation (local) 104440276 104459234 627198 648782 NC_000014.9 velvet.53890 99.74 True fake: scaffold gap size wrong estimation (local) 104459737 104461564 650116 651933 NC_000014.9 velvet.53890 99.45 True fake: scaffold gap size wrong estimation (local) 104461667 104464411 653289 656033 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 104464700 104482027 657150 674353 NC_000014.9 velvet.53890 98.63 True fake: scaffold gap size wrong estimation (local) 104490937 104492637 680398 682097 NC_000014.9 velvet.53890 99.88 True relocation, scaffold gap is present, inconsistency = -9813 104482835 104484508 682108 683781 NC_000014.9 velvet.53890 99.94 True fake: scaffold gap size wrong estimation (local) 104484784 104487630 684924 687770 NC_000014.9 velvet.53890 99.82 True fake: scaffold gap size wrong estimation (local) 104487836 104490208 688830 691248 NC_000014.9 velvet.53890 99.96 True fake: not a misassembly (possible transposable element) 104492881 104494173 693950 692658 NC_000014.9 velvet.53890 99.69 True fake: not a misassembly (possible transposable element) 104494482 104497963 693961 697441 NC_000014.9 velvet.53890 99.43 True fake: scaffold gap size wrong estimation (local) 104498221 104498834 698525 699138 NC_000014.9 velvet.53890 98.21 True fake: scaffold gap size wrong estimation (local) 104498915 104511607 701256 713935 NC_000014.9 velvet.53890 99.21 True fake: scaffold gap size wrong estimation (local) 104511902 104512577 714618 715293 NC_000014.9 velvet.53890 99.7 True fake: scaffold gap size wrong estimation (local) 104512726 104518235 716047 721556 NC_000014.9 velvet.53890 99.89 True fake: scaffold gap size wrong estimation (local) 104518535 104521485 722684 725634 NC_000014.9 velvet.53890 99.46 True fake: scaffold gap size wrong estimation (local) 104521486 104524104 727006 729624 NC_000014.9 velvet.53890 99.77 True fake: scaffold gap size wrong estimation (local) 104524490 104525428 730906 731843 NC_000014.9 velvet.53890 99.79 True fake: scaffold gap size wrong estimation (local) 104527183 104528979 734436 736198 NC_000014.9 velvet.53890 97.61 True fake: scaffold gap size wrong estimation (local) 104529257 104532910 737042 740806 NC_000014.9 velvet.53890 99.64 True fake: scaffold gap size wrong estimation (local) 104533190 104533694 742028 742532 NC_000014.9 velvet.53890 99.6 True local misassembly 104533975 104535471 742533 744029 NC_000014.9 velvet.53890 99.2 True fake: scaffold gap size wrong estimation (local) 104535801 104538389 745083 747607 NC_000014.9 velvet.53890 97.39 True fake: scaffold gap size wrong estimation (local) 104539491 104540468 749160 750137 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 104540498 104546618 750728 756848 NC_000014.9 velvet.53890 99.89 True fake: scaffold gap size wrong estimation (local) 104546750 104548627 757688 759566 NC_000014.9 velvet.53890 99.2 True fake: scaffold gap size wrong estimation (local) 104548894 104568230 760534 779834 NC_000014.9 velvet.53890 99.24 True fake: scaffold gap size wrong estimation (local) 104568514 104576843 780913 789242 NC_000014.9 velvet.53890 99.96 True fake: scaffold gap size wrong estimation (local) 104577093 104581663 790303 794794 NC_000014.9 velvet.53890 98.16 True fake: scaffold gap size wrong estimation (local) 104581671 104606219 794970 820056 NC_000014.9 velvet.53890 98.54 True fake: scaffold gap size wrong estimation (local) 104606502 104612653 821113 827366 NC_000014.9 velvet.53890 99.97 True fake: scaffold gap size wrong estimation (local) 104613185 104615919 828730 831465 NC_000014.9 velvet.53890 99.63 True fake: scaffold gap size wrong estimation (local) 104616205 104617116 832581 833492 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = 12542 104629870 104630947 834781 833704 NC_000014.9 velvet.53890 99.07 True local misassembly 104628961 104629718 835539 834782 NC_000014.9 velvet.53890 99.74 True inversion, scaffold gap is present 104621794 104623089 836539 837798 NC_000014.9 velvet.53890 97.15 True fake: scaffold gap size wrong estimation (local) 104623402 104624486 838941 840025 NC_000014.9 velvet.53890 99.91 True fake: scaffold gap size wrong estimation (local) 104624728 104625680 840137 841089 NC_000014.9 velvet.53890 99.9 True fake: scaffold gap size wrong estimation (local) 104626633 104628025 842923 844315 NC_000014.9 velvet.53890 99.28 True indel: indel (<= 5bp) 104628031 104628631 844316 844916 NC_000014.9 velvet.53890 100.0 True local misassembly 104632008 104635761 844917 848670 NC_000014.9 velvet.53890 99.65 True fake: scaffold gap size wrong estimation (local) 104635762 104637220 854390 855848 NC_000014.9 velvet.53890 99.73 True local misassembly 104637362 104641685 855849 860172 NC_000014.9 velvet.53890 99.98 True fake: scaffold gap size wrong estimation (local) 104641810 104642981 860888 862059 NC_000014.9 velvet.53890 99.91 True fake: scaffold gap size wrong estimation (local) 104643262 104645673 862941 865352 NC_000014.9 velvet.53890 99.96 True fake: scaffold gap size wrong estimation (local) 104645947 104646630 866680 867363 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 104647177 104648113 867710 868614 NC_000014.9 velvet.53890 96.22 True fake: scaffold gap size wrong estimation (local) 104649571 104653317 871343 875089 NC_000014.9 velvet.53890 99.95 True fake: scaffold gap size wrong estimation (local) 104653976 104654581 876427 877032 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 104675057 104689504 893022 908623 NC_000014.9 velvet.53890 99.88 True fake: scaffold gap size wrong estimation (local) 104690247 104705160 910186 925100 NC_000014.9 velvet.53890 99.86 True fake: scaffold gap size wrong estimation (local) 104705301 104716739 925685 937753 NC_000014.9 velvet.53890 99.88 True fake: scaffold gap size wrong estimation (local) 104717336 104718746 939193 940603 NC_000014.9 velvet.53890 99.86 True indel: indel (<= 5bp) 104718749 104719685 940604 941540 NC_000014.9 velvet.53890 99.89 True indel: indel (> 5bp) 104719722 104720371 941541 942190 NC_000014.9 velvet.53890 99.54 True local misassembly 104721369 104722974 942191 943796 NC_000014.9 velvet.53890 99.81 True indel: indel (<= 5bp) 104722976 104723994 943797 944815 NC_000014.9 velvet.53890 99.8 True fake: scaffold gap size wrong estimation (local) 104724247 104729510 945875 951138 NC_000014.9 velvet.53890 99.96 True fake: scaffold gap size wrong estimation (local) 104730501 104736742 952834 959151 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 104737043 104738036 960089 961082 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 104738299 104747549 961951 971201 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 104747789 104750977 972171 975360 NC_000014.9 velvet.53890 99.91 True fake: scaffold gap size wrong estimation (local) 104752015 104758505 977304 983794 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 104758759 104761939 984857 988037 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 104765761 104766974 992992 994205 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 104767213 104776182 996016 1004949 NC_000014.9 velvet.53890 99.59 True fake: scaffold gap size wrong estimation (local) 104776389 104779636 1006000 1009213 NC_000014.9 velvet.53890 98.95 True fake: scaffold gap size wrong estimation (local) 104779769 104783340 1010206 1013777 NC_000014.9 velvet.53890 99.92 True local misassembly 104786521 104795514 1013778 1022772 NC_000014.9 velvet.53890 99.89 True fake: scaffold gap size wrong estimation (local) 104795852 104807615 1023938 1037625 NC_000014.9 velvet.53890 98.2 True fake: scaffold gap size wrong estimation (local) 104809831 104811380 1039930 1041479 NC_000014.9 velvet.53890 99.74 True relocation, scaffold gap is present, inconsistency = 135423 104673202 104673899 1042685 1041988 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 104670804 104671625 1045381 1044560 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 104668286 104669055 1048736 1047967 NC_000014.9 velvet.53890 99.87 True local misassembly 104669690 104670662 1049711 1048747 NC_000014.9 velvet.53890 98.87 True fake: scaffold gap size wrong estimation (local) 104666990 104667527 1053400 1052863 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 104665416 104666707 1056177 1054886 NC_000014.9 velvet.53890 99.85 True local misassembly 104663583 104665061 1057656 1056178 NC_000014.9 velvet.53890 99.93 True fake: scaffold gap size wrong estimation (local) 104658963 104662782 1063191 1059302 NC_000014.9 velvet.53890 99.79 True fake: scaffold gap size wrong estimation (local) 104657826 104658875 1064467 1063418 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 104655272 104657541 1067705 1065387 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = 29421197 75233405 75233990 1067790 1068375 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = -51819958 23414043 23416039 1068386 1070382 NC_000014.9 velvet.53890 99.95 True fake: scaffold gap size wrong estimation (local) 23420299 23422590 1070393 1072684 NC_000014.9 velvet.53890 99.96 True relocation, scaffold gap is present, inconsistency = 51803699 75226300 75227615 1074008 1072695 NC_000014.9 velvet.53890 99.85 True relocation, scaffold gap is present, inconsistency = 20116560 95344368 95347366 1074201 1077613 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 95347647 95349726 1078342 1080421 NC_000014.9 velvet.53890 99.95 True fake: scaffold gap size wrong estimation (local) 95349864 95350896 1081215 1082247 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 95351144 95352569 1082769 1084193 NC_000014.9 velvet.53890 99.93 True relocation, scaffold gap is present, inconsistency = 20139735 75188155 75190202 1107447 1105400 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = 51715557 23439989 23444849 1135196 1140056 NC_000014.9 velvet.53890 99.96 True fake: scaffold gap size wrong estimation (local) 23445121 23450226 1141064 1146262 NC_000014.9 velvet.53890 99.74 True fake: scaffold gap size wrong estimation (local) 23450530 23452737 1147303 1149510 NC_000014.9 velvet.53890 99.5 True local misassembly 23453438 23455272 1149810 1151644 NC_000014.9 velvet.53890 99.73 True fake: scaffold gap size wrong estimation (local) 23455560 23456415 1152306 1153209 NC_000014.9 velvet.53890 99.17 True fake: not a misassembly (possible transposable element) 23350310 23355001 1157915 1153220 NC_000014.9 velvet.53890 99.85 True fake: not a misassembly (possible transposable element) 23456664 23457356 1157926 1158619 NC_000014.9 velvet.53890 99.57 True fake: scaffold gap size wrong estimation (local) 23457644 23459003 1158808 1160167 NC_000014.9 velvet.53890 99.93 True fake: scaffold gap size wrong estimation (local) 23459284 23460377 1161245 1162338 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 23460614 23461615 1162540 1163541 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 23468256 23471686 1165836 1169264 NC_000014.9 velvet.53890 99.74 True fake: scaffold gap size wrong estimation (extensive) 23489596 23490340 1196313 1197057 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 23492167 23493633 1199614 1201080 NC_000014.9 velvet.53890 99.93 True fake: scaffold gap size wrong estimation (local) 23493767 23497018 1201909 1205234 NC_000014.9 velvet.53890 99.54 True fake: scaffold gap size wrong estimation (local) 23503421 23504046 1206436 1207061 NC_000014.9 velvet.53890 99.68 True fake: scaffold gap size wrong estimation (local) 23505975 23507014 1210122 1211208 NC_000014.9 velvet.53890 99.9 True relocation, scaffold gap is present, inconsistency = -7604 23499421 23499957 1211219 1211755 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 23504894 23505720 1213913 1214739 NC_000014.9 velvet.53890 99.64 True fake: scaffold gap size wrong estimation (local) 23537261 23540143 1243513 1246395 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 23540288 23540939 1247037 1247688 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 23541586 23542756 1248771 1249941 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 23542956 23544019 1250237 1251297 NC_000014.9 velvet.53890 99.72 True fake: scaffold gap size wrong estimation (local) 23544315 23551683 1252407 1259775 NC_000014.9 velvet.53890 99.97 True relocation, scaffold gap is present, inconsistency = 2958288 26509988 26511515 1259792 1261294 NC_000014.9 velvet.53890 98.17 True fake: scaffold gap size wrong estimation (local) 26511766 26516922 1262339 1267496 NC_000014.9 velvet.53890 99.98 True relocation, scaffold gap is present, inconsistency = -2961769 23562732 23570386 1275075 1282729 NC_000014.9 velvet.53890 99.96 True fake: scaffold gap size wrong estimation (local) 23570678 23574190 1283832 1287392 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 23574474 23580591 1288494 1294611 NC_000014.9 velvet.53890 99.98 True fake: scaffold gap size wrong estimation (local) 23582233 23583678 1296949 1298394 NC_000014.9 velvet.53890 98.96 True fake: scaffold gap size wrong estimation (local) 23594782 23595783 1308196 1309207 NC_000014.9 velvet.53890 96.41 True fake: scaffold gap size wrong estimation (local) 23596753 23597579 1311341 1312167 NC_000014.9 velvet.53890 99.88 True relocation, scaffold gap is present, inconsistency = 63520411 87119074 87124544 1313251 1319532 NC_000014.9 velvet.53890 99.74 True relocation, scaffold gap is present, inconsistency = -63534198 23617128 23627233 1346314 1356697 NC_000014.9 velvet.53890 98.87 True relocation, scaffold gap is present, inconsistency = -27867 23600172 23603856 1357503 1361188 NC_000014.9 velvet.53890 99.81 True fake: scaffold gap size wrong estimation (local) 23608180 23609413 1361199 1362432 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = 66224492 89834379 89835481 1364008 1362906 NC_000014.9 velvet.53890 99.91 True relocation, scaffold gap is present, inconsistency = -38736 89870870 89873104 1366181 1364019 NC_000014.9 velvet.53890 96.73 True fake: scaffold gap size wrong estimation (local) 89867039 89870654 1370742 1367180 NC_000014.9 velvet.53890 98.42 True fake: scaffold gap size wrong estimation (local) 89866056 89866817 1372394 1371633 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 89860364 89865670 1378576 1373128 NC_000014.9 velvet.53890 98.42 True relocation, scaffold gap is present, inconsistency = 60632777 29211985 29227027 1394931 1379136 NC_000014.9 velvet.53890 99.89 True fake: scaffold gap size wrong estimation (local) 29209539 29211699 1398126 1395966 NC_000014.9 velvet.53890 99.91 True fake: not a misassembly (possible transposable element) 29200518 29203286 1402857 1405625 NC_000014.9 velvet.53890 99.96 True fake: not a misassembly (possible transposable element) 29193920 29200460 1412176 1405636 NC_000014.9 velvet.53890 99.88 True relocation, scaffold gap is present, inconsistency = 107752 29308341 29309184 1412305 1413148 NC_000014.9 velvet.53890 99.88 True fake: scaffold gap size wrong estimation (local) 29309312 29314411 1413799 1418960 NC_000014.9 velvet.53890 98.93 True fake: scaffold gap size wrong estimation (local) 29314800 29321121 1420048 1426422 NC_000014.9 velvet.53890 99.94 True fake: scaffold gap size wrong estimation (local) 29321407 29328240 1427498 1434316 NC_000014.9 velvet.53890 99.78 True relocation, scaffold gap is present, inconsistency = -42352 29286389 29293083 1434817 1441806 NC_000014.9 velvet.53890 99.93 True fake: scaffold gap size wrong estimation (local) 29293396 29296268 1443068 1446542 NC_000014.9 velvet.53890 99.25 True relocation, scaffold gap is present, inconsistency = -68241 29229239 29230235 1447754 1448750 NC_000014.9 velvet.53890 98.7 True local misassembly 29230242 29236299 1450539 1456596 NC_000014.9 velvet.53890 99.8 True relocation, scaffold gap is present, inconsistency = 60591597 89827907 89832027 1460727 1456607 NC_000014.9 velvet.53890 99.76 True relocation, scaffold gap is present, inconsistency = 60660116 29159714 29167780 1468804 1460738 NC_000014.9 velvet.53890 99.98 True fake: scaffold gap size wrong estimation (local) 29158383 29159418 1470548 1469513 NC_000014.9 velvet.53890 99.81 True relocation, scaffold gap is present, inconsistency = 175731 29335160 29337061 1470559 1472460 NC_000014.9 velvet.53890 99.89 True fake: scaffold gap size wrong estimation (local) 29337477 29338205 1473616 1474344 NC_000014.9 velvet.53890 98.63 True indel: indel (> 5bp) 29338221 29339201 1474345 1475325 NC_000014.9 velvet.53890 98.98 True fake: scaffold gap size wrong estimation (local) 29339202 29340569 1475630 1476997 NC_000014.9 velvet.53890 98.46 True fake: scaffold gap size wrong estimation (local) 29340849 29347746 1477999 1485651 NC_000014.9 velvet.53890 99.99 True fake: scaffold gap size wrong estimation (local) 29347970 29349704 1486409 1488143 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 29349963 29363183 1489049 1503211 NC_000014.9 velvet.53890 99.19 True fake: scaffold gap size wrong estimation (local) 29363599 29365750 1504424 1506575 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = -5756237 23609914 23610525 1506976 1507587 NC_000014.9 velvet.53890 100.0 True local misassembly 23610706 23611748 1507588 1508630 NC_000014.9 velvet.53890 98.95 True fake: scaffold gap size wrong estimation (local) 23612034 23615287 1509744 1512992 NC_000014.9 velvet.53890 99.69 True fake: scaffold gap size wrong estimation (local) 23615573 23617087 1513801 1515739 NC_000014.9 velvet.53890 99.93 True fake: scaffold gap size wrong estimation (local) 23638398 23642607 1535959 1540168 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = 13201 23656223 23656771 1540583 1541131 NC_000014.9 velvet.53890 99.64 True fake: scaffold gap size wrong estimation (local) 23657350 23659566 1542386 1544602 NC_000014.9 velvet.53890 99.77 True fake: scaffold gap size wrong estimation (local) 23659848 23671664 1545694 1557697 NC_000014.9 velvet.53890 99.8 True relocation, scaffold gap is present, inconsistency = 3885011 27556686 27563919 1565038 1557708 NC_000014.9 velvet.53890 99.85 True fake: scaffold gap size wrong estimation (local) 27552278 27556179 1570674 1566227 NC_000014.9 velvet.53890 97.59 True fake: scaffold gap size wrong estimation (local) 27549764 27552031 1573544 1571277 NC_000014.9 velvet.53890 99.87 True fake: scaffold gap size wrong estimation (local) 27541416 27549482 1583150 1574016 NC_000014.9 velvet.53890 96.15 True fake: scaffold gap size wrong estimation (local) 27535112 27541108 1590165 1584185 NC_000014.9 velvet.53890 99.65 True relocation, inconsistency = 3811903 23720996 23723208 1590166 1592375 NC_000014.9 velvet.53890 99.73 True relocation, scaffold gap is present, inconsistency = -9691 23714812 23716525 1593670 1595383 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 23716793 23720925 1596438 1600584 NC_000014.9 velvet.53890 99.54 True relocation, scaffold gap is present, inconsistency = 3796443 27518552 27519554 1602770 1601768 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 27517497 27518269 1604512 1603740 NC_000014.9 velvet.53890 99.61 True fake: scaffold gap size wrong estimation (local) 27515318 27517342 1606790 1604765 NC_000014.9 velvet.53890 99.65 True fake: scaffold gap size wrong estimation (local) 27513386 27515083 1609444 1607746 NC_000014.9 velvet.53890 99.82 True fake: scaffold gap size wrong estimation (local) 27511527 27512855 1611635 1610307 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = 3797979 23706670 23713537 1611646 1618513 NC_000014.9 velvet.53890 99.96 True relocation, scaffold gap is present, inconsistency = 10140 23746037 23747192 1640873 1642028 NC_000014.9 velvet.53890 99.91 True fake: scaffold gap size wrong estimation (local) 23747756 23752351 1643463 1648058 NC_000014.9 velvet.53890 99.83 True fake: scaffold gap size wrong estimation (local) 23752640 23756761 1649150 1653271 NC_000014.9 velvet.53890 99.93 True relocation, scaffold gap is present, inconsistency = 3747807 27504780 27509410 1658724 1653483 NC_000014.9 velvet.53890 99.76 True relocation, scaffold gap is present, inconsistency = 3700878 23772257 23778903 1683723 1690465 NC_000014.9 velvet.53890 99.71 True relocation, scaffold gap is present, inconsistency = -10713 23768201 23771332 1690476 1694200 NC_000014.9 velvet.53890 99.68 True fake: scaffold gap size wrong estimation (local) 23771422 23772040 1694334 1694952 NC_000014.9 velvet.53890 99.84 True fake: scaffold gap size wrong estimation (local) 23796493 23799829 1718154 1721541 NC_000014.9 velvet.53890 99.91 True fake: scaffold gap size wrong estimation (local) 23799993 23804196 1722448 1726651 NC_000014.9 velvet.53890 99.98 True relocation, scaffold gap is present, inconsistency = -25227 23778980 23788820 1726662 1737300 NC_000014.9 velvet.53890 99.5 True fake: scaffold gap size wrong estimation (local) 23789061 23790620 1738251 1739810 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 23793180 23793845 1742205 1742870 NC_000014.9 velvet.53890 98.5 True relocation, scaffold gap is present, inconsistency = -33200 23762358 23763257 1744583 1745481 NC_000014.9 velvet.53890 99.44 True local misassembly 23763364 23767739 1745897 1750273 NC_000014.9 velvet.53890 99.5 True fake: scaffold gap size wrong estimation (local) 23794508 23795143 1777259 1777894 NC_000014.9 velvet.53890 98.43 True fake: scaffold gap size wrong estimation (local) 23795488 23795994 1778194 1778700 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 23812530 23813102 1789639 1790211 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = -9093 23804457 23806506 1790659 1792692 NC_000014.9 velvet.53890 99.22 True fake: scaffold gap size wrong estimation (extensive) 23813714 23815842 1792703 1794831 NC_000014.9 velvet.53890 99.91 True relocation, scaffold gap is present, inconsistency = -9225 23806628 23807731 1794842 1795945 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 23807825 23809060 1796021 1797256 NC_000014.9 velvet.53890 99.68 True fake: scaffold gap size wrong estimation (local) 23823690 23830038 1809064 1815412 NC_000014.9 velvet.53890 99.95 True fake: scaffold gap size wrong estimation (local) 23830123 23832838 1816267 1818982 NC_000014.9 velvet.53890 99.96 True fake: scaffold gap size wrong estimation (local) 23833108 23836512 1820124 1823529 NC_000014.9 velvet.53890 99.62 True fake: scaffold gap size wrong estimation (local) 23836802 23845555 1824497 1833557 NC_000014.9 velvet.53890 99.92 True relocation, scaffold gap is present, inconsistency = 64780682 88656751 88657906 1865226 1864071 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 88651155 88652873 1872418 1870700 NC_000014.9 velvet.53890 99.94 True relocation, scaffold gap is present, inconsistency = 67703 88580001 88581306 1874564 1875841 NC_000014.9 velvet.53890 97.25 True fake: scaffold gap size wrong estimation (local) 88581563 88585915 1876571 1880789 NC_000014.9 velvet.53890 95.08 True fake: scaffold gap size wrong estimation (local) 88586144 88587178 1881872 1882906 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 88587461 88589875 1883791 1886204 NC_000014.9 velvet.53890 99.83 True fake: scaffold gap size wrong estimation (local) 88610772 88617162 1905699 1912200 NC_000014.9 velvet.53890 99.77 True fake: scaffold gap size wrong estimation (local) 88617441 88619115 1913207 1914921 NC_000014.9 velvet.53890 97.54 True fake: scaffold gap size wrong estimation (local) 88619973 88623114 1916624 1919767 NC_000014.9 velvet.53890 99.81 True fake: scaffold gap size wrong estimation (extensive) 88630342 88631420 1919787 1920865 NC_000014.9 velvet.53890 99.91 True fake: scaffold gap size wrong estimation (local) 88631784 88633827 1921634 1923677 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = -7190 88626648 88630045 1923688 1927085 NC_000014.9 velvet.53890 99.91 True relocation, scaffold gap is present, inconsistency = -67364325 21266387 21266896 1927752 1928261 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 21267557 21270415 1929517 1932375 NC_000014.9 velvet.53890 99.13 True relocation, scaffold gap is present, inconsistency = 67362526 88634151 88636408 1933585 1935842 NC_000014.9 velvet.53890 99.96 True fake: scaffold gap size wrong estimation (local) 88636646 88639615 1936902 1939871 NC_000014.9 velvet.53890 99.9 True fake: scaffold gap size wrong estimation (local) 88639880 88640461 1940639 1941220 NC_000014.9 velvet.53890 99.83 True relocation, scaffold gap is present, inconsistency = -67371458 21299335 21300065 1971552 1972282 NC_000014.9 velvet.53890 99.86 True fake: scaffold gap size wrong estimation (local) 21301731 21302887 1980376 1981532 NC_000014.9 velvet.53890 100.0 True local misassembly 21300739 21301517 1985595 1986373 NC_000014.9 velvet.53890 99.87 True fake: scaffold gap size wrong estimation (local) 21303171 21303745 1989056 1989630 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = 10010 21332239 21332921 2008114 2008796 NC_000014.9 velvet.53890 99.85 True fake: scaffold gap size wrong estimation (local) 21335804 21337453 2012219 2013868 NC_000014.9 velvet.53890 99.03 True fake: scaffold gap size wrong estimation (local) 21338218 21338885 2015636 2016303 NC_000014.9 velvet.53890 99.4 True inversion, scaffold gap is present 21344846 21345383 2016851 2016314 NC_000014.9 velvet.53890 99.81 True relocation, scaffold gap is present, inconsistency = -53046948 74391055 74391783 2017589 2016862 NC_000014.9 velvet.53890 99.73 True fake: scaffold gap size wrong estimation (local) 74389311 74390657 2019498 2018152 NC_000014.9 velvet.53890 99.85 True relocation, scaffold gap is present, inconsistency = 53047488 21341271 21341812 2019509 2020050 NC_000014.9 velvet.53890 100.0 True fake: not a misassembly (possible transposable element) 21343994 21344665 2021740 2021069 NC_000014.9 velvet.53890 100.0 True fake: not a misassembly (possible transposable element) 21342575 21343633 2023046 2024104 NC_000014.9 velvet.53890 99.91 True relocation, scaffold gap is present, inconsistency = 80579060 101922704 101924480 2025891 2024115 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 101921324 101922223 2028436 2027537 NC_000014.9 velvet.53890 98.78 True local misassembly 101919967 101920807 2029653 2028813 NC_000014.9 velvet.53890 99.76 True fake: scaffold gap size wrong estimation (local) 101915352 101918447 2035043 2031948 NC_000014.9 velvet.53890 99.97 True fake: scaffold gap size wrong estimation (local) 101908665 101910548 2036937 2035054 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = 91012 101815944 101816878 2037712 2038646 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 101817251 101818398 2039204 2040351 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = 93477 101911886 101915091 2043567 2040362 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 101892217 101893488 2064785 2063514 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = -16158 101907414 101908364 2065746 2064796 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 101905659 101907248 2067945 2066356 NC_000014.9 velvet.53890 100.0 True fake: not a misassembly (possible transposable element) 74369530 74370090 2085864 2085304 NC_000014.9 velvet.53890 100.0 True fake: not a misassembly (possible transposable element) 101889012 101890758 2088026 2086280 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = 33020220 68866389 68868371 2090430 2088447 NC_000014.9 velvet.53890 99.7 True local misassembly 68869695 68870463 2091218 2090450 NC_000014.9 velvet.53890 99.74 True relocation, scaffold gap is present, inconsistency = 32977727 101848569 101849715 2091597 2092743 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = -46827144 55023114 55024579 2093286 2094731 NC_000014.9 velvet.53890 98.63 True fake: scaffold gap size wrong estimation (local) 55025477 55032543 2096516 2103582 NC_000014.9 velvet.53890 99.99 True relocation, scaffold gap is present, inconsistency = 13806363 68863908 68866100 2130776 2128584 NC_000014.9 velvet.53890 99.64 True relocation, scaffold gap is present, inconsistency = -6106760 74967640 74968143 2133804 2133301 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 74966334 74966991 2135125 2134470 NC_000014.9 velvet.53890 99.39 True fake: scaffold gap size wrong estimation (local) 74958844 74966224 2143477 2135974 NC_000014.9 velvet.53890 99.85 True relocation, scaffold gap is present, inconsistency = 14768 74940946 74944065 2146608 2143488 NC_000014.9 velvet.53890 99.84 True fake: scaffold gap size wrong estimation (local) 74936347 74937478 2147750 2146619 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = 8997695 83936444 83941095 2149021 2153672 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = -35100434 48840672 48847359 2153683 2160495 NC_000014.9 velvet.53890 99.97 True relocation, scaffold gap is present, inconsistency = 43964603 92811973 92815596 2160506 2164129 NC_000014.9 velvet.53890 99.86 True relocation, scaffold gap is present, inconsistency = 3077574 89732136 89734388 2166381 2164140 NC_000014.9 velvet.53890 99.38 True relocation, scaffold gap is present, inconsistency = 5773114 83944197 83957701 2167702 2182724 NC_000014.9 velvet.53890 99.52 True relocation, scaffold gap is present, inconsistency = 6706849 90664561 90666213 2182735 2184387 NC_000014.9 velvet.53890 100.0 True local misassembly 90660450 90663460 2184398 2187408 NC_000014.9 velvet.53890 99.93 True fake: scaffold gap size wrong estimation (local) 90666461 90668132 2187419 2189090 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = 4508301 95179289 95184854 2191946 2197511 NC_000014.9 velvet.53890 99.93 True relocation, scaffold gap is present, inconsistency = -21960913 73223952 73224608 2197522 2198178 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 73226202 73227146 2200776 2201720 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 73230044 73230842 2201731 2202529 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 73236831 73240475 2202889 2206533 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = -8803 73231683 73236564 2206544 2211423 NC_000014.9 velvet.53890 99.96 True relocation, scaffold gap is present, inconsistency = 17439262 90675837 90681958 2211434 2217638 NC_000014.9 velvet.53890 99.82 True relocation, scaffold gap is present, inconsistency = -12812430 77869999 77871391 2218109 2219501 NC_000014.9 velvet.53890 99.78 True fake: scaffold gap size wrong estimation (local) 77871587 77872689 2220378 2221480 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = 21581481 99454373 99455904 2221683 2223213 NC_000014.9 velvet.53890 99.87 True fake: not a misassembly (possible transposable element) 73246870 73247515 2223542 2224187 NC_000014.9 velvet.53890 100.0 True fake: not a misassembly (possible transposable element) 99456083 99458682 2224513 2227112 NC_000014.9 velvet.53890 99.88 True relocation, scaffold gap is present, inconsistency = -26208987 73249706 73256297 2227123 2233715 NC_000014.9 velvet.53890 99.95 True fake: not a misassembly (possible transposable element) 99988849 99991589 2236466 2233726 NC_000014.9 velvet.53890 100.0 True fake: not a misassembly (possible transposable element) 73265304 73266086 2236982 2237764 NC_000014.9 velvet.53890 99.87 True fake: scaffold gap size wrong estimation (local) 73266299 73271518 2238867 2244259 NC_000014.9 velvet.53890 99.92 True fake: scaffold gap size wrong estimation (local) 73273590 73277651 2246948 2251009 NC_000014.9 velvet.53890 99.93 True relocation, scaffold gap is present, inconsistency = 26197189 99474852 99477503 2251021 2253673 NC_000014.9 velvet.53890 99.66 True fake: scaffold gap size wrong estimation (local) 99510602 99512439 2283549 2285386 NC_000014.9 velvet.53890 100.0 True local misassembly 99505637 99507535 2285397 2287295 NC_000014.9 velvet.53890 99.37 True fake: scaffold gap size wrong estimation (local) 99507536 99510489 2288289 2291242 NC_000014.9 velvet.53890 99.66 True relocation, scaffold gap is present, inconsistency = -11162 99499338 99504410 2291253 2296325 NC_000014.9 velvet.53890 99.98 True fake: scaffold gap size wrong estimation (extensive) 99512459 99519120 2296336 2302994 NC_000014.9 velvet.53890 99.79 True relocation, scaffold gap is present, inconsistency = 38703 99557834 99558412 2303583 2303005 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = 24693580 74858862 74862229 2308975 2305608 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 74851859 74852838 2309936 2308986 NC_000014.9 velvet.53890 96.91 True relocation, scaffold gap is present, inconsistency = -13237 74862304 74864559 2312728 2310473 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 74852841 74857751 2317649 2312739 NC_000014.9 velvet.53890 100.0 True local misassembly 74858027 74858771 2318404 2317660 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = 19526 74832778 74833429 2323476 2324126 NC_000014.9 velvet.53890 99.69 True fake: scaffold gap size wrong estimation (local) 74833523 74834093 2324408 2324978 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 74834212 74839001 2325535 2330375 NC_000014.9 velvet.53890 99.94 True fake: scaffold gap size wrong estimation (local) 74839284 74842739 2331423 2334878 NC_000014.9 velvet.53890 99.91 True fake: scaffold gap size wrong estimation (local) 74842994 74848658 2335961 2341647 NC_000014.9 velvet.53890 99.12 True relocation, scaffold gap is present, inconsistency = 83583 74932252 74933192 2342598 2341658 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 74924837 74925569 2343341 2342609 NC_000014.9 velvet.53890 99.32 True fake: scaffold gap size wrong estimation (local) 74923992 74924535 2344099 2343556 NC_000014.9 velvet.53890 99.82 True fake: scaffold gap size wrong estimation (local) 74919163 74921765 2349758 2347110 NC_000014.9 velvet.53890 99.92 True fake: scaffold gap size wrong estimation (local) 74916630 74918890 2353203 2350936 NC_000014.9 velvet.53890 99.82 True fake: scaffold gap size wrong estimation (local) 74911143 74913273 2355301 2353214 NC_000014.9 velvet.53890 97.94 True local misassembly 74914938 74916550 2356924 2355312 NC_000014.9 velvet.53890 99.94 True fake: scaffold gap size wrong estimation (local) 74913550 74914730 2359497 2358317 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = -17506 74930519 74931045 2360034 2359508 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 74929508 74930217 2361134 2360425 NC_000014.9 velvet.53890 100.0 True indel: indel (> 5bp) 74928884 74929500 2361751 2361135 NC_000014.9 velvet.53890 98.38 True relocation, scaffold gap is present, inconsistency = 12750 74906898 74910851 2370987 2367034 NC_000014.9 velvet.53890 99.34 True fake: scaffold gap size wrong estimation (local) 74900961 74906897 2377131 2371195 NC_000014.9 velvet.53890 99.83 True local misassembly 74895859 74897921 2379194 2377132 NC_000014.9 velvet.53890 100.0 True local misassembly 74897941 74900811 2382220 2379350 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 74890937 74892168 2386857 2385626 NC_000014.9 velvet.53890 99.19 True fake: scaffold gap size wrong estimation (local) 74886859 74889364 2391657 2389123 NC_000014.9 velvet.53890 99.56 True fake: scaffold gap size wrong estimation (local) 74883296 74886429 2395972 2392839 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = -48584 74931299 74931863 2396553 2395989 NC_000014.9 velvet.53890 99.65 True relocation, scaffold gap is present, inconsistency = 16073333 58850994 58853900 2403525 2400619 NC_000014.9 velvet.53890 99.83 True fake: scaffold gap size wrong estimation (local) 58848778 58850706 2406490 2404562 NC_000014.9 velvet.53890 99.84 True fake: scaffold gap size wrong estimation (local) 58843779 58848539 2412117 2407329 NC_000014.9 velvet.53890 99.23 True fake: not a misassembly (possible transposable element) 74937768 74940577 2412128 2414937 NC_000014.9 velvet.53890 99.96 True fake: not a misassembly (possible transposable element) 58842784 58843304 2415728 2415208 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = 32730 58804793 58810043 2415739 2421040 NC_000014.9 velvet.53890 98.66 True relocation, scaffold gap is present, inconsistency = 5815876 52987879 52988906 2422078 2421051 NC_000014.9 velvet.53890 99.12 True indel: indel (<= 5bp) 52987022 52987863 2422930 2422089 NC_000014.9 velvet.53890 99.52 True fake: scaffold gap size wrong estimation (local) 52986113 52986800 2423804 2423117 NC_000014.9 velvet.53890 98.55 True fake: scaffold gap size wrong estimation (local) 52984880 52985438 2425803 2425245 NC_000014.9 velvet.53890 97.85 True indel: indel (> 5bp) 52984289 52984866 2426381 2425804 NC_000014.9 velvet.53890 99.65 True relocation, scaffold gap is present, inconsistency = 39152626 92137503 92138446 2426392 2427335 NC_000014.9 velvet.53890 100.0 True inversion, scaffold gap is present 92141469 92146236 2433531 2428767 NC_000014.9 velvet.53890 99.94 True relocation, scaffold gap is present, inconsistency = 48581981 43556407 43559477 2433542 2436612 NC_000014.9 velvet.53890 99.97 True relocation, scaffold gap is present, inconsistency = 1205181 44764669 44769944 2436623 2442145 NC_000014.9 velvet.53890 99.98 True relocation, scaffold gap is present, inconsistency = 47387670 92166125 92166999 2451561 2450656 NC_000014.9 velvet.53890 95.39 True relocation, scaffold gap is present, inconsistency = -7070 92170112 92173184 2454644 2451572 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 92163991 92165223 2456704 2455472 NC_000014.9 velvet.53890 99.03 True local misassembly 92163164 92163715 2457256 2456705 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = 47359731 44791445 44798456 2462233 2469244 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 44799651 44804091 2471180 2476351 NC_000014.9 velvet.53890 99.03 True fake: scaffold gap size wrong estimation (local) 44842307 44844730 2508002 2510425 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 44845037 44846719 2511355 2513037 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 44846900 44851409 2513859 2518489 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 44852592 44853153 2520651 2521212 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 44884909 44888169 2548361 2551621 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 44888452 44891219 2552699 2555464 NC_000014.9 velvet.53890 99.93 True fake: scaffold gap size wrong estimation (local) 44891930 44893378 2557045 2558493 NC_000014.9 velvet.53890 99.93 True local misassembly 44893552 44894187 2558494 2559129 NC_000014.9 velvet.53890 98.43 True fake: scaffold gap size wrong estimation (local) 44895517 44897394 2561230 2563107 NC_000014.9 velvet.53890 95.9 True fake: scaffold gap size wrong estimation (local) 44897575 44899848 2564073 2566346 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 44900133 44902500 2567415 2569782 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 44902624 44907685 2570729 2575790 NC_000014.9 velvet.53890 99.98 True relocation, scaffold gap is present, inconsistency = -28613 44881087 44881621 2577805 2578339 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 44881907 44884797 2579055 2582083 NC_000014.9 velvet.53890 96.97 True relocation, scaffold gap is present, inconsistency = 25208 44914239 44916202 2586317 2588280 NC_000014.9 velvet.53890 99.95 True fake: scaffold gap size wrong estimation (local) 44918270 44919198 2590581 2591509 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 44919500 44921478 2592005 2594027 NC_000014.9 velvet.53890 99.95 True relocation, scaffold gap is present, inconsistency = -12519 44908970 44909489 2594038 2594557 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 44909770 44910435 2595379 2596044 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 44910665 44912054 2596605 2597994 NC_000014.9 velvet.53890 99.93 True fake: scaffold gap size wrong estimation (local) 44912812 44913624 2599100 2599891 NC_000014.9 velvet.53890 97.05 True fake: scaffold gap size wrong estimation (local) 44924165 44926522 2605500 2607857 NC_000014.9 velvet.53890 100.0 True local misassembly 44921705 44923433 2607868 2609595 NC_000014.9 velvet.53890 99.94 True fake: scaffold gap size wrong estimation (local) 44926808 44933323 2609606 2617079 NC_000014.9 velvet.53890 98.53 True fake: scaffold gap size wrong estimation (local) 44933476 44935900 2618174 2620598 NC_000014.9 velvet.53890 99.96 True fake: scaffold gap size wrong estimation (local) 44940257 44940884 2630618 2631245 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 44941665 44943416 2632939 2634734 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 44943997 44946572 2636075 2638650 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 44946857 44965891 2639723 2660450 NC_000014.9 velvet.53890 99.76 True fake: scaffold gap size wrong estimation (local) 44966934 44968303 2662211 2663580 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 44972067 44974543 2663591 2666067 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 44975842 44977250 2668140 2669548 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 44978737 44980481 2671580 2673324 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 44980627 44981857 2673570 2674800 NC_000014.9 velvet.53890 99.92 True fake: scaffold gap size wrong estimation (local) 44982140 44985028 2675761 2678627 NC_000014.9 velvet.53890 99.24 True fake: scaffold gap size wrong estimation (local) 44985265 44986573 2679721 2681029 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = 18365 45005536 45007305 2683396 2681627 NC_000014.9 velvet.53890 100.0 True relocation, scaffold gap is present, inconsistency = 10596 44993295 44994116 2685041 2684220 NC_000014.9 velvet.53890 100.0 True inversion, scaffold gap is present 44994414 44996538 2687222 2689319 NC_000014.9 velvet.53890 98.72 True fake: scaffold gap size wrong estimation (local) 44997438 45000007 2691190 2693800 NC_000014.9 velvet.53890 95.65 True fake: scaffold gap size wrong estimation (local) 45000488 45002735 2695157 2697345 NC_000014.9 velvet.53890 96.95 True fake: scaffold gap size wrong estimation (local) 45002990 45004938 2698415 2700358 NC_000014.9 velvet.53890 99.74 True fake: scaffold gap size wrong estimation (local) 45007356 45008256 2703226 2704126 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 45008362 45014071 2704315 2710020 NC_000014.9 velvet.53890 99.93 True fake: scaffold gap size wrong estimation (local) 45014265 45015068 2710695 2711498 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 45015357 45017628 2712278 2714542 NC_000014.9 velvet.53890 96.3 True fake: scaffold gap size wrong estimation (local) 45017855 45023355 2715714 2720969 NC_000014.9 velvet.53890 95.29 True fake: scaffold gap size wrong estimation (local) 45024045 45025310 2722480 2723745 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 45025596 45026746 2724381 2725531 NC_000014.9 velvet.53890 99.91 True fake: scaffold gap size wrong estimation (local) 45027041 45029860 2726291 2729210 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 45030124 45031904 2730268 2732017 NC_000014.9 velvet.53890 98.26 True fake: scaffold gap size wrong estimation (local) 45032165 45032998 2732341 2733174 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 45033284 45033913 2735199 2735828 NC_000014.9 velvet.53890 100.0 True fake: scaffold gap size wrong estimation (local) 45034170 45035221 2736281 2737332 NC_000014.9 velvet.53890 100.0 True local misassembly 45035352 45035934 2737333 2737915 NC_000014.9 velvet.53890 98.28 True fake: scaffold gap size wrong estimation (local) 45036165 45036913 2738760 2739509 NC_000014.9 velvet.53890 99.73 True fake: scaffold gap size wrong estimation (local) 45037063 45037772 2739641 2740350 NC_000014.9 velvet.53890 100.0 True CONTIG velvet.53890 2740419 misassembled CONTIG velvet.53896 455 unaligned CONTIG velvet.53910 493 unaligned CONTIG velvet.53921 234 unaligned CONTIG velvet.53958 349 unaligned CONTIG velvet.53984 211 unaligned 35052466 35053707 11463 10222 NC_000014.9 velvet.53993 100.0 True CONTIG velvet.53993 11463 correct_unaligned 70922761 70923276 516 1 NC_000014.9 velvet.54011 100.0 True CONTIG velvet.54011 516 correct CONTIG velvet.54051 218 unaligned 87429871 87433437 1 3571 NC_000014.9 velvet.54065 99.94 True fake: scaffold gap size wrong estimation (local) 87433722 87436194 4654 7126 NC_000014.9 velvet.54065 100.0 True fake: scaffold gap size wrong estimation (local) 87442306 87448147 9799 15640 NC_000014.9 velvet.54065 99.98 True fake: scaffold gap size wrong estimation (local) 87448442 87451653 16723 19885 NC_000014.9 velvet.54065 98.44 True fake: scaffold gap size wrong estimation (local) 87451946 87455838 20976 24868 NC_000014.9 velvet.54065 99.97 True fake: scaffold gap size wrong estimation (local) 87456134 87468047 25946 38038 NC_000014.9 velvet.54065 99.45 True fake: scaffold gap size wrong estimation (local) 87468159 87471196 38899 41936 NC_000014.9 velvet.54065 99.97 True fake: scaffold gap size wrong estimation (local) 87471389 87476358 43027 47934 NC_000014.9 velvet.54065 98.75 True fake: scaffold gap size wrong estimation (local) 87479745 87480561 47945 48761 NC_000014.9 velvet.54065 100.0 True fake: scaffold gap size wrong estimation (local) 87480830 87495169 49581 63922 NC_000014.9 velvet.54065 99.37 True fake: scaffold gap size wrong estimation (local) 87495473 87499645 64866 69200 NC_000014.9 velvet.54065 100.0 True fake: scaffold gap size wrong estimation (local) 87499933 87504936 70218 75221 NC_000014.9 velvet.54065 99.98 True fake: scaffold gap size wrong estimation (local) 87505201 87507256 76190 78245 NC_000014.9 velvet.54065 100.0 True fake: scaffold gap size wrong estimation (local) 87507502 87511337 79164 82987 NC_000014.9 velvet.54065 99.61 True fake: scaffold gap size wrong estimation (local) 87519554 87530667 87389 98618 NC_000014.9 velvet.54065 99.82 True relocation, scaffold gap is present, inconsistency = -54155 87476523 87477476 98629 99582 NC_000014.9 velvet.54065 99.48 True fake: scaffold gap size wrong estimation (local) 87477727 87479723 99984 102041 NC_000014.9 velvet.54065 96.75 True fake: scaffold gap size wrong estimation (local) 87511399 87519362 130373 138388 NC_000014.9 velvet.54065 99.85 True relocation, scaffold gap is present, inconsistency = 105820 87625517 87633068 146414 138723 NC_000014.9 velvet.54065 99.69 True fake: scaffold gap size wrong estimation (local) 87622522 87625233 150134 147424 NC_000014.9 velvet.54065 99.96 True relocation, scaffold gap is present, inconsistency = 82312 87530679 87540199 150145 160285 NC_000014.9 velvet.54065 98.81 True fake: scaffold gap size wrong estimation (local) 87540358 87548340 161032 169012 NC_000014.9 velvet.54065 99.9 True fake: scaffold gap size wrong estimation (local) 87548618 87549705 170117 171203 NC_000014.9 velvet.54065 99.91 True fake: scaffold gap size wrong estimation (local) 87550072 87553390 171976 175353 NC_000014.9 velvet.54065 99.97 True fake: scaffold gap size wrong estimation (local) 87559067 87562446 175364 178741 NC_000014.9 velvet.54065 99.82 True relocation, scaffold gap is present, inconsistency = 48777 87611367 87612361 178885 179880 NC_000014.9 velvet.54065 99.7 True fake: scaffold gap size wrong estimation (local) 87612582 87615031 180960 183408 NC_000014.9 velvet.54065 99.84 True fake: scaffold gap size wrong estimation (local) 87615187 87618900 183595 187429 NC_000014.9 velvet.54065 99.95 True fake: scaffold gap size wrong estimation (local) 87619094 87619774 188231 188911 NC_000014.9 velvet.54065 100.0 True fake: scaffold gap size wrong estimation (local) 87620032 87622338 189449 191732 NC_000014.9 velvet.54065 98.52 True relocation, scaffold gap is present, inconsistency = 8464 87607254 87611081 196161 192219 NC_000014.9 velvet.54065 98.76 True relocation, scaffold gap is present, inconsistency = 52314 87553662 87554929 196172 197415 NC_000014.9 velvet.54065 97.85 True fake: scaffold gap size wrong estimation (local) 87564468 87571652 200818 208138 NC_000014.9 velvet.54065 99.09 True fake: scaffold gap size wrong estimation (local) 87571854 87579849 209096 217931 NC_000014.9 velvet.54065 99.94 True fake: scaffold gap size wrong estimation (local) 87580097 87581654 218870 220426 NC_000014.9 velvet.54065 99.81 True fake: scaffold gap size wrong estimation (local) 87582178 87584705 221611 224138 NC_000014.9 velvet.54065 99.64 True fake: scaffold gap size wrong estimation (local) 87584940 87589846 225007 230599 NC_000014.9 velvet.54065 100.0 True fake: scaffold gap size wrong estimation (local) 87590095 87592281 231630 233816 NC_000014.9 velvet.54065 100.0 True relocation, scaffold gap is present, inconsistency = 31159 87556876 87558925 235876 233827 NC_000014.9 velvet.54065 99.95 True fake: scaffold gap size wrong estimation (local) 87555183 87556607 238152 236728 NC_000014.9 velvet.54065 100.0 True relocation, scaffold gap is present, inconsistency = -99019 87647290 87654191 245096 238163 NC_000014.9 velvet.54065 98.14 True fake: scaffold gap size wrong estimation (local) 87636810 87644802 256764 247969 NC_000014.9 velvet.54065 99.92 True relocation, scaffold gap is present, inconsistency = 6693216 94338498 94339595 257244 258341 NC_000014.9 velvet.54065 99.82 True relocation, scaffold gap is present, inconsistency = -13353 94326253 94337886 258352 269625 NC_000014.9 velvet.54065 96.82 True relocation, scaffold gap is present, inconsistency = -13769 94324128 94325228 269636 270736 NC_000014.9 velvet.54065 99.91 True relocation, scaffold gap is present, inconsistency = 45928 94371178 94380425 270758 280005 NC_000014.9 velvet.54065 99.75 True fake: scaffold gap size wrong estimation (local) 94385608 94390050 280051 284493 NC_000014.9 velvet.54065 99.82 True relocation, scaffold gap is present, inconsistency = -24588 94365478 94366573 284509 285603 NC_000014.9 velvet.54065 99.83 True fake: not a misassembly (possible transposable element) 94383113 94385405 285604 287896 NC_000014.9 velvet.54065 99.52 True fake: not a misassembly (possible transposable element) 94367276 94369457 287907 290088 NC_000014.9 velvet.54065 99.73 True relocation, scaffold gap is present, inconsistency = -9891 94359577 94361957 290099 292479 NC_000014.9 velvet.54065 99.33 True fake: not a misassembly (possible transposable element) 94381794 94383208 292584 293997 NC_000014.9 velvet.54065 99.72 True fake: not a misassembly (possible transposable element) 94362164 94362676 294008 294520 NC_000014.9 velvet.54065 99.81 True indel: indel (> 5bp) 94363096 94363660 294876 295440 NC_000014.9 velvet.54065 100.0 True fake: scaffold gap size wrong estimation (local) 94363938 94365161 298320 299543 NC_000014.9 velvet.54065 99.84 True fake: not a misassembly (possible transposable element) 94380470 94381823 299554 300907 NC_000014.9 velvet.54065 99.78 True fake: not a misassembly (possible transposable element) 94366674 94367229 301997 302552 NC_000014.9 velvet.54065 99.46 True relocation, scaffold gap is present, inconsistency = -6658179 87712373 87718221 305875 311723 NC_000014.9 velvet.54065 99.88 True relocation, scaffold gap is present, inconsistency = 63443 87635994 87636520 324659 324133 NC_000014.9 velvet.54065 100.0 True fake: scaffold gap size wrong estimation (local) 87633529 87635754 327625 325400 NC_000014.9 velvet.54065 99.91 True relocation, scaffold gap is present, inconsistency = 8976 87644864 87646939 327759 329834 NC_000014.9 velvet.54065 99.86 True fake: scaffold gap size wrong estimation (extensive) 87654260 87656887 329845 332424 NC_000014.9 velvet.54065 97.95 True fake: scaffold gap size wrong estimation (local) 87662671 87664622 332435 334386 NC_000014.9 velvet.54065 99.85 True relocation, scaffold gap is present, inconsistency = -7778 87657050 87658592 334592 336134 NC_000014.9 velvet.54065 99.81 True fake: scaffold gap size wrong estimation (local) 87661963 87662630 336145 336812 NC_000014.9 velvet.54065 100.0 True fake: scaffold gap size wrong estimation (local) 87682465 87693804 357471 368880 NC_000014.9 velvet.54065 99.85 True fake: scaffold gap size wrong estimation (local) 87694077 87703408 369966 379419 NC_000014.9 velvet.54065 99.73 True fake: scaffold gap size wrong estimation (local) 87703692 87712357 380519 389467 NC_000014.9 velvet.54065 99.88 True relocation, scaffold gap is present, inconsistency = 194803 87907171 87911923 394231 389478 NC_000014.9 velvet.54065 99.79 True fake: scaffold gap size wrong estimation (local) 87893469 87906370 408746 395844 NC_000014.9 velvet.54065 99.83 True fake: scaffold gap size wrong estimation (local) 87891331 87893202 411659 409788 NC_000014.9 velvet.54065 99.95 True relocation, scaffold gap is present, inconsistency = 18032 87912011 87912860 412436 413285 NC_000014.9 velvet.54065 99.65 True fake: scaffold gap size wrong estimation (local) 87913106 87913683 413565 414142 NC_000014.9 velvet.54065 99.65 True fake: scaffold gap size wrong estimation (local) 87914452 87915109 414809 415466 NC_000014.9 velvet.54065 99.7 True fake: scaffold gap size wrong estimation (local) 87915312 87921718 416506 422913 NC_000014.9 velvet.54065 99.84 True relocation, scaffold gap is present, inconsistency = -204640 87718242 87721446 424077 427281 NC_000014.9 velvet.54065 99.84 True fake: scaffold gap size wrong estimation (local) 87723816 87728465 430191 434842 NC_000014.9 velvet.54065 99.79 True fake: scaffold gap size wrong estimation (local) 87741588 87752866 445618 457087 NC_000014.9 velvet.54065 99.96 True fake: scaffold gap size wrong estimation (local) 87753314 87758334 458327 463487 NC_000014.9 velvet.54065 99.37 True fake: scaffold gap size wrong estimation (local) 87758618 87760742 464542 466666 NC_000014.9 velvet.54065 100.0 True fake: scaffold gap size wrong estimation (local) 87760743 87761277 467316 467850 NC_000014.9 velvet.54065 99.81 True fake: scaffold gap size wrong estimation (local) 87768299 87769020 468588 469309 NC_000014.9 velvet.54065 100.0 True relocation, scaffold gap is present, inconsistency = -32472 87736698 87740711 469459 473456 NC_000014.9 velvet.54065 99.43 True fake: scaffold gap size wrong estimation (local) 87740977 87741570 474219 474812 NC_000014.9 velvet.54065 100.0 True relocation, scaffold gap is present, inconsistency = -8201 87733380 87733939 474823 475382 NC_000014.9 velvet.54065 100.0 True fake: scaffold gap size wrong estimation (local) 87735221 87736648 475393 476842 NC_000014.9 velvet.54065 97.05 True relocation, scaffold gap is present, inconsistency = -15195 87721464 87723725 476853 479574 NC_000014.9 velvet.54065 99.28 True fake: scaffold gap size wrong estimation (local) 87728760 87729528 479775 480543 NC_000014.9 velvet.54065 100.0 True fake: scaffold gap size wrong estimation (local) 87730840 87733096 482495 484751 NC_000014.9 velvet.54065 99.96 True relocation, scaffold gap is present, inconsistency = 126870 87860138 87863642 488427 484923 NC_000014.9 velvet.54065 99.91 True fake: scaffold gap size wrong estimation (extensive) 87828798 87834153 512707 507353 NC_000014.9 velvet.54065 99.87 True fake: scaffold gap size wrong estimation (local) 87827838 87828498 514046 513386 NC_000014.9 velvet.54065 100.0 True fake: scaffold gap size wrong estimation (local) 87816404 87827586 526875 514733 NC_000014.9 velvet.54065 99.1 True relocation, scaffold gap is present, inconsistency = 40897 87769472 87775496 526886 532952 NC_000014.9 velvet.54065 99.93 True fake: scaffold gap size wrong estimation (local) 87804476 87811763 560055 567518 NC_000014.9 velvet.54065 99.23 True fake: scaffold gap size wrong estimation (local) 87811954 87814321 568571 570938 NC_000014.9 velvet.54065 99.87 True fake: scaffold gap size wrong estimation (local) 87814776 87816420 572173 573814 NC_000014.9 velvet.54065 99.64 True relocation, scaffold gap is present, inconsistency = -15932 87800499 87804473 573825 577830 NC_000014.9 velvet.54065 99.1 True inversion, scaffold gap is present 87796136 87800430 582171 577841 NC_000014.9 velvet.54065 100.0 True fake: scaffold gap size wrong estimation (local) 87789635 87796030 588833 582438 NC_000014.9 velvet.54065 99.89 True local misassembly 87786067 87789634 595865 592298 NC_000014.9 velvet.54065 99.72 True fake: scaffold gap size wrong estimation (extensive) 87762177 87767335 611476 606333 NC_000014.9 velvet.54065 99.71 True relocation, scaffold gap is present, inconsistency = 65634 87834409 87849900 612916 628407 NC_000014.9 velvet.54065 99.96 True fake: scaffold gap size wrong estimation (local) 87850813 87854507 630187 633905 NC_000014.9 velvet.54065 99.33 True fake: scaffold gap size wrong estimation (local) 87854775 87858109 634678 638017 NC_000014.9 velvet.54065 99.85 True CONTIG velvet.54065 640557 misassembled 25290532 25292105 1 1553 NC_000014.9 velvet.54092 98.53 True fake: scaffold gap size wrong estimation (local) 25293268 25295103 3482 5317 NC_000014.9 velvet.54092 100.0 True CONTIG velvet.54092 5676 correct CONTIG velvet.54095 315 unaligned CONTIG velvet.54096 230 unaligned 99044987 99045949 1 936 NC_000014.9 velvet.54101 96.83 True CONTIG velvet.54101 1006 correct 82701116 82701998 884 1 NC_000014.9 velvet.54122 99.66 True CONTIG velvet.54122 1291 correct CONTIG velvet.54126 215 unaligned 94893175 94893906 732 1 NC_000014.9 velvet.54137 99.86 True CONTIG velvet.54137 732 correct CONTIG velvet.54144 319 unaligned 51351560 51352455 896 1 NC_000014.9 velvet.54170 100.0 True fake: scaffold gap size wrong estimation (local) 51349159 51351005 3884 2038 NC_000014.9 velvet.54170 100.0 True fake: scaffold gap size wrong estimation (local) 51347983 51348841 6142 5284 NC_000014.9 velvet.54170 100.0 True fake: scaffold gap size wrong estimation (local) 51343512 51345645 11266 9142 NC_000014.9 velvet.54170 99.44 True fake: scaffold gap size wrong estimation (local) 51329791 51343326 25993 12235 NC_000014.9 velvet.54170 99.95 True fake: scaffold gap size wrong estimation (local) 51326441 51329508 30135 27077 NC_000014.9 velvet.54170 99.61 True fake: scaffold gap size wrong estimation (local) 51323153 51326193 34179 31139 NC_000014.9 velvet.54170 100.0 True fake: not a misassembly (possible transposable element) 64047089 64048854 34190 35955 NC_000014.9 velvet.54170 99.72 True fake: not a misassembly (possible transposable element) 51320660 51321286 39120 38494 NC_000014.9 velvet.54170 100.0 True fake: scaffold gap size wrong estimation (local) 51319391 51320388 41003 40006 NC_000014.9 velvet.54170 99.01 True fake: not a misassembly (possible transposable element) 64051337 64053728 41004 43395 NC_000014.9 velvet.54170 99.54 True fake: not a misassembly (possible transposable element) 51316841 51319372 46074 43543 NC_000014.9 velvet.54170 99.09 True indel: indel (> 5bp) 51314011 51316828 48892 46075 NC_000014.9 velvet.54170 99.82 True fake: scaffold gap size wrong estimation (local) 51305641 51312202 58749 51454 NC_000014.9 velvet.54170 99.91 True fake: scaffold gap size wrong estimation (local) 51304466 51305447 59985 59004 NC_000014.9 velvet.54170 99.8 True relocation, scaffold gap is present, inconsistency = 6628446 44666892 44668407 69189 67598 NC_000014.9 velvet.54170 99.6 True fake: scaffold gap size wrong estimation (local) 44665832 44666699 70119 69252 NC_000014.9 velvet.54170 100.0 True fake: scaffold gap size wrong estimation (local) 44661850 44664998 75356 71794 NC_000014.9 velvet.54170 100.0 True fake: scaffold gap size wrong estimation (local) 44660145 44661564 77459 76040 NC_000014.9 velvet.54170 100.0 True fake: scaffold gap size wrong estimation (local) 44655487 44660047 82745 78054 NC_000014.9 velvet.54170 99.98 True fake: scaffold gap size wrong estimation (local) 44651179 44655235 88441 83760 NC_000014.9 velvet.54170 99.83 True fake: scaffold gap size wrong estimation (local) 44645284 44651054 94518 88745 NC_000014.9 velvet.54170 99.97 True fake: scaffold gap size wrong estimation (local) 44634655 44638185 103065 99536 NC_000014.9 velvet.54170 99.97 True fake: scaffold gap size wrong estimation (local) 44602200 44625666 136379 110569 NC_000014.9 velvet.54170 99.93 True fake: scaffold gap size wrong estimation (local) 44598355 44600387 140775 138743 NC_000014.9 velvet.54170 99.9 True relocation, scaffold gap is present, inconsistency = 57891095 102491493 102493566 140786 142859 NC_000014.9 velvet.54170 100.0 True relocation, scaffold gap is present, inconsistency = 51213413 51275329 51278069 145610 142870 NC_000014.9 velvet.54170 99.93 True fake: scaffold gap size wrong estimation (local) 51274664 51275328 146542 145878 NC_000014.9 velvet.54170 99.7 True relocation, scaffold gap is present, inconsistency = 6676310 44596045 44598343 148841 146553 NC_000014.9 velvet.54170 99.48 True relocation, scaffold gap is present, inconsistency = -6708203 51303714 51304237 149375 148852 NC_000014.9 velvet.54170 99.81 True fake: scaffold gap size wrong estimation (local) 51300188 51303116 153752 150824 NC_000014.9 velvet.54170 99.97 True fake: scaffold gap size wrong estimation (local) 51294723 51300077 159708 154160 NC_000014.9 velvet.54170 99.91 True fake: scaffold gap size wrong estimation (local) 51289792 51294482 165364 160668 NC_000014.9 velvet.54170 99.94 True fake: scaffold gap size wrong estimation (local) 51287369 51289545 168571 166395 NC_000014.9 velvet.54170 100.0 True fake: scaffold gap size wrong estimation (local) 51273496 51274642 176037 174836 NC_000014.9 velvet.54170 99.91 True fake: scaffold gap size wrong estimation (local) 51267261 51272920 183780 177413 NC_000014.9 velvet.54170 99.7 True relocation, scaffold gap is present, inconsistency = 32680283 18573348 18573895 196863 197413 NC_000014.9 velvet.54170 100.0 True relocation, scaffold gap is present, inconsistency = 64611874 83190191 83193265 204909 201835 NC_000014.9 velvet.54170 99.84 True relocation, scaffold gap is present, inconsistency = 38600565 44586658 44589615 207877 204920 NC_000014.9 velvet.54170 99.97 True fake: scaffold gap size wrong estimation (local) 44585508 44586389 209706 208825 NC_000014.9 velvet.54170 99.77 True fake: scaffold gap size wrong estimation (local) 44577010 44579804 220002 217208 NC_000014.9 velvet.54170 99.79 True CONTIG velvet.54170 220002 misassembled CONTIG velvet.54232 6954 unaligned CONTIG velvet.54267 201 unaligned 19808060 19809136 1044 2110 NC_000014.9 velvet.54333 99.06 True fake: scaffold gap size wrong estimation (local) 19810146 19811276 4735 5865 NC_000014.9 velvet.54333 99.82 True fake: scaffold gap size wrong estimation (local) 19811497 19812299 7088 7890 NC_000014.9 velvet.54333 100.0 True local misassembly 19812729 19813852 7891 9014 NC_000014.9 velvet.54333 99.11 True fake: scaffold gap size wrong estimation (local) 19813875 19814712 11908 12745 NC_000014.9 velvet.54333 99.88 True CONTIG velvet.54333 16280 correct 92405942 92406937 3769 4744 NC_000014.9 velvet.54336 97.16 True CONTIG velvet.54336 4744 correct CONTIG velvet.54337 259 unaligned CONTIG velvet.54349 405 unaligned 21239777 21241031 695 1979 NC_000014.9 velvet.54383 97.51 True fake: scaffold gap size wrong estimation (local) 21241289 21242230 3266 4207 NC_000014.9 velvet.54383 99.79 True local misassembly 21242432 21242962 4208 4738 NC_000014.9 velvet.54383 95.67 True CONTIG velvet.54383 4738 correct CONTIG velvet.54387 349 unaligned CONTIG velvet.54413 375 unaligned CONTIG velvet.54519 316 unaligned CONTIG velvet.54535 232 unaligned CONTIG velvet.54565 3903 unaligned CONTIG velvet.54605 7446 unaligned 18378879 18379735 845 1 NC_000014.9 velvet.54625 98.47 True fake: scaffold gap size wrong estimation (local) 18377224 18378607 3241 1858 NC_000014.9 velvet.54625 99.93 True fake: scaffold gap size wrong estimation (local) 18374149 18374968 5887 5068 NC_000014.9 velvet.54625 100.0 True fake: scaffold gap size wrong estimation (local) 18370699 18371596 10097 9177 NC_000014.9 velvet.54625 97.18 True fake: scaffold gap size wrong estimation (local) 18332091 18333298 43724 42517 NC_000014.9 velvet.54625 99.92 True CONTIG velvet.54625 46447 correct CONTIG velvet.54684 289 unaligned 105962223 105962840 1 618 NC_000014.9 velvet.54705 99.84 True fake: scaffold gap size wrong estimation (local) 105966915 105974026 6226 13313 NC_000014.9 velvet.54705 99.65 True fake: scaffold gap size wrong estimation (local) 105974226 105974770 14273 14817 NC_000014.9 velvet.54705 100.0 True CONTIG velvet.54705 43452 correct 24591273 24592282 4025 5080 NC_000014.9 velvet.54742 99.38 True fake: scaffold gap size wrong estimation (local) 24594215 24594829 7820 8434 NC_000014.9 velvet.54742 100.0 True CONTIG velvet.54742 33656 correct 29256909 29257424 516 1 NC_000014.9 velvet.54803 99.61 True CONTIG velvet.54803 3846 correct CONTIG velvet.54804 33230 unaligned 42811892 42818834 1 8450 NC_000014.9 velvet.54936 99.75 True CONTIG velvet.54936 8450 correct 75755279 75756493 2028 814 NC_000014.9 velvet.54990 99.92 True fake: scaffold gap size wrong estimation (local) 75752271 75754978 5644 2937 NC_000014.9 velvet.54990 99.93 True fake: scaffold gap size wrong estimation (local) 75746814 75752130 11203 5816 NC_000014.9 velvet.54990 99.91 True fake: not a misassembly (possible transposable element) 34890792 34891857 13234 12169 NC_000014.9 velvet.54990 99.91 True fake: not a misassembly (possible transposable element) 75743857 75746541 15929 13245 NC_000014.9 velvet.54990 99.96 True relocation, scaffold gap is present, inconsistency = -9971887 85713878 85715733 17795 15940 NC_000014.9 velvet.54990 99.95 True fake: scaffold gap size wrong estimation (local) 85700701 85713429 31678 18958 NC_000014.9 velvet.54990 99.86 True fake: scaffold gap size wrong estimation (local) 85698030 85700473 35209 32766 NC_000014.9 velvet.54990 99.88 True fake: scaffold gap size wrong estimation (local) 85689944 85692574 37850 35220 NC_000014.9 velvet.54990 99.92 True fake: scaffold gap size wrong estimation (local) 85681797 85683746 49570 47620 NC_000014.9 velvet.54990 99.69 True fake: scaffold gap size wrong estimation (local) 85680361 85681514 51670 50517 NC_000014.9 velvet.54990 99.31 True fake: scaffold gap size wrong estimation (local) 85679181 85679827 53040 52394 NC_000014.9 velvet.54990 99.23 True relocation, scaffold gap is present, inconsistency = -9553 85686796 85688723 54976 53051 NC_000014.9 velvet.54990 99.48 True fake: scaffold gap size wrong estimation (local) 85684014 85686522 58589 56081 NC_000014.9 velvet.54990 99.48 True relocation, scaffold gap is present, inconsistency = 23976690 61702468 61707313 58600 63535 NC_000014.9 velvet.54990 99.67 True fake: scaffold gap size wrong estimation (local) 61709199 61710804 66136 67741 NC_000014.9 velvet.54990 99.88 True relocation, scaffold gap is present, inconsistency = 13997269 75708629 75717257 68297 77892 NC_000014.9 velvet.54990 98.52 True fake: scaffold gap size wrong estimation (local) 75717390 75728099 78830 89531 NC_000014.9 velvet.54990 99.86 True fake: scaffold gap size wrong estimation (local) 75728299 75730757 90567 93071 NC_000014.9 velvet.54990 99.8 True fake: scaffold gap size wrong estimation (local) 75731030 75742282 94020 105567 NC_000014.9 velvet.54990 98.48 True fake: scaffold gap size wrong estimation (local) 75742695 75743599 106380 107284 NC_000014.9 velvet.54990 100.0 True relocation, scaffold gap is present, inconsistency = -42263814 33479797 33480545 107296 108044 NC_000014.9 velvet.54990 99.87 True fake: not a misassembly (possible transposable element) 85646807 85649296 110551 108059 NC_000014.9 velvet.54990 99.52 True fake: not a misassembly (possible transposable element) 33480586 33493337 110562 123524 NC_000014.9 velvet.54990 99.99 True fake: not a misassembly (possible transposable element) 75757213 75760352 123535 126674 NC_000014.9 velvet.54990 99.84 True fake: not a misassembly (possible transposable element) 33498725 33501625 126871 129837 NC_000014.9 velvet.54990 99.06 True relocation, scaffold gap is present, inconsistency = -10264 33493356 33494997 131832 133473 NC_000014.9 velvet.54990 100.0 True relocation, scaffold gap is present, inconsistency = 42265355 75760363 75762122 133484 135243 NC_000014.9 velvet.54990 100.0 True relocation, scaffold gap is present, inconsistency = 42194130 33563542 33566203 137934 135273 NC_000014.9 velvet.54990 99.85 True relocation, scaffold gap is present, inconsistency = 63652113 97218327 97219905 137945 139523 NC_000014.9 velvet.54990 99.81 True relocation, scaffold gap is present, inconsistency = -21457498 75762418 75765609 139534 142721 NC_000014.9 velvet.54990 99.78 True relocation, scaffold gap is present, inconsistency = 9840874 85612150 85616302 152528 148388 NC_000014.9 velvet.54990 99.64 True fake: scaffold gap size wrong estimation (local) 85611142 85611868 153864 153159 NC_000014.9 velvet.54990 97.07 True fake: scaffold gap size wrong estimation (local) 85608504 85610924 157242 154822 NC_000014.9 velvet.54990 99.96 True fake: scaffold gap size wrong estimation (local) 85606714 85608209 159925 158430 NC_000014.9 velvet.54990 95.25 True relocation, scaffold gap is present, inconsistency = 9834116 75770209 75771193 161330 162314 NC_000014.9 velvet.54990 99.9 True CONTIG velvet.54990 162589 misassembled 103072532 103075977 6906 3461 NC_000014.9 velvet.55008 99.77 True fake: scaffold gap size wrong estimation (local) 103069662 103072242 10594 8014 NC_000014.9 velvet.55008 100.0 True fake: scaffold gap size wrong estimation (local) 103068301 103069079 12844 12066 NC_000014.9 velvet.55008 99.87 True CONTIG velvet.55008 16938 correct 81514282 81515124 266 1108 NC_000014.9 velvet.55012 99.76 True inversion, scaffold gap is present 81516496 81518090 2713 1119 NC_000014.9 velvet.55012 99.94 True fake: scaffold gap size wrong estimation (local) 81515096 81516227 5163 4032 NC_000014.9 velvet.55012 100.0 True fake: scaffold gap size wrong estimation (local) 81512292 81512969 8419 7742 NC_000014.9 velvet.55012 100.0 True CONTIG velvet.55012 8485 misassembled 69823814 69824440 4157 3530 NC_000014.9 velvet.55067 99.52 True fake: scaffold gap size wrong estimation (local) 69822637 69823480 5482 4639 NC_000014.9 velvet.55067 97.16 True fake: scaffold gap size wrong estimation (local) 69817958 69821387 10865 7462 NC_000014.9 velvet.55067 98.83 True CONTIG velvet.55067 12025 correct CONTIG velvet.55094 204 unaligned 25784846 25795875 624 12786 NC_000014.9 velvet.55127 99.83 True relocation, scaffold gap is present, inconsistency = -17968 25777918 25778893 12797 13772 NC_000014.9 velvet.55127 100.0 True fake: scaffold gap size wrong estimation (local) 25808361 25814376 43812 50558 NC_000014.9 velvet.55127 99.95 True CONTIG velvet.55127 52113 misassembled 35289907 35290977 22773 21703 NC_000014.9 velvet.55154 99.07 True fake: scaffold gap size wrong estimation (local) 35288800 35289315 24235 23720 NC_000014.9 velvet.55154 100.0 True fake: scaffold gap size wrong estimation (local) 35280856 35282293 26085 24648 NC_000014.9 velvet.55154 100.0 True relocation, scaffold gap is present, inconsistency = -7373 35285356 35288218 28958 26096 NC_000014.9 velvet.55154 99.97 True fake: scaffold gap size wrong estimation (local) 35278482 35279082 29569 28969 NC_000014.9 velvet.55154 98.34 True local misassembly 35277286 35278226 30510 29570 NC_000014.9 velvet.55154 100.0 True local misassembly 35279318 35279841 31044 30521 NC_000014.9 velvet.55154 100.0 True fake: scaffold gap size wrong estimation (local) 35275800 35277087 33801 32518 NC_000014.9 velvet.55154 99.61 True fake: scaffold gap size wrong estimation (local) 35257207 35258175 50546 49578 NC_000014.9 velvet.55154 100.0 True fake: scaffold gap size wrong estimation (local) 35251827 35253050 57650 56358 NC_000014.9 velvet.55154 97.36 True fake: scaffold gap size wrong estimation (local) 35249415 35249965 60819 60269 NC_000014.9 velvet.55154 100.0 True fake: not a misassembly (possible transposable element) 35236127 35237142 68620 69635 NC_000014.9 velvet.55154 100.0 True fake: not a misassembly (possible transposable element) 35233891 35234880 71790 70802 NC_000014.9 velvet.55154 99.8 True inversion, scaffold gap is present 35237191 35237753 72421 72983 NC_000014.9 velvet.55154 100.0 True fake: scaffold gap size wrong estimation (local) 35238078 35239166 73402 74490 NC_000014.9 velvet.55154 99.82 True fake: not a misassembly (possible transposable element) 35232943 35233868 75426 74501 NC_000014.9 velvet.55154 99.89 True fake: not a misassembly (possible transposable element) 35240102 35241123 77147 78212 NC_000014.9 velvet.55154 99.9 True fake: scaffold gap size wrong estimation (local) 35241409 35243287 78973 80851 NC_000014.9 velvet.55154 99.95 True fake: scaffold gap size wrong estimation (local) 35243566 35245415 81876 83962 NC_000014.9 velvet.55154 100.0 True relocation, scaffold gap is present, inconsistency = 21688 35214873 35215818 90967 90022 NC_000014.9 velvet.55154 99.89 True fake: scaffold gap size wrong estimation (local) 35209809 35214632 96677 92089 NC_000014.9 velvet.55154 95.01 True relocation, scaffold gap is present, inconsistency = -8677 35216473 35217220 98690 97943 NC_000014.9 velvet.55154 99.87 True fake: scaffold gap size wrong estimation (local) 35205455 35207863 103369 100910 NC_000014.9 velvet.55154 100.0 True fake: scaffold gap size wrong estimation (local) 35203833 35205256 105551 104128 NC_000014.9 velvet.55154 99.93 True fake: scaffold gap size wrong estimation (local) 35202883 35203578 107340 106645 NC_000014.9 velvet.55154 98.56 True fake: scaffold gap size wrong estimation (local) 35200464 35201624 109349 108189 NC_000014.9 velvet.55154 100.0 True fake: scaffold gap size wrong estimation (local) 35199333 35200179 110862 110010 NC_000014.9 velvet.55154 99.88 True fake: scaffold gap size wrong estimation (local) 35196203 35198747 114546 112002 NC_000014.9 velvet.55154 98.19 True fake: scaffold gap size wrong estimation (local) 35195024 35196202 117760 116582 NC_000014.9 velvet.55154 99.15 True fake: scaffold gap size wrong estimation (local) 35192984 35193618 120536 119902 NC_000014.9 velvet.55154 100.0 True fake: scaffold gap size wrong estimation (local) 35191911 35192732 121467 120646 NC_000014.9 velvet.55154 99.88 True CONTIG velvet.55154 129381 misassembled 34397753 34398743 3175 4164 NC_000014.9 velvet.55177 99.9 True CONTIG velvet.55177 7095 correct CONTIG velvet.55189 287 unaligned 30946968 30949365 2398 1 NC_000014.9 velvet.55202 99.92 True fake: scaffold gap size wrong estimation (local) 30945554 30946263 4661 3952 NC_000014.9 velvet.55202 99.72 True CONTIG velvet.55202 4661 correct 21439004 21440242 1 1239 NC_000014.9 velvet.55249 100.0 True fake: scaffold gap size wrong estimation (local) 21440503 21441636 2093 3226 NC_000014.9 velvet.55249 100.0 True fake: scaffold gap size wrong estimation (local) 21441921 21442483 3886 4448 NC_000014.9 velvet.55249 100.0 True fake: scaffold gap size wrong estimation (local) 21443885 21445319 5798 7232 NC_000014.9 velvet.55249 100.0 True relocation, scaffold gap is present, inconsistency = 68496529 89945013 89945939 10397 11323 NC_000014.9 velvet.55249 100.0 True CONTIG velvet.55249 11323 misassembled 84207053 84207926 1 874 NC_000014.9 velvet.55259 100.0 True CONTIG velvet.55259 874 correct 68030175 68031085 1 911 NC_000014.9 velvet.55261 100.0 True CONTIG velvet.55261 911 correct CONTIG velvet.55268 322 unaligned 30128772 30131538 6673 3907 NC_000014.9 velvet.55314 99.89 True fake: scaffold gap size wrong estimation (local) 30127943 30128499 8038 7482 NC_000014.9 velvet.55314 100.0 True fake: scaffold gap size wrong estimation (local) 30097316 30097831 37985 37470 NC_000014.9 velvet.55314 99.42 True CONTIG velvet.55314 41645 correct CONTIG velvet.55325 263 unaligned 89938965 89939788 824 1 NC_000014.9 velvet.55371 98.67 True local misassembly 89937720 89938638 1743 825 NC_000014.9 velvet.55371 100.0 True fake: scaffold gap size wrong estimation (local) 89936016 89937541 4327 2802 NC_000014.9 velvet.55371 99.93 True fake: scaffold gap size wrong estimation (local) 89932027 89935696 8850 5097 NC_000014.9 velvet.55371 99.92 True fake: scaffold gap size wrong estimation (local) 89927088 89927699 11612 11001 NC_000014.9 velvet.55371 99.51 True fake: scaffold gap size wrong estimation (local) 89914751 89918254 22418 18748 NC_000014.9 velvet.55371 99.97 True fake: scaffold gap size wrong estimation (local) 89910432 89914501 27464 23411 NC_000014.9 velvet.55371 99.58 True fake: scaffold gap size wrong estimation (local) 89909575 89910315 28841 28101 NC_000014.9 velvet.55371 100.0 True fake: scaffold gap size wrong estimation (local) 89904882 89909304 34817 29640 NC_000014.9 velvet.55371 99.93 True fake: scaffold gap size wrong estimation (local) 89898667 89903977 41674 36237 NC_000014.9 velvet.55371 99.98 True fake: scaffold gap size wrong estimation (local) 89897477 89898424 44078 43131 NC_000014.9 velvet.55371 100.0 True fake: scaffold gap size wrong estimation (local) 89886524 89892617 50407 44305 NC_000014.9 velvet.55371 99.95 True fake: scaffold gap size wrong estimation (local) 89883913 89885399 53890 52404 NC_000014.9 velvet.55371 100.0 True relocation, scaffold gap is present, inconsistency = 2516146 87354006 87354750 67651 66907 NC_000014.9 velvet.55371 100.0 True fake: scaffold gap size wrong estimation (local) 87343364 87353731 80004 68800 NC_000014.9 velvet.55371 99.65 True relocation, scaffold gap is present, inconsistency = 15430476 71910237 71912877 80015 82655 NC_000014.9 velvet.55371 99.92 True fake: scaffold gap size wrong estimation (local) 71913131 71915003 83658 85530 NC_000014.9 velvet.55371 99.95 True fake: scaffold gap size wrong estimation (local) 71915287 71917916 86479 89108 NC_000014.9 velvet.55371 99.96 True fake: scaffold gap size wrong estimation (local) 71918233 71919794 90244 91795 NC_000014.9 velvet.55371 99.23 True relocation, scaffold gap is present, inconsistency = 18037106 89956911 89962634 91806 97529 NC_000014.9 velvet.55371 99.97 True fake: scaffold gap size wrong estimation (local) 89962896 89968175 101357 106636 NC_000014.9 velvet.55371 99.83 True fake: scaffold gap size wrong estimation (local) 89968176 89969893 106722 108439 NC_000014.9 velvet.55371 99.01 True relocation, scaffold gap is present, inconsistency = -18043303 71926613 71927675 108462 109524 NC_000014.9 velvet.55371 100.0 True fake: scaffold gap size wrong estimation (local) 71927979 71930701 110781 113496 NC_000014.9 velvet.55371 99.63 True CONTIG velvet.55371 113534 misassembled CONTIG velvet.55396 3812 unaligned CONTIG velvet.55475 209 unaligned CONTIG velvet.55495 227 unaligned 106007467 106007990 1 524 NC_000014.9 velvet.55498 100.0 True CONTIG velvet.55498 709 correct 32584122 32585043 847 1768 NC_000014.9 velvet.55523 99.78 True fake: scaffold gap size wrong estimation (local) 32585524 32587232 3235 4941 NC_000014.9 velvet.55523 99.82 True CONTIG velvet.55523 4941 correct 96226656 96229854 4005 807 NC_000014.9 velvet.55536 99.94 True relocation, scaffold gap is present, inconsistency = 18142 96248007 96249489 4016 5498 NC_000014.9 velvet.55536 99.87 True inversion, scaffold gap is present 96245416 96247975 8065 5509 NC_000014.9 velvet.55536 99.88 True fake: scaffold gap size wrong estimation (local) 96235350 96245093 18901 8873 NC_000014.9 velvet.55536 98.84 True fake: scaffold gap size wrong estimation (local) 96230888 96233234 24017 21671 NC_000014.9 velvet.55536 99.96 True local misassembly 96233278 96235065 25794 24028 NC_000014.9 velvet.55536 98.76 True fake: scaffold gap size wrong estimation (local) 96219278 96226371 32940 25847 NC_000014.9 velvet.55536 99.94 True fake: not a misassembly (possible transposable element) 96196512 96199335 40092 37325 NC_000014.9 velvet.55536 98.02 True fake: not a misassembly (possible transposable element) 96200992 96206000 45111 40103 NC_000014.9 velvet.55536 99.92 True fake: scaffold gap size wrong estimation (local) 96192122 96196164 49165 45122 NC_000014.9 velvet.55536 99.75 True fake: scaffold gap size wrong estimation (local) 96191316 96192038 50475 49753 NC_000014.9 velvet.55536 99.86 True fake: scaffold gap size wrong estimation (local) 96184562 96188052 58068 54578 NC_000014.9 velvet.55536 99.97 True fake: scaffold gap size wrong estimation (local) 96175563 96184292 68049 59157 NC_000014.9 velvet.55536 99.63 True fake: scaffold gap size wrong estimation (local) 96156864 96157946 85449 84372 NC_000014.9 velvet.55536 99.54 True CONTIG velvet.55536 85449 misassembled 61766291 61767481 101 1291 NC_000014.9 velvet.55546 99.83 True fake: scaffold gap size wrong estimation (local) 61769702 61770811 3824 4933 NC_000014.9 velvet.55546 99.82 True fake: scaffold gap size wrong estimation (extensive) 61771011 61772107 13442 14538 NC_000014.9 velvet.55546 100.0 True fake: scaffold gap size wrong estimation (local) 61772532 61773420 16224 17084 NC_000014.9 velvet.55546 96.55 True CONTIG velvet.55546 25015 correct CONTIG velvet.55553 429 unaligned 42435748 42437961 4401 6614 NC_000014.9 velvet.55557 99.86 True CONTIG velvet.55557 6614 correct 102105231 102105819 24 612 NC_000014.9 velvet.55564 100.0 True fake: scaffold gap size wrong estimation (local) 102106800 102107385 1093 1678 NC_000014.9 velvet.55564 98.29 True relocation, scaffold gap is present, inconsistency = 72072493 30027475 30028000 8488 7985 NC_000014.9 velvet.55564 95.74 True fake: scaffold gap size wrong estimation (local) 30023574 30027104 13194 9591 NC_000014.9 velvet.55564 98.94 True fake: scaffold gap size wrong estimation (local) 30008265 30014874 21587 14970 NC_000014.9 velvet.55564 99.89 True fake: scaffold gap size wrong estimation (local) 30002711 30007504 27950 23155 NC_000014.9 velvet.55564 99.9 True fake: not a misassembly (possible transposable element) 102137992 102142679 27961 32646 NC_000014.9 velvet.55564 99.87 True fake: not a misassembly (possible transposable element) 29990954 30002416 44116 32657 NC_000014.9 velvet.55564 99.81 True relocation, scaffold gap is present, inconsistency = 72177625 102191031 102192204 55106 56279 NC_000014.9 velvet.55564 100.0 True fake: scaffold gap size wrong estimation (local) 102193029 102198120 57827 62973 NC_000014.9 velvet.55564 100.0 True relocation, scaffold gap is present, inconsistency = 72202661 29986116 29990357 67302 62984 NC_000014.9 velvet.55564 99.98 True relocation, scaffold gap is present, inconsistency = -37412069 67393727 67394293 71760 71194 NC_000014.9 velvet.55564 100.0 True relocation, scaffold gap is present, inconsistency = -15257 67408332 67408973 72412 71771 NC_000014.9 velvet.55564 100.0 True fake: scaffold gap size wrong estimation (local) 67406252 67407170 75053 74135 NC_000014.9 velvet.55564 98.91 True local misassembly 67405228 67405972 75798 75054 NC_000014.9 velvet.55564 100.0 True fake: scaffold gap size wrong estimation (local) 67403140 67405040 79025 76991 NC_000014.9 velvet.55564 100.0 True relocation, scaffold gap is present, inconsistency = 37420989 29970805 29971593 90371 89583 NC_000014.9 velvet.55564 99.75 True fake: scaffold gap size wrong estimation (local) 29968037 29970552 94116 91635 NC_000014.9 velvet.55564 98.63 True fake: scaffold gap size wrong estimation (local) 29961136 29965563 98641 94213 NC_000014.9 velvet.55564 99.86 True relocation, scaffold gap is present, inconsistency = 72230965 102198422 102200493 100535 102606 NC_000014.9 velvet.55564 99.95 True relocation, scaffold gap is present, inconsistency = -23476 102177028 102178137 102617 103726 NC_000014.9 velvet.55564 100.0 True local misassembly 102178386 102179453 103727 104794 NC_000014.9 velvet.55564 96.54 True fake: scaffold gap size wrong estimation (local) 102200515 102202389 119307 121181 NC_000014.9 velvet.55564 100.0 True fake: not a misassembly (possible transposable element) 102216936 102220469 122296 125829 NC_000014.9 velvet.55564 100.0 True fake: not a misassembly (possible transposable element) 102202807 102205178 125840 128211 NC_000014.9 velvet.55564 99.96 True fake: scaffold gap size wrong estimation (local) 102205292 102206094 128571 129420 NC_000014.9 velvet.55564 99.87 True fake: scaffold gap size wrong estimation (local) 102206287 102216675 130266 140664 NC_000014.9 velvet.55564 99.89 True fake: scaffold gap size wrong estimation (local) 102245491 102248475 166632 169612 NC_000014.9 velvet.55564 99.6 True fake: scaffold gap size wrong estimation (local) 102248805 102249457 170413 171065 NC_000014.9 velvet.55564 100.0 True fake: scaffold gap size wrong estimation (local) 102249721 102252212 171833 174324 NC_000014.9 velvet.55564 99.96 True fake: scaffold gap size wrong estimation (local) 102252485 102254001 175217 176733 NC_000014.9 velvet.55564 100.0 True fake: scaffold gap size wrong estimation (local) 102254288 102255084 177620 178416 NC_000014.9 velvet.55564 99.87 True local misassembly 102255314 102256134 178417 179237 NC_000014.9 velvet.55564 98.78 True fake: scaffold gap size wrong estimation (local) 102256585 102257724 180608 181747 NC_000014.9 velvet.55564 100.0 True local misassembly 102257998 102258814 181748 182564 NC_000014.9 velvet.55564 98.78 True fake: scaffold gap size wrong estimation (local) 102259100 102259801 184558 185259 NC_000014.9 velvet.55564 100.0 True relocation, scaffold gap is present, inconsistency = -168712 102091920 102092976 186090 187133 NC_000014.9 velvet.55564 97.55 True fake: scaffold gap size wrong estimation (local) 102093952 102097033 188987 192069 NC_000014.9 velvet.55564 99.94 True fake: scaffold gap size wrong estimation (local) 102111534 102112283 205728 206477 NC_000014.9 velvet.55564 100.0 True fake: scaffold gap size wrong estimation (local) 102117310 102118869 206488 208047 NC_000014.9 velvet.55564 99.94 True fake: not a misassembly (possible transposable element) 21322427 21323134 209046 208339 NC_000014.9 velvet.55564 99.58 True fake: not a misassembly (possible transposable element) 102121115 102122297 209439 210621 NC_000014.9 velvet.55564 100.0 True fake: scaffold gap size wrong estimation (local) 102123606 102124209 213373 213976 NC_000014.9 velvet.55564 100.0 True fake: scaffold gap size wrong estimation (local) 102124665 102125222 214229 214786 NC_000014.9 velvet.55564 99.64 True relocation, scaffold gap is present, inconsistency = -12941 102116248 102117307 218753 219812 NC_000014.9 velvet.55564 99.91 True fake: scaffold gap size wrong estimation (extensive) 102127071 102127749 222481 223159 NC_000014.9 velvet.55564 99.85 True relocation, scaffold gap is present, inconsistency = -66208385 35925749 35926834 229544 230629 NC_000014.9 velvet.55564 100.0 True fake: not a misassembly (possible transposable element) 102275587 102276228 230640 231281 NC_000014.9 velvet.55564 100.0 True fake: not a misassembly (possible transposable element) 35927081 35930218 231887 235023 NC_000014.9 velvet.55564 99.81 True relocation, scaffold gap is present, inconsistency = 66347410 102277639 102279314 235034 236759 NC_000014.9 velvet.55564 100.0 True fake: scaffold gap size wrong estimation (local) 102279593 102280335 237335 238077 NC_000014.9 velvet.55564 100.0 True fake: not a misassembly (possible transposable element) 35930459 35934480 238088 242109 NC_000014.9 velvet.55564 99.93 True fake: not a misassembly (possible transposable element) 102280506 102281048 242317 242849 NC_000014.9 velvet.55564 98.12 True relocation, scaffold gap is present, inconsistency = -138672 102142806 102143561 243279 244038 NC_000014.9 velvet.55564 99.21 True fake: scaffold gap size wrong estimation (local) 102148020 102148521 244382 244883 NC_000014.9 velvet.55564 99.8 True fake: scaffold gap size wrong estimation (local) 102149159 102149719 245508 246096 NC_000014.9 velvet.55564 95.08 True fake: scaffold gap size wrong estimation (local) 102149993 102151197 247228 248428 NC_000014.9 velvet.55564 99.42 True relocation, scaffold gap is present, inconsistency = -15966 102163657 102165645 276854 278843 NC_000014.9 velvet.55564 99.95 True fake: scaffold gap size wrong estimation (local) 102165916 102169568 279831 283483 NC_000014.9 velvet.55564 99.89 True fake: not a misassembly (possible transposable element) 102180138 102182962 283494 286318 NC_000014.9 velvet.55564 100.0 True fake: not a misassembly (possible transposable element) 102169828 102170635 286329 287136 NC_000014.9 velvet.55564 100.0 True relocation, scaffold gap is present, inconsistency = 134516 102308920 102309829 290905 291864 NC_000014.9 velvet.55564 100.0 True fake: scaffold gap size wrong estimation (local) 102313574 102315731 297061 299218 NC_000014.9 velvet.55564 100.0 True CONTIG velvet.55564 299218 misassembled CONTIG velvet.55566 235 unaligned CONTIG velvet.55596 217 unaligned 20119837 20127917 121 8200 NC_000014.9 velvet.55651 99.9 True fake: scaffold gap size wrong estimation (local) 20160884 20162362 38202 39625 NC_000014.9 velvet.55651 96.26 True relocation, scaffold gap is present, inconsistency = -7311 20155568 20158265 40142 42775 NC_000014.9 velvet.55651 96.92 True fake: scaffold gap size wrong estimation (local) 20158652 20160116 44039 45503 NC_000014.9 velvet.55651 100.0 True CONTIG velvet.55651 45722 misassembled 87155501 87157270 1 1846 NC_000014.9 velvet.55679 98.15 True CONTIG velvet.55679 1846 correct 55566772 55568405 1634 1 NC_000014.9 velvet.55733 100.0 True fake: scaffold gap size wrong estimation (local) 55564416 55565460 4634 3590 NC_000014.9 velvet.55733 99.81 True fake: scaffold gap size wrong estimation (local) 55561861 55564168 7945 5638 NC_000014.9 velvet.55733 99.96 True fake: scaffold gap size wrong estimation (local) 55559777 55561549 10688 8916 NC_000014.9 velvet.55733 99.94 True fake: scaffold gap size wrong estimation (local) 55558067 55559493 12864 11438 NC_000014.9 velvet.55733 99.86 True fake: scaffold gap size wrong estimation (local) 55555914 55557784 15593 13723 NC_000014.9 velvet.55733 99.95 True fake: scaffold gap size wrong estimation (local) 55552417 55554395 19752 17774 NC_000014.9 velvet.55733 100.0 True fake: scaffold gap size wrong estimation (local) 55549309 55551559 23936 21686 NC_000014.9 velvet.55733 99.82 True fake: not a misassembly (possible transposable element) 55554703 55555664 24696 25657 NC_000014.9 velvet.55733 99.9 True fake: not a misassembly (possible transposable element) 55547433 55549042 27643 25668 NC_000014.9 velvet.55733 100.0 True fake: scaffold gap size wrong estimation (local) 55545099 55547139 30494 28454 NC_000014.9 velvet.55733 99.9 True fake: scaffold gap size wrong estimation (local) 55543211 55544189 33281 32303 NC_000014.9 velvet.55733 98.67 True relocation, scaffold gap is present, inconsistency = -24571 55538740 55542805 62323 58258 NC_000014.9 velvet.55733 99.88 True CONTIG velvet.55733 89650 misassembled 88472793 88474155 1 1363 NC_000014.9 velvet.55747 100.0 True CONTIG velvet.55747 1364 correct 63817228 63817795 1 560 NC_000014.9 velvet.55755 98.59 True CONTIG velvet.55755 970 correct 99175734 99179209 3554 1 NC_000014.9 velvet.55766 99.91 True fake: scaffold gap size wrong estimation (local) 99167903 99174224 12909 5792 NC_000014.9 velvet.55766 99.81 True fake: scaffold gap size wrong estimation (local) 99163185 99167809 18495 13790 NC_000014.9 velvet.55766 99.01 True fake: scaffold gap size wrong estimation (local) 99162101 99162895 20050 19210 NC_000014.9 velvet.55766 100.0 True fake: scaffold gap size wrong estimation (local) 99153006 99161968 29750 20646 NC_000014.9 velvet.55766 99.75 True fake: scaffold gap size wrong estimation (local) 99151663 99152735 31626 30554 NC_000014.9 velvet.55766 100.0 True fake: scaffold gap size wrong estimation (local) 99140958 99142004 43521 42475 NC_000014.9 velvet.55766 100.0 True fake: scaffold gap size wrong estimation (local) 99138345 99140676 47064 44733 NC_000014.9 velvet.55766 100.0 True relocation, scaffold gap is present, inconsistency = -1764270 100896068 100902604 54470 47075 NC_000014.9 velvet.55766 99.98 True fake: scaffold gap size wrong estimation (local) 100894329 100895795 56732 55266 NC_000014.9 velvet.55766 100.0 True relocation, scaffold gap is present, inconsistency = 1742715 99149768 99151603 58561 56743 NC_000014.9 velvet.55766 98.9 True fake: scaffold gap size wrong estimation (local) 99148152 99149539 60782 59395 NC_000014.9 velvet.55766 100.0 True fake: scaffold gap size wrong estimation (local) 99145003 99147776 64628 61855 NC_000014.9 velvet.55766 99.96 True fake: scaffold gap size wrong estimation (local) 99143794 99144726 66508 65576 NC_000014.9 velvet.55766 99.89 True fake: scaffold gap size wrong estimation (local) 99142794 99143486 67628 66936 NC_000014.9 velvet.55766 100.0 True fake: scaffold gap size wrong estimation (local) 99135913 99138313 70039 67639 NC_000014.9 velvet.55766 99.96 True fake: not a misassembly (possible transposable element) 99123071 99123980 70959 70050 NC_000014.9 velvet.55766 100.0 True fake: not a misassembly (possible transposable element) 99131617 99135691 75282 71208 NC_000014.9 velvet.55766 99.88 True fake: scaffold gap size wrong estimation (local) 99121038 99121923 85120 84235 NC_000014.9 velvet.55766 100.0 True fake: scaffold gap size wrong estimation (local) 99114384 99120784 92484 86084 NC_000014.9 velvet.55766 99.84 True fake: scaffold gap size wrong estimation (local) 99108241 99114295 99383 93326 NC_000014.9 velvet.55766 99.59 True fake: scaffold gap size wrong estimation (local) 99106483 99107488 101789 100784 NC_000014.9 velvet.55766 99.7 True fake: scaffold gap size wrong estimation (local) 99104869 99106195 103591 102274 NC_000014.9 velvet.55766 98.87 True fake: scaffold gap size wrong estimation (local) 99103905 99104457 105195 104643 NC_000014.9 velvet.55766 99.64 True relocation, scaffold gap is present, inconsistency = 13059 99082747 99090121 113429 105920 NC_000014.9 velvet.55766 97.76 True fake: scaffold gap size wrong estimation (local) 99074634 99082656 121595 113528 NC_000014.9 velvet.55766 99.39 True fake: scaffold gap size wrong estimation (local) 99072167 99074029 124868 123006 NC_000014.9 velvet.55766 99.95 True fake: scaffold gap size wrong estimation (local) 99069155 99071896 128629 125886 NC_000014.9 velvet.55766 99.82 True fake: scaffold gap size wrong estimation (local) 99056762 99068869 142227 129706 NC_000014.9 velvet.55766 99.25 True fake: scaffold gap size wrong estimation (local) 99050006 99056627 149302 142682 NC_000014.9 velvet.55766 99.94 True fake: scaffold gap size wrong estimation (local) 99039097 99042755 155630 151972 NC_000014.9 velvet.55766 99.92 True local misassembly 99042789 99044420 157272 155641 NC_000014.9 velvet.55766 99.94 True fake: scaffold gap size wrong estimation (local) 99032423 99038775 163644 157283 NC_000014.9 velvet.55766 99.54 True fake: scaffold gap size wrong estimation (local) 99016834 99032101 180430 164777 NC_000014.9 velvet.55766 99.7 True relocation, scaffold gap is present, inconsistency = 66853342 32154422 32163481 189928 180441 NC_000014.9 velvet.55766 97.83 True fake: scaffold gap size wrong estimation (local) 32153653 32154176 191092 190569 NC_000014.9 velvet.55766 100.0 True fake: scaffold gap size wrong estimation (local) 32149661 32153035 195618 192244 NC_000014.9 velvet.55766 100.0 True fake: scaffold gap size wrong estimation (local) 32148188 32149157 197659 196690 NC_000014.9 velvet.55766 100.0 True fake: scaffold gap size wrong estimation (local) 32144742 32147880 201503 198365 NC_000014.9 velvet.55766 100.0 True fake: scaffold gap size wrong estimation (local) 32143517 32144483 203201 202235 NC_000014.9 velvet.55766 100.0 True fake: scaffold gap size wrong estimation (local) 32140574 32143202 206676 204048 NC_000014.9 velvet.55766 100.0 True relocation, scaffold gap is present, inconsistency = 33012221 65158326 65158885 209579 210142 NC_000014.9 velvet.55766 99.11 True fake: scaffold gap size wrong estimation (local) 65162597 65163423 210514 211340 NC_000014.9 velvet.55766 99.4 True relocation, scaffold gap is present, inconsistency = -42346898 22816536 22817133 211351 211948 NC_000014.9 velvet.55766 99.67 True fake: scaffold gap size wrong estimation (local) 22817769 22818585 212869 213685 NC_000014.9 velvet.55766 100.0 True fake: scaffold gap size wrong estimation (local) 22818883 22820546 214274 215936 NC_000014.9 velvet.55766 99.7 True fake: scaffold gap size wrong estimation (local) 22820789 22821351 216862 217424 NC_000014.9 velvet.55766 100.0 True relocation, scaffold gap is present, inconsistency = 22904270 45725632 45733497 217435 225300 NC_000014.9 velvet.55766 99.87 True relocation, scaffold gap is present, inconsistency = 13593594 32106383 32110191 250955 247147 NC_000014.9 velvet.55766 100.0 True fake: scaffold gap size wrong estimation (local) 32101950 32106121 256147 251976 NC_000014.9 velvet.55766 99.98 True relocation, scaffold gap is present, inconsistency = 77788 32022446 32023773 257863 256536 NC_000014.9 velvet.55766 100.0 True fake: scaffold gap size wrong estimation (local) 32021212 32021725 260569 260056 NC_000014.9 velvet.55766 99.61 True fake: scaffold gap size wrong estimation (local) 32013944 32017223 266504 263225 NC_000014.9 velvet.55766 99.94 True fake: scaffold gap size wrong estimation (local) 31997552 32000352 279181 276348 NC_000014.9 velvet.55766 98.45 True fake: scaffold gap size wrong estimation (local) 31996374 31997249 280774 279899 NC_000014.9 velvet.55766 100.0 True fake: scaffold gap size wrong estimation (local) 31988597 31995757 289682 282053 NC_000014.9 velvet.55766 99.85 True fake: scaffold gap size wrong estimation (local) 31982579 31983638 290994 289935 NC_000014.9 velvet.55766 98.96 True fake: scaffold gap size wrong estimation (local) 31981005 31982228 292689 291415 NC_000014.9 velvet.55766 96.37 True relocation, scaffold gap is present, inconsistency = 11275 31968025 31969719 294394 292700 NC_000014.9 velvet.55766 98.7 True fake: scaffold gap size wrong estimation (local) 31966652 31968024 296017 294645 NC_000014.9 velvet.55766 99.13 True local misassembly 31961371 31966642 302204 296933 NC_000014.9 velvet.55766 99.7 True fake: scaffold gap size wrong estimation (local) 31959850 31960932 304636 303555 NC_000014.9 velvet.55766 99.91 True fake: scaffold gap size wrong estimation (local) 31959226 31959830 307041 306437 NC_000014.9 velvet.55766 98.35 True fake: scaffold gap size wrong estimation (local) 31957221 31958261 308496 307456 NC_000014.9 velvet.55766 100.0 True fake: scaffold gap size wrong estimation (local) 31955223 31956273 311528 310478 NC_000014.9 velvet.55766 99.71 True fake: scaffold gap size wrong estimation (local) 31952768 31954577 314756 312947 NC_000014.9 velvet.55766 99.89 True relocation, scaffold gap is present, inconsistency = -25989 31944409 31952736 349221 340777 NC_000014.9 velvet.55766 99.27 True CONTIG velvet.55766 349221 misassembled CONTIG velvet.55785 7494 unaligned 22932842 22934467 2518 4143 NC_000014.9 velvet.55797 100.0 True fake: scaffold gap size wrong estimation (local) 22934978 22935639 5470 6131 NC_000014.9 velvet.55797 100.0 True CONTIG velvet.55797 9649 correct 94248523 94250759 2237 1 NC_000014.9 velvet.55818 99.96 True inversion, scaffold gap is present 94244006 94248152 2248 6496 NC_000014.9 velvet.55818 99.88 True CONTIG velvet.55818 7704 misassembled 89431986 89433156 1 1137 NC_000014.9 velvet.55820 96.73 True CONTIG velvet.55820 1137 correct 90475954 90476647 118 811 NC_000014.9 velvet.55834 100.0 True fake: scaffold gap size wrong estimation (local) 90477227 90478707 2754 4234 NC_000014.9 velvet.55834 99.93 True fake: scaffold gap size wrong estimation (local) 90479483 90480553 5541 6611 NC_000014.9 velvet.55834 98.97 True fake: scaffold gap size wrong estimation (local) 90508055 90509777 33304 35026 NC_000014.9 velvet.55834 99.88 True CONTIG velvet.55834 35026 correct 23030959 23031875 221 1137 NC_000014.9 velvet.55855 100.0 True relocation, scaffold gap is present, inconsistency = -1520451 21511939 21512466 1652 2187 NC_000014.9 velvet.55855 98.51 True fake: scaffold gap size wrong estimation (local) 21512982 21515136 3719 5878 NC_000014.9 velvet.55855 99.44 True fake: scaffold gap size wrong estimation (local) 21541636 21542163 34603 35130 NC_000014.9 velvet.55855 100.0 True fake: scaffold gap size wrong estimation (local) 21542764 21544369 36913 38518 NC_000014.9 velvet.55855 100.0 True CONTIG velvet.55855 41021 misassembled CONTIG velvet.55856 3584 unaligned CONTIG velvet.55890 410 unaligned 55765444 55766350 98 1004 NC_000014.9 velvet.55955 99.89 True fake: scaffold gap size wrong estimation (local) 55792119 55796568 25655 30100 NC_000014.9 velvet.55955 99.8 True fake: not a misassembly (possible transposable element) 55788896 55790733 30111 31945 NC_000014.9 velvet.55955 99.78 True fake: not a misassembly (possible transposable element) 55801604 55808578 31956 38674 NC_000014.9 velvet.55955 96.17 True relocation, scaffold gap is present, inconsistency = -11705 55796884 55801520 38685 44111 NC_000014.9 velvet.55955 99.89 True fake: scaffold gap size wrong estimation (extensive) 55819670 55831533 54683 67479 NC_000014.9 velvet.55955 99.93 True fake: not a misassembly (possible transposable element) 55818489 55819638 67490 68639 NC_000014.9 velvet.55955 99.91 True fake: not a misassembly (possible transposable element) 55831645 55832886 68650 69891 NC_000014.9 velvet.55955 99.84 True relocation, scaffold gap is present, inconsistency = -31228081 24605108 24610598 70194 75684 NC_000014.9 velvet.55955 99.87 True fake: scaffold gap size wrong estimation (local) 24610882 24611689 76537 77344 NC_000014.9 velvet.55955 100.0 True relocation, scaffold gap is present, inconsistency = 7049 24603286 24603822 77891 77355 NC_000014.9 velvet.55955 100.0 True fake: scaffold gap size wrong estimation (local) 24601668 24602236 79035 78467 NC_000014.9 velvet.55955 100.0 True fake: scaffold gap size wrong estimation (local) 24599990 24600906 81114 80198 NC_000014.9 velvet.55955 99.78 True relocation, scaffold gap is present, inconsistency = 10547 24612075 24617401 81736 87062 NC_000014.9 velvet.55955 100.0 True relocation, scaffold gap is present, inconsistency = 31299517 55916929 55918511 88655 87073 NC_000014.9 velvet.55955 100.0 True relocation, scaffold gap is present, inconsistency = 76184 55837356 55839345 90055 91969 NC_000014.9 velvet.55955 95.96 True fake: not a misassembly (possible transposable element) 55895521 55896392 93846 92975 NC_000014.9 velvet.55955 97.71 True fake: not a misassembly (possible transposable element) 55840659 55842078 94343 95762 NC_000014.9 velvet.55955 100.0 True fake: scaffold gap size wrong estimation (local) 55842315 55844811 96844 99340 NC_000014.9 velvet.55955 99.88 True fake: scaffold gap size wrong estimation (local) 55845070 55853950 100447 109806 NC_000014.9 velvet.55955 98.9 True fake: scaffold gap size wrong estimation (local) 55854036 55856610 110638 113210 NC_000014.9 velvet.55955 99.92 True fake: scaffold gap size wrong estimation (local) 55856741 55858160 114251 115670 NC_000014.9 velvet.55955 99.93 True relocation, scaffold gap is present, inconsistency = 29485 55890155 55894824 123045 118180 NC_000014.9 velvet.55955 99.98 True fake: scaffold gap size wrong estimation (local) 55887635 55890005 126202 123832 NC_000014.9 velvet.55955 100.0 True fake: scaffold gap size wrong estimation (local) 55883948 55887283 130799 127361 NC_000014.9 velvet.55955 100.0 True relocation, scaffold gap is present, inconsistency = -14815389 70697010 70699326 133126 130810 NC_000014.9 velvet.55955 100.0 True relocation, scaffold gap is present, inconsistency = 14823190 55872012 55873809 134934 133137 NC_000014.9 velvet.55955 99.94 True fake: scaffold gap size wrong estimation (local) 55868509 55871794 139096 135811 NC_000014.9 velvet.55955 100.0 True inversion, scaffold gap is present 55874068 55880839 139107 145870 NC_000014.9 velvet.55955 99.73 True relocation, scaffold gap is present, inconsistency = 14813723 70695391 70696746 148054 146699 NC_000014.9 velvet.55955 99.93 True fake: scaffold gap size wrong estimation (local) 70691766 70692638 151955 151083 NC_000014.9 velvet.55955 100.0 True relocation, scaffold gap is present, inconsistency = 14825982 55863747 55865773 153992 151966 NC_000014.9 velvet.55955 99.75 True relocation, scaffold gap is present, inconsistency = -9497 55865805 55868222 161431 159014 NC_000014.9 velvet.55955 100.0 True fake: scaffold gap size wrong estimation (local) 55835685 55837304 189244 187596 NC_000014.9 velvet.55955 98.0 True fake: scaffold gap size wrong estimation (local) 55834581 55835237 190887 190231 NC_000014.9 velvet.55955 100.0 True fake: scaffold gap size wrong estimation (local) 55832875 55834572 193162 191485 NC_000014.9 velvet.55955 98.7 True CONTIG velvet.55955 193162 misassembled 105561292 105562668 1695 319 NC_000014.9 velvet.56003 99.2 True fake: scaffold gap size wrong estimation (local) 105558434 105560150 5443 3762 NC_000014.9 velvet.56003 97.66 True fake: scaffold gap size wrong estimation (local) 105551520 105552081 15955 15394 NC_000014.9 velvet.56003 100.0 True fake: scaffold gap size wrong estimation (local) 105549046 105551253 21774 19595 NC_000014.9 velvet.56003 98.72 True relocation, scaffold gap is present, inconsistency = -126978 105672672 105675245 25254 22553 NC_000014.9 velvet.56003 95.51 True CONTIG velvet.56003 37617 misassembled 75798046 75798905 3299 2440 NC_000014.9 velvet.56043 98.37 True local misassembly 75797266 75797775 3809 3300 NC_000014.9 velvet.56043 100.0 True fake: scaffold gap size wrong estimation (local) 75765739 75766902 36154 34991 NC_000014.9 velvet.56043 99.83 True CONTIG velvet.56043 36154 correct CONTIG velvet.56049 213 unaligned 106197509 106203834 29877 37056 NC_000014.9 velvet.56068 99.86 True fake: not a misassembly (possible transposable element) 105861324 105863224 63501 65401 NC_000014.9 velvet.56068 99.95 True fake: not a misassembly (possible transposable element) 106235683 106236317 68009 68646 NC_000014.9 velvet.56068 98.9 True fake: scaffold gap size wrong estimation (local) 106236587 106238343 68851 70699 NC_000014.9 velvet.56068 99.71 True fake: scaffold gap size wrong estimation (local) 106238524 106239285 71702 72463 NC_000014.9 velvet.56068 99.87 True local misassembly 106239486 106242906 72464 75884 NC_000014.9 velvet.56068 99.65 True relocation, scaffold gap is present, inconsistency = 522697 105712352 105714346 80315 78327 NC_000014.9 velvet.56068 98.3 True fake: scaffold gap size wrong estimation (local) 105707764 105708626 85341 84479 NC_000014.9 velvet.56068 99.65 True relocation, scaffold gap is present, inconsistency = -524631 106231717 106232384 86019 85352 NC_000014.9 velvet.56068 100.0 True fake: scaffold gap size wrong estimation (local) 106191379 106191972 123125 122532 NC_000014.9 velvet.56068 100.0 True fake: scaffold gap size wrong estimation (local) 106188532 106189239 126825 126111 NC_000014.9 velvet.56068 99.86 True fake: scaffold gap size wrong estimation (local) 106180316 106181160 137697 136853 NC_000014.9 velvet.56068 100.0 True CONTIG velvet.56068 137697 misassembled CONTIG velvet.56076 310 unaligned CONTIG velvet.56104 274 unaligned 43074404 43078414 4120 1 NC_000014.9 velvet.56151 99.62 True CONTIG velvet.56151 4120 correct CONTIG velvet.56220 255 unaligned CONTIG velvet.56231 4182 unaligned 18475807 18476365 97115 97655 NC_000014.9 velvet.56236 95.81 True unknown 18486406 18487109 100976 101668 NC_000014.9 velvet.56236 98.13 True unknown CONTIG velvet.56236 185724 mis_unaligned 27150169 27166936 1 16767 NC_000014.9 velvet.56333 99.93 True fake: scaffold gap size wrong estimation (local) 27171238 27171856 17628 18246 NC_000014.9 velvet.56333 100.0 True fake: scaffold gap size wrong estimation (local) 27172108 27175269 19521 22683 NC_000014.9 velvet.56333 99.72 True fake: scaffold gap size wrong estimation (local) 27175538 27190994 23694 39956 NC_000014.9 velvet.56333 99.93 True fake: scaffold gap size wrong estimation (local) 27191238 27192855 41022 42639 NC_000014.9 velvet.56333 99.81 True fake: scaffold gap size wrong estimation (local) 27193629 27199827 44133 50336 NC_000014.9 velvet.56333 99.81 True fake: scaffold gap size wrong estimation (local) 27200130 27201970 51359 53199 NC_000014.9 velvet.56333 99.89 True fake: scaffold gap size wrong estimation (local) 27211021 27219258 56321 64517 NC_000014.9 velvet.56333 99.19 True fake: scaffold gap size wrong estimation (local) 27220072 27221037 66454 67419 NC_000014.9 velvet.56333 99.79 True fake: scaffold gap size wrong estimation (local) 27221782 27224311 68874 71403 NC_000014.9 velvet.56333 100.0 True fake: scaffold gap size wrong estimation (local) 27225435 27231157 73234 78956 NC_000014.9 velvet.56333 99.98 True fake: scaffold gap size wrong estimation (local) 27231205 27232808 78967 80588 NC_000014.9 velvet.56333 97.43 True fake: scaffold gap size wrong estimation (local) 27233085 27234180 81778 82873 NC_000014.9 velvet.56333 99.09 True fake: scaffold gap size wrong estimation (local) 27244199 27248245 97508 101554 NC_000014.9 velvet.56333 99.98 True relocation, scaffold gap is present, inconsistency = 62235759 89509597 89510681 128231 127147 NC_000014.9 velvet.56333 99.82 True fake: scaffold gap size wrong estimation (local) 89507135 89509317 131416 129234 NC_000014.9 velvet.56333 100.0 True fake: scaffold gap size wrong estimation (local) 89500117 89501745 133055 131427 NC_000014.9 velvet.56333 100.0 True relocation, scaffold gap is present, inconsistency = 62217677 27266368 27282429 133066 149979 NC_000014.9 velvet.56333 99.94 True fake: scaffold gap size wrong estimation (local) 27282673 27289488 150871 158100 NC_000014.9 velvet.56333 99.14 True fake: scaffold gap size wrong estimation (local) 27289818 27292500 158728 161990 NC_000014.9 velvet.56333 98.03 True fake: scaffold gap size wrong estimation (local) 27292768 27297358 162410 168411 NC_000014.9 velvet.56333 99.91 True fake: scaffold gap size wrong estimation (local) 27297453 27298086 168557 169190 NC_000014.9 velvet.56333 99.84 True fake: scaffold gap size wrong estimation (local) 27300234 27301267 172040 173040 NC_000014.9 velvet.56333 96.58 True fake: scaffold gap size wrong estimation (local) 27301604 27302320 173347 174063 NC_000014.9 velvet.56333 99.86 True fake: scaffold gap size wrong estimation (local) 27302441 27312956 174106 186007 NC_000014.9 velvet.56333 98.14 True fake: scaffold gap size wrong estimation (local) 27313249 27317389 187037 191177 NC_000014.9 velvet.56333 100.0 True fake: scaffold gap size wrong estimation (local) 27317474 27323868 191448 198103 NC_000014.9 velvet.56333 99.94 True fake: scaffold gap size wrong estimation (local) 27324138 27324894 199162 199918 NC_000014.9 velvet.56333 99.87 True fake: scaffold gap size wrong estimation (local) 27325006 27342118 200106 218653 NC_000014.9 velvet.56333 99.45 True fake: scaffold gap size wrong estimation (local) 27344126 27348317 222077 226267 NC_000014.9 velvet.56333 99.81 True fake: not a misassembly (possible transposable element) 27342944 27343996 228346 227295 NC_000014.9 velvet.56333 99.72 True fake: not a misassembly (possible transposable element) 27349051 27350767 228357 230073 NC_000014.9 velvet.56333 100.0 True fake: scaffold gap size wrong estimation (local) 27351635 27357574 235757 241864 NC_000014.9 velvet.56333 99.56 True fake: scaffold gap size wrong estimation (local) 27363380 27365446 249421 251532 NC_000014.9 velvet.56333 98.88 True fake: scaffold gap size wrong estimation (local) 27365727 27368076 252637 254976 NC_000014.9 velvet.56333 99.36 True fake: scaffold gap size wrong estimation (local) 27368337 27377965 255995 265867 NC_000014.9 velvet.56333 99.68 True fake: scaffold gap size wrong estimation (local) 27378243 27409074 266887 298562 NC_000014.9 velvet.56333 99.49 True fake: scaffold gap size wrong estimation (local) 27409430 27415329 299713 305612 NC_000014.9 velvet.56333 99.85 True fake: scaffold gap size wrong estimation (local) 27415406 27426700 305791 317219 NC_000014.9 velvet.56333 99.87 True fake: scaffold gap size wrong estimation (local) 27427411 27430827 318701 322117 NC_000014.9 velvet.56333 99.91 True fake: not a misassembly (possible transposable element) 65265344 65266101 322885 322128 NC_000014.9 velvet.56333 100.0 True fake: not a misassembly (possible transposable element) 27431124 27433657 323167 325699 NC_000014.9 velvet.56333 99.64 True relocation, scaffold gap is present, inconsistency = 37844119 65284413 65285687 333610 332336 NC_000014.9 velvet.56333 99.92 True fake: scaffold gap size wrong estimation (local) 65281561 65283835 337504 335246 NC_000014.9 velvet.56333 99.29 True relocation, scaffold gap is present, inconsistency = 17518 65262883 65264032 338664 337515 NC_000014.9 velvet.56333 100.0 True fake: scaffold gap size wrong estimation (local) 65259857 65262600 342516 339751 NC_000014.9 velvet.56333 98.92 True fake: scaffold gap size wrong estimation (local) 65259087 65259613 344077 343551 NC_000014.9 velvet.56333 100.0 True relocation, scaffold gap is present, inconsistency = -14209 65272596 65273254 344776 344119 NC_000014.9 velvet.56333 99.7 True relocation, scaffold gap is present, inconsistency = 37838087 27433722 27434498 344787 345563 NC_000014.9 velvet.56333 99.87 True relocation, scaffold gap is present, inconsistency = 17532550 44968554 44969127 347069 347642 NC_000014.9 velvet.56333 100.0 True fake: not a misassembly (possible transposable element) 65285952 65288401 350102 347653 NC_000014.9 velvet.56333 100.0 True fake: not a misassembly (possible transposable element) 44969433 44972058 350113 352738 NC_000014.9 velvet.56333 100.0 True relocation, scaffold gap is present, inconsistency = 11801807 56773876 56775355 352749 354228 NC_000014.9 velvet.56333 99.93 True fake: scaffold gap size wrong estimation (local) 56775529 56779561 354978 359070 NC_000014.9 velvet.56333 99.83 True relocation, scaffold gap is present, inconsistency = -29330641 27448931 27451801 359081 361953 NC_000014.9 velvet.56333 99.93 True relocation, scaffold gap is present, inconsistency = 63718623 91173546 91174291 365820 365075 NC_000014.9 velvet.56333 100.0 True relocation, scaffold gap is present, inconsistency = 19520898 71649492 71652637 365831 368976 NC_000014.9 velvet.56333 100.0 True fake: scaffold gap size wrong estimation (local) 71654586 71655427 371505 372346 NC_000014.9 velvet.56333 99.88 True fake: scaffold gap size wrong estimation (local) 71656357 71657109 373576 374328 NC_000014.9 velvet.56333 98.67 True fake: scaffold gap size wrong estimation (local) 71657376 71667813 375387 385870 NC_000014.9 velvet.56333 99.99 True fake: not a misassembly (possible transposable element) 71680828 71683044 385881 388097 NC_000014.9 velvet.56333 100.0 True fake: not a misassembly (possible transposable element) 71668096 71674558 388108 394669 NC_000014.9 velvet.56333 98.45 True fake: scaffold gap size wrong estimation (extensive) 71683098 71686580 394990 398472 NC_000014.9 velvet.56333 99.97 True fake: scaffold gap size wrong estimation (extensive) 71693755 71697944 398493 402682 NC_000014.9 velvet.56333 99.98 True relocation, scaffold gap is present, inconsistency = -10951 71697965 71700760 413654 416449 NC_000014.9 velvet.56333 100.0 True fake: scaffold gap size wrong estimation (local) 71701518 71706782 417941 423205 NC_000014.9 velvet.56333 99.96 True fake: scaffold gap size wrong estimation (local) 71707112 71708336 424168 425499 NC_000014.9 velvet.56333 100.0 True fake: scaffold gap size wrong estimation (local) 71710850 71714596 428852 432595 NC_000014.9 velvet.56333 99.89 True relocation, scaffold gap is present, inconsistency = 5739996 77454664 77455222 433225 432667 NC_000014.9 velvet.56333 100.0 True fake: scaffold gap size wrong estimation (local) 77448223 77450046 439125 437302 NC_000014.9 velvet.56333 99.95 True fake: scaffold gap size wrong estimation (local) 77446418 77447028 441767 441157 NC_000014.9 velvet.56333 99.84 True relocation, scaffold gap is present, inconsistency = 39322951 38115641 38118128 447106 449593 NC_000014.9 velvet.56333 100.0 True fake: not a misassembly (possible transposable element) 91138455 91139414 453773 452820 NC_000014.9 velvet.56333 99.38 True fake: not a misassembly (possible transposable element) 38119069 38122095 454237 457263 NC_000014.9 velvet.56333 99.97 True relocation, scaffold gap is present, inconsistency = 53461271 91583377 91584072 457969 457274 NC_000014.9 velvet.56333 100.0 True local misassembly 91585261 91586540 459259 457980 NC_000014.9 velvet.56333 99.84 True relocation, scaffold gap is present, inconsistency = -593474 92177296 92178722 460698 459272 NC_000014.9 velvet.56333 100.0 True relocation, scaffold gap is present, inconsistency = 39164547 53010070 53012738 463377 460709 NC_000014.9 velvet.56333 100.0 True relocation, scaffold gap is present, inconsistency = 41306467 94319723 94322255 463895 466427 NC_000014.9 velvet.56333 99.92 True relocation, scaffold gap is present, inconsistency = 16890971 77426348 77428530 468831 466649 NC_000014.9 velvet.56333 99.91 True fake: not a misassembly (possible transposable element) 38122526 38128292 470356 476185 NC_000014.9 velvet.56333 99.83 True fake: not a misassembly (possible transposable element) 77424456 77425941 477681 476196 NC_000014.9 velvet.56333 100.0 True fake: scaffold gap size wrong estimation (local) 77420438 77424177 485928 482188 NC_000014.9 velvet.56333 99.92 True fake: scaffold gap size wrong estimation (local) 77416891 77418373 490466 488959 NC_000014.9 velvet.56333 98.97 True fake: scaffold gap size wrong estimation (local) 77413498 77414164 494465 493799 NC_000014.9 velvet.56333 98.5 True fake: scaffold gap size wrong estimation (local) 77410466 77411185 498542 497823 NC_000014.9 velvet.56333 100.0 True fake: scaffold gap size wrong estimation (local) 77405364 77407853 504994 502481 NC_000014.9 velvet.56333 99.96 True fake: scaffold gap size wrong estimation (local) 77403001 77405117 508176 506140 NC_000014.9 velvet.56333 96.16 True relocation, scaffold gap is present, inconsistency = 32945098 44442009 44444104 521975 524070 NC_000014.9 velvet.56333 99.9 True relocation, scaffold gap is present, inconsistency = 24771195 69215310 69216453 525224 524081 NC_000014.9 velvet.56333 99.91 True fake: scaffold gap size wrong estimation (local) 69213871 69214999 529593 528466 NC_000014.9 velvet.56333 99.91 True fake: scaffold gap size wrong estimation (local) 69211281 69212107 532912 532086 NC_000014.9 velvet.56333 98.79 True indel: indel (> 5bp) 69210710 69211280 533567 532997 NC_000014.9 velvet.56333 97.2 True local misassembly 69209812 69210535 534559 533836 NC_000014.9 velvet.56333 98.07 True fake: scaffold gap size wrong estimation (local) 69208484 69209811 535947 534620 NC_000014.9 velvet.56333 99.92 True fake: scaffold gap size wrong estimation (local) 69199722 69200414 541111 540419 NC_000014.9 velvet.56333 99.71 True fake: scaffold gap size wrong estimation (local) 69197783 69198888 544009 542904 NC_000014.9 velvet.56333 100.0 True fake: scaffold gap size wrong estimation (local) 69196834 69197461 546077 545450 NC_000014.9 velvet.56333 99.84 True fake: scaffold gap size wrong estimation (local) 69164743 69165305 574961 574399 NC_000014.9 velvet.56333 99.82 True relocation, scaffold gap is present, inconsistency = 46291234 22870590 22871723 576747 577880 NC_000014.9 velvet.56333 100.0 True relocation, scaffold gap is present, inconsistency = 46270459 69142193 69143547 579245 577891 NC_000014.9 velvet.56333 100.0 True fake: scaffold gap size wrong estimation (local) 69131761 69136214 586119 581667 NC_000014.9 velvet.56333 99.91 True relocation, scaffold gap is present, inconsistency = -10337 69141519 69142087 586698 586130 NC_000014.9 velvet.56333 100.0 True fake: scaffold gap size wrong estimation (local) 69140236 69140843 587316 586709 NC_000014.9 velvet.56333 100.0 True relocation, scaffold gap is present, inconsistency = -7864 69144546 69148089 590928 587327 NC_000014.9 velvet.56333 97.92 True relocation, scaffold gap is present, inconsistency = 46236327 22899671 22900796 598351 599474 NC_000014.9 velvet.56333 99.82 True relocation, scaffold gap is present, inconsistency = 46258096 69158903 69160858 601440 599485 NC_000014.9 velvet.56333 99.85 True fake: scaffold gap size wrong estimation (local) 69150868 69156855 610636 604648 NC_000014.9 velvet.56333 99.97 True fake: scaffold gap size wrong estimation (local) 69148663 69150758 613040 610945 NC_000014.9 velvet.56333 100.0 True fake: scaffold gap size wrong estimation (local) 69112607 69120193 646217 638514 NC_000014.9 velvet.56333 99.97 True fake: scaffold gap size wrong estimation (local) 69109340 69110258 650103 649185 NC_000014.9 velvet.56333 100.0 True fake: scaffold gap size wrong estimation (local) 69107021 69109055 652993 650959 NC_000014.9 velvet.56333 100.0 True relocation, scaffold gap is present, inconsistency = -25145 69128750 69131743 656409 653416 NC_000014.9 velvet.56333 99.93 True fake: scaffold gap size wrong estimation (local) 69124246 69126021 658350 656575 NC_000014.9 velvet.56333 100.0 True relocation, scaffold gap is present, inconsistency = 33680349 35425652 35426449 675798 676595 NC_000014.9 velvet.56333 100.0 True local misassembly 35426725 35427655 676596 677526 NC_000014.9 velvet.56333 98.82 True fake: scaffold gap size wrong estimation (local) 35427895 35429428 678392 679925 NC_000014.9 velvet.56333 99.93 True fake: scaffold gap size wrong estimation (local) 35429697 35431637 680734 682674 NC_000014.9 velvet.56333 99.69 True fake: scaffold gap size wrong estimation (local) 35431905 35434257 684121 686411 NC_000014.9 velvet.56333 97.18 True relocation, scaffold gap is present, inconsistency = 33651914 69086182 69092359 692600 686422 NC_000014.9 velvet.56333 99.95 True CONTIG velvet.56333 692600 misassembled 18661853 18662489 3947 3311 NC_000014.9 velvet.56341 100.0 True fake: scaffold gap size wrong estimation (local) 18660327 18661131 4762 3958 NC_000014.9 velvet.56341 99.88 True fake: scaffold gap size wrong estimation (local) 18659540 18660213 5576 4903 NC_000014.9 velvet.56341 100.0 True fake: scaffold gap size wrong estimation (local) 18658518 18659339 7273 6452 NC_000014.9 velvet.56341 100.0 True fake: scaffold gap size wrong estimation (local) 18656031 18658242 10303 8092 NC_000014.9 velvet.56341 100.0 True CONTIG velvet.56341 10303 correct CONTIG velvet.56371 3757 unaligned 71896454 71897536 1083 1 NC_000014.9 velvet.56394 99.72 True CONTIG velvet.56394 1083 correct 37479830 37480524 1 695 NC_000014.9 velvet.56416 99.86 True fake: scaffold gap size wrong estimation (local) 37480736 37482472 4332 6040 NC_000014.9 velvet.56416 98.26 True fake: scaffold gap size wrong estimation (local) 37483405 37484351 7858 8803 NC_000014.9 velvet.56416 99.79 True CONTIG velvet.56416 12762 correct CONTIG velvet.56430 278 unaligned 24127929 24128543 4015 4629 NC_000014.9 velvet.56438 100.0 True fake: scaffold gap size wrong estimation (local) 24129149 24130114 5250 6246 NC_000014.9 velvet.56438 96.79 True fake: scaffold gap size wrong estimation (local) 24130337 24133481 7211 10355 NC_000014.9 velvet.56438 100.0 True CONTIG velvet.56438 12895 correct CONTIG velvet.56440 216 unaligned 106541648 106543440 5882 4091 NC_000014.9 velvet.56455 99.05 True relocation, scaffold gap is present, inconsistency = -12955 106553751 106554295 6734 6190 NC_000014.9 velvet.56455 99.08 True CONTIG velvet.56455 13765 misassembled CONTIG velvet.56485 275 unaligned CONTIG velvet.56499 201 unaligned CONTIG velvet.56508 214 unaligned CONTIG velvet.56523 346 unaligned 105930176 105931248 1 1073 NC_000014.9 velvet.56555 100.0 True local misassembly 105931635 105932899 1074 2338 NC_000014.9 velvet.56555 99.92 True fake: scaffold gap size wrong estimation (local) 105933075 105934340 3978 5275 NC_000014.9 velvet.56555 100.0 True CONTIG velvet.56555 5275 correct 24723909 24725824 1742 3657 NC_000014.9 velvet.56572 99.79 True fake: scaffold gap size wrong estimation (local) 24725972 24727981 4421 6430 NC_000014.9 velvet.56572 99.8 True fake: scaffold gap size wrong estimation (local) 24732462 24734135 6803 8535 NC_000014.9 velvet.56572 96.2 True local misassembly 24729367 24729899 10343 10878 NC_000014.9 velvet.56572 99.07 True fake: scaffold gap size wrong estimation (local) 24756927 24762272 38320 44407 NC_000014.9 velvet.56572 99.43 True fake: scaffold gap size wrong estimation (local) 24767632 24768805 45781 46955 NC_000014.9 velvet.56572 99.15 True local misassembly 24765209 24767612 49607 52010 NC_000014.9 velvet.56572 99.79 True CONTIG velvet.56572 55050 correct 55150049 55150838 1773 984 NC_000014.9 velvet.56611 99.87 True fake: scaffold gap size wrong estimation (local) 55146221 55149759 6070 2439 NC_000014.9 velvet.56611 99.97 True fake: scaffold gap size wrong estimation (local) 55144834 55146025 8304 7122 NC_000014.9 velvet.56611 99.24 True fake: scaffold gap size wrong estimation (local) 55136607 55143408 17311 10512 NC_000014.9 velvet.56611 99.88 True fake: scaffold gap size wrong estimation (local) 55110834 55111571 43030 42293 NC_000014.9 velvet.56611 100.0 True relocation, scaffold gap is present, inconsistency = -13707 55123590 55124530 44349 43041 NC_000014.9 velvet.56611 98.65 True fake: scaffold gap size wrong estimation (local) 55121822 55123511 46049 44360 NC_000014.9 velvet.56611 100.0 True fake: scaffold gap size wrong estimation (local) 55117574 55121540 51037 47072 NC_000014.9 velvet.56611 99.87 True fake: scaffold gap size wrong estimation (local) 55115941 55117267 53310 51984 NC_000014.9 velvet.56611 99.85 True fake: scaffold gap size wrong estimation (local) 55114228 55115093 57393 56528 NC_000014.9 velvet.56611 100.0 True fake: scaffold gap size wrong estimation (local) 55088244 55088840 76690 76094 NC_000014.9 velvet.56611 99.66 True fake: scaffold gap size wrong estimation (local) 55087389 55087971 77352 76780 NC_000014.9 velvet.56611 98.25 True fake: scaffold gap size wrong estimation (local) 55083948 55085919 81856 79956 NC_000014.9 velvet.56611 96.38 True fake: scaffold gap size wrong estimation (local) 55081156 55083380 85648 83487 NC_000014.9 velvet.56611 97.05 True CONTIG velvet.56611 89485 misassembled 31219260 31219938 3720 4398 NC_000014.9 velvet.56625 100.0 True fake: scaffold gap size wrong estimation (local) 31224474 31225206 10266 10998 NC_000014.9 velvet.56625 99.86 True CONTIG velvet.56625 10998 correct CONTIG velvet.56667 298 unaligned 73804480 73805835 1241 2594 NC_000014.9 velvet.56705 99.78 True fake: not a misassembly (possible transposable element) 92217653 92218666 4318 5325 NC_000014.9 velvet.56705 99.0 True fake: not a misassembly (possible transposable element) 73807581 73808154 5336 5909 NC_000014.9 velvet.56705 100.0 True CONTIG velvet.56705 7188 correct CONTIG velvet.56709 268 unaligned 36249892 36252325 2676 5166 NC_000014.9 velvet.56718 99.96 True fake: scaffold gap size wrong estimation (local) 36253597 36255587 7173 9143 NC_000014.9 velvet.56718 98.99 True fake: scaffold gap size wrong estimation (local) 36255611 36256404 10699 11492 NC_000014.9 velvet.56718 100.0 True CONTIG velvet.56718 11492 correct CONTIG velvet.56765 218 unaligned 53034107 53037528 4492 1101 NC_000014.9 velvet.56771 99.0 True fake: scaffold gap size wrong estimation (local) 53030438 53033583 8955 5810 NC_000014.9 velvet.56771 100.0 True fake: scaffold gap size wrong estimation (local) 53026804 53028123 13011 11692 NC_000014.9 velvet.56771 99.85 True fake: scaffold gap size wrong estimation (local) 53022444 53024682 17938 15704 NC_000014.9 velvet.56771 99.78 True fake: scaffold gap size wrong estimation (extensive) 52982280 52983295 50150 49132 NC_000014.9 velvet.56771 99.51 True relocation, scaffold gap is present, inconsistency = -28527 53008738 53009848 52219 51109 NC_000014.9 velvet.56771 99.82 True fake: scaffold gap size wrong estimation (local) 53007906 53008449 53676 53133 NC_000014.9 velvet.56771 100.0 True fake: not a misassembly (possible transposable element) 21591801 21592682 54804 53923 NC_000014.9 velvet.56771 100.0 True fake: not a misassembly (possible transposable element) 53005017 53007742 57540 54815 NC_000014.9 velvet.56771 99.89 True fake: not a misassembly (possible transposable element) 52932049 52933456 77942 79349 NC_000014.9 velvet.56771 99.93 True fake: not a misassembly (possible transposable element) 52971674 52977344 85336 79516 NC_000014.9 velvet.56771 99.34 True fake: scaffold gap size wrong estimation (local) 52968226 52969218 90464 89474 NC_000014.9 velvet.56771 99.59 True fake: scaffold gap size wrong estimation (extensive) 52957784 52958931 93162 92015 NC_000014.9 velvet.56771 100.0 True relocation, scaffold gap is present, inconsistency = -11176 52964538 52965797 97584 96325 NC_000014.9 velvet.56771 99.84 True local misassembly 52969232 52970019 98382 97595 NC_000014.9 velvet.56771 99.75 True relocation, scaffold gap is present, inconsistency = 12736 52954586 52956485 98393 100292 NC_000014.9 velvet.56771 99.95 True local misassembly 52951349 52954563 100303 103605 NC_000014.9 velvet.56771 97.06 True fake: scaffold gap size wrong estimation (local) 52959298 52961509 103616 105876 NC_000014.9 velvet.56771 99.95 True fake: scaffold gap size wrong estimation (local) 52961742 52964387 106750 109566 NC_000014.9 velvet.56771 99.81 True inversion, scaffold gap is present 52956899 52957558 113074 112415 NC_000014.9 velvet.56771 99.7 True fake: scaffold gap size wrong estimation (local) 52925914 52931748 145966 140056 NC_000014.9 velvet.56771 99.28 True fake: scaffold gap size wrong estimation (local) 52920512 52925269 153282 147688 NC_000014.9 velvet.56771 99.62 True fake: scaffold gap size wrong estimation (local) 52901274 52902110 171302 170466 NC_000014.9 velvet.56771 99.64 True fake: scaffold gap size wrong estimation (local) 52899553 52900975 173399 171968 NC_000014.9 velvet.56771 99.16 True fake: scaffold gap size wrong estimation (local) 52897977 52899279 175375 174071 NC_000014.9 velvet.56771 99.69 True fake: scaffold gap size wrong estimation (local) 52897025 52897704 176635 175956 NC_000014.9 velvet.56771 99.85 True fake: scaffold gap size wrong estimation (local) 52890849 52892150 177947 176646 NC_000014.9 velvet.56771 100.0 True local misassembly 52894100 52894869 180184 179415 NC_000014.9 velvet.56771 100.0 True relocation, scaffold gap is present, inconsistency = 94279 52989244 52990294 180280 181317 NC_000014.9 velvet.56771 98.46 True fake: scaffold gap size wrong estimation (local) 52990419 52999998 182394 191975 NC_000014.9 velvet.56771 97.32 True CONTIG velvet.56771 191975 misassembled CONTIG velvet.56792 224 unaligned 97195279 97196471 96 1254 NC_000014.9 velvet.56806 96.88 True CONTIG velvet.56806 1254 correct 54684625 54686571 1945 1 NC_000014.9 velvet.56826 99.79 True relocation, scaffold gap is present, inconsistency = -50585 54727459 54735192 9952 1963 NC_000014.9 velvet.56826 99.87 True fake: scaffold gap size wrong estimation (local) 54719004 54727154 19116 10966 NC_000014.9 velvet.56826 99.88 True fake: scaffold gap size wrong estimation (local) 54717445 54718735 21547 20198 NC_000014.9 velvet.56826 100.0 True fake: not a misassembly (possible transposable element) 54703871 54706230 24116 21760 NC_000014.9 velvet.56826 99.45 True fake: not a misassembly (possible transposable element) 54707320 54717228 34033 24127 NC_000014.9 velvet.56826 99.9 True fake: scaffold gap size wrong estimation (local) 54701264 54703619 36399 34044 NC_000014.9 velvet.56826 99.92 True fake: scaffold gap size wrong estimation (extensive) 54689208 54691540 55727 53395 NC_000014.9 velvet.56826 99.7 True fake: scaffold gap size wrong estimation (local) 54678822 54684598 61513 55738 NC_000014.9 velvet.56826 99.88 True fake: scaffold gap size wrong estimation (extensive) 54662661 54669437 68289 61524 NC_000014.9 velvet.56826 99.76 True relocation, scaffold gap is present, inconsistency = -12099 54669574 54674749 73440 68300 NC_000014.9 velvet.56826 99.21 True relocation, scaffold gap is present, inconsistency = -8864 54676639 54678427 75239 73451 NC_000014.9 velvet.56826 99.44 True local misassembly 54675368 54676355 76227 75240 NC_000014.9 velvet.56826 100.0 True fake: not a misassembly (possible transposable element) 54653582 54655446 87602 85738 NC_000014.9 velvet.56826 99.95 True fake: not a misassembly (possible transposable element) 54660087 54662363 89889 87613 NC_000014.9 velvet.56826 99.96 True fake: scaffold gap size wrong estimation (local) 54658242 54659930 92331 90643 NC_000014.9 velvet.56826 99.7 True fake: scaffold gap size wrong estimation (local) 54655702 54656639 95328 94391 NC_000014.9 velvet.56826 99.89 True fake: scaffold gap size wrong estimation (extensive) 54624236 54626011 119494 117719 NC_000014.9 velvet.56826 100.0 True relocation, scaffold gap is present, inconsistency = -41760358 96383395 96384583 120693 119505 NC_000014.9 velvet.56826 99.75 True fake: scaffold gap size wrong estimation (local) 96379284 96383147 125683 121396 NC_000014.9 velvet.56826 99.92 True fake: scaffold gap size wrong estimation (local) 96375698 96379037 130348 126531 NC_000014.9 velvet.56826 99.94 True fake: scaffold gap size wrong estimation (local) 96373602 96375419 132912 131095 NC_000014.9 velvet.56826 100.0 True relocation, scaffold gap is present, inconsistency = 66041124 30326489 30331866 138901 133524 NC_000014.9 velvet.56826 100.0 True relocation, scaffold gap is present, inconsistency = -24326820 54642069 54653298 150141 138912 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 54637366 54641794 156108 151003 NC_000014.9 velvet.56826 99.86 True fake: scaffold gap size wrong estimation (local) 54635734 54637091 158614 157257 NC_000014.9 velvet.56826 100.0 True relocation, scaffold gap is present, inconsistency = 10956 54621641 54623476 161751 159916 NC_000014.9 velvet.56826 99.89 True fake: scaffold gap size wrong estimation (local) 54613138 54621381 171066 162823 NC_000014.9 velvet.56826 99.72 True relocation, scaffold gap is present, inconsistency = -22470 54634251 54635163 172415 171511 NC_000014.9 velvet.56826 98.69 True fake: scaffold gap size wrong estimation (local) 54630934 54634013 176000 172921 NC_000014.9 velvet.56826 100.0 True fake: not a misassembly (possible transposable element) 54611892 54612834 177277 176335 NC_000014.9 velvet.56826 99.79 True fake: not a misassembly (possible transposable element) 54627708 54630458 179998 177288 NC_000014.9 velvet.56826 98.5 True relocation, scaffold gap is present, inconsistency = 16105 54608012 54611592 183589 180009 NC_000014.9 velvet.56826 99.89 True fake: scaffold gap size wrong estimation (local) 54604093 54607421 188392 184979 NC_000014.9 velvet.56826 97.33 True fake: scaffold gap size wrong estimation (local) 54602798 54603853 190242 189187 NC_000014.9 velvet.56826 100.0 True relocation, scaffold gap is present, inconsistency = 12025821 42568616 42576952 198519 190267 NC_000014.9 velvet.56826 98.91 True relocation, scaffold gap is present, inconsistency = 36605438 79182401 79185494 198530 201623 NC_000014.9 velvet.56826 99.97 True fake: scaffold gap size wrong estimation (local) 79185757 79188407 202634 205185 NC_000014.9 velvet.56826 96.15 True relocation, scaffold gap is present, inconsistency = 26515452 52668491 52670054 206999 205436 NC_000014.9 velvet.56826 99.23 True local misassembly 52667685 52668261 207576 207000 NC_000014.9 velvet.56826 100.0 True relocation, scaffold gap is present, inconsistency = 22372410 30283571 30295264 219421 207587 NC_000014.9 velvet.56826 99.99 True fake: scaffold gap size wrong estimation (local) 30282347 30283254 221484 220577 NC_000014.9 velvet.56826 100.0 True relocation, scaffold gap is present, inconsistency = 48895835 79200865 79202086 243260 244481 NC_000014.9 velvet.56826 99.92 True relocation, scaffold gap is present, inconsistency = 24049 79227122 79233692 245468 252830 NC_000014.9 velvet.56826 98.56 True relocation, scaffold gap is present, inconsistency = 24624794 54599086 54602317 256072 252841 NC_000014.9 velvet.56826 99.97 True fake: not a misassembly (possible transposable element) 54576020 54578431 259584 257173 NC_000014.9 velvet.56826 99.88 True fake: not a misassembly (possible transposable element) 54596538 54597259 260309 259595 NC_000014.9 velvet.56826 99.02 True fake: scaffold gap size wrong estimation (extensive) 54568106 54575983 282095 273257 NC_000014.9 velvet.56826 99.92 True fake: scaffold gap size wrong estimation (local) 54561624 54566118 289396 284902 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 54560141 54560669 291706 291178 NC_000014.9 velvet.56826 100.0 True fake: not a misassembly (possible transposable element) 31298586 31299465 292856 293735 NC_000014.9 velvet.56826 99.89 True fake: not a misassembly (possible transposable element) 54554091 54554917 297723 296897 NC_000014.9 velvet.56826 100.0 True fake: not a misassembly (possible transposable element) 31302138 31302906 297734 298502 NC_000014.9 velvet.56826 100.0 True fake: not a misassembly (possible transposable element) 54549198 54552903 303944 300239 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 54547271 54548633 306426 305064 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 54544372 54546991 310028 307359 NC_000014.9 velvet.56826 99.96 True fake: scaffold gap size wrong estimation (local) 54534385 54544119 320649 310914 NC_000014.9 velvet.56826 99.82 True fake: scaffold gap size wrong estimation (local) 54532688 54534131 323094 321651 NC_000014.9 velvet.56826 98.96 True fake: scaffold gap size wrong estimation (local) 54530735 54532687 325106 323154 NC_000014.9 velvet.56826 100.0 True local misassembly 54528273 54530197 327031 325107 NC_000014.9 velvet.56826 99.95 True fake: scaffold gap size wrong estimation (local) 54520394 54521177 328646 327863 NC_000014.9 velvet.56826 98.72 True local misassembly 54519500 54520095 329242 328647 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 54515288 54518026 334718 331980 NC_000014.9 velvet.56826 99.89 True relocation, scaffold gap is present, inconsistency = 9762893 44748686 44752201 338426 334912 NC_000014.9 velvet.56826 99.91 True fake: scaffold gap size wrong estimation (local) 44744232 44747267 343772 340737 NC_000014.9 velvet.56826 99.87 True fake: scaffold gap size wrong estimation (local) 44715232 44721470 371675 365437 NC_000014.9 velvet.56826 99.94 True fake: scaffold gap size wrong estimation (local) 44713455 44714961 374281 372775 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 44711395 44713177 376877 375095 NC_000014.9 velvet.56826 99.89 True relocation, scaffold gap is present, inconsistency = -37681 44747415 44748565 378512 377388 NC_000014.9 velvet.56826 96.67 True relocation, scaffold gap is present, inconsistency = -9775594 54521779 54522998 379742 378523 NC_000014.9 velvet.56826 100.0 True relocation, scaffold gap is present, inconsistency = 8632182 63155191 63157901 379753 382444 NC_000014.9 velvet.56826 99.04 True fake: scaffold gap size wrong estimation (local) 63163212 63164815 382455 384058 NC_000014.9 velvet.56826 99.88 True local misassembly 63158066 63160286 384069 386289 NC_000014.9 velvet.56826 98.96 True fake: scaffold gap size wrong estimation (local) 63160287 63162363 388204 390280 NC_000014.9 velvet.56826 99.52 True relocation, scaffold gap is present, inconsistency = 8645199 54507588 54515077 397880 390291 NC_000014.9 velvet.56826 98.88 True fake: scaffold gap size wrong estimation (local) 54506680 54507334 398951 398297 NC_000014.9 velvet.56826 97.4 True local misassembly 54505073 54506408 400287 398952 NC_000014.9 velvet.56826 99.93 True fake: scaffold gap size wrong estimation (local) 54487670 54489112 416295 414853 NC_000014.9 velvet.56826 99.93 True fake: scaffold gap size wrong estimation (local) 54486238 54487147 418033 417124 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 54473616 54485967 431220 418871 NC_000014.9 velvet.56826 99.98 True relocation, scaffold gap is present, inconsistency = -12240176 66712747 66713781 432293 431231 NC_000014.9 velvet.56826 97.18 True fake: scaffold gap size wrong estimation (local) 66683977 66684764 457691 456904 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 66682730 66683300 459964 459406 NC_000014.9 velvet.56826 97.86 True fake: scaffold gap size wrong estimation (local) 66675403 66682466 468301 460348 NC_000014.9 velvet.56826 99.97 True fake: scaffold gap size wrong estimation (local) 66674356 66675131 469453 468678 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 66673332 66674091 470387 469628 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 66670552 66673087 474108 471613 NC_000014.9 velvet.56826 98.41 True fake: scaffold gap size wrong estimation (local) 66669367 66670533 476154 474988 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 66668276 66668859 476952 476369 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 66647176 66649045 498876 497007 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 66645698 66646916 500835 499617 NC_000014.9 velvet.56826 99.18 True local misassembly 66640366 66641636 502106 500836 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 66638370 66640136 504930 502563 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 66635948 66638221 507428 505155 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 66632697 66635852 511472 508256 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 66631319 66632484 513381 512216 NC_000014.9 velvet.56826 100.0 True relocation, scaffold gap is present, inconsistency = 6130844 60497807 60499083 514773 516048 NC_000014.9 velvet.56826 99.84 True fake: scaffold gap size wrong estimation (local) 60499287 60500067 516433 517213 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 60500326 60517544 518112 535504 NC_000014.9 velvet.56826 99.74 True fake: scaffold gap size wrong estimation (local) 60517805 60523314 536549 542923 NC_000014.9 velvet.56826 99.84 True fake: not a misassembly (possible transposable element) 25969543 25972832 545909 549198 NC_000014.9 velvet.56826 99.97 True fake: not a misassembly (possible transposable element) 60529423 60531552 549761 551890 NC_000014.9 velvet.56826 99.86 True local misassembly 60531616 60534986 552236 555606 NC_000014.9 velvet.56826 99.76 True fake: scaffold gap size wrong estimation (local) 60535123 60537078 556411 558422 NC_000014.9 velvet.56826 99.9 True fake: scaffold gap size wrong estimation (local) 60537320 60538017 559199 559896 NC_000014.9 velvet.56826 99.86 True fake: scaffold gap size wrong estimation (local) 60538468 60539373 560499 561404 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 60541094 60542676 563815 565396 NC_000014.9 velvet.56826 99.68 True fake: scaffold gap size wrong estimation (local) 60542953 60545249 566416 568709 NC_000014.9 velvet.56826 99.7 True fake: not a misassembly (possible transposable element) 54376893 54378199 570026 568720 NC_000014.9 velvet.56826 100.0 True fake: not a misassembly (possible transposable element) 60545458 60546724 570037 571303 NC_000014.9 velvet.56826 99.76 True relocation, scaffold gap is present, inconsistency = 6168469 54375436 54376649 572856 571643 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 54373960 54375168 574582 573374 NC_000014.9 velvet.56826 100.0 True relocation, scaffold gap is present, inconsistency = -6174946 60546719 60547856 576769 575632 NC_000014.9 velvet.56826 100.0 True inversion, scaffold gap is present 60547899 60548879 579173 580199 NC_000014.9 velvet.56826 99.28 True fake: scaffold gap size wrong estimation (local) 60549669 60554801 581739 586871 NC_000014.9 velvet.56826 99.88 True fake: scaffold gap size wrong estimation (local) 60555110 60564974 587908 598171 NC_000014.9 velvet.56826 99.41 True relocation, scaffold gap is present, inconsistency = 6063972 66629212 66630586 599811 598437 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 66623350 66629021 606947 600652 NC_000014.9 velvet.56826 97.23 True fake: scaffold gap size wrong estimation (local) 66621783 66622800 608852 607834 NC_000014.9 velvet.56826 99.21 True fake: scaffold gap size wrong estimation (local) 66619478 66620314 611756 610920 NC_000014.9 velvet.56826 98.81 True indel: indel (> 5bp) 66618277 66619470 612950 611757 NC_000014.9 velvet.56826 95.23 True fake: scaffold gap size wrong estimation (local) 66616958 66618276 615562 614244 NC_000014.9 velvet.56826 99.17 True local misassembly 66616159 66616743 616147 615563 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 66606039 66614786 627155 618476 NC_000014.9 velvet.56826 98.12 True fake: scaffold gap size wrong estimation (local) 66598840 66605037 634379 628127 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 66593418 66598563 640518 635383 NC_000014.9 velvet.56826 99.77 True fake: scaffold gap size wrong estimation (local) 66573728 66582376 661623 652820 NC_000014.9 velvet.56826 99.99 True fake: scaffold gap size wrong estimation (local) 66572475 66573450 663670 662695 NC_000014.9 velvet.56826 99.18 True fake: scaffold gap size wrong estimation (local) 66571702 66572474 664538 663766 NC_000014.9 velvet.56826 98.71 True relocation, scaffold gap is present, inconsistency = 12547 66553846 66558731 669861 664962 NC_000014.9 velvet.56826 98.94 True fake: scaffold gap size wrong estimation (local) 66551130 66552964 673224 671390 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 66548452 66550856 677084 674680 NC_000014.9 velvet.56826 99.79 True fake: scaffold gap size wrong estimation (local) 66546832 66548127 679637 678342 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 66521041 66524493 700892 697354 NC_000014.9 velvet.56826 97.37 True fake: scaffold gap size wrong estimation (local) 66517900 66520948 704643 701595 NC_000014.9 velvet.56826 99.97 True fake: scaffold gap size wrong estimation (local) 66517132 66517727 705662 705067 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 66516289 66516850 706340 705779 NC_000014.9 velvet.56826 100.0 True relocation, scaffold gap is present, inconsistency = -28282 66541066 66544560 710331 706351 NC_000014.9 velvet.56826 99.88 True fake: scaffold gap size wrong estimation (local) 66539697 66540807 711857 710747 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 66538107 66539397 713837 712547 NC_000014.9 velvet.56826 99.92 True fake: scaffold gap size wrong estimation (local) 66531076 66538013 722488 714330 NC_000014.9 velvet.56826 99.97 True fake: scaffold gap size wrong estimation (local) 66529943 66530787 723889 723045 NC_000014.9 velvet.56826 98.58 True fake: scaffold gap size wrong estimation (local) 66498053 66500564 755649 753138 NC_000014.9 velvet.56826 100.0 True fake: not a misassembly (possible transposable element) 100002687 100003188 781602 782103 NC_000014.9 velvet.56826 100.0 True fake: not a misassembly (possible transposable element) 66468818 66469713 783424 782523 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 66467060 66468297 785124 783887 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 66463847 66466993 788763 785753 NC_000014.9 velvet.56826 95.38 True fake: scaffold gap size wrong estimation (local) 66462975 66463557 790490 789908 NC_000014.9 velvet.56826 100.0 True fake: scaffold gap size wrong estimation (local) 66461463 66462669 791888 790682 NC_000014.9 velvet.56826 100.0 True CONTIG velvet.56826 792041 misassembled CONTIG velvet.56861 377 unaligned 91568181 91570864 2008 4679 NC_000014.9 velvet.56886 99.44 True CONTIG velvet.56886 7339 correct CONTIG velvet.56896 1529 unaligned CONTIG velvet.56970 3765 unaligned 39388622 39391655 3182 100 NC_000014.9 velvet.56986 99.6 True fake: scaffold gap size wrong estimation (local) 39382956 39388530 8827 3363 NC_000014.9 velvet.56986 97.95 True fake: scaffold gap size wrong estimation (local) 39381867 39382947 10662 9582 NC_000014.9 velvet.56986 99.81 True fake: scaffold gap size wrong estimation (local) 39381015 39381648 11947 11314 NC_000014.9 velvet.56986 98.42 True fake: scaffold gap size wrong estimation (local) 39379826 39380418 12870 12278 NC_000014.9 velvet.56986 100.0 True relocation, scaffold gap is present, inconsistency = 7574 39364356 39365130 19992 20766 NC_000014.9 velvet.56986 99.87 True fake: scaffold gap size wrong estimation (local) 39365332 39373568 21488 30609 NC_000014.9 velvet.56986 99.77 True inversion, scaffold gap is present 39363492 39364074 33739 33157 NC_000014.9 velvet.56986 98.28 True local misassembly 39361986 39363246 35000 33740 NC_000014.9 velvet.56986 100.0 True fake: scaffold gap size wrong estimation (local) 39360253 39361421 37922 36754 NC_000014.9 velvet.56986 100.0 True fake: scaffold gap size wrong estimation (local) 39325977 39327635 71282 69625 NC_000014.9 velvet.56986 99.82 True inversion, scaffold gap is present 39332182 39334226 71293 73289 NC_000014.9 velvet.56986 97.42 True fake: scaffold gap size wrong estimation (local) 39334871 39337747 74394 77573 NC_000014.9 velvet.56986 98.81 True fake: scaffold gap size wrong estimation (local) 39338026 39339879 78403 80256 NC_000014.9 velvet.56986 99.95 True relocation, scaffold gap is present, inconsistency = 17487389 56827279 56827964 80267 80952 NC_000014.9 velvet.56986 100.0 True local misassembly 56826016 56827268 82423 83663 NC_000014.9 velvet.56986 98.96 True fake: scaffold gap size wrong estimation (local) 56828642 56830302 85885 87545 NC_000014.9 velvet.56986 100.0 True fake: scaffold gap size wrong estimation (local) 56830598 56833098 88632 91132 NC_000014.9 velvet.56986 99.92 True fake: scaffold gap size wrong estimation (local) 56837698 56838556 91143 92001 NC_000014.9 velvet.56986 99.65 True fake: scaffold gap size wrong estimation (local) 56838836 56839682 92434 93280 NC_000014.9 velvet.56986 99.88 True fake: scaffold gap size wrong estimation (local) 56839990 56841460 94262 95732 NC_000014.9 velvet.56986 99.93 True fake: scaffold gap size wrong estimation (local) 56841585 56843016 95743 98095 NC_000014.9 velvet.56986 99.85 True fake: scaffold gap size wrong estimation (local) 56843299 56845134 98363 100108 NC_000014.9 velvet.56986 95.02 True fake: scaffold gap size wrong estimation (local) 56845401 56848274 101225 104098 NC_000014.9 velvet.56986 99.97 True fake: scaffold gap size wrong estimation (extensive) 56871450 56872267 119665 120482 NC_000014.9 velvet.56986 99.88 True indel: indel (> 5bp) 56872347 56872881 120483 121017 NC_000014.9 velvet.56986 98.13 True fake: not a misassembly (possible transposable element) 102171286 102171918 125406 126038 NC_000014.9 velvet.56986 99.84 True fake: not a misassembly (possible transposable element) 56878129 56879257 131181 132309 NC_000014.9 velvet.56986 100.0 True relocation, scaffold gap is present, inconsistency = 16068 56916881 56917491 154473 153865 NC_000014.9 velvet.56986 99.67 True inversion, scaffold gap is present 56908594 56910056 154484 155975 NC_000014.9 velvet.56986 97.86 True fake: scaffold gap size wrong estimation (local) 56910337 56912561 157138 159362 NC_000014.9 velvet.56986 100.0 True fake: scaffold gap size wrong estimation (local) 56912842 56916092 160275 163809 NC_000014.9 velvet.56986 99.85 True fake: scaffold gap size wrong estimation (local) 56916391 56916905 164485 164999 NC_000014.9 velvet.56986 100.0 True relocation, scaffold gap is present, inconsistency = 14563114 71480764 71489591 174886 165744 NC_000014.9 velvet.56986 99.91 True relocation, scaffold gap is present, inconsistency = 14571478 56907253 56908459 176919 175713 NC_000014.9 velvet.56986 100.0 True relocation, scaffold gap is present, inconsistency = -35122510 92025880 92029275 181604 177407 NC_000014.9 velvet.56986 99.97 True relocation, scaffold gap is present, inconsistency = 35103857 56918003 56922012 181615 185623 NC_000014.9 velvet.56986 99.95 True fake: scaffold gap size wrong estimation (local) 56922414 56924434 186731 188751 NC_000014.9 velvet.56986 99.9 True fake: scaffold gap size wrong estimation (local) 56924705 56926874 189827 191996 NC_000014.9 velvet.56986 99.95 True fake: not a misassembly (possible transposable element) 73338108 73340821 193093 195806 NC_000014.9 velvet.56986 99.89 True fake: not a misassembly (possible transposable element) 56927153 56928038 195817 196702 NC_000014.9 velvet.56986 99.89 True relocation, scaffold gap is present, inconsistency = 16399943 73341168 73342174 209889 210895 NC_000014.9 velvet.56986 98.91 True local misassembly 73342175 73343058 211712 212595 NC_000014.9 velvet.56986 99.35 True fake: not a misassembly (possible transposable element) 56930498 56932213 212596 214311 NC_000014.9 velvet.56986 100.0 True fake: not a misassembly (possible transposable element) 73343106 73343767 214312 214973 NC_000014.9 velvet.56986 98.34 True indel: indel (> 5bp) 73343778 73344980 214993 216195 NC_000014.9 velvet.56986 99.92 True relocation, scaffold gap is present, inconsistency = -16412618 56932722 56934097 216555 217907 NC_000014.9 velvet.56986 98.24 True fake: not a misassembly (possible transposable element) 73346482 73349167 223164 220488 NC_000014.9 velvet.56986 99.63 True fake: not a misassembly (possible transposable element) 56935572 56936685 223358 224471 NC_000014.9 velvet.56986 100.0 True fake: scaffold gap size wrong estimation (local) 56937016 56937858 224642 225484 NC_000014.9 velvet.56986 100.0 True fake: scaffold gap size wrong estimation (local) 56938467 56939174 227156 227863 NC_000014.9 velvet.56986 99.72 True fake: scaffold gap size wrong estimation (local) 56939175 56941154 227929 229908 NC_000014.9 velvet.56986 98.84 True fake: scaffold gap size wrong estimation (local) 56943100 56946731 232594 236225 NC_000014.9 velvet.56986 99.86 True relocation, scaffold gap is present, inconsistency = 104322 57051064 57052134 237306 236236 NC_000014.9 velvet.56986 99.91 True fake: scaffold gap size wrong estimation (local) 57044893 57050519 244927 238417 NC_000014.9 velvet.56986 99.82 True fake: scaffold gap size wrong estimation (local) 57040389 57044095 250243 246545 NC_000014.9 velvet.56986 99.68 True relocation, scaffold gap is present, inconsistency = -15254 57052653 57055615 253233 250271 NC_000014.9 velvet.56986 99.87 True fake: scaffold gap size wrong estimation (local) 57021173 57024287 281922 278755 NC_000014.9 velvet.56986 99.31 True relocation, scaffold gap is present, inconsistency = 34880856 91909223 91911001 286002 287780 NC_000014.9 velvet.56986 99.78 True relocation, scaffold gap is present, inconsistency = 34876330 57031565 57032882 289116 287791 NC_000014.9 velvet.56986 99.77 True fake: scaffold gap size wrong estimation (local) 57028452 57031446 293087 290031 NC_000014.9 velvet.56986 97.23 True relocation, scaffold gap is present, inconsistency = 17635529 39392290 39392912 293098 293720 NC_000014.9 velvet.56986 100.0 True fake: scaffold gap size wrong estimation (local) 39393146 39395016 294176 296046 NC_000014.9 velvet.56986 99.84 True fake: scaffold gap size wrong estimation (local) 39395247 39403513 296972 306329 NC_000014.9 velvet.56986 99.46 True fake: not a misassembly (possible transposable element) 39412048 39414678 310925 308295 NC_000014.9 velvet.56986 99.96 True fake: not a misassembly (possible transposable element) 39414833 39415700 310936 311803 NC_000014.9 velvet.56986 99.88 True fake: scaffold gap size wrong estimation (local) 39415956 39417548 313059 314651 NC_000014.9 velvet.56986 99.94 True fake: scaffold gap size wrong estimation (local) 39418822 39420448 316672 318298 NC_000014.9 velvet.56986 99.94 True fake: scaffold gap size wrong estimation (local) 39420701 39422009 319115 320404 NC_000014.9 velvet.56986 98.54 True fake: scaffold gap size wrong estimation (local) 39422258 39422868 320811 321421 NC_000014.9 velvet.56986 99.84 True fake: scaffold gap size wrong estimation (local) 39423136 39424819 322309 323986 NC_000014.9 velvet.56986 99.47 True fake: scaffold gap size wrong estimation (local) 39425063 39428331 324997 328253 NC_000014.9 velvet.56986 99.44 True fake: scaffold gap size wrong estimation (local) 39428461 39432020 329116 332675 NC_000014.9 velvet.56986 99.92 True local misassembly 39432608 39433477 332676 333545 NC_000014.9 velvet.56986 98.51 True fake: scaffold gap size wrong estimation (local) 39433478 39437490 333600 337612 NC_000014.9 velvet.56986 99.5 True fake: scaffold gap size wrong estimation (local) 39437648 39439328 338468 340148 NC_000014.9 velvet.56986 96.37 True fake: scaffold gap size wrong estimation (local) 39439988 39443100 341395 344512 NC_000014.9 velvet.56986 99.71 True fake: scaffold gap size wrong estimation (local) 39443383 39444093 345440 346150 NC_000014.9 velvet.56986 100.0 True fake: scaffold gap size wrong estimation (local) 39444370 39445068 346443 347141 NC_000014.9 velvet.56986 99.86 True fake: scaffold gap size wrong estimation (local) 39445172 39453160 347831 355928 NC_000014.9 velvet.56986 98.15 True fake: scaffold gap size wrong estimation (local) 39454071 39461468 357255 365439 NC_000014.9 velvet.56986 99.93 True fake: scaffold gap size wrong estimation (local) 39461964 39464180 366782 369002 NC_000014.9 velvet.56986 99.68 True fake: scaffold gap size wrong estimation (local) 39464750 39466766 370284 372293 NC_000014.9 velvet.56986 99.55 True relocation, scaffold gap is present, inconsistency = 170566 39289480 39294173 376997 372304 NC_000014.9 velvet.56986 99.85 True fake: scaffold gap size wrong estimation (local) 39255847 39257073 412999 411800 NC_000014.9 velvet.56986 97.7 True relocation, scaffold gap is present, inconsistency = -296160 39549414 39550204 415592 414802 NC_000014.9 velvet.56986 100.0 True fake: scaffold gap size wrong estimation (local) 39546019 39549124 419708 416603 NC_000014.9 velvet.56986 99.84 True fake: scaffold gap size wrong estimation (local) 39542212 39545757 424375 420693 NC_000014.9 velvet.56986 99.68 True fake: scaffold gap size wrong estimation (local) 39539620 39542078 427266 424812 NC_000014.9 velvet.56986 99.43 True fake: scaffold gap size wrong estimation (local) 39532464 39536293 432949 429120 NC_000014.9 velvet.56986 99.95 True relocation, scaffold gap is present, inconsistency = 7062 39500584 39501366 456985 457767 NC_000014.9 velvet.56986 99.49 True fake: scaffold gap size wrong estimation (local) 39503441 39506472 460516 463547 NC_000014.9 velvet.56986 99.9 True inversion, scaffold gap is present 39498062 39500516 466008 463558 NC_000014.9 velvet.56986 99.67 True fake: scaffold gap size wrong estimation (local) 39496574 39497484 468470 467567 NC_000014.9 velvet.56986 97.34 True relocation, scaffold gap is present, inconsistency = -13279 39508843 39509434 469480 468889 NC_000014.9 velvet.56986 98.14 True fake: scaffold gap size wrong estimation (local) 39506997 39508406 471146 469737 NC_000014.9 velvet.56986 99.93 True fake: scaffold gap size wrong estimation (local) 39486490 39495130 487026 478388 NC_000014.9 velvet.56986 99.92 True fake: scaffold gap size wrong estimation (local) 39483552 39486203 490705 488054 NC_000014.9 velvet.56986 99.92 True fake: scaffold gap size wrong estimation (local) 39479428 39481210 495309 493539 NC_000014.9 velvet.56986 99.27 True fake: scaffold gap size wrong estimation (local) 39473547 39476068 502587 500066 NC_000014.9 velvet.56986 99.8 True fake: scaffold gap size wrong estimation (local) 39466751 39472583 509634 502903 NC_000014.9 velvet.56986 99.91 True relocation, scaffold gap is present, inconsistency = 60518 39536332 39539642 512865 516175 NC_000014.9 velvet.56986 99.94 True relocation, scaffold gap is present, inconsistency = 19729255 19803094 19807066 520164 516186 NC_000014.9 velvet.56986 99.85 True fake: scaffold gap size wrong estimation (local) 19797840 19802671 526185 521263 NC_000014.9 velvet.56986 97.85 True fake: scaffold gap size wrong estimation (local) 19787519 19797758 537253 526893 NC_000014.9 velvet.56986 99.78 True fake: scaffold gap size wrong estimation (local) 19775821 19784343 546249 537264 NC_000014.9 velvet.56986 99.92 True relocation, scaffold gap is present, inconsistency = 71927179 91711533 91713211 546260 547938 NC_000014.9 velvet.56986 99.88 True relocation, scaffold gap is present, inconsistency = -62061178 29652044 29654198 547949 550103 NC_000014.9 velvet.56986 100.0 True fake: scaffold gap size wrong estimation (local) 29654468 29657636 551168 554336 NC_000014.9 velvet.56986 99.97 True fake: scaffold gap size wrong estimation (local) 29657940 29665478 555433 563712 NC_000014.9 velvet.56986 99.99 True relocation, scaffold gap is present, inconsistency = 62056390 91721879 91723214 563723 565058 NC_000014.9 velvet.56986 99.85 True relocation, scaffold gap is present, inconsistency = 71933770 19786217 19787214 566949 565953 NC_000014.9 velvet.56986 99.7 True fake: scaffold gap size wrong estimation (local) 19752459 19754471 600522 598510 NC_000014.9 velvet.56986 100.0 True fake: scaffold gap size wrong estimation (local) 19751548 19752240 601908 601216 NC_000014.9 velvet.56986 100.0 True fake: scaffold gap size wrong estimation (local) 19750251 19751547 603333 602037 NC_000014.9 velvet.56986 99.85 True fake: scaffold gap size wrong estimation (local) 19741913 19749339 612437 605011 NC_000014.9 velvet.56986 99.93 True relocation, scaffold gap is present, inconsistency = 9932586 29690108 29694979 620620 626375 NC_000014.9 velvet.56986 99.19 True fake: scaffold gap size wrong estimation (local) 29695268 29705398 627428 637830 NC_000014.9 velvet.56986 99.88 True fake: scaffold gap size wrong estimation (local) 29705488 29708607 638222 641341 NC_000014.9 velvet.56986 99.97 True fake: scaffold gap size wrong estimation (local) 29708726 29710718 641713 643704 NC_000014.9 velvet.56986 99.9 True fake: scaffold gap size wrong estimation (local) 29728179 29731880 656118 659819 NC_000014.9 velvet.56986 99.97 True fake: scaffold gap size wrong estimation (local) 29732168 29732926 660774 661532 NC_000014.9 velvet.56986 100.0 True relocation, scaffold gap is present, inconsistency = 48224909 77957846 77958366 661543 662063 NC_000014.9 velvet.56986 100.0 True local misassembly 77958638 77959718 662064 663144 NC_000014.9 velvet.56986 99.07 True relocation, scaffold gap is present, inconsistency = -48226599 29733400 29734046 663425 664071 NC_000014.9 velvet.56986 100.0 True fake: scaffold gap size wrong estimation (local) 29734316 29737060 665226 667970 NC_000014.9 velvet.56986 100.0 True relocation, scaffold gap is present, inconsistency = -1614859 28122212 28123698 667981 669467 NC_000014.9 velvet.56986 99.93 True fake: scaffold gap size wrong estimation (local) 28124133 28124692 670598 671157 NC_000014.9 velvet.56986 100.0 True fake: scaffold gap size wrong estimation (local) 28124908 28126657 671437 673186 NC_000014.9 velvet.56986 100.0 True fake: scaffold gap size wrong estimation (local) 28126791 28127714 673830 674752 NC_000014.9 velvet.56986 99.78 True fake: scaffold gap size wrong estimation (local) 28127978 28132477 675408 680072 NC_000014.9 velvet.56986 99.93 True fake: scaffold gap size wrong estimation (local) 28132769 28136003 680963 685036 NC_000014.9 velvet.56986 97.66 True fake: scaffold gap size wrong estimation (local) 28136271 28137249 685227 686205 NC_000014.9 velvet.56986 99.8 True fake: scaffold gap size wrong estimation (local) 28139560 28140538 688991 689969 NC_000014.9 velvet.56986 99.9 True relocation, scaffold gap is present, inconsistency = 48803905 76944454 76945165 689980 690691 NC_000014.9 velvet.56986 100.0 True relocation, scaffold gap is present, inconsistency = -47183832 29763393 29768721 692751 698079 NC_000014.9 velvet.56986 100.0 True relocation, scaffold gap is present, inconsistency = 48227290 77996022 77999916 698090 701984 NC_000014.9 velvet.56986 99.97 True relocation, scaffold gap is present, inconsistency = -49881088 28121404 28122105 704560 705261 NC_000014.9 velvet.56986 100.0 True relocation, scaffold gap is present, inconsistency = 1599561 29721677 29726768 710473 705272 NC_000014.9 velvet.56986 100.0 True relocation, scaffold gap is present, inconsistency = 48275460 78002400 78007776 710645 716077 NC_000014.9 velvet.56986 99.16 True fake: scaffold gap size wrong estimation (local) 78008062 78008864 716855 717657 NC_000014.9 velvet.56986 100.0 True fake: not a misassembly (possible transposable element) 20406043 20407415 717668 719040 NC_000014.9 velvet.56986 100.0 True fake: not a misassembly (possible transposable element) 78009500 78013110 720424 724034 NC_000014.9 velvet.56986 99.89 True relocation, scaffold gap is present, inconsistency = 49958003 28042402 28049685 732977 725846 NC_000014.9 velvet.56986 97.79 True fake: not a misassembly (possible transposable element) 61964582 61967974 738947 735472 NC_000014.9 velvet.56986 99.97 True fake: not a misassembly (possible transposable element) 28036571 28040823 743960 738958 NC_000014.9 velvet.56986 99.55 True relocation, scaffold gap is present, inconsistency = 33897648 61961171 61964596 766660 770208 NC_000014.9 velvet.56986 96.41 True relocation, scaffold gap is present, inconsistency = 28843 61923051 61932317 779631 770219 NC_000014.9 velvet.56986 98.26 True fake: scaffold gap size wrong estimation (local) 61910802 61922173 792975 781430 NC_000014.9 velvet.56986 99.44 True inversion, scaffold gap is present 61903295 61905760 793785 796250 NC_000014.9 velvet.56986 99.51 True fake: scaffold gap size wrong estimation (local) 61906022 61906696 796791 797465 NC_000014.9 velvet.56986 99.41 True local misassembly 61906801 61908872 797466 799537 NC_000014.9 velvet.56986 99.76 True inversion, scaffold gap is present 61909074 61910229 800703 799548 NC_000014.9 velvet.56986 99.83 True fake: scaffold gap size wrong estimation (extensive) 61900428 61901734 802019 800714 NC_000014.9 velvet.56986 99.69 True local misassembly 61901999 61902655 803081 802425 NC_000014.9 velvet.56986 100.0 True fake: scaffold gap size wrong estimation (local) 61894157 61900155 811739 805623 NC_000014.9 velvet.56986 99.9 True fake: scaffold gap size wrong estimation (local) 61889799 61891231 813245 811807 NC_000014.9 velvet.56986 99.86 True local misassembly 61891251 61894004 816009 813256 NC_000014.9 velvet.56986 99.96 True relocation, scaffold gap is present, inconsistency = 29137 61932688 61938878 825556 831799 NC_000014.9 velvet.56986 98.85 True relocation, scaffold gap is present, inconsistency = -33889687 28053188 28056013 835796 838621 NC_000014.9 velvet.56986 99.43 True fake: not a misassembly (possible transposable element) 62089319 62090909 840365 838776 NC_000014.9 velvet.56986 99.81 True fake: not a misassembly (possible transposable element) 28051323 28053156 840376 842209 NC_000014.9 velvet.56986 99.67 True fake: scaffold gap size wrong estimation (local) 28056952 28067454 842220 854114 NC_000014.9 velvet.56986 98.82 True relocation, scaffold gap is present, inconsistency = 33920031 61989568 61993225 856197 859899 NC_000014.9 velvet.56986 99.75 True fake: scaffold gap size wrong estimation (local) 61993397 62003029 860724 870425 NC_000014.9 velvet.56986 99.98 True fake: scaffold gap size wrong estimation (local) 62003122 62004164 870567 871609 NC_000014.9 velvet.56986 100.0 True fake: not a misassembly (possible transposable element) 64558942 64559853 888169 889082 NC_000014.9 velvet.56986 99.67 True fake: not a misassembly (possible transposable element) 62018605 62021490 889093 891978 NC_000014.9 velvet.56986 99.93 True relocation, scaffold gap is present, inconsistency = 38833526 100873456 100877080 910418 914131 NC_000014.9 velvet.56986 97.57 True fake: scaffold gap size wrong estimation (local) 100877372 100887516 915228 925584 NC_000014.9 velvet.56986 99.97 True relocation, scaffold gap is present, inconsistency = 38817596 62058638 62059765 926738 925595 NC_000014.9 velvet.56986 96.45 True fake: scaffold gap size wrong estimation (local) 62054631 62058317 931582 927579 NC_000014.9 velvet.56986 99.78 True fake: scaffold gap size wrong estimation (local) 62051889 62054289 934928 932528 NC_000014.9 velvet.56986 99.92 True fake: not a misassembly (possible transposable element) 100887723 100894118 944343 950882 NC_000014.9 velvet.56986 99.98 True fake: not a misassembly (possible transposable element) 62041622 62042195 951466 950893 NC_000014.9 velvet.56986 100.0 True fake: scaffold gap size wrong estimation (local) 62036821 62041509 957881 952404 NC_000014.9 velvet.56986 99.8 True local misassembly 62029252 62036775 966314 958016 NC_000014.9 velvet.56986 99.89 True fake: scaffold gap size wrong estimation (local) 62022045 62029158 973815 966693 NC_000014.9 velvet.56986 99.93 True relocation, scaffold gap is present, inconsistency = -2540144 64560304 64562162 975741 973842 NC_000014.9 velvet.56986 99.84 True relocation, scaffold gap is present, inconsistency = 25620 64588035 64588576 975994 976535 NC_000014.9 velvet.56986 98.15 True local misassembly 64588866 64589655 976536 977325 NC_000014.9 velvet.56986 98.61 True relocation, scaffold gap is present, inconsistency = -12171979 52418913 52425178 978562 984827 NC_000014.9 velvet.56986 99.98 True relocation, scaffold gap is present, inconsistency = 9542532 61968227 61975874 985344 993732 NC_000014.9 velvet.56986 99.93 True fake: scaffold gap size wrong estimation (local) 62004421 62013776 1018225 1027859 NC_000014.9 velvet.56986 99.99 True fake: scaffold gap size wrong estimation (local) 62014694 62016427 1029588 1031321 NC_000014.9 velvet.56986 100.0 True fake: scaffold gap size wrong estimation (local) 62016729 62017738 1032070 1033079 NC_000014.9 velvet.56986 99.9 True CONTIG velvet.56986 1033664 misassembled CONTIG velvet.57022 200 unaligned 50048970 50050449 1480 1 NC_000014.9 velvet.57043 99.93 True fake: scaffold gap size wrong estimation (local) 50048045 50048687 3228 2586 NC_000014.9 velvet.57043 99.84 True fake: scaffold gap size wrong estimation (local) 50047140 50047925 4100 3315 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 50030954 50032663 14371 12636 NC_000014.9 velvet.57043 96.84 True fake: scaffold gap size wrong estimation (local) 50029343 50030399 16024 14968 NC_000014.9 velvet.57043 99.91 True fake: scaffold gap size wrong estimation (local) 50027094 50029065 18719 16749 NC_000014.9 velvet.57043 99.59 True fake: scaffold gap size wrong estimation (local) 50026336 50026810 19782 19265 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 50016993 50023049 27755 21699 NC_000014.9 velvet.57043 99.83 True fake: scaffold gap size wrong estimation (local) 50014775 50016701 30695 28769 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (extensive) 50004715 50006605 32596 30706 NC_000014.9 velvet.57043 99.95 True relocation, scaffold gap is present, inconsistency = -7372 50010291 50011930 34392 32753 NC_000014.9 velvet.57043 99.94 True fake: scaffold gap size wrong estimation (local) 50003833 50004449 35407 34791 NC_000014.9 velvet.57043 100.0 True relocation, scaffold gap is present, inconsistency = -7192 50008892 50009540 37540 36892 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 49998792 50003811 45031 39787 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 49997230 49998534 47234 45930 NC_000014.9 velvet.57043 99.85 True fake: scaffold gap size wrong estimation (local) 49995242 49996479 49557 48331 NC_000014.9 velvet.57043 98.78 True relocation, scaffold gap is present, inconsistency = -15567 50006860 50007922 53506 52444 NC_000014.9 velvet.57043 100.0 True relocation, scaffold gap is present, inconsistency = -43415501 93420212 93420757 55655 55110 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 93419421 93420091 57550 56880 NC_000014.9 velvet.57043 99.55 True fake: scaffold gap size wrong estimation (local) 93405267 93413029 76133 68361 NC_000014.9 velvet.57043 99.81 True fake: scaffold gap size wrong estimation (local) 93404532 93405141 76820 76219 NC_000014.9 velvet.57043 98.52 True fake: scaffold gap size wrong estimation (local) 93402296 93404296 79636 77590 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 93399015 93401993 83718 80759 NC_000014.9 velvet.57043 99.29 True relocation, scaffold gap is present, inconsistency = 10884 93385778 93386921 86071 84928 NC_000014.9 velvet.57043 99.56 True relocation, scaffold gap is present, inconsistency = 13157 93366844 93370524 91843 88168 NC_000014.9 velvet.57043 99.84 True fake: scaffold gap size wrong estimation (local) 93365385 93366555 93945 92775 NC_000014.9 velvet.57043 99.91 True relocation, scaffold gap is present, inconsistency = -19642 93377374 93383783 101598 95189 NC_000014.9 velvet.57043 99.95 True fake: scaffold gap size wrong estimation (local) 93375843 93377083 103756 102515 NC_000014.9 velvet.57043 99.84 True fake: scaffold gap size wrong estimation (local) 93371760 93375183 108388 104965 NC_000014.9 velvet.57043 99.8 True relocation, scaffold gap is present, inconsistency = 43390051 49974990 49981698 115107 108399 NC_000014.9 velvet.57043 99.97 True relocation, scaffold gap is present, inconsistency = -21186 49994123 49994666 117160 116617 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 49989574 49993844 122582 118312 NC_000014.9 velvet.57043 99.95 True fake: scaffold gap size wrong estimation (local) 49981894 49983098 124050 122846 NC_000014.9 velvet.57043 99.83 True relocation, scaffold gap is present, inconsistency = -7429 49987920 49989312 125453 124061 NC_000014.9 velvet.57043 99.78 True fake: scaffold gap size wrong estimation (local) 49985735 49987607 127929 126057 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 49959891 49960405 153000 152486 NC_000014.9 velvet.57043 98.06 True relocation, scaffold gap is present, inconsistency = -23381166 73334952 73336953 159151 157104 NC_000014.9 velvet.57043 99.7 True fake: scaffold gap size wrong estimation (local) 73332530 73333415 162450 161565 NC_000014.9 velvet.57043 99.89 True fake: scaffold gap size wrong estimation (local) 73330284 73331284 165690 164686 NC_000014.9 velvet.57043 99.5 True fake: scaffold gap size wrong estimation (local) 73329117 73330056 167564 166625 NC_000014.9 velvet.57043 98.83 True local misassembly 73328275 73328882 168172 167565 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 73322953 73326351 174527 170947 NC_000014.9 velvet.57043 96.86 True fake: scaffold gap size wrong estimation (local) 73320104 73322859 178100 175355 NC_000014.9 velvet.57043 99.56 True fake: scaffold gap size wrong estimation (local) 73298273 73301439 193206 190047 NC_000014.9 velvet.57043 99.68 True fake: scaffold gap size wrong estimation (local) 73297147 73297889 194962 194220 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 73295063 73296166 197530 196427 NC_000014.9 velvet.57043 99.91 True fake: scaffold gap size wrong estimation (local) 73293647 73294527 200895 200015 NC_000014.9 velvet.57043 98.86 True local misassembly 73291954 73293381 202323 200896 NC_000014.9 velvet.57043 99.86 True fake: scaffold gap size wrong estimation (local) 73288841 73291067 206383 204067 NC_000014.9 velvet.57043 95.9 True fake: scaffold gap size wrong estimation (local) 73280960 73284827 211317 206394 NC_000014.9 velvet.57043 99.95 True fake: scaffold gap size wrong estimation (local) 73280161 73280681 211931 211411 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 73278993 73279869 213082 212206 NC_000014.9 velvet.57043 99.89 True fake: scaffold gap size wrong estimation (extensive) 73240552 73242998 243918 241472 NC_000014.9 velvet.57043 100.0 True relocation, scaffold gap is present, inconsistency = -7094 73243265 73246284 248299 245280 NC_000014.9 velvet.57043 100.0 True relocation, scaffold gap is present, inconsistency = 8754261 64486333 64488993 248310 250970 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 64494650 64495705 250981 252036 NC_000014.9 velvet.57043 99.91 True fake: scaffold gap size wrong estimation (local) 64496503 64498321 253630 255448 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 64499598 64500476 257584 258462 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 64518152 64519163 276166 277178 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 64521397 64523994 280228 282825 NC_000014.9 velvet.57043 100.0 True local misassembly 64527774 64528362 282826 283414 NC_000014.9 velvet.57043 98.3 True fake: scaffold gap size wrong estimation (local) 64528363 64529567 283462 284666 NC_000014.9 velvet.57043 98.84 True fake: scaffold gap size wrong estimation (local) 64529769 64530362 285043 285636 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 64530632 64535455 286649 291471 NC_000014.9 velvet.57043 99.88 True fake: scaffold gap size wrong estimation (local) 64535968 64536513 292795 293340 NC_000014.9 velvet.57043 99.82 True local misassembly 64536620 64537424 293341 294145 NC_000014.9 velvet.57043 98.51 True fake: scaffold gap size wrong estimation (local) 64538026 64539710 295267 296874 NC_000014.9 velvet.57043 95.28 True fake: scaffold gap size wrong estimation (local) 64542847 64544413 296885 298451 NC_000014.9 velvet.57043 99.74 True fake: not a misassembly (possible transposable element) 49917728 49918388 299601 298941 NC_000014.9 velvet.57043 98.49 True fake: not a misassembly (possible transposable element) 64539978 64542825 300126 302973 NC_000014.9 velvet.57043 99.89 True fake: not a misassembly (possible transposable element) 49914768 49916243 304459 302984 NC_000014.9 velvet.57043 100.0 True fake: not a misassembly (possible transposable element) 64544524 64545282 305226 305984 NC_000014.9 velvet.57043 99.74 True local misassembly 64545550 64546274 305985 306709 NC_000014.9 velvet.57043 98.34 True relocation, scaffold gap is present, inconsistency = 14631960 49911549 49912409 308750 307890 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 49910521 49911208 311068 310381 NC_000014.9 velvet.57043 100.0 True relocation, scaffold gap is present, inconsistency = -51202586 101100980 101102221 323195 321954 NC_000014.9 velvet.57043 99.84 True fake: scaffold gap size wrong estimation (local) 101094589 101099213 330256 325635 NC_000014.9 velvet.57043 99.7 True fake: scaffold gap size wrong estimation (local) 101093603 101094335 331673 330941 NC_000014.9 velvet.57043 99.59 True fake: scaffold gap size wrong estimation (local) 101087414 101089315 333585 331684 NC_000014.9 velvet.57043 99.84 True relocation, scaffold gap is present, inconsistency = 36506532 64579088 64579713 334754 335379 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 64580108 64582959 336244 339094 NC_000014.9 velvet.57043 99.86 True fake: scaffold gap size wrong estimation (local) 64584205 64585320 341112 342227 NC_000014.9 velvet.57043 99.91 True fake: scaffold gap size wrong estimation (local) 64609288 64614362 360129 365203 NC_000014.9 velvet.57043 100.0 True relocation, scaffold gap is present, inconsistency = 15127435 79741808 79744393 367800 365214 NC_000014.9 velvet.57043 99.92 True relocation, scaffold gap is present, inconsistency = -21369316 101105037 101105942 373887 372982 NC_000014.9 velvet.57043 99.78 True fake: scaffold gap size wrong estimation (local) 101099216 101100959 377518 375777 NC_000014.9 velvet.57043 99.83 True relocation, scaffold gap is present, inconsistency = 10525 101086375 101087391 379834 378818 NC_000014.9 velvet.57043 100.0 True local misassembly 101090716 101093346 382473 379845 NC_000014.9 velvet.57043 99.62 True fake: scaffold gap size wrong estimation (local) 101085811 101086353 383026 382484 NC_000014.9 velvet.57043 100.0 True local misassembly 101089549 101090430 384783 383902 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 101081538 101084810 388092 384799 NC_000014.9 velvet.57043 98.66 True fake: scaffold gap size wrong estimation (local) 101079816 101080704 390406 389518 NC_000014.9 velvet.57043 100.0 True relocation, scaffold gap is present, inconsistency = 36424237 64654219 64654844 391141 391766 NC_000014.9 velvet.57043 99.52 True indel: indel (> 5bp) 64654845 64655526 391773 392454 NC_000014.9 velvet.57043 99.85 True local misassembly 64655767 64656354 392455 393042 NC_000014.9 velvet.57043 97.96 True relocation, scaffold gap is present, inconsistency = 8048 64642207 64645073 398556 395688 NC_000014.9 velvet.57043 99.79 True fake: not a misassembly (possible transposable element) 64645112 64646608 398567 400062 NC_000014.9 velvet.57043 99.93 True fake: not a misassembly (possible transposable element) 64640719 64641360 400854 400213 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 64639408 64640181 401960 401187 NC_000014.9 velvet.57043 99.74 True relocation, scaffold gap is present, inconsistency = 15082405 79738844 79739394 418218 418768 NC_000014.9 velvet.57043 98.19 True relocation, scaffold gap is present, inconsistency = -15125028 64614377 64615804 418779 420206 NC_000014.9 velvet.57043 99.93 True relocation, scaffold gap is present, inconsistency = 36328075 100944362 100946969 420689 423296 NC_000014.9 velvet.57043 99.92 True relocation, scaffold gap is present, inconsistency = 25708967 75234257 75234937 424434 423754 NC_000014.9 velvet.57043 100.0 True relocation, scaffold gap is present, inconsistency = 10616456 64616231 64617790 424445 426031 NC_000014.9 velvet.57043 98.05 True fake: scaffold gap size wrong estimation (local) 64618101 64619939 426817 428655 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 64620244 64622281 429601 431638 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 64622519 64624454 432633 434568 NC_000014.9 velvet.57043 99.95 True fake: scaffold gap size wrong estimation (local) 64625011 64626282 435831 437102 NC_000014.9 velvet.57043 100.0 True local misassembly 64626353 64627679 437295 438615 NC_000014.9 velvet.57043 99.17 True fake: scaffold gap size wrong estimation (local) 64628041 64629586 439679 441224 NC_000014.9 velvet.57043 99.94 True fake: scaffold gap size wrong estimation (local) 64629842 64631345 441786 443278 NC_000014.9 velvet.57043 99.2 True relocation, scaffold gap is present, inconsistency = 15107417 79739685 79741471 444201 445949 NC_000014.9 velvet.57043 97.82 True relocation, scaffold gap is present, inconsistency = -27858 79713624 79715013 445960 447349 NC_000014.9 velvet.57043 99.93 True fake: scaffold gap size wrong estimation (local) 79715273 79731632 448390 465517 NC_000014.9 velvet.57043 99.79 True fake: scaffold gap size wrong estimation (local) 79731781 79737742 466472 472438 NC_000014.9 velvet.57043 99.77 True fake: scaffold gap size wrong estimation (local) 79761715 79762477 495528 496290 NC_000014.9 velvet.57043 100.0 True relocation, scaffold gap is present, inconsistency = -18716 79744448 79749446 496977 502016 NC_000014.9 velvet.57043 99.1 True fake: scaffold gap size wrong estimation (local) 79749530 79751031 502933 504435 NC_000014.9 velvet.57043 99.67 True fake: scaffold gap size wrong estimation (local) 79775583 79778158 527334 529970 NC_000014.9 velvet.57043 99.88 True relocation, scaffold gap is present, inconsistency = -14717 79763452 79767857 529981 534461 NC_000014.9 velvet.57043 99.66 True fake: scaffold gap size wrong estimation (local) 79798136 79803910 562298 568072 NC_000014.9 velvet.57043 99.98 True relocation, scaffold gap is present, inconsistency = -50331 79755036 79755546 569529 570039 NC_000014.9 velvet.57043 97.85 True fake: scaffold gap size wrong estimation (local) 79755547 79760421 570106 574980 NC_000014.9 velvet.57043 99.59 True fake: scaffold gap size wrong estimation (local) 79760908 79761551 576329 576972 NC_000014.9 velvet.57043 95.96 True fake: scaffold gap size wrong estimation (local) 79788047 79789414 602808 604175 NC_000014.9 velvet.57043 99.93 True relocation, scaffold gap is present, inconsistency = 12173626 91963051 91967159 604186 609104 NC_000014.9 velvet.57043 99.93 True fake: scaffold gap size wrong estimation (local) 91967441 91968996 609193 611162 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 91969320 91970155 611647 612482 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 91970465 91973042 613313 615890 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 91974049 91978792 617744 623118 NC_000014.9 velvet.57043 99.94 True relocation, scaffold gap is present, inconsistency = -12188260 79791035 79793171 623621 625669 NC_000014.9 velvet.57043 95.86 True fake: scaffold gap size wrong estimation (local) 79793444 79794120 626344 627020 NC_000014.9 velvet.57043 99.85 True fake: scaffold gap size wrong estimation (local) 79794428 79797848 627818 631238 NC_000014.9 velvet.57043 99.97 True fake: not a misassembly (possible transposable element) 28179949 28185611 638160 631570 NC_000014.9 velvet.57043 99.87 True fake: not a misassembly (possible transposable element) 79811882 79817137 652140 657395 NC_000014.9 velvet.57043 100.0 True relocation, scaffold gap is present, inconsistency = -13393 79804013 79806731 657664 660382 NC_000014.9 velvet.57043 99.96 True fake: scaffold gap size wrong estimation (local) 79807032 79808059 661444 662471 NC_000014.9 velvet.57043 99.03 True fake: scaffold gap size wrong estimation (local) 79808296 79809336 663126 664166 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 79809438 79811588 664351 666501 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 79818359 79819502 667399 668542 NC_000014.9 velvet.57043 99.74 True fake: scaffold gap size wrong estimation (local) 79819776 79826010 669509 675946 NC_000014.9 velvet.57043 98.14 True fake: scaffold gap size wrong estimation (local) 79826147 79827706 676861 678358 NC_000014.9 velvet.57043 95.81 True relocation, scaffold gap is present, inconsistency = 51648097 28176659 28178039 679700 678369 NC_000014.9 velvet.57043 96.35 True fake: scaffold gap size wrong estimation (local) 28150524 28161866 705923 694583 NC_000014.9 velvet.57043 99.91 True fake: scaffold gap size wrong estimation (local) 28144696 28147888 713016 709824 NC_000014.9 velvet.57043 99.91 True fake: scaffold gap size wrong estimation (local) 28140668 28144114 717858 714283 NC_000014.9 velvet.57043 99.82 True fake: scaffold gap size wrong estimation (local) 28111755 28113136 741762 740392 NC_000014.9 velvet.57043 99.05 True fake: scaffold gap size wrong estimation (local) 28107087 28110849 747384 743534 NC_000014.9 velvet.57043 99.87 True fake: scaffold gap size wrong estimation (local) 28104804 28106826 750397 748375 NC_000014.9 velvet.57043 99.9 True fake: not a misassembly (possible transposable element) 29761783 29762875 751505 750413 NC_000014.9 velvet.57043 100.0 True fake: not a misassembly (possible transposable element) 28097590 28104530 758437 751516 NC_000014.9 velvet.57043 99.71 True fake: scaffold gap size wrong estimation (local) 28082149 28097326 774637 759460 NC_000014.9 velvet.57043 99.93 True fake: scaffold gap size wrong estimation (local) 28075624 28082028 781963 775559 NC_000014.9 velvet.57043 99.94 True fake: scaffold gap size wrong estimation (local) 28073083 28073628 785179 784634 NC_000014.9 velvet.57043 98.17 True indel: indel (> 5bp) 28072012 28073030 786198 785180 NC_000014.9 velvet.57043 100.0 True fake: scaffold gap size wrong estimation (local) 28068401 28071211 790582 787741 NC_000014.9 velvet.57043 98.84 True relocation, scaffold gap is present, inconsistency = 41976 28113198 28115048 790593 792441 NC_000014.9 velvet.57043 99.89 True fake: scaffold gap size wrong estimation (local) 28115152 28118066 792590 796211 NC_000014.9 velvet.57043 99.68 True fake: scaffold gap size wrong estimation (local) 28118850 28121381 796957 800233 NC_000014.9 velvet.57043 98.99 True CONTIG velvet.57043 800345 misassembled CONTIG velvet.57067 272 unaligned CONTIG velvet.57075 251 unaligned 25588319 25590536 5630 3414 NC_000014.9 velvet.57096 99.95 True fake: scaffold gap size wrong estimation (local) 25585236 25588195 9568 6572 NC_000014.9 velvet.57096 99.28 True relocation, scaffold gap is present, inconsistency = 11850834 37450114 37451825 20653 22364 NC_000014.9 velvet.57096 99.94 True fake: scaffold gap size wrong estimation (local) 37452296 37458621 23574 29899 NC_000014.9 velvet.57096 99.97 True fake: scaffold gap size wrong estimation (local) 37463376 37463986 35902 36512 NC_000014.9 velvet.57096 98.36 True fake: scaffold gap size wrong estimation (local) 37464212 37467802 37465 41054 NC_000014.9 velvet.57096 99.89 True fake: scaffold gap size wrong estimation (local) 37468085 37470525 42087 44593 NC_000014.9 velvet.57096 97.79 True fake: scaffold gap size wrong estimation (local) 37470670 37474408 45606 49344 NC_000014.9 velvet.57096 99.95 True fake: scaffold gap size wrong estimation (local) 37497304 37502046 75199 79941 NC_000014.9 velvet.57096 99.92 True relocation, scaffold gap is present, inconsistency = 12067237 25428825 25430056 81183 79952 NC_000014.9 velvet.57096 99.43 True fake: scaffold gap size wrong estimation (local) 25426417 25427613 84338 83175 NC_000014.9 velvet.57096 96.55 True relocation, scaffold gap is present, inconsistency = 198631 25637620 25643069 95714 101163 NC_000014.9 velvet.57096 99.93 True relocation, scaffold gap is present, inconsistency = 11883945 37532894 37533995 107043 108144 NC_000014.9 velvet.57096 100.0 True fake: scaffold gap size wrong estimation (local) 37534104 37538955 108936 113785 NC_000014.9 velvet.57096 99.94 True fake: scaffold gap size wrong estimation (local) 37539222 37543416 114835 119283 NC_000014.9 velvet.57096 99.78 True fake: scaffold gap size wrong estimation (local) 37543543 37546838 120115 123410 NC_000014.9 velvet.57096 100.0 True fake: scaffold gap size wrong estimation (local) 37570024 37571193 141842 143011 NC_000014.9 velvet.57096 99.91 True fake: scaffold gap size wrong estimation (local) 37571472 37572286 143108 143922 NC_000014.9 velvet.57096 98.77 True relocation, scaffold gap is present, inconsistency = -20374 37551923 37554649 143933 146707 NC_000014.9 velvet.57096 99.85 True fake: scaffold gap size wrong estimation (local) 37588890 37593503 173985 178717 NC_000014.9 velvet.57096 99.93 True CONTIG velvet.57096 178717 misassembled CONTIG velvet.57139 583 unaligned CONTIG velvet.57165 265 unaligned CONTIG velvet.57185 379 unaligned 67337518 67339011 1 1494 NC_000014.9 velvet.57201 100.0 True fake: scaffold gap size wrong estimation (local) 67339297 67339846 3019 3568 NC_000014.9 velvet.57201 100.0 True fake: scaffold gap size wrong estimation (local) 67342230 67344636 6610 9047 NC_000014.9 velvet.57201 97.99 True fake: scaffold gap size wrong estimation (local) 67345559 67346118 10838 11397 NC_000014.9 velvet.57201 100.0 True relocation, scaffold gap is present, inconsistency = 29089938 96461850 96462854 38195 37191 NC_000014.9 velvet.57201 100.0 True fake: scaffold gap size wrong estimation (local) 96459805 96461575 41208 39438 NC_000014.9 velvet.57201 99.38 True fake: scaffold gap size wrong estimation (local) 96457326 96458292 44599 43633 NC_000014.9 velvet.57201 100.0 True fake: scaffold gap size wrong estimation (local) 96456239 96457048 46128 45319 NC_000014.9 velvet.57201 100.0 True fake: scaffold gap size wrong estimation (local) 96455144 96455961 47226 46409 NC_000014.9 velvet.57201 99.88 True fake: scaffold gap size wrong estimation (local) 96452734 96454646 50593 48681 NC_000014.9 velvet.57201 99.95 True fake: scaffold gap size wrong estimation (local) 96451038 96452338 53119 51819 NC_000014.9 velvet.57201 99.77 True relocation, scaffold gap is present, inconsistency = 41412088 55033084 55033893 58176 58985 NC_000014.9 velvet.57201 99.88 True fake: scaffold gap size wrong estimation (local) 55035162 55035849 60812 61483 NC_000014.9 velvet.57201 97.53 True relocation, scaffold gap is present, inconsistency = -20282330 34754450 34756067 62414 63960 NC_000014.9 velvet.57201 95.58 True fake: scaffold gap size wrong estimation (local) 34758579 34759194 67649 68264 NC_000014.9 velvet.57201 100.0 True relocation, scaffold gap is present, inconsistency = 46087679 80848644 80856661 78257 70035 NC_000014.9 velvet.57201 99.11 True fake: scaffold gap size wrong estimation (local) 80839078 80848382 88734 79430 NC_000014.9 velvet.57201 99.97 True fake: scaffold gap size wrong estimation (local) 80837678 80838882 90530 89326 NC_000014.9 velvet.57201 99.92 True fake: scaffold gap size wrong estimation (local) 80832245 80837435 96550 91360 NC_000014.9 velvet.57201 99.94 True fake: scaffold gap size wrong estimation (local) 80828415 80831594 102372 98669 NC_000014.9 velvet.57201 99.78 True fake: scaffold gap size wrong estimation (local) 80826106 80828107 105081 103080 NC_000014.9 velvet.57201 99.9 True fake: scaffold gap size wrong estimation (local) 80824284 80824800 107675 107160 NC_000014.9 velvet.57201 99.03 True relocation, scaffold gap is present, inconsistency = 46028990 34788597 34790181 112788 114372 NC_000014.9 velvet.57201 99.31 True local misassembly 34785156 34786532 114872 116248 NC_000014.9 velvet.57201 100.0 True fake: scaffold gap size wrong estimation (local) 34791179 34792134 116259 117214 NC_000014.9 velvet.57201 100.0 True local misassembly 34792405 34793556 117215 118366 NC_000014.9 velvet.57201 99.13 True fake: scaffold gap size wrong estimation (local) 34794141 34796053 119843 121755 NC_000014.9 velvet.57201 100.0 True fake: scaffold gap size wrong estimation (local) 34796201 34797303 122541 123643 NC_000014.9 velvet.57201 100.0 True relocation, scaffold gap is present, inconsistency = 46004269 80802345 80807043 129913 124416 NC_000014.9 velvet.57201 99.91 True fake: scaffold gap size wrong estimation (local) 80800056 80801135 132272 131193 NC_000014.9 velvet.57201 99.91 True fake: scaffold gap size wrong estimation (local) 80796382 80799185 136798 133995 NC_000014.9 velvet.57201 99.86 True fake: scaffold gap size wrong estimation (local) 80792456 80796284 141008 137180 NC_000014.9 velvet.57201 99.92 True relocation, scaffold gap is present, inconsistency = 45976217 34815078 34816104 141143 142169 NC_000014.9 velvet.57201 99.81 True inversion, scaffold gap is present 34816361 34817301 143120 142180 NC_000014.9 velvet.57201 100.0 True fake: scaffold gap size wrong estimation (local) 34814045 34814724 146093 145446 NC_000014.9 velvet.57201 95.22 True fake: scaffold gap size wrong estimation (local) 34811587 34813206 148752 147133 NC_000014.9 velvet.57201 100.0 True relocation, scaffold gap is present, inconsistency = 7401 34803401 34804045 148893 149540 NC_000014.9 velvet.57201 99.54 True fake: scaffold gap size wrong estimation (local) 34804303 34806497 150684 152942 NC_000014.9 velvet.57201 99.63 True fake: scaffold gap size wrong estimation (local) 34808499 34809101 155278 155880 NC_000014.9 velvet.57201 100.0 True fake: scaffold gap size wrong estimation (local) 34809121 34810696 157197 158772 NC_000014.9 velvet.57201 99.37 True fake: not a misassembly (possible transposable element) 80789864 80792424 161894 159257 NC_000014.9 velvet.57201 97.45 True fake: not a misassembly (possible transposable element) 34817623 34818888 161895 163160 NC_000014.9 velvet.57201 99.93 True local misassembly 34819164 34820152 163161 164149 NC_000014.9 velvet.57201 98.99 True fake: not a misassembly (possible transposable element) 80786916 80789795 167040 164160 NC_000014.9 velvet.57201 99.93 True fake: not a misassembly (possible transposable element) 34845912 34846997 186296 187381 NC_000014.9 velvet.57201 99.91 True relocation, scaffold gap is present, inconsistency = -9474 34837534 34838551 187392 188409 NC_000014.9 velvet.57201 99.9 True fake: scaffold gap size wrong estimation (local) 34839946 34840518 190980 191552 NC_000014.9 velvet.57201 100.0 True relocation, scaffold gap is present, inconsistency = -9010 34833538 34835108 193582 195152 NC_000014.9 velvet.57201 100.0 True fake: scaffold gap size wrong estimation (local) 34841667 34843942 195163 197438 NC_000014.9 velvet.57201 99.96 True fake: scaffold gap size wrong estimation (local) 34879559 34880068 230513 231022 NC_000014.9 velvet.57201 100.0 True local misassembly 34880326 34881503 231023 232200 NC_000014.9 velvet.57201 99.07 True fake: scaffold gap size wrong estimation (local) 34883210 34884207 235036 236002 NC_000014.9 velvet.57201 96.46 True fake: scaffold gap size wrong estimation (local) 34885574 34887087 238203 239716 NC_000014.9 velvet.57201 99.93 True fake: scaffold gap size wrong estimation (local) 34898191 34898729 244091 244629 NC_000014.9 velvet.57201 99.81 True fake: scaffold gap size wrong estimation (local) 34906327 34908019 254290 255982 NC_000014.9 velvet.57201 100.0 True fake: scaffold gap size wrong estimation (local) 34910417 34912158 260074 261815 NC_000014.9 velvet.57201 99.77 True fake: scaffold gap size wrong estimation (local) 34912812 34913772 263423 264383 NC_000014.9 velvet.57201 100.0 True fake: scaffold gap size wrong estimation (local) 34914122 34914692 264594 265164 NC_000014.9 velvet.57201 100.0 True fake: scaffold gap size wrong estimation (local) 34916349 34916983 267642 268274 NC_000014.9 velvet.57201 99.69 True CONTIG velvet.57201 308136 misassembled CONTIG velvet.57210 361 unaligned 21283909 21284560 8423 9074 NC_000014.9 velvet.57377 100.0 True unknown 21284784 21285358 9075 9649 NC_000014.9 velvet.57377 98.26 True unknown 21286784 21288197 12097 13476 NC_000014.9 velvet.57377 97.58 True unknown CONTIG velvet.57377 20177 mis_unaligned CONTIG velvet.57390 212 unaligned 34433965 34435641 1683 7 NC_000014.9 velvet.57406 100.0 True relocation, scaffold gap is present, inconsistency = 9121 34445533 34446382 2454 3349 NC_000014.9 velvet.57406 100.0 True CONTIG velvet.57406 3349 misassembled 49695243 49695794 5755 5204 NC_000014.9 velvet.57409 100.0 True fake: scaffold gap size wrong estimation (local) 49664363 49665673 30724 29414 NC_000014.9 velvet.57409 100.0 True fake: scaffold gap size wrong estimation (local) 49662339 49663743 33510 32106 NC_000014.9 velvet.57409 99.64 True local misassembly 49661154 49662338 34872 33688 NC_000014.9 velvet.57409 100.0 True fake: scaffold gap size wrong estimation (local) 49659210 49660606 37229 35833 NC_000014.9 velvet.57409 100.0 True fake: scaffold gap size wrong estimation (local) 49652310 49656069 46014 41792 NC_000014.9 velvet.57409 98.51 True fake: scaffold gap size wrong estimation (local) 49650733 49652139 48213 46807 NC_000014.9 velvet.57409 100.0 True relocation, scaffold gap is present, inconsistency = -35741710 85385802 85389649 54854 51007 NC_000014.9 velvet.57409 99.74 True local misassembly 85378407 85382661 59109 54855 NC_000014.9 velvet.57409 98.14 True fake: scaffold gap size wrong estimation (local) 85376442 85378406 61950 59986 NC_000014.9 velvet.57409 99.95 True relocation, scaffold gap is present, inconsistency = 35742979 49613733 49615070 81680 80343 NC_000014.9 velvet.57409 100.0 True fake: scaffold gap size wrong estimation (local) 49611915 49612925 84634 83624 NC_000014.9 velvet.57409 99.01 True relocation, scaffold gap is present, inconsistency = -35708651 85317274 85318548 87926 86652 NC_000014.9 velvet.57409 100.0 True fake: scaffold gap size wrong estimation (local) 85300914 85310332 97859 87937 NC_000014.9 velvet.57409 99.98 True fake: scaffold gap size wrong estimation (local) 85298676 85300653 100847 98870 NC_000014.9 velvet.57409 99.95 True fake: scaffold gap size wrong estimation (local) 85261607 85262883 133226 131959 NC_000014.9 velvet.57409 98.82 True fake: scaffold gap size wrong estimation (local) 85259950 85261378 134788 133362 NC_000014.9 velvet.57409 99.23 True fake: scaffold gap size wrong estimation (local) 85256317 85259671 139341 135852 NC_000014.9 velvet.57409 99.73 True CONTIG velvet.57409 140302 misassembled 83139871 83142834 27864 24089 NC_000014.9 velvet.57410 100.0 True fake: scaffold gap size wrong estimation (local) 83135248 83139788 32415 27875 NC_000014.9 velvet.57410 99.96 True relocation, scaffold gap is present, inconsistency = -13051 83146770 83148288 33944 32426 NC_000014.9 velvet.57410 99.8 True fake: scaffold gap size wrong estimation (local) 83145670 83146486 34958 34142 NC_000014.9 velvet.57410 99.88 True fake: scaffold gap size wrong estimation (local) 83143232 83144334 38322 37220 NC_000014.9 velvet.57410 100.0 True local misassembly 83145016 83145645 38962 38333 NC_000014.9 velvet.57410 100.0 True fake: scaffold gap size wrong estimation (extensive) 83131488 83135216 44914 41186 NC_000014.9 velvet.57410 99.89 True fake: scaffold gap size wrong estimation (local) 83118503 83131215 58739 45872 NC_000014.9 velvet.57410 99.79 True fake: scaffold gap size wrong estimation (local) 83115228 83118315 62796 59691 NC_000014.9 velvet.57410 99.39 True fake: scaffold gap size wrong estimation (local) 83107158 83114965 71268 63390 NC_000014.9 velvet.57410 99.99 True fake: scaffold gap size wrong estimation (local) 83103625 83106865 75489 72263 NC_000014.9 velvet.57410 99.44 True fake: scaffold gap size wrong estimation (local) 83102514 83103340 76996 76170 NC_000014.9 velvet.57410 100.0 True fake: scaffold gap size wrong estimation (local) 83101169 83102415 78690 77444 NC_000014.9 velvet.57410 99.84 True fake: scaffold gap size wrong estimation (local) 83099400 83100673 80861 79588 NC_000014.9 velvet.57410 99.92 True fake: scaffold gap size wrong estimation (local) 83095535 83098925 85303 81913 NC_000014.9 velvet.57410 99.94 True fake: scaffold gap size wrong estimation (local) 83093630 83095310 87979 86298 NC_000014.9 velvet.57410 99.64 True fake: scaffold gap size wrong estimation (local) 83082111 83092186 101090 90195 NC_000014.9 velvet.57410 98.0 True relocation, scaffold gap is present, inconsistency = 23118831 59958796 59962495 101875 105574 NC_000014.9 velvet.57410 99.97 True fake: scaffold gap size wrong estimation (local) 59962692 59965628 106396 109560 NC_000014.9 velvet.57410 99.69 True fake: scaffold gap size wrong estimation (local) 59965929 59968980 110604 113655 NC_000014.9 velvet.57410 99.97 True relocation, scaffold gap is present, inconsistency = 45087649 105057958 105062514 119540 114984 NC_000014.9 velvet.57410 99.93 True fake: scaffold gap size wrong estimation (local) 105055294 105057506 123045 120833 NC_000014.9 velvet.57410 99.86 True fake: not a misassembly (possible transposable element) 31678318 31683343 128138 123056 NC_000014.9 velvet.57410 99.9 True fake: not a misassembly (possible transposable element) 105049761 105052331 132104 129534 NC_000014.9 velvet.57410 99.96 True relocation, scaffold gap is present, inconsistency = 2466609 102575433 102575965 139291 139823 NC_000014.9 velvet.57410 100.0 True fake: scaffold gap size wrong estimation (local) 102577943 102579578 142210 143845 NC_000014.9 velvet.57410 99.94 True fake: scaffold gap size wrong estimation (local) 102579862 102580909 145173 146220 NC_000014.9 velvet.57410 99.9 True fake: scaffold gap size wrong estimation (local) 102583155 102584559 149215 150619 NC_000014.9 velvet.57410 99.64 True fake: scaffold gap size wrong estimation (local) 102611373 102611884 184406 184917 NC_000014.9 velvet.57410 99.8 True relocation, scaffold gap is present, inconsistency = 12762 102650273 102651281 211552 210544 NC_000014.9 velvet.57410 99.8 True inversion, scaffold gap is present 102643294 102647402 211563 215671 NC_000014.9 velvet.57410 99.9 True fake: scaffold gap size wrong estimation (local) 102648380 102649944 217438 219002 NC_000014.9 velvet.57410 100.0 True relocation, scaffold gap is present, inconsistency = -8751 102641204 102643028 219013 220872 NC_000014.9 velvet.57410 99.0 True fake: scaffold gap size wrong estimation (local) 102651596 102652961 227603 229027 NC_000014.9 velvet.57410 95.72 True fake: scaffold gap size wrong estimation (local) 102655140 102655710 231957 232527 NC_000014.9 velvet.57410 100.0 True CONTIG velvet.57410 232527 misassembled 103217243 103218547 6385 5030 NC_000014.9 velvet.57426 99.84 True fake: scaffold gap size wrong estimation (local) 103215751 103217057 8448 7141 NC_000014.9 velvet.57426 99.54 True fake: scaffold gap size wrong estimation (local) 103214239 103214893 10050 9396 NC_000014.9 velvet.57426 100.0 True fake: scaffold gap size wrong estimation (local) 103212120 103213961 13155 11314 NC_000014.9 velvet.57426 100.0 True relocation, scaffold gap is present, inconsistency = 36506148 66700883 66702419 18244 16708 NC_000014.9 velvet.57426 100.0 True relocation, scaffold gap is present, inconsistency = 36458479 103160909 103163958 18255 21304 NC_000014.9 velvet.57426 99.93 True fake: not a misassembly (possible transposable element) 103163950 103166926 25282 22306 NC_000014.9 velvet.57426 99.9 True fake: not a misassembly (possible transposable element) 103166961 103167760 26354 27153 NC_000014.9 velvet.57426 99.88 True fake: scaffold gap size wrong estimation (local) 103168000 103176227 28113 36340 NC_000014.9 velvet.57426 99.94 True inversion, scaffold gap is present 103178320 103179859 39816 38277 NC_000014.9 velvet.57426 99.81 True relocation, scaffold gap is present, inconsistency = -9336 103186218 103187435 41250 40037 NC_000014.9 velvet.57426 99.67 True fake: scaffold gap size wrong estimation (local) 103181425 103183772 45629 43282 NC_000014.9 velvet.57426 100.0 True fake: scaffold gap size wrong estimation (local) 103156329 103158345 73671 71655 NC_000014.9 velvet.57426 99.95 True relocation, scaffold gap is present, inconsistency = 414575 102736823 102740156 78602 75269 NC_000014.9 velvet.57426 100.0 True relocation, scaffold gap is present, inconsistency = 30834446 71901172 71902075 78904 79807 NC_000014.9 velvet.57426 99.56 True indel: indel (<= 5bp) 71902076 71904862 79811 82597 NC_000014.9 velvet.57426 99.53 True fake: scaffold gap size wrong estimation (local) 71904863 71905527 83647 84311 NC_000014.9 velvet.57426 98.95 True relocation, scaffold gap is present, inconsistency = 30846757 102752512 102756600 84539 88611 NC_000014.9 velvet.57426 99.49 True relocation, scaffold gap is present, inconsistency = 25373 102719612 102724323 96259 91427 NC_000014.9 velvet.57426 100.0 True fake: scaffold gap size wrong estimation (local) 102715620 102719251 101224 97491 NC_000014.9 velvet.57426 97.27 True fake: scaffold gap size wrong estimation (local) 102713557 102715072 104155 102640 NC_000014.9 velvet.57426 100.0 True fake: scaffold gap size wrong estimation (local) 102712376 102712941 105508 104899 NC_000014.9 velvet.57426 100.0 True fake: scaffold gap size wrong estimation (local) 102708371 102712208 110224 106387 NC_000014.9 velvet.57426 100.0 True fake: scaffold gap size wrong estimation (local) 102706826 102707801 112231 111256 NC_000014.9 velvet.57426 100.0 True fake: scaffold gap size wrong estimation (local) 102706121 102706736 113633 113017 NC_000014.9 velvet.57426 99.68 True fake: scaffold gap size wrong estimation (local) 102704701 102705845 114896 113723 NC_000014.9 velvet.57426 97.44 True fake: scaffold gap size wrong estimation (local) 102700407 102701851 119504 118020 NC_000014.9 velvet.57426 96.31 True fake: scaffold gap size wrong estimation (local) 102699158 102699738 121254 120674 NC_000014.9 velvet.57426 100.0 True relocation, scaffold gap is present, inconsistency = 142455 102556142 102556692 121265 121815 NC_000014.9 velvet.57426 99.82 True relocation, scaffold gap is present, inconsistency = 33497907 69050487 69058224 129667 121826 NC_000014.9 velvet.57426 100.0 True relocation, scaffold gap is present, inconsistency = 33498705 102556940 102558954 129678 131700 NC_000014.9 velvet.57426 99.55 True fake: scaffold gap size wrong estimation (local) 102559765 102561304 135001 136540 NC_000014.9 velvet.57426 99.81 True fake: scaffold gap size wrong estimation (local) 102565509 102566241 142322 143043 NC_000014.9 velvet.57426 98.48 True relocation, scaffold gap is present, inconsistency = 123761 102690013 102692435 145392 143054 NC_000014.9 velvet.57426 96.52 True fake: scaffold gap size wrong estimation (local) 102688190 102689787 147889 146292 NC_000014.9 velvet.57426 100.0 True fake: scaffold gap size wrong estimation (local) 102671044 102672215 165969 164842 NC_000014.9 velvet.57426 96.21 True fake: scaffold gap size wrong estimation (local) 102670137 102670728 167266 166675 NC_000014.9 velvet.57426 98.31 True local misassembly 102669312 102669990 167945 167267 NC_000014.9 velvet.57426 100.0 True fake: scaffold gap size wrong estimation (local) 102667489 102669085 170228 168632 NC_000014.9 velvet.57426 99.94 True fake: scaffold gap size wrong estimation (local) 102665385 102667219 172931 171097 NC_000014.9 velvet.57426 100.0 True fake: scaffold gap size wrong estimation (local) 102664239 102665023 174565 173787 NC_000014.9 velvet.57426 99.24 True fake: scaffold gap size wrong estimation (local) 102661186 102664106 177927 175007 NC_000014.9 velvet.57426 99.97 True fake: scaffold gap size wrong estimation (local) 102658430 102661076 181262 178617 NC_000014.9 velvet.57426 99.96 True fake: scaffold gap size wrong estimation (local) 102657020 102657566 183585 183039 NC_000014.9 velvet.57426 98.17 True relocation, scaffold gap is present, inconsistency = 28668 102621565 102623413 188524 190368 NC_000014.9 velvet.57426 99.57 True relocation, scaffold gap is present, inconsistency = 12707 102638747 102639482 193776 192995 NC_000014.9 velvet.57426 99.86 True relocation, scaffold gap is present, inconsistency = 17226 102612498 102613124 202173 202799 NC_000014.9 velvet.57426 100.0 True fake: scaffold gap size wrong estimation (local) 102615752 102617605 205924 207714 NC_000014.9 velvet.57426 96.46 True fake: scaffold gap size wrong estimation (local) 102618266 102619158 209452 210338 NC_000014.9 velvet.57426 99.21 True fake: scaffold gap size wrong estimation (local) 102620527 102621389 212294 213153 NC_000014.9 velvet.57426 99.54 True fake: not a misassembly (possible transposable element) 102640109 102640762 213948 213295 NC_000014.9 velvet.57426 100.0 True fake: not a misassembly (possible transposable element) 102624466 102625255 214240 215022 NC_000014.9 velvet.57426 98.85 True fake: scaffold gap size wrong estimation (local) 102625615 102627414 216062 217861 NC_000014.9 velvet.57426 99.89 True fake: scaffold gap size wrong estimation (local) 102627991 102628736 218873 219609 NC_000014.9 velvet.57426 98.78 True fake: scaffold gap size wrong estimation (local) 102629052 102631219 221656 223822 NC_000014.9 velvet.57426 99.72 True fake: scaffold gap size wrong estimation (local) 102632790 102633727 226166 227102 NC_000014.9 velvet.57426 99.89 True fake: scaffold gap size wrong estimation (local) 102633837 102634601 228024 228788 NC_000014.9 velvet.57426 99.74 True relocation, scaffold gap is present, inconsistency = -19702837 82936925 82941528 233949 239446 NC_000014.9 velvet.57426 98.15 True fake: scaffold gap size wrong estimation (local) 82942145 82944172 241052 243067 NC_000014.9 velvet.57426 99.21 True fake: scaffold gap size wrong estimation (local) 82944508 82948168 244220 247880 NC_000014.9 velvet.57426 99.84 True fake: scaffold gap size wrong estimation (local) 82966059 82968613 261041 263585 NC_000014.9 velvet.57426 99.57 True fake: scaffold gap size wrong estimation (local) 82968866 82981689 264633 278254 NC_000014.9 velvet.57426 99.95 True fake: scaffold gap size wrong estimation (local) 82981977 82984938 279308 282269 NC_000014.9 velvet.57426 99.93 True fake: scaffold gap size wrong estimation (local) 82985205 82989824 283209 287987 NC_000014.9 velvet.57426 99.96 True fake: scaffold gap size wrong estimation (local) 82990120 82991029 289010 289919 NC_000014.9 velvet.57426 100.0 True fake: scaffold gap size wrong estimation (local) 82991134 82999316 290276 299338 NC_000014.9 velvet.57426 97.24 True fake: scaffold gap size wrong estimation (local) 82999455 83003009 299795 303633 NC_000014.9 velvet.57426 99.91 True fake: scaffold gap size wrong estimation (local) 83003290 83004651 304684 306045 NC_000014.9 velvet.57426 100.0 True fake: scaffold gap size wrong estimation (local) 83008445 83009069 306056 306725 NC_000014.9 velvet.57426 99.27 True local misassembly 83004727 83007182 306736 309191 NC_000014.9 velvet.57426 99.92 True fake: scaffold gap size wrong estimation (local) 83009086 83016534 311144 318689 NC_000014.9 velvet.57426 97.37 True fake: scaffold gap size wrong estimation (local) 83016764 83036452 319685 339920 NC_000014.9 velvet.57426 99.44 True fake: scaffold gap size wrong estimation (local) 83036994 83038304 341345 342656 NC_000014.9 velvet.57426 99.31 True fake: scaffold gap size wrong estimation (local) 83038474 83046027 343558 351927 NC_000014.9 velvet.57426 99.91 True fake: scaffold gap size wrong estimation (local) 83046302 83060117 352966 366981 NC_000014.9 velvet.57426 99.94 True fake: scaffold gap size wrong estimation (local) 83060637 83073630 368247 383616 NC_000014.9 velvet.57426 98.84 True fake: scaffold gap size wrong estimation (local) 83073785 83081863 384320 393270 NC_000014.9 velvet.57426 98.09 True CONTIG velvet.57426 393270 misassembled 27871180 27872089 910 1 NC_000014.9 velvet.57475 99.56 True fake: scaffold gap size wrong estimation (local) 27861847 27870930 13001 2173 NC_000014.9 velvet.57475 99.92 True CONTIG velvet.57475 14270 correct 43857419 43860090 1460 4131 NC_000014.9 velvet.57478 99.93 True fake: scaffold gap size wrong estimation (local) 43860520 43862169 5293 6942 NC_000014.9 velvet.57478 99.94 True CONTIG velvet.57478 9430 correct CONTIG velvet.57549 547 unaligned CONTIG velvet.57552 390 unaligned CONTIG velvet.57588 346 unaligned 70395494 70396152 659 1 NC_000014.9 velvet.57600 99.85 True local misassembly 70394459 70395373 1574 660 NC_000014.9 velvet.57600 100.0 True fake: scaffold gap size wrong estimation (local) 70391086 70392939 5749 3896 NC_000014.9 velvet.57600 99.95 True fake: scaffold gap size wrong estimation (local) 70387833 70390385 10159 7597 NC_000014.9 velvet.57600 99.0 True fake: scaffold gap size wrong estimation (local) 70385649 70387547 13099 11201 NC_000014.9 velvet.57600 100.0 True fake: scaffold gap size wrong estimation (local) 70384034 70385340 15294 13989 NC_000014.9 velvet.57600 99.08 True fake: scaffold gap size wrong estimation (local) 70382166 70383944 17381 15603 NC_000014.9 velvet.57600 99.55 True fake: not a misassembly (possible transposable element) 70367589 70368681 19205 18113 NC_000014.9 velvet.57600 100.0 True fake: not a misassembly (possible transposable element) 70378445 70380379 21785 19843 NC_000014.9 velvet.57600 99.02 True relocation, scaffold gap is present, inconsistency = 1962281 72342758 72348912 21883 28357 NC_000014.9 velvet.57600 99.74 True fake: scaffold gap size wrong estimation (local) 72349163 72353728 29412 33977 NC_000014.9 velvet.57600 99.85 True fake: scaffold gap size wrong estimation (local) 72377360 72380137 54836 57618 NC_000014.9 velvet.57600 99.43 True relocation, scaffold gap is present, inconsistency = 4038203 68338052 68338921 58723 57854 NC_000014.9 velvet.57600 99.77 True fake: not a misassembly (possible transposable element) 97820152 97821279 58734 59861 NC_000014.9 velvet.57600 99.65 True fake: not a misassembly (possible transposable element) 68335315 68337968 62805 60150 NC_000014.9 velvet.57600 99.81 True fake: scaffold gap size wrong estimation (local) 68331448 68334823 67162 63772 NC_000014.9 velvet.57600 99.62 True relocation, scaffold gap is present, inconsistency = 9885621 58444661 58445418 68371 67571 NC_000014.9 velvet.57600 99.72 True relocation, scaffold gap is present, inconsistency = 29887778 28555623 28556872 68382 69631 NC_000014.9 velvet.57600 100.0 True indel: indel (> 5bp) 28556881 28557549 69632 70300 NC_000014.9 velvet.57600 97.46 True local misassembly 28557550 28558129 71039 71618 NC_000014.9 velvet.57600 98.1 True relocation, scaffold gap is present, inconsistency = -37848 28523578 28526469 74915 77805 NC_000014.9 velvet.57600 99.86 True fake: scaffold gap size wrong estimation (local) 28526499 28529398 78590 81564 NC_000014.9 velvet.57600 97.45 True fake: scaffold gap size wrong estimation (local) 28531938 28532551 85096 85709 NC_000014.9 velvet.57600 99.84 True fake: scaffold gap size wrong estimation (local) 28533217 28535309 87207 89299 NC_000014.9 velvet.57600 99.67 True fake: not a misassembly (possible transposable element) 63188230 63189476 89472 90718 NC_000014.9 velvet.57600 100.0 True fake: not a misassembly (possible transposable element) 28546331 28548632 93782 96083 NC_000014.9 velvet.57600 99.96 True relocation, scaffold gap is present, inconsistency = 34641439 63190082 63190665 96094 96677 NC_000014.9 velvet.57600 100.0 True relocation, scaffold gap is present, inconsistency = -34648948 28558185 28562824 113145 117784 NC_000014.9 velvet.57600 99.89 True fake: scaffold gap size wrong estimation (local) 28563101 28563716 118865 119480 NC_000014.9 velvet.57600 99.51 True indel: indel (<= 5bp) 28563880 28566368 119642 122130 NC_000014.9 velvet.57600 99.52 True fake: scaffold gap size wrong estimation (local) 28566369 28567391 122246 123268 NC_000014.9 velvet.57600 98.34 True fake: scaffold gap size wrong estimation (local) 28567550 28568272 124121 124843 NC_000014.9 velvet.57600 99.45 True indel: indel (<= 5bp) 28568274 28578917 124844 135487 NC_000014.9 velvet.57600 99.98 True local misassembly 28582080 28585096 135488 138504 NC_000014.9 velvet.57600 99.67 True indel: indel (<= 5bp) 28585098 28586779 138505 140186 NC_000014.9 velvet.57600 99.41 True CONTIG velvet.57600 140579 misassembled CONTIG velvet.57650 228 unaligned CONTIG velvet.57670 3799 unaligned CONTIG velvet.57706 425 unaligned CONTIG velvet.57735 223 unaligned 105922387 105923172 33264 32479 NC_000014.9 velvet.57819 100.0 True CONTIG velvet.57819 33264 correct CONTIG velvet.57833 328 unaligned CONTIG velvet.57905 242 unaligned 34696081 34696856 776 1 NC_000014.9 velvet.57944 100.0 True fake: scaffold gap size wrong estimation (local) 34692889 34693825 4582 3646 NC_000014.9 velvet.57944 100.0 True CONTIG velvet.57944 4582 correct 35335288 35336125 1 838 NC_000014.9 velvet.57960 99.76 True local misassembly 35336345 35337020 839 1514 NC_000014.9 velvet.57960 98.37 True fake: scaffold gap size wrong estimation (local) 35337021 35338424 2246 3649 NC_000014.9 velvet.57960 97.79 True fake: scaffold gap size wrong estimation (local) 35340797 35342963 6665 8831 NC_000014.9 velvet.57960 99.82 True fake: scaffold gap size wrong estimation (local) 35343510 35344694 10335 11519 NC_000014.9 velvet.57960 100.0 True fake: scaffold gap size wrong estimation (local) 35346646 35347933 14213 15500 NC_000014.9 velvet.57960 99.15 True fake: scaffold gap size wrong estimation (local) 35349735 35350648 18514 19427 NC_000014.9 velvet.57960 100.0 True CONTIG velvet.57960 19427 correct CONTIG velvet.57980 340 unaligned CONTIG velvet.57988 230 unaligned 103324860 103325434 714 140 NC_000014.9 velvet.58004 99.65 True fake: scaffold gap size wrong estimation (local) 103320930 103321647 5881 5164 NC_000014.9 velvet.58004 100.0 True fake: scaffold gap size wrong estimation (local) 103318669 103319847 9159 7981 NC_000014.9 velvet.58004 100.0 True fake: scaffold gap size wrong estimation (local) 103286351 103289230 43525 40394 NC_000014.9 velvet.58004 95.86 True fake: scaffold gap size wrong estimation (local) 103282791 103285523 47863 45131 NC_000014.9 velvet.58004 99.93 True fake: scaffold gap size wrong estimation (local) 103281433 103282494 49938 48877 NC_000014.9 velvet.58004 100.0 True fake: scaffold gap size wrong estimation (local) 103280360 103281167 51058 50251 NC_000014.9 velvet.58004 100.0 True fake: scaffold gap size wrong estimation (local) 103279405 103280141 52283 51547 NC_000014.9 velvet.58004 99.73 True fake: scaffold gap size wrong estimation (local) 103276300 103278531 55998 53792 NC_000014.9 velvet.58004 96.55 True fake: scaffold gap size wrong estimation (local) 103274931 103275975 58802 57758 NC_000014.9 velvet.58004 100.0 True CONTIG velvet.58004 58802 correct 96557750 96559030 1280 1 NC_000014.9 velvet.58025 99.92 True fake: scaffold gap size wrong estimation (local) 96555240 96557092 4685 2890 NC_000014.9 velvet.58025 96.74 True inversion, scaffold gap is present 96559049 96559579 4696 5226 NC_000014.9 velvet.58025 100.0 True indel: indel (> 5bp) 96559631 96560363 5227 5959 NC_000014.9 velvet.58025 97.27 True fake: scaffold gap size wrong estimation (local) 96560364 96561840 7418 8894 NC_000014.9 velvet.58025 99.26 True inversion, scaffold gap is present 96549520 96553490 12934 8905 NC_000014.9 velvet.58025 100.0 True fake: not a misassembly (possible transposable element) 99373025 99376086 12945 16035 NC_000014.9 velvet.58025 98.84 True fake: not a misassembly (possible transposable element) 96543589 96549235 21692 16046 NC_000014.9 velvet.58025 99.95 True CONTIG velvet.58025 21692 misassembled 81454128 81455291 1 1164 NC_000014.9 velvet.58097 100.0 True CONTIG velvet.58097 1164 correct CONTIG velvet.58120 202 unaligned 39509483 39510885 1 1402 NC_000014.9 velvet.58195 99.43 True fake: scaffold gap size wrong estimation (local) 39512683 39516941 3967 8206 NC_000014.9 velvet.58195 99.41 True fake: scaffold gap size wrong estimation (local) 39518574 39519212 10444 11082 NC_000014.9 velvet.58195 99.84 True fake: scaffold gap size wrong estimation (local) 39519459 39521255 11874 13669 NC_000014.9 velvet.58195 99.67 True fake: scaffold gap size wrong estimation (local) 39527453 39528038 21447 22032 NC_000014.9 velvet.58195 100.0 True fake: scaffold gap size wrong estimation (local) 39528498 39530423 23485 25409 NC_000014.9 velvet.58195 99.79 True fake: not a misassembly (possible transposable element) 39530414 39531265 26271 25420 NC_000014.9 velvet.58195 100.0 True fake: not a misassembly (possible transposable element) 39552675 39553983 41317 42625 NC_000014.9 velvet.58195 99.77 True fake: scaffold gap size wrong estimation (local) 39554069 39556890 42812 45778 NC_000014.9 velvet.58195 95.33 True fake: scaffold gap size wrong estimation (local) 39557105 39560329 46737 50397 NC_000014.9 velvet.58195 99.94 True fake: scaffold gap size wrong estimation (local) 39560896 39564272 51496 55019 NC_000014.9 velvet.58195 99.79 True fake: scaffold gap size wrong estimation (local) 39565431 39566553 56854 57976 NC_000014.9 velvet.58195 99.91 True fake: scaffold gap size wrong estimation (local) 39566721 39584275 58862 77218 NC_000014.9 velvet.58195 99.59 True fake: scaffold gap size wrong estimation (local) 39590232 39593971 79585 83325 NC_000014.9 velvet.58195 99.92 True fake: scaffold gap size wrong estimation (local) 39597530 39599367 88366 90150 NC_000014.9 velvet.58195 96.87 True fake: scaffold gap size wrong estimation (local) 39601773 39602363 93237 93827 NC_000014.9 velvet.58195 100.0 True fake: scaffold gap size wrong estimation (local) 39602684 39605323 95012 97651 NC_000014.9 velvet.58195 100.0 True fake: scaffold gap size wrong estimation (local) 39605573 39607178 98744 100349 NC_000014.9 velvet.58195 100.0 True fake: scaffold gap size wrong estimation (local) 39607451 39608122 100689 101360 NC_000014.9 velvet.58195 100.0 True fake: scaffold gap size wrong estimation (local) 39632250 39633564 120827 122141 NC_000014.9 velvet.58195 99.77 True relocation, scaffold gap is present, inconsistency = -21316 39612259 39613189 122152 123082 NC_000014.9 velvet.58195 100.0 True fake: scaffold gap size wrong estimation (local) 39613465 39617862 123875 128272 NC_000014.9 velvet.58195 100.0 True relocation, scaffold gap is present, inconsistency = -10586 39608601 39611265 129597 132261 NC_000014.9 velvet.58195 99.96 True fake: scaffold gap size wrong estimation (local) 39618091 39618654 133821 134384 NC_000014.9 velvet.58195 100.0 True fake: scaffold gap size wrong estimation (local) 39618936 39621098 135117 137279 NC_000014.9 velvet.58195 100.0 True fake: scaffold gap size wrong estimation (local) 39645789 39655960 155912 167372 NC_000014.9 velvet.58195 99.98 True CONTIG velvet.58195 167463 misassembled 38508318 38509124 1190 384 NC_000014.9 velvet.58212 99.88 True fake: scaffold gap size wrong estimation (local) 38466848 38477224 38397 27226 NC_000014.9 velvet.58212 99.51 True relocation, scaffold gap is present, inconsistency = -22533 38486649 38487768 41137 40010 NC_000014.9 velvet.58212 99.91 True fake: scaffold gap size wrong estimation (local) 38479161 38480864 43034 41331 NC_000014.9 velvet.58212 99.88 True fake: scaffold gap size wrong estimation (local) 38465192 38465695 53512 53005 NC_000014.9 velvet.58212 98.43 True fake: scaffold gap size wrong estimation (local) 38463950 38464884 54659 53734 NC_000014.9 velvet.58212 98.61 True fake: scaffold gap size wrong estimation (local) 38457324 38461744 62767 57644 NC_000014.9 velvet.58212 99.95 True fake: scaffold gap size wrong estimation (local) 38454953 38457196 65685 63443 NC_000014.9 velvet.58212 99.82 True fake: not a misassembly (possible transposable element) 38447774 38450332 65696 69509 NC_000014.9 velvet.58212 100.0 True fake: not a misassembly (possible transposable element) 38453261 38454921 71219 69520 NC_000014.9 velvet.58212 97.47 True fake: not a misassembly (possible transposable element) 38450624 38452044 71440 72872 NC_000014.9 velvet.58212 95.62 True fake: not a misassembly (possible transposable element) 38446475 38447452 76486 75516 NC_000014.9 velvet.58212 98.66 True relocation, scaffold gap is present, inconsistency = -8738907 47177775 47180726 84053 81142 NC_000014.9 velvet.58212 98.64 True relocation, scaffold gap is present, inconsistency = 8721327 38444076 38446386 94115 96384 NC_000014.9 velvet.58212 95.66 True inversion, scaffold gap is present 38440024 38443048 99485 96396 NC_000014.9 velvet.58212 99.97 True fake: scaffold gap size wrong estimation (local) 38436970 38439737 103233 100420 NC_000014.9 velvet.58212 96.78 True fake: scaffold gap size wrong estimation (local) 38436070 38436725 104797 104142 NC_000014.9 velvet.58212 99.7 True local misassembly 38431301 38436024 109669 104946 NC_000014.9 velvet.58212 99.89 True fake: scaffold gap size wrong estimation (local) 38428423 38430960 113527 110774 NC_000014.9 velvet.58212 99.92 True fake: scaffold gap size wrong estimation (local) 38422448 38428140 121330 115231 NC_000014.9 velvet.58212 99.17 True fake: scaffold gap size wrong estimation (local) 38417976 38421911 127494 122817 NC_000014.9 velvet.58212 99.95 True fake: scaffold gap size wrong estimation (local) 38407827 38413474 138190 132543 NC_000014.9 velvet.58212 99.89 True relocation, scaffold gap is present, inconsistency = -8742822 47149279 47150638 139560 138201 NC_000014.9 velvet.58212 100.0 True fake: scaffold gap size wrong estimation (local) 47144882 47149023 144602 140461 NC_000014.9 velvet.58212 99.98 True fake: scaffold gap size wrong estimation (local) 47143216 47144669 147075 145622 NC_000014.9 velvet.58212 99.24 True local misassembly 47142444 47143101 147733 147076 NC_000014.9 velvet.58212 99.85 True fake: scaffold gap size wrong estimation (local) 47139888 47142161 151301 149028 NC_000014.9 velvet.58212 99.6 True fake: scaffold gap size wrong estimation (local) 47136466 47139765 155458 152159 NC_000014.9 velvet.58212 99.97 True relocation, scaffold gap is present, inconsistency = 8727903 38382170 38407540 181963 156481 NC_000014.9 velvet.58212 99.9 True relocation, scaffold gap is present, inconsistency = -8746523 47119335 47128682 191321 181974 NC_000014.9 velvet.58212 99.98 True fake: scaffold gap size wrong estimation (local) 47117063 47118825 194424 192662 NC_000014.9 velvet.58212 99.94 True fake: scaffold gap size wrong estimation (local) 47114960 47116399 197344 195905 NC_000014.9 velvet.58212 100.0 True relocation, scaffold gap is present, inconsistency = 10082726 37030038 37032210 199519 197368 NC_000014.9 velvet.58212 98.98 True fake: scaffold gap size wrong estimation (local) 37020439 37029752 209977 200664 NC_000014.9 velvet.58212 99.84 True fake: scaffold gap size wrong estimation (local) 37017188 37020438 217847 214597 NC_000014.9 velvet.58212 99.42 True relocation, scaffold gap is present, inconsistency = -49104529 86120220 86121706 219344 217858 NC_000014.9 velvet.58212 99.93 True relocation, scaffold gap is present, inconsistency = 47742448 38373603 38377761 223514 219355 NC_000014.9 velvet.58212 99.83 True fake: scaffold gap size wrong estimation (local) 38371261 38373096 226614 224737 NC_000014.9 velvet.58212 99.83 True fake: scaffold gap size wrong estimation (local) 38364047 38370778 234601 227871 NC_000014.9 velvet.58212 99.61 True fake: scaffold gap size wrong estimation (local) 38341787 38344315 253726 251172 NC_000014.9 velvet.58212 99.24 True fake: scaffold gap size wrong estimation (local) 38338011 38341212 258273 255072 NC_000014.9 velvet.58212 99.81 True fake: scaffold gap size wrong estimation (local) 38331652 38337725 265144 259060 NC_000014.9 velvet.58212 99.77 True fake: scaffold gap size wrong estimation (local) 38329748 38330816 267836 266768 NC_000014.9 velvet.58212 98.88 True indel: indel (> 5bp) 38327340 38329726 270223 267837 NC_000014.9 velvet.58212 99.25 True fake: not a misassembly (possible transposable element) 36958696 36959580 271108 270224 NC_000014.9 velvet.58212 98.66 True fake: not a misassembly (possible transposable element) 38326068 38327330 272371 271109 NC_000014.9 velvet.58212 99.21 True relocation, inconsistency = 1367384 36956366 36958683 274689 272372 NC_000014.9 velvet.58212 98.02 True fake: scaffold gap size wrong estimation (local) 36955708 36956365 275872 275215 NC_000014.9 velvet.58212 96.5 True fake: scaffold gap size wrong estimation (local) 36952180 36955707 279783 276256 NC_000014.9 velvet.58212 99.6 True relocation, scaffold gap is present, inconsistency = -1373238 38315716 38325336 290123 279865 NC_000014.9 velvet.58212 98.0 True fake: scaffold gap size wrong estimation (local) 38313462 38315424 293157 291195 NC_000014.9 velvet.58212 99.85 True fake: scaffold gap size wrong estimation (local) 38306856 38312664 300560 294584 NC_000014.9 velvet.58212 96.85 True fake: scaffold gap size wrong estimation (local) 38302478 38305008 305998 303430 NC_000014.9 velvet.58212 98.4 True fake: scaffold gap size wrong estimation (local) 38299490 38302455 310049 306958 NC_000014.9 velvet.58212 99.93 True fake: scaffold gap size wrong estimation (local) 38295851 38299231 314635 310886 NC_000014.9 velvet.58212 99.97 True fake: scaffold gap size wrong estimation (local) 38294440 38295579 316725 315586 NC_000014.9 velvet.58212 99.91 True fake: scaffold gap size wrong estimation (local) 38287663 38292985 324235 318913 NC_000014.9 velvet.58212 99.83 True fake: scaffold gap size wrong estimation (local) 38285862 38287415 326675 325122 NC_000014.9 velvet.58212 99.81 True fake: scaffold gap size wrong estimation (local) 38282215 38285660 331182 327440 NC_000014.9 velvet.58212 99.94 True fake: scaffold gap size wrong estimation (local) 38276968 38281250 337127 332845 NC_000014.9 velvet.58212 99.95 True fake: scaffold gap size wrong estimation (local) 38274710 38276684 340047 338073 NC_000014.9 velvet.58212 99.85 True fake: scaffold gap size wrong estimation (local) 38270035 38274545 345322 340818 NC_000014.9 velvet.58212 99.67 True fake: scaffold gap size wrong estimation (local) 38262342 38263222 349474 348594 NC_000014.9 velvet.58212 100.0 True fake: scaffold gap size wrong estimation (local) 38259546 38262280 353094 350360 NC_000014.9 velvet.58212 99.93 True fake: scaffold gap size wrong estimation (local) 38250173 38259263 363318 354150 NC_000014.9 velvet.58212 99.92 True fake: scaffold gap size wrong estimation (local) 38238274 38249939 376749 364228 NC_000014.9 velvet.58212 99.65 True fake: not a misassembly (possible transposable element) 77598922 77601512 379351 376761 NC_000014.9 velvet.58212 99.73 True fake: not a misassembly (possible transposable element) 38203559 38205686 408249 406122 NC_000014.9 velvet.58212 99.86 True fake: scaffold gap size wrong estimation (local) 38197529 38203280 415061 409321 NC_000014.9 velvet.58212 99.74 True relocation, scaffold gap is present, inconsistency = 23988215 62219849 62220523 443415 444089 NC_000014.9 velvet.58212 100.0 True fake: scaffold gap size wrong estimation (local) 62221927 62222517 444100 444690 NC_000014.9 velvet.58212 100.0 True local misassembly 62220584 62221910 444701 446027 NC_000014.9 velvet.58212 100.0 True relocation, scaffold gap is present, inconsistency = 17158552 79380832 79385061 450711 446397 NC_000014.9 velvet.58212 100.0 True relocation, scaffold gap is present, inconsistency = 19715685 59664396 59665136 451462 450722 NC_000014.9 velvet.58212 100.0 True relocation, scaffold gap is present, inconsistency = -8298 59669473 59672618 454683 451538 NC_000014.9 velvet.58212 100.0 True relocation, scaffold gap is present, inconsistency = -17690 59685022 59687152 456824 454694 NC_000014.9 velvet.58212 99.91 True relocation, scaffold gap is present, inconsistency = 21521343 38158295 38163668 462712 456835 NC_000014.9 velvet.58212 99.94 True inversion, scaffold gap is present 38128321 38158114 462723 493490 NC_000014.9 velvet.58212 99.53 True fake: scaffold gap size wrong estimation (local) 38165299 38174325 500231 510016 NC_000014.9 velvet.58212 99.86 True relocation, scaffold gap is present, inconsistency = 41192913 79367254 79370304 513082 510032 NC_000014.9 velvet.58212 100.0 True fake: scaffold gap size wrong estimation (local) 79365746 79366972 515297 514071 NC_000014.9 velvet.58212 100.0 True fake: scaffold gap size wrong estimation (local) 79363602 79365433 517907 516074 NC_000014.9 velvet.58212 99.89 True fake: scaffold gap size wrong estimation (local) 79356976 79358278 520848 519546 NC_000014.9 velvet.58212 100.0 True fake: scaffold gap size wrong estimation (local) 79330096 79331835 542792 541053 NC_000014.9 velvet.58212 99.94 True relocation, scaffold gap is present, inconsistency = -16175 79343911 79346137 545152 542926 NC_000014.9 velvet.58212 100.0 True relocation, scaffold gap is present, inconsistency = 41166126 38174612 38177774 545163 548325 NC_000014.9 velvet.58212 99.97 True fake: scaffold gap size wrong estimation (local) 38178044 38180055 549329 551340 NC_000014.9 velvet.58212 99.95 True fake: scaffold gap size wrong estimation (local) 38180333 38182276 552251 554249 NC_000014.9 velvet.58212 99.9 True fake: scaffold gap size wrong estimation (local) 38182504 38188476 555102 561074 NC_000014.9 velvet.58212 99.92 True fake: scaffold gap size wrong estimation (local) 38188762 38190665 562168 564050 NC_000014.9 velvet.58212 98.73 True fake: scaffold gap size wrong estimation (local) 38216744 38221883 588035 593367 NC_000014.9 velvet.58212 99.9 True fake: scaffold gap size wrong estimation (local) 38224329 38229975 597093 602739 NC_000014.9 velvet.58212 99.96 True fake: scaffold gap size wrong estimation (local) 38230767 38238232 604354 611819 NC_000014.9 velvet.58212 99.95 True fake: scaffold gap size wrong estimation (local) 38267908 38268786 635720 636598 NC_000014.9 velvet.58212 97.84 True relocation, scaffold gap is present, inconsistency = 39327394 77598155 77598680 638573 639098 NC_000014.9 velvet.58212 100.0 True CONTIG velvet.58212 640105 misassembled CONTIG velvet.58215 367 unaligned CONTIG velvet.58242 258 unaligned 92090304 92090965 435 1096 NC_000014.9 velvet.58254 100.0 True CONTIG velvet.58254 1958 correct CONTIG velvet.58255 208 unaligned 57965074 57966768 1695 1 NC_000014.9 velvet.58269 100.0 True fake: scaffold gap size wrong estimation (local) 57958305 57964953 9288 1937 NC_000014.9 velvet.58269 99.97 True fake: scaffold gap size wrong estimation (local) 57957414 57958042 10983 10355 NC_000014.9 velvet.58269 100.0 True fake: scaffold gap size wrong estimation (local) 57947252 57948326 14246 13166 NC_000014.9 velvet.58269 100.0 True local misassembly 57949303 57950247 15292 14348 NC_000014.9 velvet.58269 99.47 True fake: scaffold gap size wrong estimation (local) 57945664 57946303 19649 19010 NC_000014.9 velvet.58269 100.0 True fake: scaffold gap size wrong estimation (local) 57937339 57945435 28700 20656 NC_000014.9 velvet.58269 99.31 True fake: scaffold gap size wrong estimation (local) 57933296 57937063 33533 29766 NC_000014.9 velvet.58269 100.0 True fake: scaffold gap size wrong estimation (local) 57927743 57932580 39912 35075 NC_000014.9 velvet.58269 99.96 True fake: scaffold gap size wrong estimation (local) 57925624 57927477 42869 40976 NC_000014.9 velvet.58269 100.0 True fake: scaffold gap size wrong estimation (local) 57924758 57925467 43918 43240 NC_000014.9 velvet.58269 95.57 True fake: scaffold gap size wrong estimation (local) 57917330 57924434 51572 44457 NC_000014.9 velvet.58269 98.95 True fake: scaffold gap size wrong estimation (local) 57914572 57917130 55111 52553 NC_000014.9 velvet.58269 100.0 True fake: scaffold gap size wrong estimation (local) 57908933 57914277 61693 56302 NC_000014.9 velvet.58269 99.89 True fake: scaffold gap size wrong estimation (local) 57902567 57908038 68825 63274 NC_000014.9 velvet.58269 98.51 True fake: scaffold gap size wrong estimation (local) 57901640 57902277 70156 69519 NC_000014.9 velvet.58269 100.0 True fake: not a misassembly (possible transposable element) 22652931 22655463 73292 70760 NC_000014.9 velvet.58269 99.96 True fake: not a misassembly (possible transposable element) 57891836 57895396 78774 75214 NC_000014.9 velvet.58269 99.97 True fake: scaffold gap size wrong estimation (local) 57877951 57891605 93751 79815 NC_000014.9 velvet.58269 99.71 True fake: scaffold gap size wrong estimation (local) 57869199 57877635 103165 94732 NC_000014.9 velvet.58269 99.92 True relocation, scaffold gap is present, inconsistency = 60345 57808085 57808746 103273 103934 NC_000014.9 velvet.58269 100.0 True relocation, scaffold gap is present, inconsistency = 7654453 50152956 50153621 104610 103945 NC_000014.9 velvet.58269 98.5 True local misassembly 50151865 50152667 105413 104611 NC_000014.9 velvet.58269 99.88 True relocation, scaffold gap is present, inconsistency = 7656138 57808816 57811848 105424 108456 NC_000014.9 velvet.58269 100.0 True CONTIG velvet.58269 108456 misassembled 55361397 55362994 4886 3289 NC_000014.9 velvet.58277 99.94 True CONTIG velvet.58277 4886 correct 73118290 73118767 938 413 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 73117502 73118207 1676 971 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 73115470 73117161 4789 3098 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 73113598 73114445 7268 6421 NC_000014.9 velvet.58296 98.82 True fake: scaffold gap size wrong estimation (local) 73110700 73112766 10735 8669 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 73107129 73109508 15091 12712 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 73105128 73106890 17854 16092 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 73103999 73104577 20226 19648 NC_000014.9 velvet.58296 100.0 True relocation, scaffold gap is present, inconsistency = 20264 73073677 73074341 29620 30284 NC_000014.9 velvet.58296 99.85 True fake: scaffold gap size wrong estimation (local) 73075947 73076883 33576 34512 NC_000014.9 velvet.58296 99.89 True local misassembly 73077061 73078050 34513 35502 NC_000014.9 velvet.58296 98.89 True fake: not a misassembly (possible transposable element) 73081382 73082779 36907 35513 NC_000014.9 velvet.58296 99.71 True fake: not a misassembly (possible transposable element) 73079289 73080238 38807 39755 NC_000014.9 velvet.58296 99.89 True inversion, scaffold gap is present 73078284 73079184 40694 39766 NC_000014.9 velvet.58296 96.77 True fake: scaffold gap size wrong estimation (local) 73072178 73073514 42428 41116 NC_000014.9 velvet.58296 98.19 True fake: scaffold gap size wrong estimation (local) 73071243 73072016 44897 44124 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 73067872 73068737 48738 47824 NC_000014.9 velvet.58296 100.0 True relocation, scaffold gap is present, inconsistency = 17629 73096277 73097209 58649 59581 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 73097502 73098733 59711 60929 NC_000014.9 velvet.58296 98.78 True fake: scaffold gap size wrong estimation (local) 73098887 73101533 62019 64665 NC_000014.9 velvet.58296 100.0 True relocation, scaffold gap is present, inconsistency = -38637064 34464480 34467240 64676 67436 NC_000014.9 velvet.58296 100.0 True relocation, scaffold gap is present, inconsistency = 22392535 56859786 56861261 68922 67447 NC_000014.9 velvet.58296 99.93 True fake: scaffold gap size wrong estimation (local) 56853715 56859053 75800 70462 NC_000014.9 velvet.58296 99.93 True fake: scaffold gap size wrong estimation (local) 56851835 56853425 78415 76795 NC_000014.9 velvet.58296 99.81 True fake: scaffold gap size wrong estimation (local) 56850930 56851598 79384 78716 NC_000014.9 velvet.58296 99.85 True fake: scaffold gap size wrong estimation (local) 56849121 56850653 82024 80492 NC_000014.9 velvet.58296 100.0 True relocation, scaffold gap is present, inconsistency = -16338606 73180253 73181158 89498 88593 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 73178457 73179334 91759 90882 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 73175480 73178006 95241 92715 NC_000014.9 velvet.58296 100.0 True relocation, scaffold gap is present, inconsistency = 16268732 56902123 56906374 99866 95615 NC_000014.9 velvet.58296 99.98 True fake: scaffold gap size wrong estimation (local) 56897611 56901839 106171 100976 NC_000014.9 velvet.58296 98.07 True relocation, scaffold gap is present, inconsistency = -16416404 73311316 73312113 108870 108073 NC_000014.9 velvet.58296 98.75 True local misassembly 73309736 73311076 110211 108871 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 73307997 73309264 112935 111668 NC_000014.9 velvet.58296 99.21 True fake: scaffold gap size wrong estimation (local) 73305032 73307032 116646 114646 NC_000014.9 velvet.58296 99.95 True relocation, scaffold gap is present, inconsistency = 16422984 56876273 56877847 122421 120847 NC_000014.9 velvet.58296 99.94 True fake: scaffold gap size wrong estimation (local) 56873110 56875227 126390 124291 NC_000014.9 velvet.58296 99.1 True fake: scaffold gap size wrong estimation (local) 56867119 56870835 133007 129185 NC_000014.9 velvet.58296 96.97 True fake: scaffold gap size wrong estimation (local) 56836538 56837393 160916 160061 NC_000014.9 velvet.58296 99.77 True fake: scaffold gap size wrong estimation (local) 56834402 56836233 163993 162162 NC_000014.9 velvet.58296 99.95 True fake: scaffold gap size wrong estimation (local) 56809615 56825740 187150 170309 NC_000014.9 velvet.58296 99.94 True relocation, scaffold gap is present, inconsistency = 36540946 20267629 20268658 187161 188190 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 20269755 20272040 190343 192628 NC_000014.9 velvet.58296 99.69 True fake: scaffold gap size wrong estimation (local) 20273345 20273882 194181 194726 NC_000014.9 velvet.58296 99.81 True fake: scaffold gap size wrong estimation (local) 20307661 20309321 224053 225713 NC_000014.9 velvet.58296 99.82 True fake: scaffold gap size wrong estimation (local) 20311498 20314835 228412 231838 NC_000014.9 velvet.58296 99.91 True fake: scaffold gap size wrong estimation (local) 20315174 20316881 232889 234644 NC_000014.9 velvet.58296 99.88 True fake: scaffold gap size wrong estimation (local) 20317415 20318217 235167 235969 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 20319052 20320581 237656 239185 NC_000014.9 velvet.58296 99.35 True fake: scaffold gap size wrong estimation (local) 20321682 20322637 241075 242030 NC_000014.9 velvet.58296 100.0 True relocation, scaffold gap is present, inconsistency = 36460445 56784766 56785360 244308 243714 NC_000014.9 velvet.58296 99.83 True relocation, scaffold gap is present, inconsistency = 29331138 27441177 27443776 256825 254160 NC_000014.9 velvet.58296 98.49 True fake: scaffold gap size wrong estimation (local) 27434487 27441090 265145 257633 NC_000014.9 velvet.58296 99.5 True relocation, scaffold gap is present, inconsistency = -29349447 56783396 56783923 265683 265156 NC_000014.9 velvet.58296 97.73 True fake: scaffold gap size wrong estimation (local) 56780199 56781027 269633 268805 NC_000014.9 velvet.58296 100.0 True relocation, scaffold gap is present, inconsistency = 36448081 20325444 20330636 271115 276368 NC_000014.9 velvet.58296 99.96 True fake: scaffold gap size wrong estimation (local) 20330884 20332025 277130 278271 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 20332191 20334188 278848 280845 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 20334377 20335432 281458 282512 NC_000014.9 velvet.58296 99.91 True relocation, scaffold gap is present, inconsistency = 36428340 56763783 56766330 285072 282523 NC_000014.9 velvet.58296 99.96 True fake: scaffold gap size wrong estimation (extensive) 56750956 56752674 290338 288620 NC_000014.9 velvet.58296 99.88 True fake: scaffold gap size wrong estimation (local) 56749475 56750670 292375 291191 NC_000014.9 velvet.58296 99.07 True relocation, scaffold gap is present, inconsistency = 36402640 20344794 20346344 292866 294416 NC_000014.9 velvet.58296 100.0 True relocation, scaffold gap is present, inconsistency = 57610938 77960611 77962161 297745 299294 NC_000014.9 velvet.58296 99.81 True fake: scaffold gap size wrong estimation (local) 77962385 77963935 300317 301867 NC_000014.9 velvet.58296 99.87 True fake: scaffold gap size wrong estimation (local) 77964598 77966522 302949 304873 NC_000014.9 velvet.58296 99.95 True relocation, scaffold gap is present, inconsistency = -34327 77932346 77936846 305024 309524 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 77937182 77937919 310562 311299 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 77942838 77943648 311310 312166 NC_000014.9 velvet.58296 99.49 True relocation, scaffold gap is present, inconsistency = 59892 77877202 77882935 318139 312177 NC_000014.9 velvet.58296 99.81 True fake: scaffold gap size wrong estimation (local) 77875469 77876914 320539 319094 NC_000014.9 velvet.58296 98.48 True fake: scaffold gap size wrong estimation (local) 77873021 77875468 323216 320769 NC_000014.9 velvet.58296 99.43 True local misassembly 77865448 77869422 327191 323217 NC_000014.9 velvet.58296 99.82 True fake: scaffold gap size wrong estimation (local) 77863766 77865162 329378 327936 NC_000014.9 velvet.58296 100.0 True relocation, scaffold gap is present, inconsistency = 57511028 20351479 20352599 329517 330630 NC_000014.9 velvet.58296 99.11 True fake: not a misassembly (possible transposable element) 77943660 77946725 330641 333706 NC_000014.9 velvet.58296 99.8 True fake: not a misassembly (possible transposable element) 20354577 20358485 333717 337625 NC_000014.9 velvet.58296 99.97 True relocation, scaffold gap is present, inconsistency = 58897679 79256175 79257335 338796 337636 NC_000014.9 velvet.58296 99.91 True indel: indel (<= 5bp) 79254815 79256172 340154 338797 NC_000014.9 velvet.58296 99.41 True local misassembly 79253847 79254814 341641 340674 NC_000014.9 velvet.58296 98.86 True relocation, scaffold gap is present, inconsistency = 58892211 20358570 20359718 343559 344707 NC_000014.9 velvet.58296 99.91 True fake: scaffold gap size wrong estimation (local) 20362892 20363974 344752 345818 NC_000014.9 velvet.58296 98.51 True fake: scaffold gap size wrong estimation (local) 20364731 20365274 346768 347311 NC_000014.9 velvet.58296 100.0 True local misassembly 20361624 20362451 347322 348149 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 20365578 20367166 348160 349748 NC_000014.9 velvet.58296 99.94 True relocation, scaffold gap is present, inconsistency = 57480319 77847496 77848537 350800 349759 NC_000014.9 velvet.58296 99.71 True fake: scaffold gap size wrong estimation (local) 77839924 77840554 352461 351831 NC_000014.9 velvet.58296 99.84 True relocation, scaffold gap is present, inconsistency = 3277587 81121191 81121709 355511 356029 NC_000014.9 velvet.58296 99.42 True fake: not a misassembly (possible transposable element) 72074313 72078282 380237 376208 NC_000014.9 velvet.58296 97.59 True fake: not a misassembly (possible transposable element) 81152056 81154056 383309 385346 NC_000014.9 velvet.58296 97.51 True fake: scaffold gap size wrong estimation (extensive) 81163992 81164702 385948 386658 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 81164960 81165813 387472 388325 NC_000014.9 velvet.58296 99.88 True fake: not a misassembly (possible transposable element) 81156516 81157948 388338 389768 NC_000014.9 velvet.58296 99.72 True fake: not a misassembly (possible transposable element) 81165842 81166995 389771 390924 NC_000014.9 velvet.58296 99.31 True relocation, scaffold gap is present, inconsistency = -11013 81160906 81163972 395848 398912 NC_000014.9 velvet.58296 99.87 True local misassembly 81159698 81160709 398923 399927 NC_000014.9 velvet.58296 99.31 True fake: scaffold gap size wrong estimation (local) 81167660 81174412 399938 406690 NC_000014.9 velvet.58296 99.9 True fake: scaffold gap size wrong estimation (local) 81193456 81194892 424677 426113 NC_000014.9 velvet.58296 99.86 True fake: scaffold gap size wrong estimation (local) 81195663 81198202 427742 430281 NC_000014.9 velvet.58296 99.92 True fake: scaffold gap size wrong estimation (local) 81198428 81200452 431309 433360 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 81200916 81201937 435354 436375 NC_000014.9 velvet.58296 99.8 True fake: scaffold gap size wrong estimation (local) 81210844 81213859 439333 442432 NC_000014.9 velvet.58296 99.87 True local misassembly 81209485 81210016 442443 442974 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 81214677 81215809 444601 445728 NC_000014.9 velvet.58296 99.56 True fake: scaffold gap size wrong estimation (local) 81215905 81217692 446278 448457 NC_000014.9 velvet.58296 99.94 True fake: scaffold gap size wrong estimation (local) 81229119 81235956 463008 469845 NC_000014.9 velvet.58296 99.96 True fake: scaffold gap size wrong estimation (local) 81238143 81239242 472728 473827 NC_000014.9 velvet.58296 98.91 True fake: scaffold gap size wrong estimation (local) 81239918 81240673 475477 476232 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 81240925 81241424 476527 477026 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 81242072 81242719 478285 478932 NC_000014.9 velvet.58296 99.69 True fake: scaffold gap size wrong estimation (local) 81242976 81243936 481941 482901 NC_000014.9 velvet.58296 99.69 True fake: scaffold gap size wrong estimation (local) 81245466 81248472 485399 488404 NC_000014.9 velvet.58296 99.83 True fake: not a misassembly (possible transposable element) 94651398 94653688 490883 488561 NC_000014.9 velvet.58296 99.21 True fake: not a misassembly (possible transposable element) 81251238 81251853 491215 491830 NC_000014.9 velvet.58296 99.84 True relocation, scaffold gap is present, inconsistency = -60829683 20422631 20423275 492291 492935 NC_000014.9 velvet.58296 99.84 True relocation, scaffold gap is present, inconsistency = 74224426 94647712 94650649 495974 492946 NC_000014.9 velvet.58296 99.82 True fake: scaffold gap size wrong estimation (local) 94640453 94647619 504069 496903 NC_000014.9 velvet.58296 99.99 True fake: scaffold gap size wrong estimation (local) 94638518 94640162 506800 505156 NC_000014.9 velvet.58296 99.94 True fake: scaffold gap size wrong estimation (local) 94609430 94610013 532568 531985 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 94604519 94606145 534205 532579 NC_000014.9 velvet.58296 99.94 True relocation, scaffold gap is present, inconsistency = 74154735 20445094 20449773 534216 539112 NC_000014.9 velvet.58296 99.85 True relocation, scaffold gap is present, inconsistency = -15318 20435555 20436854 540212 541470 NC_000014.9 velvet.58296 96.51 True fake: scaffold gap size wrong estimation (local) 20436946 20439713 542284 545138 NC_000014.9 velvet.58296 99.42 True fake: scaffold gap size wrong estimation (local) 20439901 20443222 546099 549420 NC_000014.9 velvet.58296 99.91 True fake: scaffold gap size wrong estimation (local) 20443812 20445033 550548 551745 NC_000014.9 velvet.58296 98.02 True relocation, scaffold gap is present, inconsistency = 74152899 94598409 94601029 554842 552222 NC_000014.9 velvet.58296 99.5 True fake: scaffold gap size wrong estimation (local) 94597017 94598408 557819 556428 NC_000014.9 velvet.58296 99.93 True indel: indel (<= 5bp) 94595236 94597012 559596 557820 NC_000014.9 velvet.58296 98.87 True fake: scaffold gap size wrong estimation (local) 94591584 94594645 564317 561256 NC_000014.9 velvet.58296 99.54 True relocation, scaffold gap is present, inconsistency = 74123875 20463962 20465897 566129 568061 NC_000014.9 velvet.58296 99.85 True fake: scaffold gap size wrong estimation (local) 20466527 20468309 569553 571269 NC_000014.9 velvet.58296 96.28 True fake: scaffold gap size wrong estimation (local) 20468550 20471044 572335 574829 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 20471470 20473153 575878 577561 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 20473738 20475543 578697 580502 NC_000014.9 velvet.58296 96.51 True fake: scaffold gap size wrong estimation (local) 20475703 20480343 581506 586140 NC_000014.9 velvet.58296 98.38 True fake: scaffold gap size wrong estimation (local) 20480506 20484336 586915 590943 NC_000014.9 velvet.58296 96.98 True fake: scaffold gap size wrong estimation (local) 20484552 20485077 591589 592114 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 20485657 20487938 593184 595432 NC_000014.9 velvet.58296 98.46 True fake: scaffold gap size wrong estimation (local) 20488138 20491184 596196 599537 NC_000014.9 velvet.58296 96.37 True fake: scaffold gap size wrong estimation (local) 20507847 20509938 611854 613932 NC_000014.9 velvet.58296 97.67 True fake: scaffold gap size wrong estimation (local) 20510030 20514085 614819 618930 NC_000014.9 velvet.58296 99.9 True fake: scaffold gap size wrong estimation (local) 20514682 20515641 619803 620762 NC_000014.9 velvet.58296 99.79 True fake: scaffold gap size wrong estimation (local) 20515818 20518228 621772 624182 NC_000014.9 velvet.58296 99.88 True fake: scaffold gap size wrong estimation (local) 20549723 20553960 653757 658873 NC_000014.9 velvet.58296 99.64 True relocation, scaffold gap is present, inconsistency = 14114768 34672201 34672891 662346 663036 NC_000014.9 velvet.58296 99.71 True local misassembly 34673171 34674109 663037 663975 NC_000014.9 velvet.58296 98.94 True fake: scaffold gap size wrong estimation (local) 34676648 34677335 667218 667905 NC_000014.9 velvet.58296 98.55 True relocation, scaffold gap is present, inconsistency = -14185873 20491473 20492788 667916 669231 NC_000014.9 velvet.58296 99.47 True fake: scaffold gap size wrong estimation (local) 20493106 20494159 669745 670798 NC_000014.9 velvet.58296 99.91 True fake: scaffold gap size wrong estimation (local) 20498592 20500637 670809 672854 NC_000014.9 velvet.58296 99.95 True relocation, scaffold gap is present, inconsistency = 74031552 94533257 94540839 682131 673922 NC_000014.9 velvet.58296 99.92 True relocation, scaffold gap is present, inconsistency = 13028300 81500509 81503064 686579 684024 NC_000014.9 velvet.58296 99.96 True relocation, scaffold gap is present, inconsistency = -8767 81503453 81508462 693199 687393 NC_000014.9 velvet.58296 99.98 True relocation, scaffold gap is present, inconsistency = 48526083 32975913 32977359 693210 694658 NC_000014.9 velvet.58296 99.79 True relocation, scaffold gap is present, inconsistency = 61541906 94520270 94526079 701472 695663 NC_000014.9 velvet.58296 99.97 True fake: scaffold gap size wrong estimation (local) 94512089 94519673 710624 703059 NC_000014.9 velvet.58296 99.64 True fake: scaffold gap size wrong estimation (local) 94510909 94511835 712309 711384 NC_000014.9 velvet.58296 99.57 True fake: scaffold gap size wrong estimation (local) 94509277 94510480 714424 713221 NC_000014.9 velvet.58296 97.84 True fake: scaffold gap size wrong estimation (local) 94508398 94509276 715374 714496 NC_000014.9 velvet.58296 100.0 True indel: indel (> 5bp) 94502020 94508388 721743 715375 NC_000014.9 velvet.58296 99.83 True fake: scaffold gap size wrong estimation (extensive) 94495342 94502019 738177 731500 NC_000014.9 velvet.58296 99.96 True fake: scaffold gap size wrong estimation (local) 94489267 94495055 745029 739241 NC_000014.9 velvet.58296 99.97 True fake: not a misassembly (possible transposable element) 32941326 32943675 747389 745040 NC_000014.9 velvet.58296 99.96 True fake: not a misassembly (possible transposable element) 94483557 94488814 752951 747400 NC_000014.9 velvet.58296 99.94 True relocation, scaffold gap is present, inconsistency = 15513141 78968088 78969835 753532 755279 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 78979990 78983276 762615 765901 NC_000014.9 velvet.58296 100.0 True relocation, scaffold gap is present, inconsistency = 15482529 94465816 94473271 765912 773078 NC_000014.9 velvet.58296 95.91 True fake: scaffold gap size wrong estimation (local) 94473542 94482235 774166 783876 NC_000014.9 velvet.58296 99.83 True relocation, scaffold gap is present, inconsistency = -15480083 79008932 79011360 790656 793084 NC_000014.9 velvet.58296 100.0 True fake: scaffold gap size wrong estimation (local) 79011458 79018007 793489 800262 NC_000014.9 velvet.58296 96.5 True fake: scaffold gap size wrong estimation (local) 79023666 79029860 801102 807267 NC_000014.9 velvet.58296 99.15 True relocation, scaffold gap is present, inconsistency = 53969663 25036857 25039692 824413 821578 NC_000014.9 velvet.58296 100.0 True relocation, scaffold gap is present, inconsistency = 53998903 79039979 79040649 825797 826467 NC_000014.9 velvet.58296 99.85 True fake: scaffold gap size wrong estimation (local) 79044858 79048634 828151 831981 NC_000014.9 velvet.58296 99.81 True fake: scaffold gap size wrong estimation (local) 79049099 79054017 833114 838030 NC_000014.9 velvet.58296 99.92 True fake: scaffold gap size wrong estimation (local) 79054314 79058964 839116 843766 NC_000014.9 velvet.58296 99.78 True CONTIG velvet.58296 843766 misassembled 82466809 82467687 4718 3837 NC_000014.9 velvet.58318 99.89 True CONTIG velvet.58318 7768 correct_unaligned 20238594 20239438 1 845 NC_000014.9 velvet.58328 99.64 True fake: scaffold gap size wrong estimation (local) 20239703 20240578 2406 3281 NC_000014.9 velvet.58328 100.0 True fake: scaffold gap size wrong estimation (local) 20240815 20241591 3466 4217 NC_000014.9 velvet.58328 96.35 True fake: scaffold gap size wrong estimation (local) 20242571 20244482 6112 8023 NC_000014.9 velvet.58328 100.0 True fake: scaffold gap size wrong estimation (local) 20244919 20248232 9291 12646 NC_000014.9 velvet.58328 100.0 True fake: scaffold gap size wrong estimation (local) 20250307 20251088 15361 16142 NC_000014.9 velvet.58328 100.0 True fake: scaffold gap size wrong estimation (local) 20251200 20253253 16822 18875 NC_000014.9 velvet.58328 99.95 True fake: scaffold gap size wrong estimation (local) 20253536 20254417 19491 20372 NC_000014.9 velvet.58328 99.89 True fake: scaffold gap size wrong estimation (local) 20254682 20257908 21212 24546 NC_000014.9 velvet.58328 99.78 True fake: scaffold gap size wrong estimation (local) 20263621 20264669 26747 27824 NC_000014.9 velvet.58328 97.22 True fake: scaffold gap size wrong estimation (local) 20291332 20296759 52814 58329 NC_000014.9 velvet.58328 99.89 True relocation, scaffold gap is present, inconsistency = -39923 20259106 20261052 60599 62585 NC_000014.9 velvet.58328 99.89 True fake: scaffold gap size wrong estimation (local) 20261392 20263586 63631 65825 NC_000014.9 velvet.58328 99.91 True fake: scaffold gap size wrong estimation (local) 20286198 20288459 89181 91415 NC_000014.9 velvet.58328 98.62 True fake: scaffold gap size wrong estimation (local) 20288694 20291073 93345 95724 NC_000014.9 velvet.58328 99.83 True relocation, scaffold gap is present, inconsistency = -18452 20274268 20276401 97371 99503 NC_000014.9 velvet.58328 99.81 True fake: scaffold gap size wrong estimation (local) 20276533 20279254 100388 103109 NC_000014.9 velvet.58328 99.89 True relocation, scaffold gap is present, inconsistency = 36511861 56792479 56800263 112319 104473 NC_000014.9 velvet.58328 99.91 True fake: scaffold gap size wrong estimation (local) 56789470 56792195 116178 113395 NC_000014.9 velvet.58328 99.89 True fake: scaffold gap size wrong estimation (local) 56785584 56789354 120842 117072 NC_000014.9 velvet.58328 99.95 True relocation, scaffold gap is present, inconsistency = 36485894 20297804 20299598 120934 122728 NC_000014.9 velvet.58328 99.72 True fake: scaffold gap size wrong estimation (local) 20300281 20303036 124220 127034 NC_000014.9 velvet.58328 99.93 True relocation, scaffold gap is present, inconsistency = 51718184 72022094 72026153 127908 132559 NC_000014.9 velvet.58328 99.85 True fake: scaffold gap size wrong estimation (local) 72026424 72033375 133619 140669 NC_000014.9 velvet.58328 99.96 True fake: scaffold gap size wrong estimation (local) 72034436 72037129 142455 145233 NC_000014.9 velvet.58328 99.92 True relocation, scaffold gap is present, inconsistency = 9091765 81157943 81158636 174976 174282 NC_000014.9 velvet.58328 99.71 True relocation, scaffold gap is present, inconsistency = 50626244 30525862 30530064 176611 180813 NC_000014.9 velvet.58328 99.98 True relocation, scaffold gap is present, inconsistency = 41539760 72069835 72072326 180824 183315 NC_000014.9 velvet.58328 99.8 True relocation, scaffold gap is present, inconsistency = 15320613 56745007 56749211 187530 183326 NC_000014.9 velvet.58328 99.86 True relocation, scaffold gap is present, inconsistency = 8570831 65320489 65322424 187977 189912 NC_000014.9 velvet.58328 99.95 True relocation, scaffold gap is present, inconsistency = 20380254 44938641 44940224 191506 189923 NC_000014.9 velvet.58328 100.0 True relocation, scaffold gap is present, inconsistency = 3796156 41140914 41142474 191517 193077 NC_000014.9 velvet.58328 100.0 True relocation, scaffold gap is present, inconsistency = 30894761 72037246 72038024 193088 193865 NC_000014.9 velvet.58328 99.49 True fake: scaffold gap size wrong estimation (local) 72038259 72042140 194389 198322 NC_000014.9 velvet.58328 99.9 True fake: scaffold gap size wrong estimation (local) 72072603 72074331 227637 229365 NC_000014.9 velvet.58328 99.94 True relocation, scaffold gap is present, inconsistency = 43614 72016632 72017768 241722 240586 NC_000014.9 velvet.58328 99.91 True fake: scaffold gap size wrong estimation (local) 72013366 72016405 245532 242490 NC_000014.9 velvet.58328 99.97 True fake: scaffold gap size wrong estimation (local) 72011629 72012987 247911 246553 NC_000014.9 velvet.58328 99.78 True CONTIG velvet.58328 247911 misassembled 102220722 102224059 1 3370 NC_000014.9 velvet.58400 99.02 True fake: scaffold gap size wrong estimation (local) 102224343 102228441 3826 8834 NC_000014.9 velvet.58400 100.0 True fake: scaffold gap size wrong estimation (local) 102228728 102239677 9696 21247 NC_000014.9 velvet.58400 99.96 True fake: scaffold gap size wrong estimation (local) 102241589 102242180 23980 24571 NC_000014.9 velvet.58400 96.62 True fake: scaffold gap size wrong estimation (local) 102267586 102268652 46051 47109 NC_000014.9 velvet.58400 99.24 True fake: scaffold gap size wrong estimation (local) 102269777 102270357 49393 49973 NC_000014.9 velvet.58400 100.0 True relocation, scaffold gap is present, inconsistency = 72317568 29947365 29951545 54817 50637 NC_000014.9 velvet.58400 99.95 True fake: scaffold gap size wrong estimation (local) 29946182 29947112 56394 55464 NC_000014.9 velvet.58400 100.0 True fake: scaffold gap size wrong estimation (local) 29938519 29945918 65095 57192 NC_000014.9 velvet.58400 99.6 True relocation, scaffold gap is present, inconsistency = -13414445 43341830 43342746 76229 75313 NC_000014.9 velvet.58400 100.0 True relocation, scaffold gap is present, inconsistency = 4929105 48274903 48278519 79281 82847 NC_000014.9 velvet.58400 98.45 True fake: scaffold gap size wrong estimation (local) 48278869 48279917 83902 84950 NC_000014.9 velvet.58400 100.0 True relocation, scaffold gap is present, inconsistency = -7526383 40756392 40759028 87808 90444 NC_000014.9 velvet.58400 99.89 True fake: scaffold gap size wrong estimation (local) 40759236 40761393 91438 93595 NC_000014.9 velvet.58400 99.86 True fake: scaffold gap size wrong estimation (local) 40761675 40772287 94591 105207 NC_000014.9 velvet.58400 99.95 True fake: scaffold gap size wrong estimation (local) 40772480 40773838 105967 107325 NC_000014.9 velvet.58400 99.85 True fake: not a misassembly (possible transposable element) 29902860 29906282 110758 107336 NC_000014.9 velvet.58400 100.0 True fake: not a misassembly (possible transposable element) 40773870 40775997 110769 112896 NC_000014.9 velvet.58400 99.91 True fake: scaffold gap size wrong estimation (local) 40782002 40784115 113361 115474 NC_000014.9 velvet.58400 100.0 True relocation, scaffold gap is present, inconsistency = 10879426 29900773 29902137 117277 115913 NC_000014.9 velvet.58400 99.85 True relocation, inconsistency = 10874322 40776465 40777311 117283 118129 NC_000014.9 velvet.58400 98.47 True fake: scaffold gap size wrong estimation (local) 40777493 40781168 118886 122560 NC_000014.9 velvet.58400 99.92 True fake: scaffold gap size wrong estimation (local) 40781269 40781893 122712 123336 NC_000014.9 velvet.58400 99.84 True relocation, scaffold gap is present, inconsistency = 64327 40846231 40847247 124363 123347 NC_000014.9 velvet.58400 99.61 True fake: scaffold gap size wrong estimation (local) 40844589 40845765 126264 125088 NC_000014.9 velvet.58400 99.83 True fake: scaffold gap size wrong estimation (local) 40840129 40844029 131996 127490 NC_000014.9 velvet.58400 99.87 True fake: scaffold gap size wrong estimation (local) 40838736 40839852 133949 132833 NC_000014.9 velvet.58400 99.02 True fake: scaffold gap size wrong estimation (local) 40837747 40838512 135138 134373 NC_000014.9 velvet.58400 97.39 True fake: scaffold gap size wrong estimation (local) 40836412 40837746 137025 135691 NC_000014.9 velvet.58400 99.18 True local misassembly 40832743 40833456 137739 137026 NC_000014.9 velvet.58400 99.86 True indel: indel (<= 5bp) 40831180 40832742 139306 137744 NC_000014.9 velvet.58400 97.95 True fake: scaffold gap size wrong estimation (local) 40830476 40831179 140930 140227 NC_000014.9 velvet.58400 100.0 True indel: indel (<= 5bp) 40829634 40830475 141774 140933 NC_000014.9 velvet.58400 99.88 True relocation, scaffold gap is present, inconsistency = 2204848 38621148 38622070 144490 145406 NC_000014.9 velvet.58400 97.83 True inversion, scaffold gap is present 38629134 38631095 148100 146175 NC_000014.9 velvet.58400 97.59 True relocation, scaffold gap is present, inconsistency = 8768895 29855973 29859224 149115 152366 NC_000014.9 velvet.58400 99.91 True fake: scaffold gap size wrong estimation (local) 29859639 29861692 153512 155565 NC_000014.9 velvet.58400 99.9 True relocation, scaffold gap is present, inconsistency = -20884 29841701 29849313 156458 164070 NC_000014.9 velvet.58400 99.97 True local misassembly 29851926 29853724 164071 165869 NC_000014.9 velvet.58400 99.44 True fake: scaffold gap size wrong estimation (local) 29861941 29862442 170033 170534 NC_000014.9 velvet.58400 99.6 True fake: scaffold gap size wrong estimation (local) 29862893 29869183 171000 177290 NC_000014.9 velvet.58400 100.0 True fake: scaffold gap size wrong estimation (local) 29869310 29872412 178156 181306 NC_000014.9 velvet.58400 99.93 True relocation, scaffold gap is present, inconsistency = 10928986 40802648 40807259 187170 182556 NC_000014.9 velvet.58400 99.72 True relocation, scaffold gap is present, inconsistency = -29346 40827183 40828620 191998 190544 NC_000014.9 velvet.58400 97.34 True fake: scaffold gap size wrong estimation (local) 40826509 40827151 193339 192697 NC_000014.9 velvet.58400 99.84 True fake: scaffold gap size wrong estimation (local) 40818977 40824967 202500 195687 NC_000014.9 velvet.58400 99.87 True fake: scaffold gap size wrong estimation (local) 40813306 40818023 208862 204145 NC_000014.9 velvet.58400 99.85 True fake: scaffold gap size wrong estimation (local) 40807726 40813194 215233 209759 NC_000014.9 velvet.58400 99.87 True inversion, scaffold gap is present 40784445 40798531 222767 238431 NC_000014.9 velvet.58400 99.76 True fake: scaffold gap size wrong estimation (local) 40798621 40800163 238531 240072 NC_000014.9 velvet.58400 99.87 True relocation, scaffold gap is present, inconsistency = 10906187 29889872 29892423 242696 240083 NC_000014.9 velvet.58400 100.0 True fake: scaffold gap size wrong estimation (local) 29885880 29889450 247684 243555 NC_000014.9 velvet.58400 99.78 True fake: scaffold gap size wrong estimation (local) 29885064 29885733 248711 248044 NC_000014.9 velvet.58400 99.55 True fake: scaffold gap size wrong estimation (local) 29883235 29884837 251174 249572 NC_000014.9 velvet.58400 100.0 True fake: scaffold gap size wrong estimation (local) 29878329 29879476 257800 256653 NC_000014.9 velvet.58400 98.69 True local misassembly 29877084 29877768 259098 258414 NC_000014.9 velvet.58400 100.0 True fake: scaffold gap size wrong estimation (local) 29873369 29876701 263609 260271 NC_000014.9 velvet.58400 99.94 True CONTIG velvet.58400 263609 misassembled CONTIG velvet.58473 214 unaligned 106874810 106875362 1505 953 NC_000014.9 velvet.58477 99.46 True fake: scaffold gap size wrong estimation (local) 106872724 106874794 4206 2194 NC_000014.9 velvet.58477 96.88 True fake: scaffold gap size wrong estimation (local) 106869739 106870421 8607 7925 NC_000014.9 velvet.58477 100.0 True fake: scaffold gap size wrong estimation (local) 106865500 106866251 13299 12548 NC_000014.9 velvet.58477 100.0 True fake: not a misassembly (possible transposable element) 106836694 106838180 16202 14716 NC_000014.9 velvet.58477 100.0 True fake: not a misassembly (possible transposable element) 106859250 106863338 23164 19133 NC_000014.9 velvet.58477 98.5 True fake: scaffold gap size wrong estimation (local) 106819820 106829883 61767 50963 NC_000014.9 velvet.58477 97.05 True fake: scaffold gap size wrong estimation (local) 106813844 106818622 68733 63955 NC_000014.9 velvet.58477 99.92 True fake: scaffold gap size wrong estimation (local) 106811004 106813753 71868 69119 NC_000014.9 velvet.58477 99.89 True relocation, scaffold gap is present, inconsistency = 254816 106554739 106556177 71879 73300 NC_000014.9 velvet.58477 98.53 True fake: not a misassembly (possible transposable element) 106664869 106665601 73743 74475 NC_000014.9 velvet.58477 100.0 True fake: not a misassembly (possible transposable element) 106557497 106558068 76860 77431 NC_000014.9 velvet.58477 99.65 True fake: scaffold gap size wrong estimation (local) 106558111 106561896 77484 81260 NC_000014.9 velvet.58477 97.94 True fake: scaffold gap size wrong estimation (local) 106562183 106563778 82344 83909 NC_000014.9 velvet.58477 97.1 True relocation, scaffold gap is present, inconsistency = 7364 106571153 106573372 86139 83920 NC_000014.9 velvet.58477 100.0 True relocation, scaffold gap is present, inconsistency = 17423 106548885 106550024 90984 89845 NC_000014.9 velvet.58477 99.65 True fake: not a misassembly (possible transposable element) 106547051 106548140 91676 92765 NC_000014.9 velvet.58477 99.72 True fake: not a misassembly (possible transposable element) 106546395 106546964 94324 93755 NC_000014.9 velvet.58477 99.82 True fake: scaffold gap size wrong estimation (local) 106544069 106545554 97676 96191 NC_000014.9 velvet.58477 99.8 True inversion, scaffold gap is present 106551252 106552600 97976 99332 NC_000014.9 velvet.58477 99.85 True relocation, scaffold gap is present, inconsistency = 294385 106846996 106849139 99343 101486 NC_000014.9 velvet.58477 99.95 True fake: not a misassembly (possible transposable element) 106853535 106855886 103856 101497 NC_000014.9 velvet.58477 100.0 True fake: not a misassembly (possible transposable element) 106850253 106853548 104425 108471 NC_000014.9 velvet.58477 97.29 True relocation, scaffold gap is present, inconsistency = -15327 106838232 106846932 108482 117073 NC_000014.9 velvet.58477 98.63 True fake: scaffold gap size wrong estimation (local) 106849145 106850232 119528 120615 NC_000014.9 velvet.58477 100.0 True relocation, scaffold gap is present, inconsistency = -274390 106575858 106586606 120631 131435 NC_000014.9 velvet.58477 99.75 True fake: scaffold gap size wrong estimation (local) 106586718 106588434 131591 133307 NC_000014.9 velvet.58477 100.0 True relocation, scaffold gap is present, inconsistency = 276075 106875409 106878971 144207 147651 NC_000014.9 velvet.58477 95.18 True fake: scaffold gap size wrong estimation (local) 106880716 106881363 150535 151182 NC_000014.9 velvet.58477 100.0 True relocation, scaffold gap is present, inconsistency = -276746 106608425 106610418 154990 156983 NC_000014.9 velvet.58477 99.95 True local misassembly 106607533 106608246 156994 157707 NC_000014.9 velvet.58477 100.0 True fake: scaffold gap size wrong estimation (local) 106611343 106616175 162471 167561 NC_000014.9 velvet.58477 99.9 True fake: scaffold gap size wrong estimation (local) 106616907 106618181 168814 170088 NC_000014.9 velvet.58477 99.61 True fake: scaffold gap size wrong estimation (local) 106642193 106642874 193413 194094 NC_000014.9 velvet.58477 98.53 True relocation, scaffold gap is present, inconsistency = -318861 106327191 106328756 197272 198837 NC_000014.9 velvet.58477 99.55 True relocation, scaffold gap is present, inconsistency = 24858 106353625 106354671 199895 198848 NC_000014.9 velvet.58477 99.05 True inversion, scaffold gap is present 106355677 106356397 201459 202193 NC_000014.9 velvet.58477 99.84 True fake: scaffold gap size wrong estimation (local) 106358492 106359650 204628 205786 NC_000014.9 velvet.58477 99.22 True fake: scaffold gap size wrong estimation (local) 106364226 106365045 214106 214925 NC_000014.9 velvet.58477 99.02 True fake: scaffold gap size wrong estimation (local) 106368584 106369117 222520 223053 NC_000014.9 velvet.58477 99.81 True fake: scaffold gap size wrong estimation (local) 106371744 106372348 226361 226965 NC_000014.9 velvet.58477 99.83 True fake: scaffold gap size wrong estimation (local) 106374696 106375579 229964 230820 NC_000014.9 velvet.58477 96.91 True fake: scaffold gap size wrong estimation (local) 106375986 106376923 231012 231920 NC_000014.9 velvet.58477 96.74 True fake: scaffold gap size wrong estimation (local) 106378014 106378558 233549 234136 NC_000014.9 velvet.58477 99.79 True fake: scaffold gap size wrong estimation (local) 106378559 106380467 235072 236958 NC_000014.9 velvet.58477 98.68 True fake: scaffold gap size wrong estimation (extensive) 106389787 106390637 237355 238205 NC_000014.9 velvet.58477 99.88 True relocation, scaffold gap is present, inconsistency = -10722 106383217 106384287 241507 242578 NC_000014.9 velvet.58477 99.91 True fake: scaffold gap size wrong estimation (extensive) 106408650 106409172 259765 260287 NC_000014.9 velvet.58477 99.43 True fake: scaffold gap size wrong estimation (local) 106412244 106414175 264671 266602 NC_000014.9 velvet.58477 99.95 True fake: scaffold gap size wrong estimation (local) 106417149 106419134 270832 272817 NC_000014.9 velvet.58477 99.6 True fake: scaffold gap size wrong estimation (local) 106419225 106419844 276121 276740 NC_000014.9 velvet.58477 100.0 True relocation, scaffold gap is present, inconsistency = 36563 106457567 106458090 277900 278423 NC_000014.9 velvet.58477 99.81 True inversion, scaffold gap is present 106455336 106457179 281287 278694 NC_000014.9 velvet.58477 99.95 True relocation, scaffold gap is present, inconsistency = 239944 106214684 106215282 281397 281995 NC_000014.9 velvet.58477 99.83 True relocation, scaffold gap is present, inconsistency = 69396 106284689 106285940 283266 282006 NC_000014.9 velvet.58477 100.0 True fake: scaffold gap size wrong estimation (local) 106283102 106283808 286033 285327 NC_000014.9 velvet.58477 99.86 True relocation, scaffold gap is present, inconsistency = 7697 106248074 106250043 311395 313364 NC_000014.9 velvet.58477 99.54 True fake: scaffold gap size wrong estimation (local) 106250411 106252043 314477 316090 NC_000014.9 velvet.58477 97.84 True fake: scaffold gap size wrong estimation (local) 106254428 106255264 319750 320586 NC_000014.9 velvet.58477 99.88 True local misassembly 106255480 106256381 320587 321488 NC_000014.9 velvet.58477 98.67 True relocation, scaffold gap is present, inconsistency = 165157 106424670 106425280 325230 324620 NC_000014.9 velvet.58477 99.67 True inversion, scaffold gap is present 106419917 106421061 325335 326479 NC_000014.9 velvet.58477 99.48 True fake: scaffold gap size wrong estimation (local) 106423432 106424321 329538 330434 NC_000014.9 velvet.58477 99.89 True fake: not a misassembly (possible transposable element) 106422034 106422583 330994 330445 NC_000014.9 velvet.58477 100.0 True fake: not a misassembly (possible transposable element) 106426261 106427260 334359 335353 NC_000014.9 velvet.58477 98.79 True fake: scaffold gap size wrong estimation (local) 106462974 106463541 366058 366625 NC_000014.9 velvet.58477 100.0 True local misassembly 106459902 106460492 366636 367226 NC_000014.9 velvet.58477 99.83 True local misassembly 106458092 106458804 367256 367968 NC_000014.9 velvet.58477 99.86 True local misassembly 106459028 106459571 367969 368512 NC_000014.9 velvet.58477 98.16 True fake: not a misassembly (possible transposable element) 106286178 106287262 369453 370537 NC_000014.9 velvet.58477 99.72 True fake: not a misassembly (possible transposable element) 106460848 106462279 370727 372158 NC_000014.9 velvet.58477 100.0 True relocation, scaffold gap is present, inconsistency = -174839 106287451 106289816 372169 374525 NC_000014.9 velvet.58477 99.49 True fake: scaffold gap size wrong estimation (local) 106290015 106292341 375518 377844 NC_000014.9 velvet.58477 99.91 True relocation, scaffold gap is present, inconsistency = -172885 106120756 106121359 379144 379747 NC_000014.9 velvet.58477 99.83 True relocation, scaffold gap is present, inconsistency = 270316 106391932 106393452 381524 380004 NC_000014.9 velvet.58477 100.0 True relocation, scaffold gap is present, inconsistency = 35474 106324739 106325980 412002 413244 NC_000014.9 velvet.58477 99.84 True relocation, scaffold gap is present, inconsistency = -312925 106013066 106014249 413255 414438 NC_000014.9 velvet.58477 100.0 True CONTIG velvet.58477 415987 misassembled CONTIG velvet.58481 3881 unaligned 43460519 43461311 800 8 NC_000014.9 velvet.58489 100.0 True fake: scaffold gap size wrong estimation (local) 43448490 43457093 14270 4875 NC_000014.9 velvet.58489 99.57 True relocation, scaffold gap is present, inconsistency = 7577 43464681 43469295 14281 18949 NC_000014.9 velvet.58489 99.96 True fake: scaffold gap size wrong estimation (local) 43469578 43473159 20002 23583 NC_000014.9 velvet.58489 99.97 True fake: scaffold gap size wrong estimation (local) 43473287 43488811 24329 42019 NC_000014.9 velvet.58489 99.93 True fake: scaffold gap size wrong estimation (local) 43489551 43491982 43597 46027 NC_000014.9 velvet.58489 99.67 True fake: scaffold gap size wrong estimation (local) 43518212 43523293 67824 73703 NC_000014.9 velvet.58489 97.01 True fake: scaffold gap size wrong estimation (local) 43523521 43524571 74483 75533 NC_000014.9 velvet.58489 100.0 True fake: scaffold gap size wrong estimation (local) 43524878 43526505 76257 77884 NC_000014.9 velvet.58489 99.94 True CONTIG velvet.58489 77884 misassembled CONTIG velvet.58506 208 unaligned 39373767 39374795 4106 3078 NC_000014.9 velvet.58516 99.9 True CONTIG velvet.58516 4106 correct 18419855 18420454 80015 79367 NC_000014.9 velvet.58522 100.0 True fake: scaffold gap size wrong estimation (local) 18415436 18419448 85987 81205 NC_000014.9 velvet.58522 99.9 True fake: scaffold gap size wrong estimation (local) 18413730 18415238 87641 86133 NC_000014.9 velvet.58522 99.87 True fake: scaffold gap size wrong estimation (local) 18408044 18413441 94082 88685 NC_000014.9 velvet.58522 99.98 True fake: scaffold gap size wrong estimation (local) 18405249 18407883 97660 95064 NC_000014.9 velvet.58522 98.52 True fake: scaffold gap size wrong estimation (local) 18403516 18404042 100378 99852 NC_000014.9 velvet.58522 95.07 True local misassembly 18402525 18403289 101143 100379 NC_000014.9 velvet.58522 100.0 True local misassembly 18404074 18405178 104666 103562 NC_000014.9 velvet.58522 100.0 True fake: scaffold gap size wrong estimation (local) 18401533 18402266 107901 107168 NC_000014.9 velvet.58522 99.86 True fake: scaffold gap size wrong estimation (local) 18398763 18399577 111423 110609 NC_000014.9 velvet.58522 100.0 True local misassembly 18400152 18400809 112091 111434 NC_000014.9 velvet.58522 100.0 True fake: scaffold gap size wrong estimation (local) 18397985 18398731 113968 113222 NC_000014.9 velvet.58522 100.0 True fake: scaffold gap size wrong estimation (local) 18396364 18397473 116386 115277 NC_000014.9 velvet.58522 99.1 True fake: scaffold gap size wrong estimation (local) 18392305 18395430 121150 118025 NC_000014.9 velvet.58522 99.97 True fake: scaffold gap size wrong estimation (local) 18391308 18392120 122530 121718 NC_000014.9 velvet.58522 100.0 True relocation, scaffold gap is present, inconsistency = 10514 18379894 18380783 122541 123428 NC_000014.9 velvet.58522 99.66 True fake: scaffold gap size wrong estimation (local) 18381001 18381852 124105 124956 NC_000014.9 velvet.58522 100.0 True fake: scaffold gap size wrong estimation (local) 18382145 18383500 125437 126793 NC_000014.9 velvet.58522 99.85 True fake: scaffold gap size wrong estimation (local) 18383645 18385743 127732 129830 NC_000014.9 velvet.58522 99.86 True fake: not a misassembly (possible transposable element) 18385729 18388014 132834 130549 NC_000014.9 velvet.58522 100.0 True fake: not a misassembly (possible transposable element) 18388333 18391066 132845 135578 NC_000014.9 velvet.58522 99.93 True relocation, scaffold gap is present, inconsistency = 12617 18367044 18369576 144228 141718 NC_000014.9 velvet.58522 99.03 True fake: scaffold gap size wrong estimation (local) 18365947 18366874 146038 145111 NC_000014.9 velvet.58522 100.0 True fake: scaffold gap size wrong estimation (local) 18354038 18364609 159416 147976 NC_000014.9 velvet.58522 99.99 True relocation, scaffold gap is present, inconsistency = -84114151 102442223 102444179 185685 183426 NC_000014.9 velvet.58522 99.89 True relocation, scaffold gap is present, inconsistency = 83834202 18496317 18496968 296738 297389 NC_000014.9 velvet.58522 99.85 True CONTIG velvet.58522 377067 misassembled 45418235 45418946 3479 4190 NC_000014.9 velvet.58592 99.72 True local misassembly 45419265 45420856 4191 5782 NC_000014.9 velvet.58592 99.81 True fake: scaffold gap size wrong estimation (local) 45421231 45424080 6965 9814 NC_000014.9 velvet.58592 99.86 True fake: scaffold gap size wrong estimation (local) 45424851 45430107 11519 16761 NC_000014.9 velvet.58592 99.54 True CONTIG velvet.58592 20306 correct 92045799 92046422 7136 7759 NC_000014.9 velvet.58609 99.52 True fake: scaffold gap size wrong estimation (local) 92048612 92049258 10514 11151 NC_000014.9 velvet.58609 98.43 True fake: scaffold gap size wrong estimation (local) 92050794 92051730 13691 14627 NC_000014.9 velvet.58609 100.0 True CONTIG velvet.58609 14753 correct CONTIG velvet.58623 2554 unaligned 63804797 63805322 7041 6519 NC_000014.9 velvet.58626 99.24 True unknown 63783502 63784214 36337 35625 NC_000014.9 velvet.58626 99.86 True unknown 63782468 63783346 37811 36933 NC_000014.9 velvet.58626 100.0 True unknown 63775541 63776579 47777 46739 NC_000014.9 velvet.58626 100.0 True unknown 63776870 63777681 48599 47788 NC_000014.9 velvet.58626 99.88 True unknown CONTIG velvet.58626 50916 mis_unaligned 45289923 45290623 1 701 NC_000014.9 velvet.58633 100.0 True CONTIG velvet.58633 3786 correct CONTIG velvet.58652 3716 unaligned CONTIG velvet.58673 250 unaligned 35733464 35734207 744 1 NC_000014.9 velvet.58782 99.6 True fake: scaffold gap size wrong estimation (local) 35708228 35708739 23081 22565 NC_000014.9 velvet.58782 98.84 True fake: scaffold gap size wrong estimation (local) 35702924 35703837 24060 23092 NC_000014.9 velvet.58782 100.0 True fake: scaffold gap size wrong estimation (local) 35697622 35702741 29791 24572 NC_000014.9 velvet.58782 100.0 True fake: scaffold gap size wrong estimation (local) 35696607 35697328 31760 31039 NC_000014.9 velvet.58782 100.0 True relocation, scaffold gap is present, inconsistency = -11626 35703858 35708222 36135 31771 NC_000014.9 velvet.58782 100.0 True fake: scaffold gap size wrong estimation (local) 35667391 35668197 69445 68639 NC_000014.9 velvet.58782 100.0 True relocation, scaffold gap is present, inconsistency = -29181 35695016 35696105 71001 69912 NC_000014.9 velvet.58782 100.0 True fake: scaffold gap size wrong estimation (local) 35692553 35694806 74275 72022 NC_000014.9 velvet.58782 99.16 True fake: scaffold gap size wrong estimation (local) 35691068 35692552 75883 74399 NC_000014.9 velvet.58782 99.33 True local misassembly 35682577 35684690 77997 75884 NC_000014.9 velvet.58782 100.0 True fake: scaffold gap size wrong estimation (local) 35676471 35680217 85328 81582 NC_000014.9 velvet.58782 100.0 True fake: scaffold gap size wrong estimation (local) 35675446 35676197 87233 86482 NC_000014.9 velvet.58782 100.0 True fake: scaffold gap size wrong estimation (local) 35673837 35675212 88709 87334 NC_000014.9 velvet.58782 100.0 True fake: scaffold gap size wrong estimation (local) 35670926 35673273 92538 90191 NC_000014.9 velvet.58782 100.0 True fake: scaffold gap size wrong estimation (local) 35669508 35670638 94732 93602 NC_000014.9 velvet.58782 100.0 True fake: scaffold gap size wrong estimation (local) 35663865 35665999 96877 94743 NC_000014.9 velvet.58782 100.0 True local misassembly 35668582 35669262 98339 97659 NC_000014.9 velvet.58782 100.0 True fake: scaffold gap size wrong estimation (local) 35666499 35667143 101636 100992 NC_000014.9 velvet.58782 100.0 True fake: scaffold gap size wrong estimation (local) 35657455 35663434 110959 104849 NC_000014.9 velvet.58782 99.95 True fake: scaffold gap size wrong estimation (extensive) 35648655 35650096 112357 110970 NC_000014.9 velvet.58782 96.23 True fake: scaffold gap size wrong estimation (local) 35645721 35647670 116190 114241 NC_000014.9 velvet.58782 100.0 True fake: scaffold gap size wrong estimation (local) 35643319 35645342 119469 117461 NC_000014.9 velvet.58782 98.51 True fake: scaffold gap size wrong estimation (local) 35640466 35642583 123410 121369 NC_000014.9 velvet.58782 96.24 True fake: scaffold gap size wrong estimation (local) 35638913 35639657 125804 125060 NC_000014.9 velvet.58782 100.0 True fake: scaffold gap size wrong estimation (local) 35635139 35638642 130195 126304 NC_000014.9 velvet.58782 99.91 True fake: scaffold gap size wrong estimation (local) 35630820 35634946 135273 131148 NC_000014.9 velvet.58782 99.98 True relocation, scaffold gap is present, inconsistency = 18041 35610556 35611141 137496 136911 NC_000014.9 velvet.58782 100.0 True relocation, scaffold gap is present, inconsistency = 17826097 53437249 53443140 137507 143429 NC_000014.9 velvet.58782 99.29 True fake: scaffold gap size wrong estimation (local) 53443394 53447529 144478 148613 NC_000014.9 velvet.58782 99.98 True fake: scaffold gap size wrong estimation (local) 53448366 53451587 150326 153547 NC_000014.9 velvet.58782 100.0 True relocation, scaffold gap is present, inconsistency = 17838210 35606740 35608955 156963 154748 NC_000014.9 velvet.58782 99.19 True fake: scaffold gap size wrong estimation (local) 35603601 35606739 160913 157775 NC_000014.9 velvet.58782 99.84 True fake: not a misassembly (possible transposable element) 53451820 53453702 160920 162802 NC_000014.9 velvet.58782 99.79 True fake: not a misassembly (possible transposable element) 35600501 35603600 165908 162809 NC_000014.9 velvet.58782 100.0 True relocation, inconsistency = 17850103 53453704 53455110 165909 167315 NC_000014.9 velvet.58782 99.29 True fake: scaffold gap size wrong estimation (local) 53455250 53459158 167432 171340 NC_000014.9 velvet.58782 99.97 True fake: scaffold gap size wrong estimation (local) 53459444 53461632 172437 174625 NC_000014.9 velvet.58782 99.95 True relocation, scaffold gap is present, inconsistency = 17864436 35592577 35593800 177044 175833 NC_000014.9 velvet.58782 99.02 True fake: scaffold gap size wrong estimation (local) 35590668 35591287 178697 178078 NC_000014.9 velvet.58782 100.0 True CONTIG velvet.58782 178764 misassembled CONTIG velvet.58787 284 unaligned 80709995 80722840 13008 1 NC_000014.9 velvet.58793 98.85 True fake: scaffold gap size wrong estimation (local) 80677509 80681699 42901 38154 NC_000014.9 velvet.58793 97.04 True fake: scaffold gap size wrong estimation (local) 80674074 80677224 47025 43875 NC_000014.9 velvet.58793 99.78 True fake: scaffold gap size wrong estimation (local) 80670119 80673349 51720 48493 NC_000014.9 velvet.58793 99.69 True fake: not a misassembly (possible transposable element) 79773862 79775573 53767 55478 NC_000014.9 velvet.58793 100.0 True fake: not a misassembly (possible transposable element) 80667858 80668717 58692 57833 NC_000014.9 velvet.58793 100.0 True relocation, scaffold gap is present, inconsistency = 877072 79780609 79788001 61477 69045 NC_000014.9 velvet.58793 99.95 True fake: not a misassembly (possible transposable element) 28187334 28188437 71174 70071 NC_000014.9 velvet.58793 99.82 True fake: not a misassembly (possible transposable element) 79789489 79790289 71175 71975 NC_000014.9 velvet.58793 99.76 True relocation, scaffold gap is present, inconsistency = 51601907 28185853 28186865 73704 72692 NC_000014.9 velvet.58793 99.9 True relocation, scaffold gap is present, inconsistency = 52455809 80643056 80643673 74086 74703 NC_000014.9 velvet.58793 99.84 True inversion, scaffold gap is present 80643688 80646994 78215 74909 NC_000014.9 velvet.58793 99.91 True fake: scaffold gap size wrong estimation (local) 80642090 80642759 80264 79595 NC_000014.9 velvet.58793 99.55 True fake: scaffold gap size wrong estimation (local) 80637103 80641833 85836 81106 NC_000014.9 velvet.58793 99.85 True relocation, scaffold gap is present, inconsistency = 3471152 77164788 77165940 85847 86999 NC_000014.9 velvet.58793 99.91 True local misassembly 77166261 77166996 87000 87735 NC_000014.9 velvet.58793 98.51 True fake: scaffold gap size wrong estimation (local) 77172622 77173896 88178 89449 NC_000014.9 velvet.58793 99.69 True local misassembly 77167459 77168064 89460 90065 NC_000014.9 velvet.58793 100.0 True fake: scaffold gap size wrong estimation (local) 77168787 77169426 90387 91026 NC_000014.9 velvet.58793 98.28 True indel: indel (> 5bp) 77169635 77171135 91222 92722 NC_000014.9 velvet.58793 99.13 True fake: scaffold gap size wrong estimation (local) 77171136 77172184 92771 93819 NC_000014.9 velvet.58793 97.81 True relocation, scaffold gap is present, inconsistency = 45636156 31532178 31533609 96621 95190 NC_000014.9 velvet.58793 100.0 True fake: scaffold gap size wrong estimation (local) 31531390 31531908 97920 97402 NC_000014.9 velvet.58793 100.0 True fake: scaffold gap size wrong estimation (local) 31528235 31528800 101646 101081 NC_000014.9 velvet.58793 98.23 True fake: scaffold gap size wrong estimation (local) 31527524 31528234 102760 102050 NC_000014.9 velvet.58793 96.91 True fake: scaffold gap size wrong estimation (local) 31525288 31526116 105810 104982 NC_000014.9 velvet.58793 99.64 True fake: scaffold gap size wrong estimation (local) 31519277 31525053 113637 106825 NC_000014.9 velvet.58793 99.91 True fake: scaffold gap size wrong estimation (local) 31518333 31519016 114901 114218 NC_000014.9 velvet.58793 100.0 True fake: scaffold gap size wrong estimation (local) 31516089 31517688 117535 115936 NC_000014.9 velvet.58793 99.88 True fake: scaffold gap size wrong estimation (local) 31514032 31515766 120302 118528 NC_000014.9 velvet.58793 99.88 True fake: scaffold gap size wrong estimation (local) 31512657 31513187 122291 121761 NC_000014.9 velvet.58793 100.0 True fake: scaffold gap size wrong estimation (local) 31487701 31488272 151408 150837 NC_000014.9 velvet.58793 98.25 True local misassembly 31486333 31487426 152502 151409 NC_000014.9 velvet.58793 99.82 True relocation, scaffold gap is present, inconsistency = -11976 31494028 31494581 156783 156230 NC_000014.9 velvet.58793 100.0 True fake: scaffold gap size wrong estimation (local) 31492852 31493561 157681 156972 NC_000014.9 velvet.58793 98.87 True fake: scaffold gap size wrong estimation (local) 31488293 31491864 163160 159569 NC_000014.9 velvet.58793 98.42 True fake: scaffold gap size wrong estimation (local) 31453046 31455295 196983 194734 NC_000014.9 velvet.58793 100.0 True fake: scaffold gap size wrong estimation (local) 31451421 31452924 199130 197627 NC_000014.9 velvet.58793 99.93 True fake: scaffold gap size wrong estimation (local) 31449165 31451142 201916 199939 NC_000014.9 velvet.58793 99.75 True fake: scaffold gap size wrong estimation (local) 31447804 31448901 203710 202613 NC_000014.9 velvet.58793 100.0 True relocation, scaffold gap is present, inconsistency = -25826 31464905 31465803 212435 211537 NC_000014.9 velvet.58793 98.89 True fake: scaffold gap size wrong estimation (local) 31462936 31463533 215280 214683 NC_000014.9 velvet.58793 98.33 True local misassembly 31461694 31462490 216077 215281 NC_000014.9 velvet.58793 100.0 True fake: scaffold gap size wrong estimation (local) 31460126 31461255 220028 218899 NC_000014.9 velvet.58793 100.0 True fake: scaffold gap size wrong estimation (local) 31456386 31459811 225905 222480 NC_000014.9 velvet.58793 100.0 True CONTIG velvet.58793 227186 misassembled 42908896 42910705 1253 3094 NC_000014.9 velvet.58795 97.19 True fake: scaffold gap size wrong estimation (local) 42910804 42914163 3248 6635 NC_000014.9 velvet.58795 98.26 True fake: scaffold gap size wrong estimation (local) 42915030 42916183 7784 8955 NC_000014.9 velvet.58795 96.94 True fake: scaffold gap size wrong estimation (local) 42916598 42923746 10279 17449 NC_000014.9 velvet.58795 99.54 True fake: scaffold gap size wrong estimation (local) 42923911 42925156 18355 19599 NC_000014.9 velvet.58795 99.84 True fake: scaffold gap size wrong estimation (local) 42925280 42926842 19958 21456 NC_000014.9 velvet.58795 95.88 True fake: scaffold gap size wrong estimation (local) 42927069 42938271 22391 33599 NC_000014.9 velvet.58795 99.87 True fake: scaffold gap size wrong estimation (local) 42938908 42949828 35077 46029 NC_000014.9 velvet.58795 99.9 True CONTIG velvet.58795 51831 correct 20783530 20785228 1699 1 NC_000014.9 velvet.58853 99.88 True CONTIG velvet.58853 1699 correct 104962732 104963574 283 1125 NC_000014.9 velvet.58919 100.0 True local misassembly 104959647 104960883 1136 2372 NC_000014.9 velvet.58919 99.76 True inversion, scaffold gap is present 104953396 104958162 7131 2383 NC_000014.9 velvet.58919 99.5 True fake: scaffold gap size wrong estimation (local) 104934089 104941866 24853 17076 NC_000014.9 velvet.58919 99.73 True fake: scaffold gap size wrong estimation (local) 104923438 104933610 36956 26822 NC_000014.9 velvet.58919 99.56 True fake: scaffold gap size wrong estimation (local) 104922700 104923311 38237 37626 NC_000014.9 velvet.58919 100.0 True fake: scaffold gap size wrong estimation (local) 104916314 104917622 39641 38332 NC_000014.9 velvet.58919 99.85 True fake: not a misassembly (possible transposable element) 104991325 104991965 39652 40292 NC_000014.9 velvet.58919 99.84 True fake: not a misassembly (possible transposable element) 104920752 104921817 41368 40303 NC_000014.9 velvet.58919 100.0 True fake: scaffold gap size wrong estimation (local) 104918600 104920271 46169 44488 NC_000014.9 velvet.58919 99.58 True relocation, scaffold gap is present, inconsistency = 12219711 92691712 92695542 53428 49516 NC_000014.9 velvet.58919 99.97 True fake: scaffold gap size wrong estimation (local) 92689989 92691429 55324 53884 NC_000014.9 velvet.58919 99.93 True relocation, scaffold gap is present, inconsistency = -12228538 104914154 104915825 59696 58026 NC_000014.9 velvet.58919 99.76 True fake: scaffold gap size wrong estimation (local) 104910906 104911737 65908 65077 NC_000014.9 velvet.58919 99.88 True fake: scaffold gap size wrong estimation (local) 104909737 104910552 66874 66059 NC_000014.9 velvet.58919 100.0 True fake: scaffold gap size wrong estimation (local) 104907892 104909006 69978 68864 NC_000014.9 velvet.58919 99.91 True fake: scaffold gap size wrong estimation (local) 104903830 104905250 72824 71404 NC_000014.9 velvet.58919 99.16 True indel: indel (> 5bp) 104903266 104903817 73376 72825 NC_000014.9 velvet.58919 100.0 True fake: scaffold gap size wrong estimation (local) 104899760 104900722 77247 76252 NC_000014.9 velvet.58919 99.89 True fake: scaffold gap size wrong estimation (local) 104897245 104899486 80528 78287 NC_000014.9 velvet.58919 99.91 True relocation, scaffold gap is present, inconsistency = 12207930 92684426 92689304 85414 80539 NC_000014.9 velvet.58919 99.9 True fake: scaffold gap size wrong estimation (local) 92683148 92684117 87374 86405 NC_000014.9 velvet.58919 99.9 True relocation, scaffold gap is present, inconsistency = -12219850 104902240 104902987 88132 87385 NC_000014.9 velvet.58919 98.4 True local misassembly 104900931 104901959 89161 88133 NC_000014.9 velvet.58919 100.0 True fake: scaffold gap size wrong estimation (local) 104891054 104896967 95212 89298 NC_000014.9 velvet.58919 99.8 True fake: scaffold gap size wrong estimation (local) 104885051 104889891 102163 97323 NC_000014.9 velvet.58919 99.83 True fake: scaffold gap size wrong estimation (local) 104872330 104884561 115659 103388 NC_000014.9 velvet.58919 99.44 True fake: scaffold gap size wrong estimation (local) 104865326 104872152 122610 115783 NC_000014.9 velvet.58919 99.87 True fake: scaffold gap size wrong estimation (local) 104862348 104865051 126434 123699 NC_000014.9 velvet.58919 99.81 True relocation, scaffold gap is present, inconsistency = 12160975 92678220 92679304 149587 148503 NC_000014.9 velvet.58919 99.82 True local misassembly 92674891 92677797 152494 149588 NC_000014.9 velvet.58919 99.97 True fake: scaffold gap size wrong estimation (local) 92663082 92664333 169167 167916 NC_000014.9 velvet.58919 99.92 True fake: scaffold gap size wrong estimation (local) 92661656 92662820 170431 169298 NC_000014.9 velvet.58919 97.14 True fake: scaffold gap size wrong estimation (local) 92657375 92661448 175655 171582 NC_000014.9 velvet.58919 99.85 True relocation, scaffold gap is present, inconsistency = -7998 92664629 92665362 176399 175666 NC_000014.9 velvet.58919 99.86 True fake: scaffold gap size wrong estimation (extensive) 92655323 92657079 178570 176814 NC_000014.9 velvet.58919 99.89 True relocation, scaffold gap is present, inconsistency = 2853649 95510801 95511448 178643 179290 NC_000014.9 velvet.58919 100.0 True relocation, scaffold gap is present, inconsistency = 2830605 92679336 92680185 180150 179301 NC_000014.9 velvet.58919 99.76 True fake: scaffold gap size wrong estimation (extensive) 92670075 92672171 182257 180161 NC_000014.9 velvet.58919 99.43 True indel: indel (> 5bp) 92669052 92669978 183196 182270 NC_000014.9 velvet.58919 98.38 True local misassembly 92667518 92669042 186622 185098 NC_000014.9 velvet.58919 99.21 True fake: scaffold gap size wrong estimation (local) 92665649 92667230 188482 186901 NC_000014.9 velvet.58919 100.0 True relocation, scaffold gap is present, inconsistency = 16990798 75673167 75674840 190166 188493 NC_000014.9 velvet.58919 99.88 True relocation, scaffold gap is present, inconsistency = 337838 75333547 75335318 190177 191947 NC_000014.9 velvet.58919 99.83 True fake: scaffold gap size wrong estimation (local) 75335459 75336220 192615 193376 NC_000014.9 velvet.58919 100.0 True relocation, scaffold gap is present, inconsistency = 311787 75650126 75652811 198180 195495 NC_000014.9 velvet.58919 100.0 True relocation, scaffold gap is present, inconsistency = -9240 75656299 75659355 201246 198191 NC_000014.9 velvet.58919 99.93 True relocation, scaffold gap is present, inconsistency = 6490100 82163355 82163916 215146 215707 NC_000014.9 velvet.58919 99.83 True relocation, inconsistency = 10454400 92618317 92619428 216819 215708 NC_000014.9 velvet.58919 99.91 True inversion, scaffold gap is present 92622419 92629142 223098 229821 NC_000014.9 velvet.58919 99.82 True fake: scaffold gap size wrong estimation (local) 92630480 92631616 232003 233139 NC_000014.9 velvet.58919 100.0 True relocation, scaffold gap is present, inconsistency = 17007469 75621406 75622964 234744 233186 NC_000014.9 velvet.58919 99.87 True fake: scaffold gap size wrong estimation (local) 75619167 75621162 237781 235798 NC_000014.9 velvet.58919 99.3 True relocation, scaffold gap is present, inconsistency = -8946 75626265 75628102 239629 237792 NC_000014.9 velvet.58919 99.95 True fake: scaffold gap size wrong estimation (local) 75623253 75623768 240155 239640 NC_000014.9 velvet.58919 100.0 True relocation, scaffold gap is present, inconsistency = 10661 75604566 75606044 248181 246703 NC_000014.9 velvet.58919 99.93 True fake: scaffold gap size wrong estimation (local) 75601654 75604458 251821 249017 NC_000014.9 velvet.58919 99.93 True relocation, scaffold gap is present, inconsistency = -13034 75613823 75614677 252686 251832 NC_000014.9 velvet.58919 99.88 True fake: scaffold gap size wrong estimation (local) 75611575 75613194 255668 254021 NC_000014.9 velvet.58919 98.12 True fake: scaffold gap size wrong estimation (local) 75608030 75611455 259850 256206 NC_000014.9 velvet.58919 100.0 True relocation, scaffold gap is present, inconsistency = 11033 75595848 75596717 260999 260130 NC_000014.9 velvet.58919 99.66 True fake: not a misassembly (possible transposable element) 75594761 75595865 261773 262877 NC_000014.9 velvet.58919 99.82 True fake: not a misassembly (possible transposable element) 75592831 75594705 264762 262888 NC_000014.9 velvet.58919 100.0 True relocation, scaffold gap is present, inconsistency = -8154 75600446 75600974 265301 264773 NC_000014.9 velvet.58919 100.0 True inversion, scaffold gap is present 75585668 75588576 270632 273538 NC_000014.9 velvet.58919 99.66 True fake: scaffold gap size wrong estimation (local) 75589205 75590529 275468 276792 NC_000014.9 velvet.58919 100.0 True inversion, scaffold gap is present 75584560 75585418 277661 276803 NC_000014.9 velvet.58919 99.42 True relocation, scaffold gap is present, inconsistency = 13077 75598720 75600433 277886 279600 NC_000014.9 velvet.58919 99.65 True local misassembly 75598147 75598707 280615 281168 NC_000014.9 velvet.58919 98.4 True inversion, scaffold gap is present 75592054 75592701 282660 282013 NC_000014.9 velvet.58919 100.0 True relocation, scaffold gap is present, inconsistency = 13103 75570360 75573015 291251 288596 NC_000014.9 velvet.58919 99.96 True fake: scaffold gap size wrong estimation (local) 75567607 75570092 294835 292350 NC_000014.9 velvet.58919 100.0 True fake: scaffold gap size wrong estimation (local) 75564768 75567195 298517 296106 NC_000014.9 velvet.58919 99.21 True relocation, scaffold gap is present, inconsistency = -14636 75563049 75564558 314870 313363 NC_000014.9 velvet.58919 99.8 True fake: scaffold gap size wrong estimation (local) 75559548 75562882 319237 315292 NC_000014.9 velvet.58919 99.91 True relocation, scaffold gap is present, inconsistency = 50200 75614807 75615779 320962 321934 NC_000014.9 velvet.58919 99.9 True fake: scaffold gap size wrong estimation (extensive) 75624396 75626115 321945 323665 NC_000014.9 velvet.58919 99.94 True relocation, scaffold gap is present, inconsistency = -9982 75616346 75618899 323878 326431 NC_000014.9 velvet.58919 99.92 True fake: scaffold gap size wrong estimation (extensive) 75628377 75635620 326442 333684 NC_000014.9 velvet.58919 99.96 True fake: scaffold gap size wrong estimation (local) 75635743 75637470 334537 336264 NC_000014.9 velvet.58919 99.94 True relocation, scaffold gap is present, inconsistency = 75257 75558198 75559213 338552 337537 NC_000014.9 velvet.58919 99.8 True fake: scaffold gap size wrong estimation (local) 75552158 75554990 341437 338563 NC_000014.9 velvet.58919 99.36 True relocation, scaffold gap is present, inconsistency = 51865 75498874 75500282 341448 342852 NC_000014.9 velvet.58919 99.71 True fake: scaffold gap size wrong estimation (local) 75500562 75502636 343773 345887 NC_000014.9 velvet.58919 99.95 True fake: scaffold gap size wrong estimation (local) 75502884 75503397 346869 347382 NC_000014.9 velvet.58919 100.0 True relocation, scaffold gap is present, inconsistency = 21503486 97007368 97012629 353128 347867 NC_000014.9 velvet.58919 99.9 True local misassembly 97004135 97007080 356465 353520 NC_000014.9 velvet.58919 99.97 True fake: not a misassembly (possible transposable element) 97061513 97063936 357513 359936 NC_000014.9 velvet.58919 99.96 True fake: not a misassembly (possible transposable element) 96993894 97000006 366059 359947 NC_000014.9 velvet.58919 100.0 True local misassembly 97000060 97000838 366853 366070 NC_000014.9 velvet.58919 100.0 True local misassembly 97000844 97001885 367951 366864 NC_000014.9 velvet.58919 99.8 True relocation, scaffold gap is present, inconsistency = 21361786 75638448 75638983 368026 368561 NC_000014.9 velvet.58919 100.0 True fake: scaffold gap size wrong estimation (local) 75639079 75640021 368572 369560 NC_000014.9 velvet.58919 100.0 True fake: scaffold gap size wrong estimation (local) 75640290 75642945 370697 373393 NC_000014.9 velvet.58919 100.0 True fake: not a misassembly (possible transposable element) 95521780 95523312 374936 373404 NC_000014.9 velvet.58919 99.93 True fake: not a misassembly (possible transposable element) 75643933 75645666 375108 376877 NC_000014.9 velvet.58919 99.75 True fake: scaffold gap size wrong estimation (local) 75645951 75648979 377922 380950 NC_000014.9 velvet.58919 99.97 True fake: scaffold gap size wrong estimation (local) 75649264 75649981 381656 382373 NC_000014.9 velvet.58919 99.86 True fake: scaffold gap size wrong estimation (extensive) 75659414 75661133 383678 385488 NC_000014.9 velvet.58919 99.94 True relocation, scaffold gap is present, inconsistency = -7543 75653601 75656305 385499 388272 NC_000014.9 velvet.58919 99.96 True relocation, scaffold gap is present, inconsistency = 21427333 97083649 97084918 388283 389551 NC_000014.9 velvet.58919 99.92 True relocation, scaffold gap is present, inconsistency = -16319 97068611 97073965 389563 394911 NC_000014.9 velvet.58919 99.87 True fake: scaffold gap size wrong estimation (local) 97074221 97075374 395914 397067 NC_000014.9 velvet.58919 100.0 True relocation, scaffold gap is present, inconsistency = 115913 96953174 96957790 402204 397585 NC_000014.9 velvet.58919 99.83 True fake: scaffold gap size wrong estimation (extensive) 96941528 96945372 406099 402215 NC_000014.9 velvet.58919 99.84 True fake: scaffold gap size wrong estimation (local) 96938729 96941332 409646 407043 NC_000014.9 velvet.58919 99.96 True fake: scaffold gap size wrong estimation (local) 96933213 96938408 415995 410799 NC_000014.9 velvet.58919 99.85 True fake: scaffold gap size wrong estimation (local) 96931829 96933038 418107 416898 NC_000014.9 velvet.58919 99.67 True fake: scaffold gap size wrong estimation (local) 96929933 96931556 420208 418521 NC_000014.9 velvet.58919 99.88 True relocation, scaffold gap is present, inconsistency = 21321981 75606948 75607941 421212 420219 NC_000014.9 velvet.58919 100.0 True fake: scaffold gap size wrong estimation (local) 75578853 75580503 445861 444211 NC_000014.9 velvet.58919 99.94 True fake: scaffold gap size wrong estimation (local) 75576112 75578499 449520 447133 NC_000014.9 velvet.58919 99.92 True fake: scaffold gap size wrong estimation (local) 75574510 75575893 452005 450663 NC_000014.9 velvet.58919 97.02 True fake: scaffold gap size wrong estimation (local) 75573282 75574296 453149 452135 NC_000014.9 velvet.58919 99.9 True relocation, scaffold gap is present, inconsistency = -10670339 86241034 86243610 455742 453160 NC_000014.9 velvet.58919 99.38 True fake: not a misassembly (possible transposable element) 86236095 86237654 455753 457311 NC_000014.9 velvet.58919 99.1 True fake: not a misassembly (possible transposable element) 86208710 86211086 487888 485512 NC_000014.9 velvet.58919 99.96 True relocation, scaffold gap is present, inconsistency = 50067131 36139152 36141503 487964 490315 NC_000014.9 velvet.58919 99.79 True fake: scaffold gap size wrong estimation (local) 36141650 36142684 491480 492514 NC_000014.9 velvet.58919 99.9 True fake: scaffold gap size wrong estimation (local) 36168865 36180954 516060 528120 NC_000014.9 velvet.58919 99.67 True fake: scaffold gap size wrong estimation (local) 36181259 36182086 529075 529902 NC_000014.9 velvet.58919 100.0 True relocation, scaffold gap is present, inconsistency = 39290899 75476142 75477224 534185 533059 NC_000014.9 velvet.58919 99.62 True relocation, scaffold gap is present, inconsistency = 15344 75503717 75505232 545334 546850 NC_000014.9 velvet.58919 99.87 True fake: scaffold gap size wrong estimation (local) 75505499 75507516 547950 549967 NC_000014.9 velvet.58919 99.95 True fake: scaffold gap size wrong estimation (local) 75507804 75512674 550954 556289 NC_000014.9 velvet.58919 99.94 True relocation, scaffold gap is present, inconsistency = 10743618 86256303 86263276 556300 563382 NC_000014.9 velvet.58919 99.38 True fake: scaffold gap size wrong estimation (local) 86265362 86266776 566630 568434 NC_000014.9 velvet.58919 99.63 True relocation, scaffold gap is present, inconsistency = 10723757 75536733 75538618 573246 571421 NC_000014.9 velvet.58919 96.79 True fake: scaffold gap size wrong estimation (local) 75533429 75536442 577200 574125 NC_000014.9 velvet.58919 97.66 True fake: scaffold gap size wrong estimation (local) 75530082 75533183 581252 578227 NC_000014.9 velvet.58919 97.41 True fake: scaffold gap size wrong estimation (local) 75525660 75529807 586526 582174 NC_000014.9 velvet.58919 99.95 True relocation, scaffold gap is present, inconsistency = 9639 75539462 75540859 586542 587939 NC_000014.9 velvet.58919 99.93 True fake: scaffold gap size wrong estimation (local) 75541095 75541682 588463 589050 NC_000014.9 velvet.58919 100.0 True fake: scaffold gap size wrong estimation (local) 75541966 75543784 589860 591727 NC_000014.9 velvet.58919 96.17 True fake: scaffold gap size wrong estimation (local) 75546008 75547207 596518 597717 NC_000014.9 velvet.58919 100.0 True fake: scaffold gap size wrong estimation (local) 75547555 75549026 598777 600248 NC_000014.9 velvet.58919 99.8 True fake: scaffold gap size wrong estimation (local) 75549155 75549970 600471 601286 NC_000014.9 velvet.58919 99.88 True fake: scaffold gap size wrong estimation (local) 75550289 75551985 602385 604083 NC_000014.9 velvet.58919 99.71 True relocation, scaffold gap is present, inconsistency = 10716277 86268364 86269871 604185 605684 NC_000014.9 velvet.58919 98.41 True fake: scaffold gap size wrong estimation (local) 86270137 86277903 607160 616369 NC_000014.9 velvet.58919 98.36 True fake: scaffold gap size wrong estimation (local) 86278177 86287077 617102 627218 NC_000014.9 velvet.58919 99.44 True fake: scaffold gap size wrong estimation (local) 86287210 86296697 627299 637755 NC_000014.9 velvet.58919 99.73 True fake: scaffold gap size wrong estimation (local) 86296898 86300593 638795 642492 NC_000014.9 velvet.58919 99.73 True fake: scaffold gap size wrong estimation (local) 86300795 86303947 643155 646977 NC_000014.9 velvet.58919 97.96 True fake: scaffold gap size wrong estimation (local) 86304205 86305446 647592 648833 NC_000014.9 velvet.58919 99.92 True fake: scaffold gap size wrong estimation (local) 86306357 86307304 650440 651387 NC_000014.9 velvet.58919 99.89 True fake: scaffold gap size wrong estimation (local) 86307536 86308479 654326 655269 NC_000014.9 velvet.58919 99.89 True fake: scaffold gap size wrong estimation (local) 86309471 86312259 656701 659489 NC_000014.9 velvet.58919 99.82 True fake: scaffold gap size wrong estimation (local) 86318391 86318919 664811 665339 NC_000014.9 velvet.58919 100.0 True local misassembly 86319241 86320427 665340 666526 NC_000014.9 velvet.58919 99.07 True local misassembly 86321166 86322114 667358 668306 NC_000014.9 velvet.58919 99.79 True indel: indel (> 5bp) 86322127 86322723 668307 668903 NC_000014.9 velvet.58919 98.32 True fake: scaffold gap size wrong estimation (local) 86323221 86330559 670134 677472 NC_000014.9 velvet.58919 99.88 True fake: scaffold gap size wrong estimation (local) 86330903 86339255 678542 687758 NC_000014.9 velvet.58919 99.41 True relocation, scaffold gap is present, inconsistency = 47277395 39052966 39053497 688300 687769 NC_000014.9 velvet.58919 100.0 True local misassembly 39055563 39056341 689089 688311 NC_000014.9 velvet.58919 99.49 True fake: scaffold gap size wrong estimation (local) 39052021 39052852 691142 690311 NC_000014.9 velvet.58919 100.0 True fake: scaffold gap size wrong estimation (local) 39050805 39051574 692487 691718 NC_000014.9 velvet.58919 100.0 True fake: not a misassembly (possible transposable element) 47937505 47938629 693622 692498 NC_000014.9 velvet.58919 99.82 True fake: not a misassembly (possible transposable element) 39054666 39055395 694362 693633 NC_000014.9 velvet.58919 99.73 True fake: scaffold gap size wrong estimation (local) 39053529 39054128 695476 694876 NC_000014.9 velvet.58919 99.83 True fake: scaffold gap size wrong estimation (local) 39023674 39024591 723918 723001 NC_000014.9 velvet.58919 99.78 True relocation, scaffold gap is present, inconsistency = 47315970 86340572 86341594 723929 724949 NC_000014.9 velvet.58919 99.41 True fake: not a misassembly (possible transposable element) 39050044 39050703 725982 725323 NC_000014.9 velvet.58919 100.0 True fake: not a misassembly (possible transposable element) 86342026 86346527 725993 731002 NC_000014.9 velvet.58919 99.62 True fake: scaffold gap size wrong estimation (local) 86346637 86349895 731487 735317 NC_000014.9 velvet.58919 99.84 True fake: scaffold gap size wrong estimation (local) 86350015 86355735 736053 742451 NC_000014.9 velvet.58919 99.82 True fake: scaffold gap size wrong estimation (local) 86356558 86370455 743970 759799 NC_000014.9 velvet.58919 98.92 True fake: scaffold gap size wrong estimation (local) 86370646 86373423 760792 763543 NC_000014.9 velvet.58919 96.95 True fake: scaffold gap size wrong estimation (local) 86373854 86375617 764845 766608 NC_000014.9 velvet.58919 99.55 True fake: scaffold gap size wrong estimation (local) 86376127 86377270 767541 768684 NC_000014.9 velvet.58919 99.56 True fake: scaffold gap size wrong estimation (local) 86377361 86378406 769241 770286 NC_000014.9 velvet.58919 99.52 True fake: scaffold gap size wrong estimation (local) 86378832 86385006 771517 777691 NC_000014.9 velvet.58919 99.85 True fake: scaffold gap size wrong estimation (local) 86385028 86389343 780448 784763 NC_000014.9 velvet.58919 99.68 True fake: scaffold gap size wrong estimation (local) 86389531 86394707 785674 790907 NC_000014.9 velvet.58919 99.86 True fake: scaffold gap size wrong estimation (local) 86399568 86400887 790918 792237 NC_000014.9 velvet.58919 100.0 True fake: scaffold gap size wrong estimation (local) 86406538 86410067 792248 795823 NC_000014.9 velvet.58919 99.74 True local misassembly 86404217 86406234 795834 797851 NC_000014.9 velvet.58919 100.0 True fake: scaffold gap size wrong estimation (local) 86410133 86415447 797862 803140 NC_000014.9 velvet.58919 99.0 True relocation, scaffold gap is present, inconsistency = -17211 86398247 86399561 803151 804465 NC_000014.9 velvet.58919 99.92 True fake: scaffold gap size wrong estimation (local) 86401261 86403910 804476 807125 NC_000014.9 velvet.58919 99.92 True fake: scaffold gap size wrong estimation (extensive) 86415536 86417289 811341 813100 NC_000014.9 velvet.58919 96.59 True fake: scaffold gap size wrong estimation (local) 86418099 86420622 814706 817279 NC_000014.9 velvet.58919 99.4 True fake: scaffold gap size wrong estimation (local) 86420919 86426578 818283 824465 NC_000014.9 velvet.58919 99.22 True fake: scaffold gap size wrong estimation (local) 86426938 86427749 824985 825808 NC_000014.9 velvet.58919 96.03 True fake: scaffold gap size wrong estimation (local) 86427969 86440829 826546 841937 NC_000014.9 velvet.58919 99.15 True fake: scaffold gap size wrong estimation (local) 86441066 86443288 842972 845141 NC_000014.9 velvet.58919 97.51 True fake: scaffold gap size wrong estimation (local) 86444460 86451209 847250 854030 NC_000014.9 velvet.58919 99.15 True fake: scaffold gap size wrong estimation (local) 86461437 86465243 859383 863248 NC_000014.9 velvet.58919 99.81 True fake: scaffold gap size wrong estimation (local) 86465681 86466954 864402 865675 NC_000014.9 velvet.58919 99.92 True relocation, scaffold gap is present, inconsistency = -14966 86452007 86460318 865694 874004 NC_000014.9 velvet.58919 99.65 True fake: scaffold gap size wrong estimation (local) 86460602 86461367 874872 875621 NC_000014.9 velvet.58919 97.91 True fake: scaffold gap size wrong estimation (local) 86475448 86475986 892228 892766 NC_000014.9 velvet.58919 99.81 True fake: scaffold gap size wrong estimation (local) 86476191 86480512 893918 898239 NC_000014.9 velvet.58919 99.84 True fake: scaffold gap size wrong estimation (local) 86480706 86503798 899276 923333 NC_000014.9 velvet.58919 99.9 True fake: scaffold gap size wrong estimation (local) 86503971 86517468 924520 939916 NC_000014.9 velvet.58919 97.96 True fake: scaffold gap size wrong estimation (local) 86517726 86520390 940671 943335 NC_000014.9 velvet.58919 99.92 True fake: scaffold gap size wrong estimation (local) 86520676 86537411 944357 961675 NC_000014.9 velvet.58919 99.59 True fake: scaffold gap size wrong estimation (local) 86537555 86548062 962373 972908 NC_000014.9 velvet.58919 99.62 True fake: scaffold gap size wrong estimation (local) 86548411 86549272 973616 974472 NC_000014.9 velvet.58919 99.42 True fake: scaffold gap size wrong estimation (local) 86549453 86551976 975271 977794 NC_000014.9 velvet.58919 99.92 True fake: scaffold gap size wrong estimation (local) 86555593 86559083 977805 981295 NC_000014.9 velvet.58919 99.83 True fake: scaffold gap size wrong estimation (local) 86559508 86562879 982472 985843 NC_000014.9 velvet.58919 99.79 True fake: not a misassembly (possible transposable element) 102936980 102938643 989358 987695 NC_000014.9 velvet.58919 99.94 True fake: not a misassembly (possible transposable element) 86564333 86567975 992348 995990 NC_000014.9 velvet.58919 100.0 True fake: scaffold gap size wrong estimation (local) 86568327 86577719 997102 1006460 NC_000014.9 velvet.58919 99.61 True fake: scaffold gap size wrong estimation (local) 86577996 86582186 1007576 1011766 NC_000014.9 velvet.58919 99.98 True relocation, scaffold gap is present, inconsistency = 16353045 102935761 102936971 1013506 1012296 NC_000014.9 velvet.58919 100.0 True fake: scaffold gap size wrong estimation (local) 102935017 102935516 1014927 1014428 NC_000014.9 velvet.58919 100.0 True fake: not a misassembly (possible transposable element) 102927194 102929099 1014938 1016843 NC_000014.9 velvet.58919 99.95 True fake: not a misassembly (possible transposable element) 102932899 102934116 1018071 1016854 NC_000014.9 velvet.58919 99.92 True fake: scaffold gap size wrong estimation (local) 102924910 102926573 1019745 1018082 NC_000014.9 velvet.58919 99.76 True relocation, scaffold gap is present, inconsistency = -7945 102930237 102932844 1022363 1019756 NC_000014.9 velvet.58919 99.85 True fake: scaffold gap size wrong estimation (local) 102922001 102924884 1026630 1023748 NC_000014.9 velvet.58919 99.93 True fake: scaffold gap size wrong estimation (local) 102892325 102893104 1051863 1051084 NC_000014.9 velvet.58919 100.0 True fake: scaffold gap size wrong estimation (local) 102887868 102892094 1057063 1052837 NC_000014.9 velvet.58919 99.95 True fake: scaffold gap size wrong estimation (local) 102886748 102887581 1058848 1058015 NC_000014.9 velvet.58919 100.0 True fake: scaffold gap size wrong estimation (local) 102881679 102882551 1060139 1059267 NC_000014.9 velvet.58919 100.0 True local misassembly 102885241 102886470 1061379 1060150 NC_000014.9 velvet.58919 99.92 True relocation, scaffold gap is present, inconsistency = -34804 102916332 102919140 1065092 1062284 NC_000014.9 velvet.58919 99.96 True fake: scaffold gap size wrong estimation (local) 102913359 102916161 1068902 1066100 NC_000014.9 velvet.58919 99.89 True relocation, scaffold gap is present, inconsistency = 16249 102874911 102876627 1089385 1091443 NC_000014.9 velvet.58919 99.94 True fake: scaffold gap size wrong estimation (local) 102877879 102879390 1093875 1095386 NC_000014.9 velvet.58919 99.87 True fake: scaffold gap size wrong estimation (local) 102879557 102880101 1096045 1096589 NC_000014.9 velvet.58919 100.0 True relocation, scaffold gap is present, inconsistency = 18878 102859672 102860242 1097596 1097026 NC_000014.9 velvet.58919 100.0 True fake: scaffold gap size wrong estimation (local) 102854804 102855510 1104496 1103790 NC_000014.9 velvet.58919 99.86 True fake: scaffold gap size wrong estimation (local) 102853826 102854624 1105526 1104728 NC_000014.9 velvet.58919 100.0 True fake: scaffold gap size wrong estimation (local) 102852197 102852727 1108376 1107846 NC_000014.9 velvet.58919 100.0 True fake: scaffold gap size wrong estimation (local) 102850689 102851466 1110228 1109451 NC_000014.9 velvet.58919 100.0 True fake: scaffold gap size wrong estimation (local) 102848290 102850422 1113195 1111063 NC_000014.9 velvet.58919 97.23 True fake: scaffold gap size wrong estimation (local) 102847412 102848289 1114142 1113265 NC_000014.9 velvet.58919 98.86 True fake: scaffold gap size wrong estimation (local) 102822015 102822728 1136958 1136245 NC_000014.9 velvet.58919 100.0 True fake: scaffold gap size wrong estimation (local) 102820896 102821756 1138483 1137623 NC_000014.9 velvet.58919 100.0 True fake: scaffold gap size wrong estimation (local) 102816315 102820547 1144330 1139361 NC_000014.9 velvet.58919 99.93 True fake: scaffold gap size wrong estimation (local) 102815357 102816099 1145529 1144787 NC_000014.9 velvet.58919 99.6 True CONTIG velvet.58919 1170468 misassembled 23591155 23591768 4617 4004 NC_000014.9 velvet.58932 100.0 True fake: not a misassembly (possible transposable element) 24221849 24222798 7208 6259 NC_000014.9 velvet.58932 100.0 True fake: not a misassembly (possible transposable element) 23588423 23590436 9240 7219 NC_000014.9 velvet.58932 99.55 True fake: scaffold gap size wrong estimation (local) 23560785 23562459 36931 35257 NC_000014.9 velvet.58932 100.0 True fake: scaffold gap size wrong estimation (local) 23555259 23560612 43024 37671 NC_000014.9 velvet.58932 99.98 True fake: scaffold gap size wrong estimation (local) 23554042 23554547 45226 44721 NC_000014.9 velvet.58932 100.0 True fake: scaffold gap size wrong estimation (local) 23535865 23536857 60364 59372 NC_000014.9 velvet.58932 100.0 True fake: scaffold gap size wrong estimation (local) 23532047 23535600 64776 61223 NC_000014.9 velvet.58932 100.0 True fake: scaffold gap size wrong estimation (local) 23528179 23531800 69448 65827 NC_000014.9 velvet.58932 99.97 True relocation, scaffold gap is present, inconsistency = -2955982 26482966 26484150 70643 69459 NC_000014.9 velvet.58932 99.83 True relocation, scaffold gap is present, inconsistency = 2947726 23511055 23527895 95726 77988 NC_000014.9 velvet.58932 99.98 True fake: scaffold gap size wrong estimation (local) 23508832 23510961 98349 96220 NC_000014.9 velvet.58932 100.0 True fake: scaffold gap size wrong estimation (local) 23507251 23508542 100537 99246 NC_000014.9 velvet.58932 99.92 True fake: scaffold gap size wrong estimation (local) 23490369 23491877 111855 110297 NC_000014.9 velvet.58932 96.03 True fake: scaffold gap size wrong estimation (local) 23480375 23489283 122423 113519 NC_000014.9 velvet.58932 99.83 True fake: scaffold gap size wrong estimation (local) 23478805 23479878 124729 123661 NC_000014.9 velvet.58932 99.26 True fake: scaffold gap size wrong estimation (local) 23474040 23478710 129581 124910 NC_000014.9 velvet.58932 99.81 True fake: scaffold gap size wrong estimation (local) 23466498 23467492 132311 131317 NC_000014.9 velvet.58932 99.9 True fake: scaffold gap size wrong estimation (local) 23464226 23465032 135516 134710 NC_000014.9 velvet.58932 99.88 True CONTIG velvet.58932 138792 misassembled 91376185 91381577 26498 31894 NC_000014.9 velvet.58946 99.85 True fake: scaffold gap size wrong estimation (local) 91381864 91385710 32948 37437 NC_000014.9 velvet.58946 99.92 True fake: scaffold gap size wrong estimation (local) 91386421 91389627 38806 42012 NC_000014.9 velvet.58946 99.97 True fake: scaffold gap size wrong estimation (local) 91415752 91417714 64832 66794 NC_000014.9 velvet.58946 99.9 True fake: scaffold gap size wrong estimation (local) 91420687 91421625 71699 72637 NC_000014.9 velvet.58946 100.0 True CONTIG velvet.58946 98352 correct 25684282 25687452 451 3621 NC_000014.9 velvet.59015 99.94 True fake: scaffold gap size wrong estimation (local) 25687535 25698524 4153 16436 NC_000014.9 velvet.59015 99.95 True fake: scaffold gap size wrong estimation (local) 25698616 25701092 17292 19768 NC_000014.9 velvet.59015 99.96 True fake: scaffold gap size wrong estimation (local) 25701272 25703565 20700 22985 NC_000014.9 velvet.59015 99.47 True fake: scaffold gap size wrong estimation (local) 25704453 25714916 24644 35162 NC_000014.9 velvet.59015 99.25 True fake: scaffold gap size wrong estimation (local) 25715047 25716840 36180 37973 NC_000014.9 velvet.59015 100.0 True fake: scaffold gap size wrong estimation (local) 25721183 25722823 43314 44954 NC_000014.9 velvet.59015 99.7 True fake: scaffold gap size wrong estimation (local) 25722934 25724614 45569 47249 NC_000014.9 velvet.59015 99.94 True fake: scaffold gap size wrong estimation (local) 25724743 25727344 47970 50603 NC_000014.9 velvet.59015 99.92 True fake: scaffold gap size wrong estimation (local) 25729659 25731617 53622 55560 NC_000014.9 velvet.59015 98.72 True fake: scaffold gap size wrong estimation (local) 25732232 25734850 56996 59614 NC_000014.9 velvet.59015 99.92 True fake: scaffold gap size wrong estimation (local) 25735119 25737358 60588 62873 NC_000014.9 velvet.59015 99.81 True fake: scaffold gap size wrong estimation (local) 25739074 25739589 65358 65873 NC_000014.9 velvet.59015 97.09 True indel: stretch of mismatches 25739895 25740570 66179 66854 NC_000014.9 velvet.59015 97.93 True fake: scaffold gap size wrong estimation (local) 25742158 25743804 69189 70835 NC_000014.9 velvet.59015 99.76 True inversion, scaffold gap is present 25743817 25744977 73158 71998 NC_000014.9 velvet.59015 99.83 True relocation, scaffold gap is present, inconsistency = -62548755 88280060 88281694 85670 84036 NC_000014.9 velvet.59015 100.0 True relocation, scaffold gap is present, inconsistency = 62516196 25762153 25762993 86541 87381 NC_000014.9 velvet.59015 100.0 True fake: scaffold gap size wrong estimation (local) 25763253 25764371 87496 88598 NC_000014.9 velvet.59015 98.5 True relocation, scaffold gap is present, inconsistency = 62521742 88286884 88287670 89369 90155 NC_000014.9 velvet.59015 99.87 True local misassembly 88285412 88286781 90637 91999 NC_000014.9 velvet.59015 99.42 True relocation, scaffold gap is present, inconsistency = -62540648 25746144 25749722 92010 95584 NC_000014.9 velvet.59015 99.66 True fake: scaffold gap size wrong estimation (local) 25749993 25756163 96679 102849 NC_000014.9 velvet.59015 99.85 True relocation, scaffold gap is present, inconsistency = 62527999 88310260 88330921 128947 150390 NC_000014.9 velvet.59015 99.9 True fake: scaffold gap size wrong estimation (local) 88331210 88333849 151442 154081 NC_000014.9 velvet.59015 100.0 True fake: scaffold gap size wrong estimation (local) 88334127 88335095 155030 155998 NC_000014.9 velvet.59015 100.0 True fake: scaffold gap size wrong estimation (local) 88335178 88338374 156204 159855 NC_000014.9 velvet.59015 99.97 True relocation, scaffold gap is present, inconsistency = 25834 88305139 88309333 164127 159866 NC_000014.9 velvet.59015 99.86 True fake: scaffold gap size wrong estimation (local) 88304285 88304926 165603 164962 NC_000014.9 velvet.59015 100.0 True fake: scaffold gap size wrong estimation (local) 88302673 88304165 167293 165801 NC_000014.9 velvet.59015 99.93 True fake: scaffold gap size wrong estimation (local) 88295586 88302442 175147 168232 NC_000014.9 velvet.59015 99.9 True fake: scaffold gap size wrong estimation (local) 88293919 88295396 177430 175953 NC_000014.9 velvet.59015 100.0 True fake: scaffold gap size wrong estimation (local) 88287969 88292364 183965 179524 NC_000014.9 velvet.59015 99.93 True fake: not a misassembly (possible transposable element) 88360436 88366746 183976 190281 NC_000014.9 velvet.59015 99.86 True fake: not a misassembly (possible transposable element) 88283891 88284594 192707 192004 NC_000014.9 velvet.59015 99.72 True fake: scaffold gap size wrong estimation (local) 88281737 88283642 195076 193170 NC_000014.9 velvet.59015 99.95 True relocation, inconsistency = 62519656 25761327 25762080 195830 195077 NC_000014.9 velvet.59015 97.36 True fake: scaffold gap size wrong estimation (local) 25756171 25761326 202376 197221 NC_000014.9 velvet.59015 99.84 True relocation, scaffold gap is present, inconsistency = -62521060 88275843 88277213 203764 202394 NC_000014.9 velvet.59015 99.85 True fake: scaffold gap size wrong estimation (local) 88274550 88275619 205081 204012 NC_000014.9 velvet.59015 99.91 True local misassembly 88277215 88279357 207243 205099 NC_000014.9 velvet.59015 99.81 True fake: scaffold gap size wrong estimation (local) 88269095 88274362 212648 207254 NC_000014.9 velvet.59015 99.87 True fake: scaffold gap size wrong estimation (local) 88265952 88267338 216499 215113 NC_000014.9 velvet.59015 100.0 True fake: scaffold gap size wrong estimation (local) 88263763 88265629 219640 217774 NC_000014.9 velvet.59015 100.0 True relocation, scaffold gap is present, inconsistency = 72761 88182102 88190991 219651 228540 NC_000014.9 velvet.59015 99.99 True fake: scaffold gap size wrong estimation (local) 88191371 88195038 229724 233391 NC_000014.9 velvet.59015 99.95 True relocation, scaffold gap is present, inconsistency = 54148 88258550 88259888 244094 242755 NC_000014.9 velvet.59015 99.7 True fake: scaffold gap size wrong estimation (local) 88253860 88258290 250314 245097 NC_000014.9 velvet.59015 99.35 True fake: scaffold gap size wrong estimation (local) 88246265 88253619 259818 250999 NC_000014.9 velvet.59015 96.14 True relocation, scaffold gap is present, inconsistency = 62473789 25765034 25771302 260992 267289 NC_000014.9 velvet.59015 99.51 True fake: scaffold gap size wrong estimation (local) 25795907 25806603 289640 300403 NC_000014.9 velvet.59015 99.93 True fake: scaffold gap size wrong estimation (local) 25807790 25808321 302468 302999 NC_000014.9 velvet.59015 100.0 True fake: scaffold gap size wrong estimation (local) 25815624 25828111 306944 319498 NC_000014.9 velvet.59015 99.41 True fake: scaffold gap size wrong estimation (local) 25828399 25840921 320626 333148 NC_000014.9 velvet.59015 100.0 True fake: scaffold gap size wrong estimation (local) 25841024 25851951 333489 344417 NC_000014.9 velvet.59015 99.97 True fake: scaffold gap size wrong estimation (local) 25857673 25866261 345193 354982 NC_000014.9 velvet.59015 99.16 True fake: scaffold gap size wrong estimation (local) 25868017 25870896 357180 360128 NC_000014.9 velvet.59015 99.75 True fake: scaffold gap size wrong estimation (local) 25871193 25873908 361159 363874 NC_000014.9 velvet.59015 99.93 True fake: scaffold gap size wrong estimation (local) 25874153 25879834 364896 370556 NC_000014.9 velvet.59015 99.03 True fake: scaffold gap size wrong estimation (local) 25880141 25903950 371630 397615 NC_000014.9 velvet.59015 99.78 True fake: scaffold gap size wrong estimation (local) 25904223 25917068 398785 411717 NC_000014.9 velvet.59015 99.27 True fake: scaffold gap size wrong estimation (local) 25925245 25926608 413246 414609 NC_000014.9 velvet.59015 100.0 True relocation, scaffold gap is present, inconsistency = -8245 25918374 25924294 414620 420540 NC_000014.9 velvet.59015 99.95 True fake: scaffold gap size wrong estimation (local) 25927905 25947605 421725 441908 NC_000014.9 velvet.59015 99.96 True fake: scaffold gap size wrong estimation (local) 25948923 25954329 443919 449406 NC_000014.9 velvet.59015 98.47 True fake: scaffold gap size wrong estimation (local) 25954627 25960267 450054 456273 NC_000014.9 velvet.59015 100.0 True fake: scaffold gap size wrong estimation (local) 25985310 25991244 479626 485560 NC_000014.9 velvet.59015 99.95 True relocation, scaffold gap is present, inconsistency = 31380854 57372109 57372800 485571 486262 NC_000014.9 velvet.59015 99.57 True fake: scaffold gap size wrong estimation (local) 57373411 57376402 487726 490644 NC_000014.9 velvet.59015 97.42 True fake: scaffold gap size wrong estimation (local) 57376656 57378117 491429 492890 NC_000014.9 velvet.59015 99.86 True relocation, scaffold gap is present, inconsistency = -31381506 25996622 26000028 492901 496307 NC_000014.9 velvet.59015 99.97 True relocation, scaffold gap is present, inconsistency = -9544 25992063 25996598 497886 502608 NC_000014.9 velvet.59015 99.96 True fake: scaffold gap size wrong estimation (local) 26000080 26002473 502619 505015 NC_000014.9 velvet.59015 99.83 True fake: scaffold gap size wrong estimation (local) 26002741 26006533 505958 509750 NC_000014.9 velvet.59015 99.84 True fake: scaffold gap size wrong estimation (local) 26011997 26012925 509773 510693 NC_000014.9 velvet.59015 99.14 True relocation, scaffold gap is present, inconsistency = 56585 26069521 26076673 518312 510704 NC_000014.9 velvet.59015 99.85 True fake: scaffold gap size wrong estimation (local) 26062855 26069298 525773 519330 NC_000014.9 velvet.59015 99.78 True relocation, scaffold gap is present, inconsistency = 25783 26013983 26037061 525784 549496 NC_000014.9 velvet.59015 97.24 True inversion, scaffold gap is present 26039299 26041546 551754 549507 NC_000014.9 velvet.59015 100.0 True fake: scaffold gap size wrong estimation (local) 26037048 26039063 554864 552849 NC_000014.9 velvet.59015 99.95 True relocation, scaffold gap is present, inconsistency = -15980 26051457 26053017 556435 554875 NC_000014.9 velvet.59015 100.0 True fake: scaffold gap size wrong estimation (local) 26049276 26051228 559564 557612 NC_000014.9 velvet.59015 99.9 True relocation, scaffold gap is present, inconsistency = -11721 26053582 26060986 566979 559575 NC_000014.9 velvet.59015 99.88 True fake: scaffold gap size wrong estimation (local) 26041584 26049255 574661 566990 NC_000014.9 velvet.59015 100.0 True relocation, scaffold gap is present, inconsistency = -56344266 82379022 82385839 581494 574672 NC_000014.9 velvet.59015 99.87 True relocation, scaffold gap is present, inconsistency = 4260616 78116112 78117721 583788 582179 NC_000014.9 velvet.59015 99.88 True fake: scaffold gap size wrong estimation (local) 78114686 78115838 585975 584823 NC_000014.9 velvet.59015 100.0 True fake: scaffold gap size wrong estimation (local) 78113385 78114402 587209 586192 NC_000014.9 velvet.59015 99.8 True fake: scaffold gap size wrong estimation (local) 78110402 78113113 590996 588285 NC_000014.9 velvet.59015 99.89 True fake: scaffold gap size wrong estimation (local) 78108898 78109931 593034 592001 NC_000014.9 velvet.59015 99.42 True fake: scaffold gap size wrong estimation (local) 78102776 78104989 595747 593534 NC_000014.9 velvet.59015 99.59 True relocation, scaffold gap is present, inconsistency = -4297007 82378106 82378873 617417 616657 NC_000014.9 velvet.59015 98.83 True fake: scaffold gap size wrong estimation (local) 82376477 82377493 621843 620793 NC_000014.9 velvet.59015 95.97 True fake: scaffold gap size wrong estimation (local) 82369860 82375626 629154 623433 NC_000014.9 velvet.59015 99.06 True relocation, scaffold gap is present, inconsistency = 56355904 26012978 26013940 630144 629170 NC_000014.9 velvet.59015 99.89 True fake: scaffold gap size wrong estimation (local) 26007694 26011965 636105 630946 NC_000014.9 velvet.59015 99.76 True fake: scaffold gap size wrong estimation (local) 26006793 26007424 638947 638316 NC_000014.9 velvet.59015 99.84 True relocation, scaffold gap is present, inconsistency = 57616 26086270 26089786 660177 663720 NC_000014.9 velvet.59015 98.73 True relocation, scaffold gap is present, inconsistency = -13092 26076705 26081393 663731 668416 NC_000014.9 velvet.59015 99.81 True fake: scaffold gap size wrong estimation (extensive) 26100523 26106510 694846 700833 NC_000014.9 velvet.59015 99.88 True relocation, scaffold gap is present, inconsistency = -16733 26089788 26099841 700844 710893 NC_000014.9 velvet.59015 99.84 True fake: scaffold gap size wrong estimation (local) 26112418 26119133 719514 726208 NC_000014.9 velvet.59015 99.25 True fake: scaffold gap size wrong estimation (local) 26119313 26128632 726917 736236 NC_000014.9 velvet.59015 99.84 True fake: scaffold gap size wrong estimation (local) 26128917 26140047 737307 748476 NC_000014.9 velvet.59015 99.56 True fake: scaffold gap size wrong estimation (local) 26140249 26146298 749477 756324 NC_000014.9 velvet.59015 98.6 True fake: scaffold gap size wrong estimation (local) 26146852 26147925 757491 758565 NC_000014.9 velvet.59015 99.91 True fake: scaffold gap size wrong estimation (local) 26148750 26151601 759882 763100 NC_000014.9 velvet.59015 100.0 True fake: scaffold gap size wrong estimation (local) 26151801 26155463 763683 767881 NC_000014.9 velvet.59015 99.94 True fake: scaffold gap size wrong estimation (local) 26155678 26158990 768590 772193 NC_000014.9 velvet.59015 99.73 True fake: scaffold gap size wrong estimation (local) 26159095 26161124 772830 774858 NC_000014.9 velvet.59015 99.75 True fake: scaffold gap size wrong estimation (local) 26161625 26186250 775907 803171 NC_000014.9 velvet.59015 99.9 True fake: scaffold gap size wrong estimation (local) 26186405 26201150 804028 819596 NC_000014.9 velvet.59015 99.9 True fake: scaffold gap size wrong estimation (local) 26201413 26202959 820598 822144 NC_000014.9 velvet.59015 100.0 True relocation, scaffold gap is present, inconsistency = 37063 26249016 26252325 831138 834389 NC_000014.9 velvet.59015 98.12 True fake: not a misassembly (possible transposable element) 40887684 40889192 834400 835908 NC_000014.9 velvet.59015 99.8 True fake: not a misassembly (possible transposable element) 26252353 26253020 835909 836576 NC_000014.9 velvet.59015 100.0 True relocation, scaffold gap is present, inconsistency = 14636273 40889304 40891207 836587 838960 NC_000014.9 velvet.59015 99.34 True relocation, scaffold gap is present, inconsistency = -14665084 26227657 26228492 840494 841349 NC_000014.9 velvet.59015 97.66 True fake: scaffold gap size wrong estimation (local) 26229322 26231647 842947 845256 NC_000014.9 velvet.59015 99.3 True fake: not a misassembly (possible transposable element) 26286178 26288159 847248 845267 NC_000014.9 velvet.59015 99.8 True fake: not a misassembly (possible transposable element) 26232778 26238166 847259 852647 NC_000014.9 velvet.59015 99.87 True fake: scaffold gap size wrong estimation (local) 26261308 26267522 870358 876698 NC_000014.9 velvet.59015 99.95 True fake: not a misassembly (possible transposable element) 26253113 26253863 877451 876709 NC_000014.9 velvet.59015 98.8 True fake: not a misassembly (possible transposable element) 26267747 26268402 877462 878115 NC_000014.9 velvet.59015 99.7 True fake: scaffold gap size wrong estimation (local) 26268785 26272823 878878 883027 NC_000014.9 velvet.59015 99.93 True fake: scaffold gap size wrong estimation (local) 26300669 26302768 907255 909354 NC_000014.9 velvet.59015 99.52 True CONTIG velvet.59015 909354 misassembled 43498230 43508167 1 11015 NC_000014.9 velvet.59058 98.19 True fake: scaffold gap size wrong estimation (local) 43509453 43513824 13267 18113 NC_000014.9 velvet.59058 99.59 True fake: scaffold gap size wrong estimation (local) 43531148 43532813 32409 34074 NC_000014.9 velvet.59058 100.0 True fake: scaffold gap size wrong estimation (local) 43536730 43538945 34444 36659 NC_000014.9 velvet.59058 99.91 True local misassembly 43534747 43536698 36660 38611 NC_000014.9 velvet.59058 99.9 True fake: scaffold gap size wrong estimation (local) 43538997 43540643 38622 40268 NC_000014.9 velvet.59058 99.94 True fake: scaffold gap size wrong estimation (local) 43540980 43542519 40724 42263 NC_000014.9 velvet.59058 99.87 True fake: scaffold gap size wrong estimation (local) 43542849 43546064 43362 46577 NC_000014.9 velvet.59058 99.91 True fake: scaffold gap size wrong estimation (local) 43546294 43553078 47599 55121 NC_000014.9 velvet.59058 99.45 True fake: scaffold gap size wrong estimation (local) 43559768 43561177 65871 67280 NC_000014.9 velvet.59058 100.0 True fake: not a misassembly (possible transposable element) 74215362 74216400 67291 68329 NC_000014.9 velvet.59058 99.62 True fake: not a misassembly (possible transposable element) 43564076 43566262 69193 71379 NC_000014.9 velvet.59058 100.0 True relocation, scaffold gap is present, inconsistency = 30651347 74217620 74223495 71390 77265 NC_000014.9 velvet.59058 99.81 True fake: scaffold gap size wrong estimation (local) 74223697 74224900 78314 79517 NC_000014.9 velvet.59058 100.0 True fake: scaffold gap size wrong estimation (local) 74225890 74227032 81039 82181 NC_000014.9 velvet.59058 99.83 True fake: scaffold gap size wrong estimation (local) 74227278 74228556 82927 84205 NC_000014.9 velvet.59058 100.0 True inversion, scaffold gap is present 74232858 74233719 87325 86464 NC_000014.9 velvet.59058 100.0 True fake: scaffold gap size wrong estimation (local) 74230028 74231379 90902 89551 NC_000014.9 velvet.59058 99.93 True inversion, scaffold gap is present 74242650 74244898 96081 98329 NC_000014.9 velvet.59058 99.91 True fake: scaffold gap size wrong estimation (local) 74245039 74248284 99336 102646 NC_000014.9 velvet.59058 99.94 True relocation, scaffold gap is present, inconsistency = -14104 74234191 74235917 102657 104383 NC_000014.9 velvet.59058 100.0 True fake: scaffold gap size wrong estimation (extensive) 74248725 74249325 107895 108495 NC_000014.9 velvet.59058 98.17 True fake: scaffold gap size wrong estimation (local) 74251458 74252407 111326 112275 NC_000014.9 velvet.59058 99.58 True fake: scaffold gap size wrong estimation (local) 74255072 74256173 115854 116955 NC_000014.9 velvet.59058 100.0 True fake: scaffold gap size wrong estimation (local) 74256985 74257606 117818 118439 NC_000014.9 velvet.59058 99.68 True fake: scaffold gap size wrong estimation (local) 74257747 74262861 119350 124465 NC_000014.9 velvet.59058 99.92 True fake: scaffold gap size wrong estimation (local) 74263104 74264257 125487 126640 NC_000014.9 velvet.59058 100.0 True fake: scaffold gap size wrong estimation (extensive) 74287597 74288867 142582 143852 NC_000014.9 velvet.59058 100.0 True fake: scaffold gap size wrong estimation (local) 74289147 74290704 144426 145983 NC_000014.9 velvet.59058 99.94 True fake: scaffold gap size wrong estimation (local) 74290951 74294069 146900 150018 NC_000014.9 velvet.59058 100.0 True fake: scaffold gap size wrong estimation (local) 74294357 74298317 151118 155143 NC_000014.9 velvet.59058 99.97 True fake: scaffold gap size wrong estimation (local) 74298573 74299803 156198 157428 NC_000014.9 velvet.59058 100.0 True relocation, scaffold gap is present, inconsistency = 5490268 68804236 68805772 161539 159961 NC_000014.9 velvet.59058 100.0 True relocation, scaffold gap is present, inconsistency = 5469520 74276484 74277087 162731 163334 NC_000014.9 velvet.59058 99.83 True fake: scaffold gap size wrong estimation (local) 74283142 74283852 164999 165709 NC_000014.9 velvet.59058 100.0 True local misassembly 74284387 74285112 165710 166435 NC_000014.9 velvet.59058 98.48 True fake: scaffold gap size wrong estimation (local) 74285113 74287312 167671 169870 NC_000014.9 velvet.59058 98.68 True relocation, scaffold gap is present, inconsistency = -10484842 63810258 63810894 177658 178294 NC_000014.9 velvet.59058 100.0 True fake: scaffold gap size wrong estimation (local) 63812881 63813539 181193 181851 NC_000014.9 velvet.59058 99.85 True relocation, scaffold gap is present, inconsistency = 10495411 74308961 74310144 181862 183045 NC_000014.9 velvet.59058 99.92 True fake: scaffold gap size wrong estimation (local) 74314704 74315259 189216 189771 NC_000014.9 velvet.59058 99.82 True local misassembly 74313041 74314413 192251 193620 NC_000014.9 velvet.59058 99.78 True relocation, scaffold gap is present, inconsistency = 5536047 68775314 68776983 195300 193631 NC_000014.9 velvet.59058 99.94 True fake: scaffold gap size wrong estimation (local) 68769693 68772377 198081 195456 NC_000014.9 velvet.59058 97.76 True local misassembly 68774660 68775282 199249 198627 NC_000014.9 velvet.59058 99.84 True fake: scaffold gap size wrong estimation (local) 68768188 68769426 200498 199260 NC_000014.9 velvet.59058 97.42 True fake: scaffold gap size wrong estimation (local) 68766297 68768187 205002 203112 NC_000014.9 velvet.59058 100.0 True fake: scaffold gap size wrong estimation (local) 68765317 68766014 206718 206021 NC_000014.9 velvet.59058 100.0 True relocation, scaffold gap is present, inconsistency = 16820782 51900074 51901294 249959 251179 NC_000014.9 velvet.59058 99.92 True fake: scaffold gap size wrong estimation (local) 51901385 51902644 251307 252613 NC_000014.9 velvet.59058 99.84 True CONTIG velvet.59058 252767 misassembled 82359797 82361274 1 1478 NC_000014.9 velvet.59064 99.93 True CONTIG velvet.59064 1478 correct CONTIG velvet.59126 363 unaligned 30717894 30723932 6189 1 NC_000014.9 velvet.59128 99.97 True fake: scaffold gap size wrong estimation (local) 30715539 30717249 9355 7645 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 30714362 30715286 10675 9751 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 30710333 30714059 15432 11716 NC_000014.9 velvet.59128 98.19 True fake: scaffold gap size wrong estimation (local) 30705612 30708359 20833 18086 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 30703974 30705484 22957 21447 NC_000014.9 velvet.59128 100.0 True relocation, scaffold gap is present, inconsistency = -5251330 35954088 35955293 24173 22968 NC_000014.9 velvet.59128 99.92 True fake: scaffold gap size wrong estimation (local) 35951650 35953957 27239 24932 NC_000014.9 velvet.59128 100.0 True relocation, scaffold gap is present, inconsistency = 5250324 30700644 30701315 27921 27250 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 30695756 30700390 33274 28640 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 30692035 30695586 37789 34238 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 30690804 30691929 39949 38824 NC_000014.9 velvet.59128 100.0 True relocation, scaffold gap is present, inconsistency = -19626 30708412 30710324 41967 40055 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 30681223 30684716 71293 67800 NC_000014.9 velvet.59128 99.97 True fake: scaffold gap size wrong estimation (local) 30678109 30680955 75312 72421 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 30674592 30677821 79634 76405 NC_000014.9 velvet.59128 99.97 True fake: scaffold gap size wrong estimation (local) 30672015 30674360 82931 80586 NC_000014.9 velvet.59128 100.0 True relocation, scaffold gap is present, inconsistency = -5247799 35914533 35919803 88212 82942 NC_000014.9 velvet.59128 99.94 True fake: scaffold gap size wrong estimation (local) 35913085 35913914 89913 89084 NC_000014.9 velvet.59128 99.88 True fake: scaffold gap size wrong estimation (local) 35910273 35912539 93502 91236 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 35909424 35910113 94856 94167 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 35907547 35908788 97309 96068 NC_000014.9 velvet.59128 99.19 True local misassembly 35906388 35907227 98149 97310 NC_000014.9 velvet.59128 99.88 True fake: scaffold gap size wrong estimation (local) 35901965 35902660 98970 98275 NC_000014.9 velvet.59128 100.0 True local misassembly 35902810 35905818 102466 99458 NC_000014.9 velvet.59128 99.97 True relocation, scaffold gap is present, inconsistency = 5230854 30669028 30671945 105394 102477 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 30658651 30663959 120789 115218 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 30656117 30658375 124017 121770 NC_000014.9 velvet.59128 99.51 True fake: scaffold gap size wrong estimation (local) 30631969 30639082 144196 137028 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 30630394 30631071 146563 145886 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 30627784 30629577 149745 147953 NC_000014.9 velvet.59128 99.94 True fake: scaffold gap size wrong estimation (local) 30620900 30627460 157993 150870 NC_000014.9 velvet.59128 98.88 True fake: scaffold gap size wrong estimation (local) 30612834 30620633 166311 158512 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 30610457 30612582 169441 167260 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 30605169 30610348 175179 169889 NC_000014.9 velvet.59128 98.64 True fake: scaffold gap size wrong estimation (local) 30603328 30604871 177808 176265 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 30599497 30603050 182190 178695 NC_000014.9 velvet.59128 98.36 True fake: scaffold gap size wrong estimation (local) 30598338 30599225 183810 182923 NC_000014.9 velvet.59128 99.89 True fake: scaffold gap size wrong estimation (local) 30595049 30598080 187676 184584 NC_000014.9 velvet.59128 99.97 True fake: scaffold gap size wrong estimation (local) 30585111 30594404 198402 189109 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 30581629 30584816 202572 199385 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 30580474 30581482 204240 203232 NC_000014.9 velvet.59128 100.0 True relocation, scaffold gap is present, inconsistency = -5257605 35835783 35836336 206536 205983 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 35832495 35835562 210606 207465 NC_000014.9 velvet.59128 99.93 True fake: scaffold gap size wrong estimation (local) 35831028 35832219 212583 211392 NC_000014.9 velvet.59128 100.0 True relocation, scaffold gap is present, inconsistency = 5247954 30577229 30580251 218428 215406 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 30575178 30575779 221256 220678 NC_000014.9 velvet.59128 95.44 True fake: scaffold gap size wrong estimation (local) 30565931 30574408 231425 222827 NC_000014.9 velvet.59128 99.66 True fake: scaffold gap size wrong estimation (local) 30563991 30565641 233839 232218 NC_000014.9 velvet.59128 98.23 True fake: scaffold gap size wrong estimation (local) 30556547 30557894 237566 236013 NC_000014.9 velvet.59128 100.0 True relocation, scaffold gap is present, inconsistency = -9010 30563161 30563690 239962 239433 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 30555242 30556419 241150 239973 NC_000014.9 velvet.59128 99.15 True fake: scaffold gap size wrong estimation (local) 30552880 30554296 244050 242634 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 30549741 30552791 247945 244895 NC_000014.9 velvet.59128 99.97 True fake: scaffold gap size wrong estimation (local) 30548723 30549482 249814 249055 NC_000014.9 velvet.59128 100.0 True relocation, scaffold gap is present, inconsistency = -31950986 62498481 62499698 251059 249825 NC_000014.9 velvet.59128 98.54 True fake: scaffold gap size wrong estimation (extensive) 62496695 62497815 262136 261016 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 62495428 62496566 263384 262246 NC_000014.9 velvet.59128 100.0 True relocation, scaffold gap is present, inconsistency = 31949306 30517529 30525244 291977 284262 NC_000014.9 velvet.59128 99.99 True fake: not a misassembly (possible transposable element) 30505580 30509859 292936 297214 NC_000014.9 velvet.59128 99.86 True fake: not a misassembly (possible transposable element) 30514838 30515968 298355 297225 NC_000014.9 velvet.59128 99.91 True relocation, scaffold gap is present, inconsistency = 17311 30493212 30495198 300684 302670 NC_000014.9 velvet.59128 99.45 True fake: scaffold gap size wrong estimation (local) 30495490 30505283 303688 313481 NC_000014.9 velvet.59128 99.93 True fake: scaffold gap size wrong estimation (extensive) 30530072 30532686 330193 332807 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 30532687 30533730 332866 333909 NC_000014.9 velvet.59128 99.62 True fake: scaffold gap size wrong estimation (local) 30533731 30534830 334364 335463 NC_000014.9 velvet.59128 95.18 True fake: scaffold gap size wrong estimation (local) 30535103 30535633 337654 338184 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 30535919 30538631 339136 341848 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 30538930 30544380 342570 348685 NC_000014.9 velvet.59128 99.98 True fake: scaffold gap size wrong estimation (local) 30544609 30545548 349727 350666 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 30545549 30546258 350707 351416 NC_000014.9 velvet.59128 99.15 True fake: scaffold gap size wrong estimation (local) 30548017 30548636 353977 354596 NC_000014.9 velvet.59128 100.0 True relocation, scaffold gap is present, inconsistency = 26528640 57098703 57099743 376023 377062 NC_000014.9 velvet.59128 99.62 True relocation, scaffold gap is present, inconsistency = 12175670 69276713 69277260 378362 378909 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 69278290 69278962 380070 380742 NC_000014.9 velvet.59128 98.51 True fake: scaffold gap size wrong estimation (extensive) 69286607 69289786 381219 384360 NC_000014.9 velvet.59128 98.68 True fake: scaffold gap size wrong estimation (local) 69290040 69293912 385281 389207 NC_000014.9 velvet.59128 98.37 True fake: scaffold gap size wrong estimation (local) 69294424 69295160 390578 391314 NC_000014.9 velvet.59128 100.0 True relocation, scaffold gap is present, inconsistency = -12155272 57139899 57141304 391325 392730 NC_000014.9 velvet.59128 99.5 True fake: scaffold gap size wrong estimation (local) 57141305 57142996 393883 395574 NC_000014.9 velvet.59128 99.41 True fake: scaffold gap size wrong estimation (local) 57143118 57145468 395658 398693 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 57145752 57150095 399722 404065 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 57150403 57165078 405055 420337 NC_000014.9 velvet.59128 99.71 True fake: scaffold gap size wrong estimation (local) 57165181 57166137 421026 421982 NC_000014.9 velvet.59128 100.0 True relocation, scaffold gap is present, inconsistency = 12252669 69422066 69422637 425242 425813 NC_000014.9 velvet.59128 99.3 True local misassembly 69422826 69423693 425875 426742 NC_000014.9 velvet.59128 98.85 True fake: scaffold gap size wrong estimation (local) 69423816 69427023 427653 430961 NC_000014.9 velvet.59128 98.09 True fake: scaffold gap size wrong estimation (local) 69427307 69428026 431873 432592 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 69428306 69429556 433009 434259 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 69429693 69430648 434779 435734 NC_000014.9 velvet.59128 100.0 True relocation, scaffold gap is present, inconsistency = 16055 69448215 69449399 438430 437246 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 69446956 69447629 440048 439375 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 69443968 69446201 443562 441329 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 69440934 69443603 447489 444769 NC_000014.9 velvet.59128 100.0 True relocation, scaffold gap is present, inconsistency = 81091 69356856 69359832 447500 450476 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 69360580 69361759 452171 453350 NC_000014.9 velvet.59128 100.0 True relocation, scaffold gap is present, inconsistency = 71468 69436132 69436947 457070 456255 NC_000014.9 velvet.59128 98.77 True fake: scaffold gap size wrong estimation (local) 69434421 69435674 458505 457252 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 69432164 69433838 461702 460028 NC_000014.9 velvet.59128 99.94 True fake: scaffold gap size wrong estimation (local) 69430872 69431540 464293 463582 NC_000014.9 velvet.59128 100.0 True relocation, scaffold gap is present, inconsistency = 103532 69323020 69327121 464512 468613 NC_000014.9 velvet.59128 99.83 True fake: scaffold gap size wrong estimation (local) 69327348 69329110 469546 471308 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 69329208 69336221 471384 478953 NC_000014.9 velvet.59128 99.96 True fake: scaffold gap size wrong estimation (local) 69336973 69340501 480560 484088 NC_000014.9 velvet.59128 99.94 True fake: scaffold gap size wrong estimation (local) 69340790 69342211 484958 486379 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 69342327 69346007 487019 490694 NC_000014.9 velvet.59128 99.67 True fake: scaffold gap size wrong estimation (local) 69346177 69349960 491676 495459 NC_000014.9 velvet.59128 99.97 True fake: scaffold gap size wrong estimation (local) 69350215 69356455 496524 502765 NC_000014.9 velvet.59128 99.97 True fake: scaffold gap size wrong estimation (local) 69361820 69365694 503240 507108 NC_000014.9 velvet.59128 99.64 True fake: scaffold gap size wrong estimation (local) 69393328 69393897 531758 532327 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 69394588 69396349 533466 535527 NC_000014.9 velvet.59128 99.94 True fake: scaffold gap size wrong estimation (local) 69396561 69397670 535971 537123 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 69403124 69403788 537434 538098 NC_000014.9 velvet.59128 100.0 True relocation, scaffold gap is present, inconsistency = -31140 69372659 69373836 538109 539286 NC_000014.9 velvet.59128 100.0 True fake: not a misassembly (possible transposable element) 80376411 80379414 542300 539297 NC_000014.9 velvet.59128 99.9 True fake: not a misassembly (possible transposable element) 69376205 69377565 542311 543671 NC_000014.9 velvet.59128 100.0 True local misassembly 69374083 69375900 543682 545499 NC_000014.9 velvet.59128 100.0 True fake: not a misassembly (possible transposable element) 80374672 80376126 546964 545510 NC_000014.9 velvet.59128 99.86 True fake: not a misassembly (possible transposable element) 69381994 69382588 547006 547600 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 69382826 69383936 548268 549378 NC_000014.9 velvet.59128 100.0 True local misassembly 69377845 69378967 549709 550831 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 69381282 69381877 550842 551424 NC_000014.9 velvet.59128 97.82 True fake: scaffold gap size wrong estimation (local) 69383968 69387710 553171 557029 NC_000014.9 velvet.59128 100.0 True relocation, scaffold gap is present, inconsistency = 10968334 80356055 80359941 561451 557040 NC_000014.9 velvet.59128 99.17 True fake: scaffold gap size wrong estimation (local) 80354757 80355886 563567 562438 NC_000014.9 velvet.59128 99.73 True relocation, scaffold gap is present, inconsistency = 10943938 69408283 69410808 566380 563578 NC_000014.9 velvet.59128 100.0 True relocation, scaffold gap is present, inconsistency = 8248 69397913 69399859 566556 568502 NC_000014.9 velvet.59128 100.0 True inversion, scaffold gap is present 69404043 69406540 571767 569203 NC_000014.9 velvet.59128 97.0 True relocation, scaffold gap is present, inconsistency = 12176 69389318 69389834 573800 574316 NC_000014.9 velvet.59128 98.07 True indel: indel (<= 5bp) 69389838 69391428 574317 575907 NC_000014.9 velvet.59128 100.0 True fake: scaffold gap size wrong estimation (local) 69391689 69392223 577314 577848 NC_000014.9 velvet.59128 100.0 True local misassembly 69392485 69393069 577849 578433 NC_000014.9 velvet.59128 98.29 True relocation, scaffold gap is present, inconsistency = 17282 69431604 69432166 599686 600228 NC_000014.9 velvet.59128 95.5 True relocation, scaffold gap is present, inconsistency = 59002 69365747 69371253 607186 601577 NC_000014.9 velvet.59128 99.84 True relocation, scaffold gap is present, inconsistency = -10952025 80316366 80317654 608592 607304 NC_000014.9 velvet.59128 100.0 True CONTIG velvet.59128 608592 misassembled 25555238 25558477 14121 17360 NC_000014.9 velvet.59250 99.75 True fake: scaffold gap size wrong estimation (local) 25558691 25562672 18376 22447 NC_000014.9 velvet.59250 99.9 True fake: scaffold gap size wrong estimation (local) 25563877 25564904 24519 25541 NC_000014.9 velvet.59250 98.64 True relocation, scaffold gap is present, inconsistency = 8018 25545442 25555139 35958 26261 NC_000014.9 velvet.59250 99.76 True fake: scaffold gap size wrong estimation (local) 25536813 25545287 45375 36901 NC_000014.9 velvet.59250 99.91 True fake: scaffold gap size wrong estimation (local) 25534144 25536596 48834 46382 NC_000014.9 velvet.59250 99.88 True relocation, scaffold gap is present, inconsistency = 56104 25594201 25597653 50335 53787 NC_000014.9 velvet.59250 100.0 True relocation, scaffold gap is present, inconsistency = 11892895 37490559 37491389 53798 54628 NC_000014.9 velvet.59250 99.64 True relocation, scaffold gap is present, inconsistency = 11964828 25502467 25514087 77955 66272 NC_000014.9 velvet.59250 99.21 True fake: scaffold gap size wrong estimation (local) 25487543 25493096 87022 81469 NC_000014.9 velvet.59250 99.98 True relocation, scaffold gap is present, inconsistency = -8814 25493317 25496109 90062 87270 NC_000014.9 velvet.59250 99.96 True relocation, scaffold gap is present, inconsistency = -13671724 39164419 39165030 90681 90073 NC_000014.9 velvet.59250 99.18 True fake: not a misassembly (possible transposable element) 39163329 39164275 91640 92586 NC_000014.9 velvet.59250 99.89 True fake: not a misassembly (possible transposable element) 39160381 39163088 95308 92597 NC_000014.9 velvet.59250 99.74 True relocation, scaffold gap is present, inconsistency = 13596703 25562692 25563667 95319 96294 NC_000014.9 velvet.59250 99.49 True relocation, scaffold gap is present, inconsistency = 44399029 69962843 69964363 97961 96441 NC_000014.9 velvet.59250 99.34 True relocation, scaffold gap is present, inconsistency = 30802165 39158480 39159829 100104 98810 NC_000014.9 velvet.59250 95.82 True inversion, scaffold gap is present 39166301 39167715 100115 101529 NC_000014.9 velvet.59250 99.93 True fake: scaffold gap size wrong estimation (local) 39168247 39170595 102877 105226 NC_000014.9 velvet.59250 99.91 True relocation, scaffold gap is present, inconsistency = 9792 39157767 39158444 105914 105237 NC_000014.9 velvet.59250 99.85 True relocation, scaffold gap is present, inconsistency = 13656446 25498013 25500956 106279 109221 NC_000014.9 velvet.59250 99.9 True relocation, scaffold gap is present, inconsistency = 13677039 39178890 39179636 110116 110862 NC_000014.9 velvet.59250 100.0 True fake: scaffold gap size wrong estimation (local) 39179933 39183670 111753 115490 NC_000014.9 velvet.59250 99.97 True fake: scaffold gap size wrong estimation (local) 39185212 39185868 117804 118460 NC_000014.9 velvet.59250 98.33 True fake: scaffold gap size wrong estimation (local) 39186819 39187368 120736 121285 NC_000014.9 velvet.59250 100.0 True local misassembly 39187639 39188928 121286 122575 NC_000014.9 velvet.59250 99.07 True fake: scaffold gap size wrong estimation (local) 39190429 39193647 125034 128252 NC_000014.9 velvet.59250 97.89 True fake: scaffold gap size wrong estimation (local) 39196984 39197608 132760 133384 NC_000014.9 velvet.59250 100.0 True relocation, scaffold gap is present, inconsistency = -13697171 25500979 25502477 133926 135424 NC_000014.9 velvet.59250 99.93 True relocation, scaffold gap is present, inconsistency = 44383387 69885875 69895848 135435 145475 NC_000014.9 velvet.59250 99.92 True relocation, scaffold gap is present, inconsistency = 37924 69933783 69947011 158674 145486 NC_000014.9 velvet.59250 99.47 True fake: scaffold gap size wrong estimation (local) 69927619 69933573 165652 159652 NC_000014.9 velvet.59250 99.87 True fake: scaffold gap size wrong estimation (local) 69926049 69927403 168095 166741 NC_000014.9 velvet.59250 99.93 True inversion, scaffold gap is present 69918528 69923008 168106 172584 NC_000014.9 velvet.59250 99.91 True fake: scaffold gap size wrong estimation (local) 69923245 69924786 173679 175220 NC_000014.9 velvet.59250 99.74 True local misassembly 69925085 69926058 175300 176273 NC_000014.9 velvet.59250 99.9 True inversion, scaffold gap is present 69915129 69918215 179370 176284 NC_000014.9 velvet.59250 99.77 True fake: scaffold gap size wrong estimation (local) 69903904 69914935 191558 180404 NC_000014.9 velvet.59250 99.82 True fake: scaffold gap size wrong estimation (local) 69899500 69902598 196726 193628 NC_000014.9 velvet.59250 99.87 True fake: scaffold gap size wrong estimation (local) 69895883 69899385 200655 196949 NC_000014.9 velvet.59250 99.83 True relocation, scaffold gap is present, inconsistency = 20938753 48955707 48957119 202078 200666 NC_000014.9 velvet.59250 100.0 True relocation, scaffold gap is present, inconsistency = 20997069 69954294 69956461 202184 204351 NC_000014.9 velvet.59250 100.0 True relocation, scaffold gap is present, inconsistency = -11305 69947140 69954264 206335 213430 NC_000014.9 velvet.59250 99.57 True fake: scaffold gap size wrong estimation (local) 69956484 69961244 216661 221483 NC_000014.9 velvet.59250 98.34 True fake: scaffold gap size wrong estimation (local) 69961590 69962218 222281 222909 NC_000014.9 velvet.59250 100.0 True relocation, scaffold gap is present, inconsistency = 21019381 48941371 48942198 223747 222920 NC_000014.9 velvet.59250 100.0 True fake: scaffold gap size wrong estimation (local) 48938982 48940656 226551 224877 NC_000014.9 velvet.59250 100.0 True fake: scaffold gap size wrong estimation (local) 48936207 48938374 231269 229105 NC_000014.9 velvet.59250 99.86 True fake: scaffold gap size wrong estimation (local) 48928196 48935940 241153 232435 NC_000014.9 velvet.59250 98.96 True relocation, scaffold gap is present, inconsistency = -54056804 102983527 102984989 242626 241164 NC_000014.9 velvet.59250 100.0 True fake: scaffold gap size wrong estimation (local) 102975483 102977056 245929 244356 NC_000014.9 velvet.59250 99.94 True fake: scaffold gap size wrong estimation (local) 102968149 102972403 255168 250914 NC_000014.9 velvet.59250 99.95 True fake: scaffold gap size wrong estimation (local) 102951743 102955137 269319 265925 NC_000014.9 velvet.59250 99.94 True fake: scaffold gap size wrong estimation (local) 102950958 102951503 270458 269913 NC_000014.9 velvet.59250 100.0 True fake: scaffold gap size wrong estimation (local) 102948640 102950709 273289 271220 NC_000014.9 velvet.59250 99.9 True fake: scaffold gap size wrong estimation (local) 102946316 102948176 276395 274535 NC_000014.9 velvet.59250 99.95 True fake: scaffold gap size wrong estimation (local) 102943132 102946017 280341 277456 NC_000014.9 velvet.59250 99.9 True fake: scaffold gap size wrong estimation (local) 102939215 102942596 285093 281714 NC_000014.9 velvet.59250 99.91 True relocation, scaffold gap is present, inconsistency = 32929695 69985518 70008141 286472 309285 NC_000014.9 velvet.59250 99.83 True fake: scaffold gap size wrong estimation (local) 70008232 70043492 310112 346008 NC_000014.9 velvet.59250 99.31 True fake: scaffold gap size wrong estimation (local) 70052634 70066487 352480 367022 NC_000014.9 velvet.59250 99.83 True fake: scaffold gap size wrong estimation (local) 70072950 70079220 371012 377282 NC_000014.9 velvet.59250 99.95 True fake: scaffold gap size wrong estimation (local) 70079512 70086387 378382 385351 NC_000014.9 velvet.59250 99.84 True fake: scaffold gap size wrong estimation (local) 70086643 70095927 386387 395671 NC_000014.9 velvet.59250 99.86 True fake: scaffold gap size wrong estimation (local) 70096187 70097300 396674 397787 NC_000014.9 velvet.59250 99.82 True fake: scaffold gap size wrong estimation (local) 70108431 70109210 408207 408986 NC_000014.9 velvet.59250 99.74 True fake: scaffold gap size wrong estimation (local) 70109736 70110334 409502 410100 NC_000014.9 velvet.59250 99.83 True relocation, scaffold gap is present, inconsistency = 18735713 88846299 88847869 410352 411922 NC_000014.9 velvet.59250 100.0 True fake: scaffold gap size wrong estimation (local) 88848155 88855826 412795 421111 NC_000014.9 velvet.59250 98.69 True relocation, scaffold gap is present, inconsistency = -18758635 70097319 70105074 421239 428993 NC_000014.9 velvet.59250 99.87 True relocation, scaffold gap is present, inconsistency = 18754662 88859940 88860822 429197 430079 NC_000014.9 velvet.59250 100.0 True local misassembly 88861066 88862551 430080 431565 NC_000014.9 velvet.59250 98.99 True fake: scaffold gap size wrong estimation (local) 88862718 88865464 432590 435336 NC_000014.9 velvet.59250 100.0 True fake: not a misassembly (possible transposable element) 70105367 70108299 435347 438279 NC_000014.9 velvet.59250 99.93 True fake: not a misassembly (possible transposable element) 88865687 88871829 438290 444451 NC_000014.9 velvet.59250 99.68 True fake: scaffold gap size wrong estimation (local) 88872069 88879679 445470 453861 NC_000014.9 velvet.59250 99.97 True fake: scaffold gap size wrong estimation (local) 88879978 88881152 455060 456234 NC_000014.9 velvet.59250 99.91 True relocation, scaffold gap is present, inconsistency = -18771243 70111261 70113916 457586 460241 NC_000014.9 velvet.59250 99.77 True fake: scaffold gap size wrong estimation (local) 70113917 70116347 460466 462896 NC_000014.9 velvet.59250 99.01 True fake: scaffold gap size wrong estimation (local) 70116348 70119191 463003 465846 NC_000014.9 velvet.59250 99.12 True indel: indel (<= 5bp) 70119192 70122817 465848 469473 NC_000014.9 velvet.59250 100.0 True fake: scaffold gap size wrong estimation (local) 70126904 70135413 469777 478286 NC_000014.9 velvet.59250 99.93 True fake: scaffold gap size wrong estimation (local) 70135641 70137161 478523 480043 NC_000014.9 velvet.59250 99.47 True fake: scaffold gap size wrong estimation (local) 70137439 70144328 481030 487920 NC_000014.9 velvet.59250 99.93 True fake: scaffold gap size wrong estimation (local) 70144652 70151002 488997 495347 NC_000014.9 velvet.59250 99.94 True fake: scaffold gap size wrong estimation (local) 70151293 70154935 496228 500304 NC_000014.9 velvet.59250 99.56 True fake: scaffold gap size wrong estimation (local) 70155154 70159161 501292 505299 NC_000014.9 velvet.59250 99.98 True fake: scaffold gap size wrong estimation (local) 70159333 70160131 506116 506883 NC_000014.9 velvet.59250 95.94 True fake: scaffold gap size wrong estimation (local) 70161324 70171557 508580 518915 NC_000014.9 velvet.59250 99.85 True fake: scaffold gap size wrong estimation (local) 70171813 70175751 519936 523918 NC_000014.9 velvet.59250 99.54 True fake: scaffold gap size wrong estimation (local) 70175988 70184978 524930 534668 NC_000014.9 velvet.59250 99.75 True fake: scaffold gap size wrong estimation (local) 70185268 70187288 535602 537646 NC_000014.9 velvet.59250 97.7 True fake: scaffold gap size wrong estimation (local) 70187681 70194230 538799 545386 NC_000014.9 velvet.59250 98.58 True fake: scaffold gap size wrong estimation (local) 70200110 70202973 553263 556126 NC_000014.9 velvet.59250 99.93 True fake: scaffold gap size wrong estimation (local) 70221854 70223351 573098 574595 NC_000014.9 velvet.59250 99.93 True fake: scaffold gap size wrong estimation (local) 70223554 70228523 575605 581200 NC_000014.9 velvet.59250 98.4 True relocation, scaffold gap is present, inconsistency = -25467 70203067 70206586 581211 584784 NC_000014.9 velvet.59250 97.44 True fake: scaffold gap size wrong estimation (local) 70206872 70209219 585768 588172 NC_000014.9 velvet.59250 99.66 True fake: scaffold gap size wrong estimation (local) 70211815 70213775 590254 592214 NC_000014.9 velvet.59250 99.29 True local misassembly 70210765 70211369 593280 593884 NC_000014.9 velvet.59250 99.83 True fake: scaffold gap size wrong estimation (local) 70213789 70215095 593895 595201 NC_000014.9 velvet.59250 99.85 True fake: scaffold gap size wrong estimation (local) 70215374 70216066 595880 596572 NC_000014.9 velvet.59250 99.86 True local misassembly 70216219 70220341 596865 601616 NC_000014.9 velvet.59250 99.9 True fake: scaffold gap size wrong estimation (extensive) 70233043 70233847 607164 607968 NC_000014.9 velvet.59250 99.75 True relocation, scaffold gap is present, inconsistency = -8085 70230626 70232753 612832 614958 NC_000014.9 velvet.59250 99.67 True fake: scaffold gap size wrong estimation (local) 70233925 70235333 617037 618449 NC_000014.9 velvet.59250 99.36 True fake: scaffold gap size wrong estimation (local) 70236620 70238165 620673 622218 NC_000014.9 velvet.59250 99.48 True fake: scaffold gap size wrong estimation (local) 70238167 70238726 625303 625862 NC_000014.9 velvet.59250 100.0 True fake: scaffold gap size wrong estimation (local) 70269359 70270824 655995 657460 NC_000014.9 velvet.59250 100.0 True CONTIG velvet.59250 657551 misassembled 34598646 34599350 712 1 NC_000014.9 velvet.59308 99.86 True fake: scaffold gap size wrong estimation (local) 34595407 34595932 8036 7511 NC_000014.9 velvet.59308 100.0 True local misassembly 34596934 34597936 9049 8047 NC_000014.9 velvet.59308 100.0 True relocation, scaffold gap is present, inconsistency = 32971374 67592296 67592816 32035 32555 NC_000014.9 velvet.59308 100.0 True fake: scaffold gap size wrong estimation (local) 67595223 67596202 35778 36758 NC_000014.9 velvet.59308 99.69 True fake: scaffold gap size wrong estimation (local) 67596432 67597223 37062 37853 NC_000014.9 velvet.59308 99.75 True fake: scaffold gap size wrong estimation (local) 67597774 67598727 38111 39064 NC_000014.9 velvet.59308 99.58 True fake: not a misassembly (possible transposable element) 67686639 67687436 39874 39077 NC_000014.9 velvet.59308 99.75 True fake: not a misassembly (possible transposable element) 67598999 67600702 41753 43456 NC_000014.9 velvet.59308 99.65 True fake: scaffold gap size wrong estimation (local) 67600883 67601651 43734 44502 NC_000014.9 velvet.59308 99.48 True CONTIG velvet.59308 44502 misassembled 69136388 69139220 4612 1308 NC_000014.9 velvet.59334 100.0 True inversion, scaffold gap is present 69162861 69163396 25772 26307 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 69176435 69177613 33006 34184 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 69178007 69178532 34542 35067 NC_000014.9 velvet.59334 100.0 True local misassembly 69178681 69179278 35340 35937 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 69179608 69180498 37225 38115 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 69181125 69182073 38499 39447 NC_000014.9 velvet.59334 95.68 True fake: scaffold gap size wrong estimation (local) 69182646 69184994 40950 43209 NC_000014.9 velvet.59334 96.0 True fake: scaffold gap size wrong estimation (local) 69188825 69190027 46180 47382 NC_000014.9 velvet.59334 99.92 True fake: scaffold gap size wrong estimation (local) 69190113 69190974 47510 48371 NC_000014.9 velvet.59334 99.88 True fake: scaffold gap size wrong estimation (local) 69191087 69193075 49252 51238 NC_000014.9 velvet.59334 99.7 True fake: scaffold gap size wrong estimation (local) 69193359 69194115 52007 52763 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 69195491 69196637 54604 55750 NC_000014.9 velvet.59334 99.74 True fake: not a misassembly (possible transposable element) 69186994 69187871 58686 59563 NC_000014.9 velvet.59334 100.0 True fake: not a misassembly (possible transposable element) 69216566 69217426 73878 74738 NC_000014.9 velvet.59334 99.88 True fake: scaffold gap size wrong estimation (local) 69219368 69220216 77409 78257 NC_000014.9 velvet.59334 99.88 True fake: scaffold gap size wrong estimation (local) 69221169 69221721 78614 79166 NC_000014.9 velvet.59334 99.82 True fake: scaffold gap size wrong estimation (local) 69222105 69224051 80854 82800 NC_000014.9 velvet.59334 99.9 True fake: scaffold gap size wrong estimation (local) 69231044 69233452 82811 85268 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 69234068 69238615 86673 91220 NC_000014.9 velvet.59334 99.87 True fake: scaffold gap size wrong estimation (local) 69238836 69239756 91916 92836 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 69239903 69245707 93517 99380 NC_000014.9 velvet.59334 99.91 True fake: scaffold gap size wrong estimation (local) 69246008 69246911 100300 101203 NC_000014.9 velvet.59334 99.89 True fake: scaffold gap size wrong estimation (local) 69247040 69262895 101583 119363 NC_000014.9 velvet.59334 99.73 True fake: scaffold gap size wrong estimation (local) 69263132 69264830 120191 121889 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 69264931 69272110 122544 130579 NC_000014.9 velvet.59334 99.87 True fake: scaffold gap size wrong estimation (local) 69272396 69275765 131586 134955 NC_000014.9 velvet.59334 99.91 True fake: scaffold gap size wrong estimation (local) 69279280 69282677 141215 144610 NC_000014.9 velvet.59334 99.79 True fake: scaffold gap size wrong estimation (local) 69282969 69284945 145720 147735 NC_000014.9 velvet.59334 97.77 True fake: scaffold gap size wrong estimation (extensive) 69295729 69296362 149893 150526 NC_000014.9 velvet.59334 99.84 True fake: scaffold gap size wrong estimation (local) 69296669 69301440 151615 156460 NC_000014.9 velvet.59334 98.09 True fake: scaffold gap size wrong estimation (local) 69301927 69302441 157758 158272 NC_000014.9 velvet.59334 97.86 True indel: indel (<= 5bp) 69302444 69305130 158273 160959 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 69305534 69310791 161722 168172 NC_000014.9 velvet.59334 99.82 True fake: scaffold gap size wrong estimation (local) 69310900 69311959 168423 169482 NC_000014.9 velvet.59334 99.91 True fake: scaffold gap size wrong estimation (local) 69312244 69316796 170435 174987 NC_000014.9 velvet.59334 99.71 True fake: scaffold gap size wrong estimation (local) 69316797 69320247 177190 180640 NC_000014.9 velvet.59334 99.59 True relocation, scaffold gap is present, inconsistency = 148429 69471233 69472829 184792 183197 NC_000014.9 velvet.59334 99.94 True fake: scaffold gap size wrong estimation (local) 69467723 69468542 189293 188474 NC_000014.9 velvet.59334 97.56 True local misassembly 69466972 69467493 189815 189294 NC_000014.9 velvet.59334 100.0 True relocation, scaffold gap is present, inconsistency = -20265495 89731381 89731922 190901 190360 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 89730029 89731016 192228 191253 NC_000014.9 velvet.59334 98.77 True fake: scaffold gap size wrong estimation (local) 89726580 89729912 196628 193294 NC_000014.9 velvet.59334 99.76 True relocation, scaffold gap is present, inconsistency = 20263263 69457473 69462939 202777 197006 NC_000014.9 velvet.59334 100.0 True relocation, scaffold gap is present, inconsistency = 12339673 57110912 57111487 209090 209665 NC_000014.9 velvet.59334 99.83 True relocation, scaffold gap is present, inconsistency = -22607 57088891 57089451 209676 210236 NC_000014.9 velvet.59334 99.47 True indel: indel (<= 5bp) 57089453 57090942 210237 211726 NC_000014.9 velvet.59334 99.93 True local misassembly 57094861 57095446 211727 212312 NC_000014.9 velvet.59334 98.29 True fake: scaffold gap size wrong estimation (local) 57096129 57098420 212963 215254 NC_000014.9 velvet.59334 99.96 True fake: scaffold gap size wrong estimation (local) 57118213 57118959 230457 231203 NC_000014.9 velvet.59334 99.6 True fake: scaffold gap size wrong estimation (local) 57119221 57124990 232203 237967 NC_000014.9 velvet.59334 99.83 True fake: scaffold gap size wrong estimation (local) 57125219 57126642 238946 240410 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 57126839 57127840 240854 241855 NC_000014.9 velvet.59334 100.0 True relocation, scaffold gap is present, inconsistency = 32573868 89701719 89703985 244536 241866 NC_000014.9 velvet.59334 98.26 True fake: scaffold gap size wrong estimation (local) 89699942 89701595 246645 244994 NC_000014.9 velvet.59334 99.64 True fake: not a misassembly (possible transposable element) 57130597 57132184 246656 248294 NC_000014.9 velvet.59334 99.31 True fake: not a misassembly (possible transposable element) 89696662 89697691 251008 249979 NC_000014.9 velvet.59334 98.93 True fake: scaffold gap size wrong estimation (local) 89695486 89696299 252029 251216 NC_000014.9 velvet.59334 99.75 True relocation, scaffold gap is present, inconsistency = 38890585 50804193 50804762 252168 252737 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 50804918 50808966 253824 257892 NC_000014.9 velvet.59334 99.46 True relocation, scaffold gap is present, inconsistency = 38872021 89680998 89682080 257903 258985 NC_000014.9 velvet.59334 99.82 True fake: scaffold gap size wrong estimation (local) 89682329 89683782 259764 261217 NC_000014.9 velvet.59334 99.86 True fake: scaffold gap size wrong estimation (local) 89685668 89686299 263008 263639 NC_000014.9 velvet.59334 98.58 True fake: scaffold gap size wrong estimation (local) 89687453 89688208 265103 265858 NC_000014.9 velvet.59334 100.0 True relocation, scaffold gap is present, inconsistency = -190396 89502123 89505277 270169 273323 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 89511321 89512885 274202 275762 NC_000014.9 velvet.59334 99.55 True fake: scaffold gap size wrong estimation (local) 89513942 89514936 277415 278409 NC_000014.9 velvet.59334 99.9 True fake: scaffold gap size wrong estimation (local) 89544373 89546346 303555 305528 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 89547522 89548863 307530 308871 NC_000014.9 velvet.59334 99.25 True fake: scaffold gap size wrong estimation (local) 89549136 89552604 309971 313439 NC_000014.9 velvet.59334 99.97 True fake: scaffold gap size wrong estimation (local) 89552797 89554061 314280 315833 NC_000014.9 velvet.59334 99.84 True relocation, scaffold gap is present, inconsistency = 110360 89670076 89670582 321994 321488 NC_000014.9 velvet.59334 98.03 True local misassembly 89669129 89669882 322748 321995 NC_000014.9 velvet.59334 100.0 True relocation, scaffold gap is present, inconsistency = -7526 89674803 89676110 324600 323293 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 89667869 89668786 325900 324983 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 89664513 89665752 329790 328551 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 89661022 89663810 334083 331327 NC_000014.9 velvet.59334 97.17 True fake: not a misassembly (possible transposable element) 43851548 43856718 346752 352738 NC_000014.9 velvet.59334 99.96 True fake: not a misassembly (possible transposable element) 89638896 89639941 354179 353134 NC_000014.9 velvet.59334 99.9 True fake: scaffold gap size wrong estimation (local) 89635593 89638443 357495 354643 NC_000014.9 velvet.59334 99.89 True fake: scaffold gap size wrong estimation (local) 89634777 89635396 359014 358395 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 89632979 89634499 360944 359441 NC_000014.9 velvet.59334 98.74 True fake: scaffold gap size wrong estimation (local) 89630105 89632596 364566 362190 NC_000014.9 velvet.59334 95.09 True fake: scaffold gap size wrong estimation (local) 89626868 89629969 368684 365585 NC_000014.9 velvet.59334 99.84 True fake: scaffold gap size wrong estimation (local) 89621376 89623517 370876 368695 NC_000014.9 velvet.59334 99.95 True relocation, scaffold gap is present, inconsistency = 49932 89570283 89571255 371065 372037 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 89571542 89573854 372951 375263 NC_000014.9 velvet.59334 99.91 True fake: scaffold gap size wrong estimation (local) 89573987 89579094 375660 381063 NC_000014.9 velvet.59334 99.9 True fake: scaffold gap size wrong estimation (local) 89608435 89611549 408891 412605 NC_000014.9 velvet.59334 99.87 True fake: scaffold gap size wrong estimation (local) 89611856 89612779 413201 414638 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 89613147 89615138 415027 417018 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 89615139 89618796 417085 420742 NC_000014.9 velvet.59334 99.51 True fake: scaffold gap size wrong estimation (local) 89619123 89621389 424091 426357 NC_000014.9 velvet.59334 99.56 True relocation, scaffold gap is present, inconsistency = 11728 89604198 89606567 429554 427185 NC_000014.9 velvet.59334 99.2 True fake: scaffold gap size wrong estimation (local) 89602767 89604197 431134 429704 NC_000014.9 velvet.59334 99.86 True fake: scaffold gap size wrong estimation (local) 89596408 89602118 438477 432552 NC_000014.9 velvet.59334 99.95 True fake: scaffold gap size wrong estimation (local) 89595309 89596152 440109 439266 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 89593462 89595032 442398 440748 NC_000014.9 velvet.59334 95.07 True fake: scaffold gap size wrong estimation (local) 89587868 89593360 448641 442585 NC_000014.9 velvet.59334 98.84 True fake: scaffold gap size wrong estimation (local) 89584987 89587583 452308 449700 NC_000014.9 velvet.59334 99.96 True fake: scaffold gap size wrong estimation (local) 89581418 89583672 456615 454464 NC_000014.9 velvet.59334 95.28 True fake: scaffold gap size wrong estimation (local) 89579421 89580901 459430 457951 NC_000014.9 velvet.59334 99.8 True relocation, scaffold gap is present, inconsistency = 59091 89640003 89640755 459441 460193 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 89640989 89643189 460977 463177 NC_000014.9 velvet.59334 99.91 True fake: scaffold gap size wrong estimation (local) 89651829 89652874 470228 471273 NC_000014.9 velvet.59334 99.81 True relocation, scaffold gap is present, inconsistency = 80796 89569215 89569986 473091 472320 NC_000014.9 velvet.59334 99.74 True fake: scaffold gap size wrong estimation (local) 89567996 89568919 474454 473531 NC_000014.9 velvet.59334 99.68 True fake: scaffold gap size wrong estimation (local) 89565095 89567471 477580 475208 NC_000014.9 velvet.59334 99.71 True fake: scaffold gap size wrong estimation (local) 89564127 89564818 479253 478562 NC_000014.9 velvet.59334 99.86 True fake: scaffold gap size wrong estimation (local) 89562525 89563903 481015 479637 NC_000014.9 velvet.59334 99.85 True relocation, scaffold gap is present, inconsistency = 38715642 50844844 50846871 483053 481027 NC_000014.9 velvet.59334 99.95 True fake: scaffold gap size wrong estimation (local) 50842989 50844703 485767 484053 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 50837359 50841655 492134 487788 NC_000014.9 velvet.59334 99.81 True fake: scaffold gap size wrong estimation (local) 50836103 50836948 494039 493194 NC_000014.9 velvet.59334 99.53 True fake: scaffold gap size wrong estimation (local) 50834854 50835913 495401 494342 NC_000014.9 velvet.59334 99.91 True fake: scaffold gap size wrong estimation (local) 50833948 50834768 496377 495557 NC_000014.9 velvet.59334 99.88 True fake: scaffold gap size wrong estimation (local) 50827769 50833653 503352 497424 NC_000014.9 velvet.59334 99.93 True relocation, scaffold gap is present, inconsistency = 15487128 35338673 35340524 505320 503469 NC_000014.9 velvet.59334 99.57 True fake: scaffold gap size wrong estimation (extensive) 35327166 35328658 509368 507876 NC_000014.9 velvet.59334 99.93 True fake: scaffold gap size wrong estimation (local) 35325928 35326789 511315 510454 NC_000014.9 velvet.59334 100.0 True relocation, scaffold gap is present, inconsistency = 54343495 89670883 89671493 511914 512524 NC_000014.9 velvet.59334 99.84 True local misassembly 89666822 89667806 513425 514409 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 89672518 89674586 514420 516482 NC_000014.9 velvet.59334 99.61 True relocation, scaffold gap is present, inconsistency = 128414 89541438 89544093 519150 516493 NC_000014.9 velvet.59334 99.62 True fake: scaffold gap size wrong estimation (local) 89540726 89541301 520824 520249 NC_000014.9 velvet.59334 99.83 True fake: scaffold gap size wrong estimation (local) 89539102 89540451 522291 520942 NC_000014.9 velvet.59334 99.93 True fake: scaffold gap size wrong estimation (local) 89536785 89538552 525468 523717 NC_000014.9 velvet.59334 98.98 True relocation, scaffold gap is present, inconsistency = 138559 89677122 89677629 525479 525986 NC_000014.9 velvet.59334 99.8 True fake: scaffold gap size wrong estimation (local) 89678367 89679319 526664 527616 NC_000014.9 velvet.59334 99.69 True fake: scaffold gap size wrong estimation (local) 89679718 89680979 528456 529967 NC_000014.9 velvet.59334 99.92 True relocation, scaffold gap is present, inconsistency = 38876040 50801362 50803072 532283 530573 NC_000014.9 velvet.59334 99.82 True fake: scaffold gap size wrong estimation (local) 50800022 50800768 534350 533604 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 50799019 50799709 535280 534590 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 50795956 50798780 539095 536271 NC_000014.9 velvet.59334 99.89 True fake: scaffold gap size wrong estimation (extensive) 50765194 50765715 561404 560883 NC_000014.9 velvet.59334 100.0 True relocation, scaffold gap is present, inconsistency = -14298 50778225 50779481 562644 561415 NC_000014.9 velvet.59334 97.83 True relocation, scaffold gap is present, inconsistency = -38872708 89646567 89650922 567887 562655 NC_000014.9 velvet.59334 99.72 True fake: scaffold gap size wrong estimation (local) 89645566 89646284 569266 568548 NC_000014.9 velvet.59334 100.0 True fake: scaffold gap size wrong estimation (local) 89643446 89645270 571578 569754 NC_000014.9 velvet.59334 99.78 True relocation, scaffold gap is present, inconsistency = 38865213 50771916 50778222 577895 571589 NC_000014.9 velvet.59334 99.94 True fake: scaffold gap size wrong estimation (local) 50770036 50771665 580434 578805 NC_000014.9 velvet.59334 99.94 True relocation, inconsistency = -27121129 77889252 77891164 582349 580435 NC_000014.9 velvet.59334 99.9 True local misassembly 77891135 77892622 583847 582360 NC_000014.9 velvet.59334 99.87 True relocation, scaffold gap is present, inconsistency = 27123596 50766026 50767528 585360 583858 NC_000014.9 velvet.59334 99.93 True fake: scaffold gap size wrong estimation (local) 50763717 50764991 588592 587318 NC_000014.9 velvet.59334 100.0 True local misassembly 50768074 50769519 590048 588603 NC_000014.9 velvet.59334 99.93 True relocation, scaffold gap is present, inconsistency = -27121045 77886951 77889074 592215 590093 NC_000014.9 velvet.59334 99.81 True relocation, scaffold gap is present, inconsistency = 6623651 71262148 71263289 592226 593367 NC_000014.9 velvet.59334 99.82 True CONTIG velvet.59334 593442 misassembled 67622108 67623558 347 1797 NC_000014.9 velvet.59377 99.79 True fake: scaffold gap size wrong estimation (local) 67626760 67629083 5970 8465 NC_000014.9 velvet.59377 98.6 True fake: scaffold gap size wrong estimation (local) 67631548 67632831 11327 12607 NC_000014.9 velvet.59377 99.69 True fake: scaffold gap size wrong estimation (local) 67633123 67634349 13372 14598 NC_000014.9 velvet.59377 99.92 True relocation, scaffold gap is present, inconsistency = 32971581 34625711 34626370 50429 49770 NC_000014.9 velvet.59377 100.0 True fake: scaffold gap size wrong estimation (local) 34622542 34624089 54568 53021 NC_000014.9 velvet.59377 99.87 True fake: scaffold gap size wrong estimation (local) 34620818 34621944 57312 56090 NC_000014.9 velvet.59377 96.39 True relocation, scaffold gap is present, inconsistency = -29248 34648829 34649794 58549 57584 NC_000014.9 velvet.59377 98.96 True fake: scaffold gap size wrong estimation (local) 34646681 34647291 61693 61083 NC_000014.9 velvet.59377 98.2 True local misassembly 34645918 34646436 62212 61694 NC_000014.9 velvet.59377 100.0 True fake: scaffold gap size wrong estimation (local) 34643535 34644101 65557 64991 NC_000014.9 velvet.59377 100.0 True fake: scaffold gap size wrong estimation (extensive) 34618612 34619141 82767 82238 NC_000014.9 velvet.59377 98.11 True fake: scaffold gap size wrong estimation (local) 34610383 34610962 93503 92924 NC_000014.9 velvet.59377 100.0 True fake: scaffold gap size wrong estimation (local) 34603211 34605890 102839 100111 NC_000014.9 velvet.59377 99.66 True relocation, scaffold gap is present, inconsistency = -52526 34650601 34651543 107975 107033 NC_000014.9 velvet.59377 100.0 True fake: scaffold gap size wrong estimation (local) 34640733 34641488 113495 112740 NC_000014.9 velvet.59377 99.87 True fake: scaffold gap size wrong estimation (local) 34638580 34639259 116776 116097 NC_000014.9 velvet.59377 99.71 True fake: scaffold gap size wrong estimation (local) 34632144 34634303 125255 122694 NC_000014.9 velvet.59377 99.39 True fake: scaffold gap size wrong estimation (local) 34628585 34630921 129463 127127 NC_000014.9 velvet.59377 99.74 True fake: scaffold gap size wrong estimation (local) 34583281 34583834 174711 174110 NC_000014.9 velvet.59377 100.0 True relocation, scaffold gap is present, inconsistency = -11544 34577346 34577919 192190 191617 NC_000014.9 velvet.59377 100.0 True relocation, scaffold gap is present, inconsistency = -14112 34578942 34579714 204706 203934 NC_000014.9 velvet.59377 99.74 True CONTIG velvet.59377 236294 misassembled 57519172 57520003 2808 3639 NC_000014.9 velvet.59386 99.04 True fake: scaffold gap size wrong estimation (local) 57524603 57525221 10144 10762 NC_000014.9 velvet.59386 98.55 True relocation, inconsistency = -4210894 53314330 53318072 10765 14507 NC_000014.9 velvet.59386 99.81 True fake: scaffold gap size wrong estimation (local) 53324511 53339165 17600 33147 NC_000014.9 velvet.59386 99.24 True fake: scaffold gap size wrong estimation (local) 53339450 53343195 34185 38108 NC_000014.9 velvet.59386 99.87 True fake: scaffold gap size wrong estimation (local) 53343677 53345599 39424 41290 NC_000014.9 velvet.59386 96.5 True fake: scaffold gap size wrong estimation (local) 53345886 53347658 42164 43936 NC_000014.9 velvet.59386 99.72 True fake: scaffold gap size wrong estimation (local) 53348003 53349937 44826 46760 NC_000014.9 velvet.59386 99.53 True fake: scaffold gap size wrong estimation (local) 53350986 53353312 47608 49935 NC_000014.9 velvet.59386 99.7 True local misassembly 53350222 53350968 50605 51352 NC_000014.9 velvet.59386 99.33 True fake: scaffold gap size wrong estimation (local) 53353871 53359681 51363 57931 NC_000014.9 velvet.59386 99.67 True fake: scaffold gap size wrong estimation (local) 53360039 53360559 58395 58913 NC_000014.9 velvet.59386 98.63 True fake: scaffold gap size wrong estimation (local) 53360837 53362186 59058 60407 NC_000014.9 velvet.59386 99.56 True fake: scaffold gap size wrong estimation (local) 53367568 53372729 66762 71923 NC_000014.9 velvet.59386 99.88 True fake: scaffold gap size wrong estimation (local) 53372894 53379540 72864 80388 NC_000014.9 velvet.59386 99.98 True fake: scaffold gap size wrong estimation (local) 53380105 53383299 82153 85347 NC_000014.9 velvet.59386 99.78 True fake: scaffold gap size wrong estimation (local) 53383764 53389621 89887 95744 NC_000014.9 velvet.59386 99.74 True fake: scaffold gap size wrong estimation (local) 53396093 53397438 98974 100319 NC_000014.9 velvet.59386 99.11 True fake: scaffold gap size wrong estimation (local) 53398005 53402212 102561 106768 NC_000014.9 velvet.59386 100.0 True fake: scaffold gap size wrong estimation (local) 53402538 53407464 107871 112792 NC_000014.9 velvet.59386 99.67 True fake: scaffold gap size wrong estimation (local) 53407746 53417487 113967 123789 NC_000014.9 velvet.59386 99.32 True fake: scaffold gap size wrong estimation (local) 53419654 53422569 127486 130401 NC_000014.9 velvet.59386 99.93 True fake: scaffold gap size wrong estimation (local) 53422594 53424023 131349 132778 NC_000014.9 velvet.59386 100.0 True relocation, scaffold gap is present, inconsistency = 17792382 35617639 35619353 145351 143637 NC_000014.9 velvet.59386 100.0 True fake: scaffold gap size wrong estimation (local) 35613343 35617207 150514 146650 NC_000014.9 velvet.59386 99.97 True relocation, scaffold gap is present, inconsistency = 17810584 53430445 53434631 153168 157368 NC_000014.9 velvet.59386 99.98 True fake: scaffold gap size wrong estimation (local) 53434771 53437237 158270 160736 NC_000014.9 velvet.59386 100.0 True relocation, scaffold gap is present, inconsistency = 17831944 35588194 35590626 175382 172937 NC_000014.9 velvet.59386 99.92 True fake: scaffold gap size wrong estimation (local) 35584531 35585620 179650 178560 NC_000014.9 velvet.59386 99.91 True fake: scaffold gap size wrong estimation (local) 35579599 35584449 185355 180505 NC_000014.9 velvet.59386 99.98 True fake: scaffold gap size wrong estimation (local) 35575868 35579352 189857 186373 NC_000014.9 velvet.59386 100.0 True fake: scaffold gap size wrong estimation (local) 35571635 35574759 195087 191963 NC_000014.9 velvet.59386 100.0 True fake: scaffold gap size wrong estimation (local) 35570272 35571390 196898 195780 NC_000014.9 velvet.59386 100.0 True fake: scaffold gap size wrong estimation (local) 35563024 35569998 205574 197783 NC_000014.9 velvet.59386 99.7 True fake: scaffold gap size wrong estimation (local) 35561753 35562737 206836 205852 NC_000014.9 velvet.59386 98.88 True fake: scaffold gap size wrong estimation (local) 35557302 35560948 212104 208458 NC_000014.9 velvet.59386 99.97 True CONTIG velvet.59386 212169 misassembled 91735325 91736225 1 902 NC_000014.9 velvet.59412 99.67 True CONTIG velvet.59412 902 correct 49177585 49178228 1 644 NC_000014.9 velvet.59439 99.84 True fake: scaffold gap size wrong estimation (local) 49178596 49179430 4184 5017 NC_000014.9 velvet.59439 99.28 True CONTIG velvet.59439 8016 correct CONTIG velvet.59458 219 unaligned CONTIG velvet.59465 3580 unaligned CONTIG velvet.59500 455 unaligned CONTIG velvet.59548 10715 unaligned 57500447 57513548 1 13285 NC_000014.9 velvet.59567 99.75 True relocation, scaffold gap is present, inconsistency = 92257 57404898 57406900 16573 14575 NC_000014.9 velvet.59567 99.8 True relocation, scaffold gap is present, inconsistency = -32290871 89692132 89693393 20210 18949 NC_000014.9 velvet.59567 99.84 True fake: scaffold gap size wrong estimation (local) 89689936 89691412 23353 21877 NC_000014.9 velvet.59567 99.86 True fake: scaffold gap size wrong estimation (local) 89688455 89689321 25583 24717 NC_000014.9 velvet.59567 100.0 True relocation, scaffold gap is present, inconsistency = -19868 89706371 89708301 27535 25605 NC_000014.9 velvet.59567 99.95 True inversion, scaffold gap is present 89708739 89709778 28623 29662 NC_000014.9 velvet.59567 100.0 True fake: scaffold gap size wrong estimation (local) 89716432 89717102 29926 30596 NC_000014.9 velvet.59567 100.0 True fake: scaffold gap size wrong estimation (local) 89717346 89719190 31007 32843 NC_000014.9 velvet.59567 99.51 True fake: scaffold gap size wrong estimation (local) 89719466 89722456 33807 36829 NC_000014.9 velvet.59567 97.86 True fake: scaffold gap size wrong estimation (local) 89722729 89723591 37798 38660 NC_000014.9 velvet.59567 100.0 True relocation, scaffold gap is present, inconsistency = -45909246 43814356 43823334 38671 48679 NC_000014.9 velvet.59567 99.88 True relocation, scaffold gap is present, inconsistency = 45828456 89658242 89660791 57677 55131 NC_000014.9 velvet.59567 99.61 True fake: scaffold gap size wrong estimation (local) 89653124 89654431 63916 62609 NC_000014.9 velvet.59567 99.85 True relocation, scaffold gap is present, inconsistency = 45823535 43828781 43829578 63927 64724 NC_000014.9 velvet.59567 100.0 True relocation, scaffold gap is present, inconsistency = -16795091 27034969 27038751 65206 68984 NC_000014.9 velvet.59567 99.89 True fake: scaffold gap size wrong estimation (local) 27038976 27044068 69998 75178 NC_000014.9 velvet.59567 99.98 True relocation, scaffold gap is present, inconsistency = 16787488 43831567 43833345 75189 76967 NC_000014.9 velvet.59567 99.89 True fake: scaffold gap size wrong estimation (local) 43833605 43845151 78132 91092 NC_000014.9 velvet.59567 99.74 True fake: scaffold gap size wrong estimation (local) 43845411 43847966 92116 94671 NC_000014.9 velvet.59567 99.96 True fake: scaffold gap size wrong estimation (local) 43848564 43849260 96029 96725 NC_000014.9 velvet.59567 100.0 True fake: scaffold gap size wrong estimation (local) 43849450 43851014 96803 98430 NC_000014.9 velvet.59567 99.74 True fake: scaffold gap size wrong estimation (local) 43863820 43865545 108001 109752 NC_000014.9 velvet.59567 98.4 True fake: scaffold gap size wrong estimation (local) 43865818 43866635 110159 110976 NC_000014.9 velvet.59567 99.88 True fake: scaffold gap size wrong estimation (local) 43866762 43880952 111805 126002 NC_000014.9 velvet.59567 99.97 True fake: scaffold gap size wrong estimation (local) 43881230 43904819 127010 153130 NC_000014.9 velvet.59567 99.91 True fake: scaffold gap size wrong estimation (local) 43906457 43909075 155983 158819 NC_000014.9 velvet.59567 97.45 True fake: scaffold gap size wrong estimation (local) 43909670 43913253 160082 163607 NC_000014.9 velvet.59567 98.16 True fake: scaffold gap size wrong estimation (local) 43913416 43919540 164585 170748 NC_000014.9 velvet.59567 99.24 True fake: scaffold gap size wrong estimation (local) 43919961 43920665 171948 172651 NC_000014.9 velvet.59567 99.71 True fake: scaffold gap size wrong estimation (local) 43920947 43936028 172741 189482 NC_000014.9 velvet.59567 99.63 True fake: scaffold gap size wrong estimation (local) 43936736 43941124 189973 195539 NC_000014.9 velvet.59567 97.94 True fake: scaffold gap size wrong estimation (local) 43941762 43942984 196849 198064 NC_000014.9 velvet.59567 99.42 True fake: scaffold gap size wrong estimation (local) 43943082 43944501 198225 200517 NC_000014.9 velvet.59567 99.86 True fake: scaffold gap size wrong estimation (local) 43944779 43946057 200767 202045 NC_000014.9 velvet.59567 100.0 True relocation, scaffold gap is present, inconsistency = 20853 43970959 43973566 208701 206094 NC_000014.9 velvet.59567 99.92 True fake: scaffold gap size wrong estimation (local) 43968645 43970659 211886 209829 NC_000014.9 velvet.59567 100.0 True fake: not a misassembly (possible transposable element) 43967141 43968043 213481 214383 NC_000014.9 velvet.59567 99.89 True fake: not a misassembly (possible transposable element) 43963608 43965915 218211 215900 NC_000014.9 velvet.59567 99.61 True CONTIG velvet.59567 219882 misassembled 90220759 90221320 471 1032 NC_000014.9 velvet.59608 99.82 True fake: scaffold gap size wrong estimation (local) 90224468 90225062 7839 8475 NC_000014.9 velvet.59608 100.0 True fake: scaffold gap size wrong estimation (local) 90225364 90226035 8574 9245 NC_000014.9 velvet.59608 99.7 True relocation, scaffold gap is present, inconsistency = -68949818 21308681 21309463 41709 42489 NC_000014.9 velvet.59608 99.36 True fake: scaffold gap size wrong estimation (local) 21310592 21311297 44246 44951 NC_000014.9 velvet.59608 100.0 True fake: scaffold gap size wrong estimation (local) 21311580 21312705 45062 46187 NC_000014.9 velvet.59608 100.0 True CONTIG velvet.59608 52215 misassembled 58656117 58658265 2200 1 NC_000014.9 velvet.59624 99.81 True fake: scaffold gap size wrong estimation (local) 58653201 58654693 5843 4351 NC_000014.9 velvet.59624 100.0 True fake: scaffold gap size wrong estimation (local) 58650342 58652076 9495 7761 NC_000014.9 velvet.59624 99.94 True relocation, scaffold gap is present, inconsistency = 33166 58606564 58610626 16045 20107 NC_000014.9 velvet.59624 99.9 True relocation, scaffold gap is present, inconsistency = -23577426 35036534 35037157 23441 24088 NC_000014.9 velvet.59624 96.14 True relocation, scaffold gap is present, inconsistency = 23572712 58613785 58614440 28659 28004 NC_000014.9 velvet.59624 99.7 True fake: scaffold gap size wrong estimation (local) 58612539 58613583 30449 29405 NC_000014.9 velvet.59624 98.95 True local misassembly 58611710 58612334 31074 30450 NC_000014.9 velvet.59624 99.68 True relocation, scaffold gap is present, inconsistency = -22051 58631227 58633168 33608 31667 NC_000014.9 velvet.59624 99.9 True fake: not a misassembly (possible transposable element) 58627833 58629679 34816 36662 NC_000014.9 velvet.59624 99.84 True fake: not a misassembly (possible transposable element) 58624711 58626815 39882 37778 NC_000014.9 velvet.59624 99.86 True fake: scaffold gap size wrong estimation (local) 58623646 58624455 41430 40621 NC_000014.9 velvet.59624 99.88 True inversion, scaffold gap is present 58630343 58631240 41613 42510 NC_000014.9 velvet.59624 99.89 True fake: scaffold gap size wrong estimation (local) 58633832 58642136 45590 53996 NC_000014.9 velvet.59624 99.96 True fake: scaffold gap size wrong estimation (local) 58642696 58644463 55243 57010 NC_000014.9 velvet.59624 100.0 True relocation, scaffold gap is present, inconsistency = 37692 58595040 58597012 66974 65002 NC_000014.9 velvet.59624 99.65 True fake: scaffold gap size wrong estimation (local) 58593599 58594317 69339 68621 NC_000014.9 velvet.59624 100.0 True relocation, scaffold gap is present, inconsistency = 67322 58661650 58672464 69350 80357 NC_000014.9 velvet.59624 99.94 True fake: scaffold gap size wrong estimation (local) 58672583 58674746 80768 82931 NC_000014.9 velvet.59624 100.0 True fake: scaffold gap size wrong estimation (local) 58675037 58681519 84013 90494 NC_000014.9 velvet.59624 99.95 True fake: scaffold gap size wrong estimation (local) 58681686 58682804 91495 92613 NC_000014.9 velvet.59624 99.91 True fake: scaffold gap size wrong estimation (local) 58683080 58684043 92776 93739 NC_000014.9 velvet.59624 100.0 True fake: scaffold gap size wrong estimation (local) 58684573 58686635 95098 97160 NC_000014.9 velvet.59624 99.61 True fake: scaffold gap size wrong estimation (local) 58700423 58706298 105720 111595 NC_000014.9 velvet.59624 99.93 True fake: scaffold gap size wrong estimation (local) 58726579 58727888 138219 139528 NC_000014.9 velvet.59624 100.0 True relocation, scaffold gap is present, inconsistency = -42957 58687526 58689132 142123 143729 NC_000014.9 velvet.59624 99.69 True fake: scaffold gap size wrong estimation (local) 58689767 58690919 145445 146597 NC_000014.9 velvet.59624 99.74 True fake: scaffold gap size wrong estimation (local) 58694579 58695952 146608 147981 NC_000014.9 velvet.59624 99.64 True fake: scaffold gap size wrong estimation (local) 58696077 58700387 148977 153285 NC_000014.9 velvet.59624 99.84 True fake: scaffold gap size wrong estimation (local) 58706320 58707368 153296 154343 NC_000014.9 velvet.59624 99.81 True fake: scaffold gap size wrong estimation (local) 58707610 58711059 155373 158832 NC_000014.9 velvet.59624 99.6 True fake: scaffold gap size wrong estimation (local) 58711703 58714392 160302 162991 NC_000014.9 velvet.59624 99.93 True fake: scaffold gap size wrong estimation (local) 58714686 58716044 163920 165278 NC_000014.9 velvet.59624 100.0 True fake: scaffold gap size wrong estimation (local) 58716259 58719406 165847 169582 NC_000014.9 velvet.59624 99.87 True fake: scaffold gap size wrong estimation (local) 58720438 58723386 171228 174176 NC_000014.9 velvet.59624 99.93 True fake: scaffold gap size wrong estimation (local) 58723638 58726502 175239 178056 NC_000014.9 velvet.59624 98.21 True fake: scaffold gap size wrong estimation (local) 58730057 58734551 178067 182560 NC_000014.9 velvet.59624 99.89 True relocation, scaffold gap is present, inconsistency = 29952068 88686694 88692092 188033 182635 NC_000014.9 velvet.59624 100.0 True relocation, scaffold gap is present, inconsistency = 9711022 98403125 98407924 188044 193577 NC_000014.9 velvet.59624 99.03 True relocation, scaffold gap is present, inconsistency = 39666142 58734544 58736972 196369 193588 NC_000014.9 velvet.59624 99.92 True relocation, scaffold gap is present, inconsistency = -39670996 98399304 98400986 202605 200923 NC_000014.9 velvet.59624 100.0 True relocation, scaffold gap is present, inconsistency = 39669811 58728535 58729482 202616 203563 NC_000014.9 velvet.59624 99.89 True fake: scaffold gap size wrong estimation (extensive) 58737309 58737920 203574 204185 NC_000014.9 velvet.59624 100.0 True fake: scaffold gap size wrong estimation (local) 58738346 58743123 205214 209990 NC_000014.9 velvet.59624 99.94 True relocation, scaffold gap is present, inconsistency = 39646708 98390458 98391539 210617 211698 NC_000014.9 velvet.59624 99.91 True inversion, scaffold gap is present 98379461 98383663 221427 217150 NC_000014.9 velvet.59624 99.83 True relocation, scaffold gap is present, inconsistency = 76133466 22244946 22245922 221500 222476 NC_000014.9 velvet.59624 100.0 True local misassembly 22242461 22243242 222487 223268 NC_000014.9 velvet.59624 99.49 True relocation, scaffold gap is present, inconsistency = 76134997 98378364 98379285 224314 223393 NC_000014.9 velvet.59624 100.0 True fake: scaffold gap size wrong estimation (local) 98374220 98378134 229055 225140 NC_000014.9 velvet.59624 99.8 True fake: scaffold gap size wrong estimation (local) 98358461 98359316 243495 242640 NC_000014.9 velvet.59624 98.01 True fake: scaffold gap size wrong estimation (local) 98355579 98358460 246437 243556 NC_000014.9 velvet.59624 99.9 True indel: indel (> 5bp) 98351625 98355558 250371 246438 NC_000014.9 velvet.59624 99.64 True local misassembly 98346363 98348433 252442 250372 NC_000014.9 velvet.59624 99.95 True fake: scaffold gap size wrong estimation (local) 98338412 98339957 253970 252453 NC_000014.9 velvet.59624 97.99 True relocation, scaffold gap is present, inconsistency = 45312227 53024985 53026174 253981 255170 NC_000014.9 velvet.59624 100.0 True fake: scaffold gap size wrong estimation (extensive) 53038213 53043402 259463 264652 NC_000014.9 velvet.59624 99.98 True fake: scaffold gap size wrong estimation (local) 53043507 53048354 265094 270885 NC_000014.9 velvet.59624 99.87 True fake: scaffold gap size wrong estimation (local) 53048622 53057897 271892 281649 NC_000014.9 velvet.59624 99.92 True fake: scaffold gap size wrong estimation (local) 53058414 53059260 282471 283317 NC_000014.9 velvet.59624 99.88 True fake: scaffold gap size wrong estimation (local) 53059896 53061807 284697 286608 NC_000014.9 velvet.59624 99.9 True fake: scaffold gap size wrong estimation (local) 53061905 53066220 286619 291887 NC_000014.9 velvet.59624 99.76 True fake: scaffold gap size wrong estimation (local) 53067747 53068261 294871 295385 NC_000014.9 velvet.59624 100.0 True fake: scaffold gap size wrong estimation (local) 53068348 53075930 295965 304396 NC_000014.9 velvet.59624 99.96 True fake: scaffold gap size wrong estimation (local) 53076061 53080119 305331 309385 NC_000014.9 velvet.59624 99.83 True relocation, scaffold gap is present, inconsistency = 45240490 98322123 98325036 313812 310899 NC_000014.9 velvet.59624 99.9 True relocation, scaffold gap is present, inconsistency = 76073490 22235447 22236629 325816 327040 NC_000014.9 velvet.59624 98.61 True fake: scaffold gap size wrong estimation (local) 22237073 22238084 328014 329025 NC_000014.9 velvet.59624 99.51 True fake: scaffold gap size wrong estimation (local) 22238588 22240210 330332 331954 NC_000014.9 velvet.59624 99.63 True relocation, scaffold gap is present, inconsistency = 30868687 53109364 53110787 332421 333844 NC_000014.9 velvet.59624 99.93 True fake: scaffold gap size wrong estimation (local) 53110938 53112163 334223 335448 NC_000014.9 velvet.59624 99.92 True fake: scaffold gap size wrong estimation (local) 53112447 53112994 336667 337214 NC_000014.9 velvet.59624 100.0 True fake: scaffold gap size wrong estimation (local) 53114084 53114909 337736 338561 NC_000014.9 velvet.59624 98.55 True relocation, scaffold gap is present, inconsistency = -30862074 22269927 22271091 355653 356817 NC_000014.9 velvet.59624 99.74 True fake: scaffold gap size wrong estimation (local) 22271357 22274537 357569 360749 NC_000014.9 velvet.59624 100.0 True fake: not a misassembly (possible transposable element) 98344966 98346291 362167 360842 NC_000014.9 velvet.59624 99.77 True fake: not a misassembly (possible transposable element) 22275133 22282598 362178 370340 NC_000014.9 velvet.59624 99.96 True relocation, scaffold gap is present, inconsistency = 76057380 98339989 98340559 370921 370351 NC_000014.9 velvet.59624 100.0 True relocation, scaffold gap is present, inconsistency = 16063592 82266193 82276386 381123 370932 NC_000014.9 velvet.59624 99.9 True fake: scaffold gap size wrong estimation (local) 82264257 82265913 383714 382058 NC_000014.9 velvet.59624 99.88 True fake: scaffold gap size wrong estimation (local) 82259648 82263982 388933 384599 NC_000014.9 velvet.59624 99.95 True fake: scaffold gap size wrong estimation (local) 82253951 82259507 395418 389857 NC_000014.9 velvet.59624 99.86 True fake: scaffold gap size wrong estimation (local) 82252192 82253676 397842 396358 NC_000014.9 velvet.59624 99.93 True relocation, scaffold gap is present, inconsistency = 59946369 22293034 22295892 407773 410631 NC_000014.9 velvet.59624 99.76 True fake: scaffold gap size wrong estimation (local) 22296176 22302344 411696 417865 NC_000014.9 velvet.59624 99.9 True fake: scaffold gap size wrong estimation (local) 22302571 22303871 418906 420206 NC_000014.9 velvet.59624 99.85 True indel: indel (<= 5bp) 22303877 22305205 420207 421535 NC_000014.9 velvet.59624 99.55 True indel: indel (<= 5bp) 22305206 22306945 421537 423276 NC_000014.9 velvet.59624 99.89 True local misassembly 22306946 22308773 423810 425637 NC_000014.9 velvet.59624 99.95 True fake: scaffold gap size wrong estimation (local) 22309052 22310719 426484 428151 NC_000014.9 velvet.59624 99.88 True fake: scaffold gap size wrong estimation (local) 22311007 22317299 429056 435634 NC_000014.9 velvet.59624 99.95 True fake: scaffold gap size wrong estimation (local) 22327312 22330938 443178 446800 NC_000014.9 velvet.59624 99.64 True fake: scaffold gap size wrong estimation (local) 22331158 22341537 447803 458176 NC_000014.9 velvet.59624 99.83 True fake: scaffold gap size wrong estimation (local) 22341843 22344058 459264 461479 NC_000014.9 velvet.59624 100.0 True fake: scaffold gap size wrong estimation (local) 22368770 22370099 486157 487486 NC_000014.9 velvet.59624 99.92 True fake: scaffold gap size wrong estimation (local) 22370100 22371490 487544 488934 NC_000014.9 velvet.59624 97.84 True local misassembly 22371841 22374335 488935 491429 NC_000014.9 velvet.59624 99.92 True relocation, scaffold gap is present, inconsistency = -32189 22344580 22345766 493863 495049 NC_000014.9 velvet.59624 100.0 True fake: scaffold gap size wrong estimation (local) 22346810 22348810 497298 499298 NC_000014.9 velvet.59624 99.6 True CONTIG velvet.59624 499795 misassembled 36997820 36998717 1 898 NC_000014.9 velvet.59639 100.0 True CONTIG velvet.59639 898 correct 24031669 24032438 1 758 NC_000014.9 velvet.59640 98.05 True fake: scaffold gap size wrong estimation (local) 24034103 24034710 3422 4029 NC_000014.9 velvet.59640 99.84 True CONTIG velvet.59640 7053 correct 29366463 29369455 995 3997 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 29369741 29399497 4738 36989 NC_000014.9 velvet.59679 99.88 True fake: scaffold gap size wrong estimation (local) 29400041 29403995 37921 41872 NC_000014.9 velvet.59679 99.82 True fake: scaffold gap size wrong estimation (local) 29406770 29407640 45704 46574 NC_000014.9 velvet.59679 99.43 True indel: indel (> 5bp) 29407725 29408306 46575 47156 NC_000014.9 velvet.59679 98.28 True fake: scaffold gap size wrong estimation (local) 29408565 29411904 48373 51677 NC_000014.9 velvet.59679 98.92 True fake: scaffold gap size wrong estimation (local) 29415073 29422903 56306 64387 NC_000014.9 velvet.59679 99.99 True fake: scaffold gap size wrong estimation (local) 29423106 29429115 65360 71611 NC_000014.9 velvet.59679 99.9 True fake: scaffold gap size wrong estimation (local) 29429400 29431083 72537 74220 NC_000014.9 velvet.59679 99.82 True fake: scaffold gap size wrong estimation (local) 29431373 29433063 74962 76652 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 29434957 29437108 79136 81266 NC_000014.9 velvet.59679 98.97 True fake: scaffold gap size wrong estimation (local) 29438082 29439257 83377 84552 NC_000014.9 velvet.59679 99.15 True local misassembly 29433344 29434818 84554 86020 NC_000014.9 velvet.59679 99.32 True local misassembly 29439258 29440377 86021 87140 NC_000014.9 velvet.59679 99.11 True fake: scaffold gap size wrong estimation (local) 29440639 29450636 88266 98432 NC_000014.9 velvet.59679 99.96 True fake: scaffold gap size wrong estimation (local) 29450950 29457871 99551 106472 NC_000014.9 velvet.59679 99.9 True fake: scaffold gap size wrong estimation (local) 29458100 29466179 107456 115534 NC_000014.9 velvet.59679 99.94 True fake: scaffold gap size wrong estimation (local) 29466414 29477350 116609 128441 NC_000014.9 velvet.59679 99.75 True fake: scaffold gap size wrong estimation (local) 29481508 29483035 128452 129979 NC_000014.9 velvet.59679 99.87 True fake: scaffold gap size wrong estimation (local) 29485124 29486501 132792 134169 NC_000014.9 velvet.59679 99.85 True fake: scaffold gap size wrong estimation (local) 29487076 29487708 135366 135998 NC_000014.9 velvet.59679 99.84 True relocation, scaffold gap is present, inconsistency = -10354 29477365 29478146 136009 136789 NC_000014.9 velvet.59679 99.87 True fake: scaffold gap size wrong estimation (local) 29487981 29492409 141043 145471 NC_000014.9 velvet.59679 99.91 True fake: scaffold gap size wrong estimation (local) 29492684 29499053 146563 153720 NC_000014.9 velvet.59679 99.97 True fake: scaffold gap size wrong estimation (local) 29499342 29506771 154867 162521 NC_000014.9 velvet.59679 99.93 True fake: scaffold gap size wrong estimation (local) 29516423 29519457 165957 168991 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 29520423 29523534 170784 173895 NC_000014.9 velvet.59679 99.94 True fake: scaffold gap size wrong estimation (local) 29525054 29526562 176226 177734 NC_000014.9 velvet.59679 99.93 True fake: scaffold gap size wrong estimation (local) 29526832 29529970 178794 181933 NC_000014.9 velvet.59679 99.94 True fake: scaffold gap size wrong estimation (local) 29533212 29534784 181944 183507 NC_000014.9 velvet.59679 99.36 True local misassembly 29530249 29533190 183591 186532 NC_000014.9 velvet.59679 99.76 True fake: scaffold gap size wrong estimation (local) 29537409 29538405 186548 187544 NC_000014.9 velvet.59679 100.0 True local misassembly 29536041 29537395 187555 188909 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 29539750 29541940 191123 193302 NC_000014.9 velvet.59679 99.36 True fake: scaffold gap size wrong estimation (local) 29542072 29544464 194120 196527 NC_000014.9 velvet.59679 99.0 True fake: scaffold gap size wrong estimation (local) 29544695 29547017 197647 199969 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 29547812 29549633 201649 203470 NC_000014.9 velvet.59679 99.4 True fake: scaffold gap size wrong estimation (local) 29549917 29550487 203586 204156 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 29550792 29553236 205652 208097 NC_000014.9 velvet.59679 99.88 True fake: scaffold gap size wrong estimation (local) 29553257 29553870 209198 209811 NC_000014.9 velvet.59679 100.0 True local misassembly 29554140 29555773 209812 211445 NC_000014.9 velvet.59679 99.2 True fake: scaffold gap size wrong estimation (local) 29556007 29557873 212337 214203 NC_000014.9 velvet.59679 99.95 True fake: scaffold gap size wrong estimation (local) 29558163 29560092 215108 217037 NC_000014.9 velvet.59679 99.84 True local misassembly 29560315 29561728 217038 218451 NC_000014.9 velvet.59679 99.29 True fake: scaffold gap size wrong estimation (local) 29562011 29564530 219656 222175 NC_000014.9 velvet.59679 99.96 True fake: scaffold gap size wrong estimation (local) 29564641 29566488 223081 224927 NC_000014.9 velvet.59679 99.84 True indel: indel (> 5bp) 29566917 29567442 225280 225805 NC_000014.9 velvet.59679 98.1 True fake: scaffold gap size wrong estimation (local) 29568108 29583690 226635 243963 NC_000014.9 velvet.59679 99.89 True fake: scaffold gap size wrong estimation (local) 29583715 29586669 244759 247707 NC_000014.9 velvet.59679 99.69 True fake: scaffold gap size wrong estimation (local) 29586927 29590811 248648 252996 NC_000014.9 velvet.59679 99.97 True fake: scaffold gap size wrong estimation (local) 29591080 29596489 253973 259513 NC_000014.9 velvet.59679 99.96 True fake: scaffold gap size wrong estimation (local) 29596649 29598055 260132 261538 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 29598343 29602491 262376 267153 NC_000014.9 velvet.59679 99.93 True fake: scaffold gap size wrong estimation (local) 29602732 29606149 268007 271424 NC_000014.9 velvet.59679 99.85 True fake: scaffold gap size wrong estimation (local) 29606317 29609503 272367 275553 NC_000014.9 velvet.59679 99.84 True fake: scaffold gap size wrong estimation (local) 29609861 29612835 276687 279776 NC_000014.9 velvet.59679 99.83 True fake: scaffold gap size wrong estimation (local) 29613110 29614705 280622 282217 NC_000014.9 velvet.59679 99.87 True fake: scaffold gap size wrong estimation (local) 29614993 29617919 283040 286113 NC_000014.9 velvet.59679 99.64 True fake: scaffold gap size wrong estimation (local) 29618476 29619880 287237 288633 NC_000014.9 velvet.59679 99.35 True fake: scaffold gap size wrong estimation (local) 29622694 29626732 291757 295795 NC_000014.9 velvet.59679 99.88 True fake: scaffold gap size wrong estimation (local) 29627013 29630217 296853 300058 NC_000014.9 velvet.59679 99.62 True fake: scaffold gap size wrong estimation (local) 29630356 29631514 300725 301883 NC_000014.9 velvet.59679 99.83 True fake: scaffold gap size wrong estimation (local) 29632124 29634789 303115 305780 NC_000014.9 velvet.59679 99.92 True fake: scaffold gap size wrong estimation (local) 29635065 29639113 306690 311138 NC_000014.9 velvet.59679 99.8 True fake: scaffold gap size wrong estimation (local) 29639676 29641916 312529 314769 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 29642206 29647991 315750 321577 NC_000014.9 velvet.59679 99.91 True fake: scaffold gap size wrong estimation (local) 29648957 29650780 323123 324946 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 29650781 29651660 325162 326041 NC_000014.9 velvet.59679 99.89 True relocation, scaffold gap is present, inconsistency = 42551500 72203177 72203836 326058 326717 NC_000014.9 velvet.59679 99.85 True fake: scaffold gap size wrong estimation (local) 72204115 72208948 327947 332813 NC_000014.9 velvet.59679 98.95 True fake: scaffold gap size wrong estimation (local) 72209236 72218638 333928 343654 NC_000014.9 velvet.59679 99.47 True fake: scaffold gap size wrong estimation (local) 72218902 72224173 344458 350236 NC_000014.9 velvet.59679 99.81 True relocation, scaffold gap is present, inconsistency = 27170395 99395723 99399735 355403 351391 NC_000014.9 velvet.59679 99.95 True relocation, scaffold gap is present, inconsistency = 8761254 90631840 90633913 358032 355959 NC_000014.9 velvet.59679 99.81 True relocation, scaffold gap is present, inconsistency = 33448455 57180750 57181330 360087 360667 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 57181499 57183552 361100 363202 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 57183784 57186273 364128 366617 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 57186557 57191758 367701 372958 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 57199119 57199770 375238 375889 NC_000014.9 velvet.59679 100.0 True relocation, scaffold gap is present, inconsistency = 42172356 99372137 99372989 376752 375900 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 99371045 99371909 378585 377721 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 99370214 99370761 379904 379357 NC_000014.9 velvet.59679 98.18 True local misassembly 99369434 99370009 380480 379905 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 99368661 99369380 381527 380808 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 99366651 99367653 384210 383208 NC_000014.9 velvet.59679 99.0 True fake: not a misassembly (possible transposable element) 90564805 90565354 385090 384534 NC_000014.9 velvet.59679 99.63 True fake: not a misassembly (possible transposable element) 99362350 99365175 390721 387896 NC_000014.9 velvet.59679 99.93 True fake: scaffold gap size wrong estimation (local) 99329672 99332206 422100 418987 NC_000014.9 velvet.59679 99.56 True relocation, scaffold gap is present, inconsistency = 8835830 90488399 90492582 423360 427543 NC_000014.9 velvet.59679 99.83 True relocation, scaffold gap is present, inconsistency = 8801513 99296245 99297866 429693 431314 NC_000014.9 velvet.59679 99.26 True relocation, scaffold gap is present, inconsistency = 21857 99319734 99328395 439986 431325 NC_000014.9 velvet.59679 99.77 True relocation, scaffold gap is present, inconsistency = 43328958 55981815 55988185 448947 442577 NC_000014.9 velvet.59679 100.0 True relocation, scaffold gap is present, inconsistency = 1740562 57728758 57730403 448958 450603 NC_000014.9 velvet.59679 99.82 True indel: indel (> 5bp) 57730798 57733360 450984 453546 NC_000014.9 velvet.59679 99.92 True indel: stretch of mismatches 57733833 57735031 454019 455217 NC_000014.9 velvet.59679 99.92 True fake: scaffold gap size wrong estimation (local) 57735032 57736948 455397 457313 NC_000014.9 velvet.59679 98.8 True indel: indel (> 5bp) 57737130 57738838 457487 459195 NC_000014.9 velvet.59679 95.49 True fake: scaffold gap size wrong estimation (local) 57738839 57739915 461728 462804 NC_000014.9 velvet.59679 98.79 True fake: scaffold gap size wrong estimation (local) 57740142 57740958 463189 464005 NC_000014.9 velvet.59679 99.76 True relocation, scaffold gap is present, inconsistency = 41546109 99292845 99294727 471664 469783 NC_000014.9 velvet.59679 99.89 True fake: scaffold gap size wrong estimation (local) 99288878 99292618 475709 471855 NC_000014.9 velvet.59679 98.84 True fake: scaffold gap size wrong estimation (local) 99285344 99287835 480057 477527 NC_000014.9 velvet.59679 98.26 True relocation, scaffold gap is present, inconsistency = 30865054 68419461 68420279 480068 480886 NC_000014.9 velvet.59679 99.88 True relocation, scaffold gap is present, inconsistency = 12464441 55950719 55955009 485187 480897 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 55947508 55950501 489164 486111 NC_000014.9 velvet.59679 97.74 True fake: scaffold gap size wrong estimation (local) 55936643 55947184 500940 490296 NC_000014.9 velvet.59679 99.92 True fake: scaffold gap size wrong estimation (local) 55934898 55936351 503426 501973 NC_000014.9 velvet.59679 100.0 True relocation, scaffold gap is present, inconsistency = 16309024 72245386 72246661 503437 504711 NC_000014.9 velvet.59679 99.76 True fake: scaffold gap size wrong estimation (local) 72246940 72249798 505559 508417 NC_000014.9 velvet.59679 99.86 True fake: scaffold gap size wrong estimation (local) 72250429 72256697 509792 516227 NC_000014.9 velvet.59679 99.82 True fake: scaffold gap size wrong estimation (local) 72259940 72267048 516238 523415 NC_000014.9 velvet.59679 99.9 True relocation, scaffold gap is present, inconsistency = -10360 72256699 72259650 523426 526377 NC_000014.9 velvet.59679 99.9 True relocation, scaffold gap is present, inconsistency = -42583166 29676642 29677631 526535 527524 NC_000014.9 velvet.59679 100.0 True relocation, scaffold gap is present, inconsistency = 42593567 72271274 72272864 527600 529280 NC_000014.9 velvet.59679 97.28 True fake: scaffold gap size wrong estimation (local) 72273045 72276527 530087 533569 NC_000014.9 velvet.59679 99.94 True fake: scaffold gap size wrong estimation (local) 72276687 72277342 534215 534870 NC_000014.9 velvet.59679 99.85 True fake: scaffold gap size wrong estimation (local) 72277912 72281163 535951 539202 NC_000014.9 velvet.59679 99.97 True fake: scaffold gap size wrong estimation (local) 72281451 72283381 540279 542209 NC_000014.9 velvet.59679 99.9 True fake: scaffold gap size wrong estimation (local) 72285582 72286531 544994 545943 NC_000014.9 velvet.59679 99.79 True fake: scaffold gap size wrong estimation (local) 72287761 72289347 547815 549401 NC_000014.9 velvet.59679 99.87 True relocation, scaffold gap is present, inconsistency = 40684700 31602406 31603050 550056 549412 NC_000014.9 velvet.59679 99.84 True relocation, scaffold gap is present, inconsistency = -67681028 99282249 99282926 551241 550564 NC_000014.9 velvet.59679 98.53 True local misassembly 99281320 99281972 551894 551242 NC_000014.9 velvet.59679 100.0 True relocation, scaffold gap is present, inconsistency = 69597151 29679904 29684158 551905 556159 NC_000014.9 velvet.59679 99.91 True relocation, scaffold gap is present, inconsistency = 39868962 69553131 69554398 557437 556170 NC_000014.9 velvet.59679 99.92 True fake: not a misassembly (possible transposable element) 65316833 65317579 557448 558194 NC_000014.9 velvet.59679 100.0 True fake: not a misassembly (possible transposable element) 69555317 69556253 559143 558207 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (extensive) 69545630 69547302 560945 559272 NC_000014.9 velvet.59679 99.76 True relocation, scaffold gap is present, inconsistency = -7197 69550561 69552816 563211 560956 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 69547589 69550268 567996 565329 NC_000014.9 velvet.59679 99.42 True relocation, scaffold gap is present, inconsistency = 16724852 52821733 52822726 569000 568007 NC_000014.9 velvet.59679 100.0 True relocation, scaffold gap is present, inconsistency = 19479113 72303494 72304621 570655 571782 NC_000014.9 velvet.59679 99.73 True local misassembly 72304887 72305925 571783 572821 NC_000014.9 velvet.59679 99.04 True relocation, scaffold gap is present, inconsistency = 2731755 69566340 69573047 579844 572906 NC_000014.9 velvet.59679 99.94 True fake: scaffold gap size wrong estimation (local) 69563309 69566156 583729 580883 NC_000014.9 velvet.59679 99.89 True relocation, scaffold gap is present, inconsistency = 6957209 76524570 76526165 584934 586529 NC_000014.9 velvet.59679 99.94 True fake: scaffold gap size wrong estimation (local) 76526864 76528456 588079 589671 NC_000014.9 velvet.59679 99.37 True fake: scaffold gap size wrong estimation (local) 76529048 76529700 591176 591828 NC_000014.9 velvet.59679 99.85 True relocation, scaffold gap is present, inconsistency = -15500321 61029393 61030287 591842 592736 NC_000014.9 velvet.59679 99.89 True fake: scaffold gap size wrong estimation (local) 61030288 61036367 592787 598866 NC_000014.9 velvet.59679 99.64 True fake: not a misassembly (possible transposable element) 33363963 33365222 599526 600785 NC_000014.9 velvet.59679 100.0 True fake: not a misassembly (possible transposable element) 61037002 61039386 600789 603173 NC_000014.9 velvet.59679 99.5 True relocation, inconsistency = -27674168 33365223 33367665 603178 605620 NC_000014.9 velvet.59679 99.71 True fake: scaffold gap size wrong estimation (local) 33367666 33369427 606232 607993 NC_000014.9 velvet.59679 98.81 True fake: scaffold gap size wrong estimation (local) 33369428 33371178 608063 609813 NC_000014.9 velvet.59679 99.37 True fake: scaffold gap size wrong estimation (local) 33371179 33373412 610595 612828 NC_000014.9 velvet.59679 98.52 True relocation, scaffold gap is present, inconsistency = 27666250 61039673 61040237 612839 613403 NC_000014.9 velvet.59679 99.82 True fake: scaffold gap size wrong estimation (local) 61040776 61045647 614109 619743 NC_000014.9 velvet.59679 98.87 True fake: scaffold gap size wrong estimation (local) 61045918 61053205 620784 628047 NC_000014.9 velvet.59679 99.6 True fake: scaffold gap size wrong estimation (local) 61073163 61075802 643539 646251 NC_000014.9 velvet.59679 99.5 True fake: scaffold gap size wrong estimation (local) 61076155 61078741 647329 649915 NC_000014.9 velvet.59679 99.96 True fake: scaffold gap size wrong estimation (local) 61079439 61081488 651473 653522 NC_000014.9 velvet.59679 99.95 True fake: scaffold gap size wrong estimation (local) 61081696 61088507 654563 661447 NC_000014.9 velvet.59679 99.96 True fake: scaffold gap size wrong estimation (local) 61088706 61091026 662365 664685 NC_000014.9 velvet.59679 99.91 True fake: scaffold gap size wrong estimation (local) 61098708 61099661 669180 670171 NC_000014.9 velvet.59679 99.89 True relocation, scaffold gap is present, inconsistency = 862063 60231868 60236634 674948 670182 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 60230463 60231506 677075 676032 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 60228923 60230189 678722 677456 NC_000014.9 velvet.59679 100.0 True relocation, scaffold gap is present, inconsistency = 37560614 97795824 97799045 683743 686964 NC_000014.9 velvet.59679 99.84 True relocation, scaffold gap is present, inconsistency = -37587052 60212004 60213870 686975 688841 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 60213938 60218099 689749 693910 NC_000014.9 velvet.59679 100.0 True inversion, scaffold gap is present 60202908 60210053 701058 693921 NC_000014.9 velvet.59679 99.86 True relocation, scaffold gap is present, inconsistency = -10343 60210936 60211819 703373 702490 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (extensive) 60201611 60202408 704552 703755 NC_000014.9 velvet.59679 100.0 True relocation, scaffold gap is present, inconsistency = -117753 60318739 60319353 705158 704563 NC_000014.9 velvet.59679 96.69 True fake: scaffold gap size wrong estimation (local) 60312225 60318472 712974 706059 NC_000014.9 velvet.59679 100.0 True relocation, scaffold gap is present, inconsistency = 110875 60199957 60200505 714367 713819 NC_000014.9 velvet.59679 100.0 True relocation, scaffold gap is present, inconsistency = 37471 60237987 60239705 714378 716096 NC_000014.9 velvet.59679 100.0 True relocation, scaffold gap is present, inconsistency = 44610476 104855427 104857888 723842 721342 NC_000014.9 velvet.59679 99.46 True fake: scaffold gap size wrong estimation (local) 104849188 104849811 725773 725150 NC_000014.9 velvet.59679 99.68 True local misassembly 104853003 104854329 727129 725803 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 104851611 104852739 729890 728761 NC_000014.9 velvet.59679 99.73 True fake: scaffold gap size wrong estimation (local) 104842314 104847042 737450 732730 NC_000014.9 velvet.59679 99.62 True fake: not a misassembly (possible transposable element) 38916896 38918245 737597 738953 NC_000014.9 velvet.59679 95.41 True fake: not a misassembly (possible transposable element) 104840958 104841888 740070 739140 NC_000014.9 velvet.59679 98.93 True relocation, scaffold gap is present, inconsistency = 44765813 60059668 60060354 754861 755547 NC_000014.9 velvet.59679 99.85 True fake: scaffold gap size wrong estimation (local) 60061332 60062908 757541 759117 NC_000014.9 velvet.59679 99.81 True fake: scaffold gap size wrong estimation (local) 60063476 60065130 760642 762296 NC_000014.9 velvet.59679 99.82 True fake: scaffold gap size wrong estimation (local) 60079388 60080934 772341 773887 NC_000014.9 velvet.59679 99.87 True relocation, scaffold gap is present, inconsistency = -15634 60065714 60069169 774301 778552 NC_000014.9 velvet.59679 99.62 True fake: scaffold gap size wrong estimation (local) 60069998 60073739 780119 783800 NC_000014.9 velvet.59679 98.17 True fake: scaffold gap size wrong estimation (local) 60104869 60107130 812448 814705 NC_000014.9 velvet.59679 99.69 True fake: scaffold gap size wrong estimation (local) 60108798 60109507 817270 817979 NC_000014.9 velvet.59679 99.86 True fake: scaffold gap size wrong estimation (local) 60109741 60112931 818883 822073 NC_000014.9 velvet.59679 99.84 True relocation, scaffold gap is present, inconsistency = 63526 60179001 60182357 827973 824617 NC_000014.9 velvet.59679 100.0 True relocation, scaffold gap is present, inconsistency = 16769396 76951764 76952281 827984 828501 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 76953208 76953940 829548 830280 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 76954462 76955316 831077 831926 NC_000014.9 velvet.59679 98.95 True fake: scaffold gap size wrong estimation (local) 76955478 76957912 832817 835251 NC_000014.9 velvet.59679 99.88 True fake: scaffold gap size wrong estimation (local) 76958147 76959841 836343 838037 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 76960096 76960670 838178 838752 NC_000014.9 velvet.59679 100.0 True relocation, scaffold gap is present, inconsistency = 27872165 104834656 104835320 841238 840573 NC_000014.9 velvet.59679 99.85 True fake: scaffold gap size wrong estimation (local) 104832161 104832703 844665 844123 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 104830755 104831396 846311 845670 NC_000014.9 velvet.59679 99.84 True fake: scaffold gap size wrong estimation (local) 104828934 104829678 848436 847692 NC_000014.9 velvet.59679 99.87 True fake: scaffold gap size wrong estimation (local) 104826734 104828329 850971 849376 NC_000014.9 velvet.59679 99.94 True fake: scaffold gap size wrong estimation (local) 104825687 104826594 852937 852030 NC_000014.9 velvet.59679 99.67 True fake: scaffold gap size wrong estimation (local) 104820119 104823434 859944 855767 NC_000014.9 velvet.59679 99.91 True fake: scaffold gap size wrong estimation (local) 104819143 104820015 860959 860087 NC_000014.9 velvet.59679 96.79 True local misassembly 104817778 104818977 862159 860960 NC_000014.9 velvet.59679 99.83 True fake: not a misassembly (possible transposable element) 60177189 60178984 864583 862789 NC_000014.9 velvet.59679 99.78 True fake: not a misassembly (possible transposable element) 104815272 104817107 866429 864594 NC_000014.9 velvet.59679 99.89 True fake: scaffold gap size wrong estimation (local) 104811889 104812429 870176 869636 NC_000014.9 velvet.59679 100.0 True local misassembly 104813241 104814667 872040 870614 NC_000014.9 velvet.59679 99.79 True relocation, scaffold gap is present, inconsistency = 44637130 60172115 60176100 876119 872051 NC_000014.9 velvet.59679 99.0 True relocation, scaffold gap is present, inconsistency = 81907 60263230 60269595 881342 887785 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 60272074 60272583 890781 891290 NC_000014.9 velvet.59679 99.61 True fake: scaffold gap size wrong estimation (local) 60272724 60275870 892112 895752 NC_000014.9 velvet.59679 99.65 True relocation, scaffold gap is present, inconsistency = 16711019 76991955 76992778 900818 901641 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (extensive) 77002180 77003371 902293 903484 NC_000014.9 velvet.59679 99.92 True fake: scaffold gap size wrong estimation (local) 77003646 77006486 904356 907192 NC_000014.9 velvet.59679 99.72 True relocation, scaffold gap is present, inconsistency = -13794 76995062 76997808 909562 912305 NC_000014.9 velvet.59679 99.78 True fake: scaffold gap size wrong estimation (local) 76998089 76999832 913270 915013 NC_000014.9 velvet.59679 99.89 True fake: scaffold gap size wrong estimation (local) 77000084 77001623 915846 917385 NC_000014.9 velvet.59679 99.87 True relocation, scaffold gap is present, inconsistency = 16857360 60138099 60142713 922010 917396 NC_000014.9 velvet.59679 99.98 True fake: scaffold gap size wrong estimation (local) 60135822 60137802 925015 923035 NC_000014.9 velvet.59679 99.95 True fake: scaffold gap size wrong estimation (local) 60130921 60135569 930660 926004 NC_000014.9 velvet.59679 100.0 True fake: scaffold gap size wrong estimation (local) 60100567 60104041 958859 955399 NC_000014.9 velvet.59679 99.08 True fake: scaffold gap size wrong estimation (local) 60098932 60099773 961377 960536 NC_000014.9 velvet.59679 100.0 True CONTIG velvet.59679 961377 misassembled 20657533 20661883 1 5184 NC_000014.9 velvet.59681 98.93 True relocation, scaffold gap is present, inconsistency = 80497756 101160285 101163803 5830 9348 NC_000014.9 velvet.59681 99.97 True fake: scaffold gap size wrong estimation (local) 101164055 101167196 10340 13786 NC_000014.9 velvet.59681 99.97 True relocation, scaffold gap is present, inconsistency = -80453694 20737310 20738218 37594 38502 NC_000014.9 velvet.59681 99.89 True relocation, scaffold gap is present, inconsistency = 9114 20747343 20748699 39869 38513 NC_000014.9 velvet.59681 99.71 True fake: not a misassembly (possible transposable element) 20694595 20695145 39880 40430 NC_000014.9 velvet.59681 100.0 True fake: not a misassembly (possible transposable element) 20745566 20747026 43337 41877 NC_000014.9 velvet.59681 99.52 True relocation, scaffold gap is present, inconsistency = 43395 20695426 20701139 44369 50082 NC_000014.9 velvet.59681 99.91 True fake: not a misassembly (possible transposable element) 19976963 19978185 58026 59248 NC_000014.9 velvet.59681 99.84 True fake: not a misassembly (possible transposable element) 20718573 20719611 61980 63018 NC_000014.9 velvet.59681 100.0 True inversion, scaffold gap is present 20717029 20717535 63535 63029 NC_000014.9 velvet.59681 99.8 True relocation, scaffold gap is present, inconsistency = -52773 20768663 20769316 64674 64021 NC_000014.9 velvet.59681 99.54 True fake: scaffold gap size wrong estimation (local) 20766444 20766990 68106 67560 NC_000014.9 velvet.59681 99.45 True fake: scaffold gap size wrong estimation (local) 20763893 20765496 71505 69902 NC_000014.9 velvet.59681 100.0 True fake: scaffold gap size wrong estimation (local) 20761941 20763646 74143 72438 NC_000014.9 velvet.59681 99.77 True fake: scaffold gap size wrong estimation (local) 20760394 20761684 76251 74961 NC_000014.9 velvet.59681 99.92 True fake: scaffold gap size wrong estimation (local) 20757186 20759671 80132 77678 NC_000014.9 velvet.59681 98.67 True relocation, scaffold gap is present, inconsistency = -12499 20786257 20787598 119217 120557 NC_000014.9 velvet.59681 99.78 True fake: scaffold gap size wrong estimation (local) 20787862 20788411 121654 122203 NC_000014.9 velvet.59681 99.82 True local misassembly 20788638 20789744 122204 123310 NC_000014.9 velvet.59681 99.01 True fake: scaffold gap size wrong estimation (local) 20790458 20791027 125065 125634 NC_000014.9 velvet.59681 97.72 True fake: scaffold gap size wrong estimation (local) 20791643 20792192 126340 126889 NC_000014.9 velvet.59681 99.82 True fake: scaffold gap size wrong estimation (local) 20792350 20792866 127593 128109 NC_000014.9 velvet.59681 100.0 True fake: scaffold gap size wrong estimation (local) 20793639 20794991 128898 130250 NC_000014.9 velvet.59681 99.19 True fake: scaffold gap size wrong estimation (local) 20797083 20798915 133071 134882 NC_000014.9 velvet.59681 98.68 True fake: scaffold gap size wrong estimation (local) 20824546 20825208 154848 155510 NC_000014.9 velvet.59681 99.55 True local misassembly 20819145 20819658 155521 156034 NC_000014.9 velvet.59681 100.0 True local misassembly 20819916 20820679 156035 156798 NC_000014.9 velvet.59681 98.69 True relocation, scaffold gap is present, inconsistency = 1781342 22621729 22623768 178545 176506 NC_000014.9 velvet.59681 99.9 True relocation, scaffold gap is present, inconsistency = 1766583 20852006 20854236 179455 181685 NC_000014.9 velvet.59681 99.87 True fake: scaffold gap size wrong estimation (local) 20854510 20856336 182687 184513 NC_000014.9 velvet.59681 100.0 True fake: scaffold gap size wrong estimation (local) 20856531 20860163 184728 189155 NC_000014.9 velvet.59681 99.5 True fake: scaffold gap size wrong estimation (local) 20887155 20887666 213303 213813 NC_000014.9 velvet.59681 99.0 True fake: scaffold gap size wrong estimation (local) 20889698 20890491 217092 217885 NC_000014.9 velvet.59681 99.75 True CONTIG velvet.59681 228867 misassembled 46437865 46438743 4256 3378 NC_000014.9 velvet.59682 100.0 True CONTIG velvet.59682 4256 correct 91523605 91524430 30188 29363 NC_000014.9 velvet.59685 99.88 True local misassembly 91524714 91525519 31300 30498 NC_000014.9 velvet.59685 99.38 True fake: scaffold gap size wrong estimation (local) 91521615 91522231 34962 34346 NC_000014.9 velvet.59685 100.0 True CONTIG velvet.59685 35027 correct 99302039 99305927 1827 5748 NC_000014.9 velvet.59709 98.68 True fake: scaffold gap size wrong estimation (local) 99306141 99306909 6557 7325 NC_000014.9 velvet.59709 100.0 True relocation, scaffold gap is present, inconsistency = -8758598 90549159 90550116 8173 9130 NC_000014.9 velvet.59709 99.9 True relocation, scaffold gap is present, inconsistency = -7876 90542251 90547702 9141 14592 NC_000014.9 velvet.59709 99.96 True fake: scaffold gap size wrong estimation (local) 90547784 90548871 15305 16392 NC_000014.9 velvet.59709 100.0 True fake: not a misassembly (possible transposable element) 99315813 99319534 16403 20113 NC_000014.9 velvet.59709 99.54 True fake: not a misassembly (possible transposable element) 90550127 90564376 20141 34387 NC_000014.9 velvet.59709 99.82 True relocation, scaffold gap is present, inconsistency = 8771221 99338486 99342388 37276 41178 NC_000014.9 velvet.59709 99.92 True fake: scaffold gap size wrong estimation (local) 99342609 99343755 43600 44746 NC_000014.9 velvet.59709 99.48 True indel: indel (> 5bp) 99343780 99344899 44747 45866 NC_000014.9 velvet.59709 99.73 True fake: scaffold gap size wrong estimation (local) 99345341 99347962 47073 49694 NC_000014.9 velvet.59709 99.92 True relocation, scaffold gap is present, inconsistency = -12356 99335617 99336253 49705 50341 NC_000014.9 velvet.59709 99.84 True relocation, scaffold gap is present, inconsistency = -42613793 56723323 56724469 51204 52350 NC_000014.9 velvet.59709 99.91 True relocation, scaffold gap is present, inconsistency = 33856445 90591301 90592452 62737 63888 NC_000014.9 velvet.59709 100.0 True fake: scaffold gap size wrong estimation (local) 90592740 90595079 65133 67431 NC_000014.9 velvet.59709 98.25 True fake: not a misassembly (possible transposable element) 90638137 90640034 67442 69339 NC_000014.9 velvet.59709 100.0 True fake: not a misassembly (possible transposable element) 90595349 90597403 69481 71535 NC_000014.9 velvet.59709 100.0 True fake: scaffold gap size wrong estimation (local) 90597693 90598892 72197 73396 NC_000014.9 velvet.59709 100.0 True fake: scaffold gap size wrong estimation (local) 90599146 90602461 74284 77599 NC_000014.9 velvet.59709 99.97 True relocation, scaffold gap is present, inconsistency = 10053 90613422 90618952 78507 84037 NC_000014.9 velvet.59709 99.98 True fake: scaffold gap size wrong estimation (local) 90619189 90622142 85086 87907 NC_000014.9 velvet.59709 95.4 True relocation, scaffold gap is present, inconsistency = 1921445 88694043 88697733 91749 87918 NC_000014.9 velvet.59709 96.33 True fake: scaffold gap size wrong estimation (local) 88664279 88665845 121058 119492 NC_000014.9 velvet.59709 100.0 True relocation, scaffold gap is present, inconsistency = 10857495 77806090 77806773 121069 121749 NC_000014.9 velvet.59709 99.56 True relocation, scaffold gap is present, inconsistency = 12795950 90602734 90608072 121760 127098 NC_000014.9 velvet.59709 100.0 True relocation, scaffold gap is present, inconsistency = 8771786 99379869 99388030 127109 135226 NC_000014.9 velvet.59709 99.42 True relocation, scaffold gap is present, inconsistency = -49122858 50266449 50267167 136503 137221 NC_000014.9 velvet.59709 100.0 True relocation, scaffold gap is present, inconsistency = 6491009 56758187 56761300 137232 140345 NC_000014.9 velvet.59709 99.97 True relocation, scaffold gap is present, inconsistency = 46680264 103441575 103442124 140356 140905 NC_000014.9 velvet.59709 99.82 True relocation, scaffold gap is present, inconsistency = 11848903 91591328 91592568 142249 141009 NC_000014.9 velvet.59709 99.92 True relocation, scaffold gap is present, inconsistency = 29863547 61726122 61727770 142260 143908 NC_000014.9 velvet.59709 100.0 True fake: scaffold gap size wrong estimation (local) 61728053 61729219 145152 146318 NC_000014.9 velvet.59709 100.0 True relocation, scaffold gap is present, inconsistency = -4976218 56753012 56758167 146329 151484 NC_000014.9 velvet.59709 99.92 True fake: not a misassembly (possible transposable element) 90634794 90635506 151630 152342 NC_000014.9 velvet.59709 99.86 True fake: not a misassembly (possible transposable element) 56761583 56762763 152961 154141 NC_000014.9 velvet.59709 99.83 True relocation, scaffold gap is present, inconsistency = 33857726 90622729 90623796 156381 157448 NC_000014.9 velvet.59709 100.0 True fake: scaffold gap size wrong estimation (local) 90624009 90627024 158136 161151 NC_000014.9 velvet.59709 100.0 True relocation, scaffold gap is present, inconsistency = 4510470 95139004 95147301 162661 170951 NC_000014.9 velvet.59709 99.84 True fake: scaffold gap size wrong estimation (local) 95147432 95150231 171859 174658 NC_000014.9 velvet.59709 100.0 True fake: scaffold gap size wrong estimation (local) 95150473 95152961 175843 178331 NC_000014.9 velvet.59709 99.92 True relocation, scaffold gap is present, inconsistency = 7707628 102860600 102861237 178979 178342 NC_000014.9 velvet.59709 100.0 True relocation, scaffold gap is present, inconsistency = 3429056 99428615 99431523 179000 181908 NC_000014.9 velvet.59709 100.0 True fake: scaffold gap size wrong estimation (local) 99431773 99433471 182875 184573 NC_000014.9 velvet.59709 100.0 True relocation, scaffold gap is present, inconsistency = 3389526 102823008 102827451 189027 184584 NC_000014.9 velvet.59709 99.91 True relocation, scaffold gap is present, inconsistency = 12147182 90669892 90675815 189038 194961 NC_000014.9 velvet.59709 99.95 True relocation, scaffold gap is present, inconsistency = 8762443 99440100 99443278 196803 199981 NC_000014.9 velvet.59709 100.0 True relocation, scaffold gap is present, inconsistency = -9576 99433714 99434597 199993 200876 NC_000014.9 velvet.59709 100.0 True fake: scaffold gap size wrong estimation (local) 99434884 99435758 201867 202741 NC_000014.9 velvet.59709 100.0 True relocation, scaffold gap is present, inconsistency = 3334442 102786645 102787392 219933 219186 NC_000014.9 velvet.59709 99.87 True fake: scaffold gap size wrong estimation (local) 102784484 102786523 222711 220672 NC_000014.9 velvet.59709 99.75 True fake: scaffold gap size wrong estimation (local) 102782501 102784197 225488 223756 NC_000014.9 velvet.59709 99.94 True fake: scaffold gap size wrong estimation (local) 102778579 102781654 230515 227323 NC_000014.9 velvet.59709 99.93 True CONTIG velvet.59709 230515 misassembled 65848953 65854895 1509 7451 NC_000014.9 velvet.59742 99.92 True fake: scaffold gap size wrong estimation (local) 65860469 65861832 9867 11230 NC_000014.9 velvet.59742 100.0 True fake: scaffold gap size wrong estimation (local) 65875005 65886428 29684 41206 NC_000014.9 velvet.59742 98.88 True fake: scaffold gap size wrong estimation (local) 65887190 65888356 42648 43814 NC_000014.9 velvet.59742 99.57 True fake: scaffold gap size wrong estimation (local) 65888618 65891874 44639 47895 NC_000014.9 velvet.59742 99.97 True fake: scaffold gap size wrong estimation (local) 65892043 65892849 48831 49636 NC_000014.9 velvet.59742 98.88 True fake: scaffold gap size wrong estimation (local) 65921934 65923151 80304 81521 NC_000014.9 velvet.59742 100.0 True fake: scaffold gap size wrong estimation (local) 65923436 65924546 81804 82914 NC_000014.9 velvet.59742 99.82 True fake: scaffold gap size wrong estimation (extensive) 65933756 65935822 82925 84991 NC_000014.9 velvet.59742 99.9 True relocation, scaffold gap is present, inconsistency = -11221 65953217 65957168 113607 117558 NC_000014.9 velvet.59742 99.92 True relocation, scaffold gap is present, inconsistency = -9512 65947667 65952701 117569 122543 NC_000014.9 velvet.59742 98.66 True relocation, scaffold gap is present, inconsistency = -38810 65915039 65921792 123691 130724 NC_000014.9 velvet.59742 99.96 True fake: scaffold gap size wrong estimation (local) 65935843 65947525 143587 155269 NC_000014.9 velvet.59742 100.0 True relocation, scaffold gap is present, inconsistency = -488472 65459064 65463322 155280 159538 NC_000014.9 velvet.59742 99.98 True relocation, scaffold gap is present, inconsistency = 17842974 83306957 83310289 160199 163399 NC_000014.9 velvet.59742 95.71 True relocation, scaffold gap is present, inconsistency = -17353855 65957362 65978166 164327 185107 NC_000014.9 velvet.59742 99.79 True fake: scaffold gap size wrong estimation (local) 65982400 65982930 187529 188059 NC_000014.9 velvet.59742 100.0 True relocation, scaffold gap is present, inconsistency = 17393506 83377232 83378363 189986 188855 NC_000014.9 velvet.59742 100.0 True fake: scaffold gap size wrong estimation (local) 83370200 83376980 197527 190747 NC_000014.9 velvet.59742 99.96 True fake: scaffold gap size wrong estimation (local) 83358404 83369808 210831 198651 NC_000014.9 velvet.59742 99.96 True relocation, scaffold gap is present, inconsistency = 30675323 52681595 52682138 211774 212317 NC_000014.9 velvet.59742 100.0 True relocation, scaffold gap is present, inconsistency = -30128 52652021 52652743 212328 213041 NC_000014.9 velvet.59742 98.56 True fake: scaffold gap size wrong estimation (local) 52653026 52655119 214175 216268 NC_000014.9 velvet.59742 99.95 True fake: scaffold gap size wrong estimation (local) 52655396 52656467 216870 217941 NC_000014.9 velvet.59742 100.0 True fake: scaffold gap size wrong estimation (local) 52656886 52659847 218977 221938 NC_000014.9 velvet.59742 99.97 True relocation, scaffold gap is present, inconsistency = 13323151 65983187 65987771 222127 226711 NC_000014.9 velvet.59742 99.93 True local misassembly 65987772 65988810 228520 229558 NC_000014.9 velvet.59742 99.04 True fake: scaffold gap size wrong estimation (local) 65989035 65992290 230533 233838 NC_000014.9 velvet.59742 99.97 True relocation, scaffold gap is present, inconsistency = 25758048 91750349 91757920 233849 241413 NC_000014.9 velvet.59742 99.85 True fake: scaffold gap size wrong estimation (local) 91758020 91760846 242182 244960 NC_000014.9 velvet.59742 97.99 True fake: scaffold gap size wrong estimation (local) 91761702 91762647 246581 247526 NC_000014.9 velvet.59742 99.89 True fake: scaffold gap size wrong estimation (local) 91762700 91763288 247778 248366 NC_000014.9 velvet.59742 99.83 True fake: scaffold gap size wrong estimation (local) 91763594 91764421 251324 252151 NC_000014.9 velvet.59742 100.0 True fake: scaffold gap size wrong estimation (local) 91764422 91764995 252365 252938 NC_000014.9 velvet.59742 99.65 True relocation, scaffold gap is present, inconsistency = -39069649 52697967 52698685 255559 256277 NC_000014.9 velvet.59742 100.0 True fake: scaffold gap size wrong estimation (local) 52700145 52701634 259226 260715 NC_000014.9 velvet.59742 99.93 True relocation, scaffold gap is present, inconsistency = 39065469 91767132 91770766 260744 264553 NC_000014.9 velvet.59742 99.86 True fake: scaffold gap size wrong estimation (local) 91771099 91779014 265564 273516 NC_000014.9 velvet.59742 99.78 True fake: scaffold gap size wrong estimation (local) 91779695 91791852 275100 286915 NC_000014.9 velvet.59742 96.8 True fake: scaffold gap size wrong estimation (local) 91792141 91794267 287816 289946 NC_000014.9 velvet.59742 99.91 True relocation, scaffold gap is present, inconsistency = -39059206 52735072 52737852 289957 292737 NC_000014.9 velvet.59742 99.96 True fake: scaffold gap size wrong estimation (local) 52738081 52738985 293654 294558 NC_000014.9 velvet.59742 99.89 True relocation, scaffold gap is present, inconsistency = -21348556 31391440 31393261 295569 297390 NC_000014.9 velvet.59742 99.89 True fake: scaffold gap size wrong estimation (local) 31393952 31394545 298544 299137 NC_000014.9 velvet.59742 99.83 True fake: scaffold gap size wrong estimation (local) 31394816 31397403 299779 302422 NC_000014.9 velvet.59742 97.73 True fake: scaffold gap size wrong estimation (local) 31397783 31399577 303641 305435 NC_000014.9 velvet.59742 99.89 True fake: scaffold gap size wrong estimation (local) 31407907 31408874 307732 308699 NC_000014.9 velvet.59742 99.69 True fake: scaffold gap size wrong estimation (local) 31409590 31411892 310219 312569 NC_000014.9 velvet.59742 99.96 True fake: scaffold gap size wrong estimation (local) 31412881 31414923 314268 316310 NC_000014.9 velvet.59742 99.76 True fake: scaffold gap size wrong estimation (local) 31415139 31416007 319594 320462 NC_000014.9 velvet.59742 100.0 True fake: scaffold gap size wrong estimation (local) 31416412 31417316 320572 321476 NC_000014.9 velvet.59742 99.78 True fake: scaffold gap size wrong estimation (local) 31418128 31421821 323197 326942 NC_000014.9 velvet.59742 99.86 True fake: scaffold gap size wrong estimation (local) 31422846 31425384 328823 331364 NC_000014.9 velvet.59742 99.8 True fake: scaffold gap size wrong estimation (local) 31425649 31427548 332477 334376 NC_000014.9 velvet.59742 99.84 True fake: scaffold gap size wrong estimation (local) 31427828 31429236 335370 336779 NC_000014.9 velvet.59742 99.93 True fake: scaffold gap size wrong estimation (local) 31429727 31430332 336934 337539 NC_000014.9 velvet.59742 100.0 True fake: not a misassembly (possible transposable element) 52748005 52751900 337550 341443 NC_000014.9 velvet.59742 99.87 True fake: not a misassembly (possible transposable element) 31430349 31430935 342513 343099 NC_000014.9 velvet.59742 100.0 True fake: scaffold gap size wrong estimation (local) 31431552 31432115 343926 344489 NC_000014.9 velvet.59742 97.87 True fake: scaffold gap size wrong estimation (local) 31433679 31435064 346782 348167 NC_000014.9 velvet.59742 99.78 True fake: not a misassembly (possible transposable element) 52754505 52755126 348821 349442 NC_000014.9 velvet.59742 98.39 True fake: not a misassembly (possible transposable element) 31435303 31436619 349453 350768 NC_000014.9 velvet.59742 99.85 True relocation, scaffold gap is present, inconsistency = 21318752 52755417 52756268 350814 351661 NC_000014.9 velvet.59742 99.53 True fake: scaffold gap size wrong estimation (local) 52756981 52758599 353417 355035 NC_000014.9 velvet.59742 99.38 True local misassembly 52758836 52760103 355036 356303 NC_000014.9 velvet.59742 99.13 True relocation, scaffold gap is present, inconsistency = -21322777 31438606 31440271 357583 359247 NC_000014.9 velvet.59742 99.82 True fake: scaffold gap size wrong estimation (local) 31441547 31442232 361648 362333 NC_000014.9 velvet.59742 98.54 True local misassembly 31442431 31443271 362396 363236 NC_000014.9 velvet.59742 98.69 True fake: scaffold gap size wrong estimation (local) 31444129 31445250 364843 365964 NC_000014.9 velvet.59742 99.91 True fake: scaffold gap size wrong estimation (local) 31445530 31447231 366570 368268 NC_000014.9 velvet.59742 99.71 True fake: scaffold gap size wrong estimation (local) 31471726 31472769 387975 389018 NC_000014.9 velvet.59742 100.0 True fake: scaffold gap size wrong estimation (local) 31474119 31474899 391334 392114 NC_000014.9 velvet.59742 100.0 True fake: scaffold gap size wrong estimation (local) 31475120 31477545 392588 395056 NC_000014.9 velvet.59742 98.33 True fake: scaffold gap size wrong estimation (local) 31481139 31482176 399236 400273 NC_000014.9 velvet.59742 99.9 True fake: scaffold gap size wrong estimation (local) 31482734 31484993 401253 403556 NC_000014.9 velvet.59742 99.78 True fake: scaffold gap size wrong estimation (extensive) 31503207 31504581 413004 414361 NC_000014.9 velvet.59742 98.69 True fake: scaffold gap size wrong estimation (local) 31504944 31507546 415279 417881 NC_000014.9 velvet.59742 99.92 True local misassembly 31500665 31503121 417892 420348 NC_000014.9 velvet.59742 99.88 True fake: scaffold gap size wrong estimation (local) 31508111 31508719 421331 421939 NC_000014.9 velvet.59742 98.19 True fake: scaffold gap size wrong estimation (local) 31509893 31511299 423216 424648 NC_000014.9 velvet.59742 97.98 True relocation, scaffold gap is present, inconsistency = 21262331 52773641 52776591 424659 427918 NC_000014.9 velvet.59742 99.9 True fake: scaffold gap size wrong estimation (local) 52776859 52778993 428780 430914 NC_000014.9 velvet.59742 100.0 True fake: scaffold gap size wrong estimation (local) 52779100 52779615 431102 431617 NC_000014.9 velvet.59742 100.0 True fake: scaffold gap size wrong estimation (local) 52780386 52784942 432881 438614 NC_000014.9 velvet.59742 96.34 True fake: not a misassembly (possible transposable element) 31468662 31469183 438625 439146 NC_000014.9 velvet.59742 100.0 True fake: not a misassembly (possible transposable element) 52788411 52791595 439157 442335 NC_000014.9 velvet.59742 99.78 True relocation, scaffold gap is present, inconsistency = -21322115 31469491 31470731 442346 443586 NC_000014.9 velvet.59742 100.0 True fake: scaffold gap size wrong estimation (local) 31470981 31471718 444580 445317 NC_000014.9 velvet.59742 100.0 True relocation, scaffold gap is present, inconsistency = 21318423 52812733 52813303 467909 468479 NC_000014.9 velvet.59742 100.0 True local misassembly 52807987 52809051 468490 469554 NC_000014.9 velvet.59742 100.0 True fake: scaffold gap size wrong estimation (local) 52810856 52811614 472294 473052 NC_000014.9 velvet.59742 99.74 True fake: scaffold gap size wrong estimation (local) 52816374 52818563 479161 481350 NC_000014.9 velvet.59742 99.36 True local misassembly 52818857 52819686 481351 482180 NC_000014.9 velvet.59742 98.67 True relocation, scaffold gap is present, inconsistency = 27746619 80566936 80570150 482811 486025 NC_000014.9 velvet.59742 99.84 True fake: scaffold gap size wrong estimation (local) 80570412 80572993 487127 489700 NC_000014.9 velvet.59742 98.91 True fake: scaffold gap size wrong estimation (local) 80573216 80584163 490672 502005 NC_000014.9 velvet.59742 99.78 True fake: scaffold gap size wrong estimation (local) 80584438 80590612 502955 509900 NC_000014.9 velvet.59742 99.93 True fake: scaffold gap size wrong estimation (local) 80595829 80596712 516525 517402 NC_000014.9 velvet.59742 99.21 True fake: scaffold gap size wrong estimation (local) 80597045 80597551 518624 519130 NC_000014.9 velvet.59742 100.0 True fake: scaffold gap size wrong estimation (local) 80597678 80599288 519262 520922 NC_000014.9 velvet.59742 99.63 True fake: scaffold gap size wrong estimation (local) 80599577 80602525 521820 524763 NC_000014.9 velvet.59742 99.73 True relocation, scaffold gap is present, inconsistency = 64181 80666727 80667564 525621 524784 NC_000014.9 velvet.59742 99.76 True fake: scaffold gap size wrong estimation (local) 80633229 80636791 556221 552659 NC_000014.9 velvet.59742 99.89 True inversion, scaffold gap is present 80629186 80633251 556232 560297 NC_000014.9 velvet.59742 99.9 True relocation, scaffold gap is present, inconsistency = 3464761 77163708 77164414 561014 560308 NC_000014.9 velvet.59742 99.72 True relocation, scaffold gap is present, inconsistency = 45623795 31536151 31539902 561025 565786 NC_000014.9 velvet.59742 98.25 True fake: scaffold gap size wrong estimation (local) 31540595 31541048 566173 566674 NC_000014.9 velvet.59742 100.0 True fake: scaffold gap size wrong estimation (local) 31541299 31546491 567906 573098 NC_000014.9 velvet.59742 100.0 True relocation, scaffold gap is present, inconsistency = 49078171 80624673 80626208 573109 574644 NC_000014.9 velvet.59742 100.0 True local misassembly 80623651 80624325 574655 575329 NC_000014.9 velvet.59742 100.0 True fake: not a misassembly (possible transposable element) 31546567 31547866 575340 576617 NC_000014.9 velvet.59742 98.22 True fake: not a misassembly (possible transposable element) 80627767 80629064 577012 578309 NC_000014.9 velvet.59742 100.0 True local misassembly 80626889 80627766 581805 582682 NC_000014.9 velvet.59742 99.66 True relocation, scaffold gap is present, inconsistency = -49078162 31550253 31551470 583331 584548 NC_000014.9 velvet.59742 100.0 True relocation, scaffold gap is present, inconsistency = -3345548 28214300 28215944 592926 594566 NC_000014.9 velvet.59742 99.7 True relocation, scaffold gap is present, inconsistency = 52396101 80612056 80612830 595351 594577 NC_000014.9 velvet.59742 99.87 True fake: scaffold gap size wrong estimation (local) 80602769 80611938 605059 595892 NC_000014.9 velvet.59742 99.89 True relocation, scaffold gap is present, inconsistency = 45715 80657664 80666736 605070 614246 NC_000014.9 velvet.59742 99.87 True relocation, scaffold gap is present, inconsistency = -49089036 31577711 31579281 614257 615827 NC_000014.9 velvet.59742 99.81 True relocation, scaffold gap is present, inconsistency = 49074019 80653311 80657029 615838 620460 NC_000014.9 velvet.59742 99.89 True relocation, scaffold gap is present, inconsistency = -49083977 31574876 31577440 622284 624848 NC_000014.9 velvet.59742 100.0 True fake: scaffold gap size wrong estimation (local) 31579313 31584214 627441 632420 NC_000014.9 velvet.59742 99.82 True fake: scaffold gap size wrong estimation (local) 31584422 31585134 633365 634077 NC_000014.9 velvet.59742 99.86 True CONTIG velvet.59742 662079 misassembled 89337900 89338538 639 1 NC_000014.9 velvet.59749 99.37 True fake: scaffold gap size wrong estimation (local) 89335100 89336133 4548 3536 NC_000014.9 velvet.59749 97.85 True fake: scaffold gap size wrong estimation (local) 89329873 89333145 11141 7201 NC_000014.9 velvet.59749 97.71 True fake: scaffold gap size wrong estimation (local) 89325357 89329576 16171 12142 NC_000014.9 velvet.59749 95.4 True fake: scaffold gap size wrong estimation (local) 89323720 89325207 18498 16839 NC_000014.9 velvet.59749 100.0 True fake: scaffold gap size wrong estimation (local) 89321219 89323006 21403 19636 NC_000014.9 velvet.59749 98.88 True fake: scaffold gap size wrong estimation (local) 89318390 89321003 25344 22731 NC_000014.9 velvet.59749 99.89 True relocation, scaffold gap is present, inconsistency = 30142579 59168101 59168657 33054 32498 NC_000014.9 velvet.59749 100.0 True fake: scaffold gap size wrong estimation (local) 59166835 59167707 34017 33145 NC_000014.9 velvet.59749 100.0 True relocation, scaffold gap is present, inconsistency = -30147047 89308159 89310824 39740 37075 NC_000014.9 velvet.59749 99.81 True fake: scaffold gap size wrong estimation (local) 89306641 89307981 41796 40456 NC_000014.9 velvet.59749 99.93 True fake: scaffold gap size wrong estimation (local) 89301755 89306323 47387 42648 NC_000014.9 velvet.59749 99.93 True fake: scaffold gap size wrong estimation (local) 89297561 89300178 53076 49911 NC_000014.9 velvet.59749 96.93 True relocation, scaffold gap is present, inconsistency = 30138821 59158129 59158729 53687 53087 NC_000014.9 velvet.59749 100.0 True fake: scaffold gap size wrong estimation (local) 59156713 59157830 55175 54058 NC_000014.9 velvet.59749 98.66 True fake: scaffold gap size wrong estimation (local) 59155576 59156712 56369 55233 NC_000014.9 velvet.59749 99.12 True local misassembly 59149816 59152676 59230 56370 NC_000014.9 velvet.59749 98.99 True fake: scaffold gap size wrong estimation (local) 59146408 59149815 63418 60011 NC_000014.9 velvet.59749 99.94 True fake: not a misassembly (possible transposable element) 59158822 59163964 63429 68571 NC_000014.9 velvet.59749 99.96 True fake: not a misassembly (possible transposable element) 59138710 59141026 70898 68582 NC_000014.9 velvet.59749 99.96 True relocation, scaffold gap is present, inconsistency = -30149927 89288071 89288626 71459 70909 NC_000014.9 velvet.59749 99.1 True relocation, scaffold gap is present, inconsistency = 23670 89312315 89313317 71478 72480 NC_000014.9 velvet.59749 100.0 True fake: scaffold gap size wrong estimation (local) 89313588 89315139 73405 74956 NC_000014.9 velvet.59749 99.29 True local misassembly 89315151 89316449 75188 76486 NC_000014.9 velvet.59749 99.15 True fake: scaffold gap size wrong estimation (local) 89316966 89318047 77562 78643 NC_000014.9 velvet.59749 99.54 True relocation, scaffold gap is present, inconsistency = 30170795 59143223 59146160 82086 78654 NC_000014.9 velvet.59749 99.83 True fake: scaffold gap size wrong estimation (local) 59141622 59142964 83954 82632 NC_000014.9 velvet.59749 98.35 True relocation, scaffold gap is present, inconsistency = 21294 59164269 59164925 83965 84621 NC_000014.9 velvet.59749 100.0 True relocation, scaffold gap is present, inconsistency = 30324 59126725 59128117 91841 90449 NC_000014.9 velvet.59749 100.0 True fake: scaffold gap size wrong estimation (local) 59120013 59126044 100005 93127 NC_000014.9 velvet.59749 99.88 True fake: scaffold gap size wrong estimation (local) 59116323 59118482 103656 101497 NC_000014.9 velvet.59749 99.95 True fake: scaffold gap size wrong estimation (local) 59114780 59115912 106004 104872 NC_000014.9 velvet.59749 99.91 True fake: scaffold gap size wrong estimation (local) 59113318 59114538 107625 106409 NC_000014.9 velvet.59749 99.59 True relocation, scaffold gap is present, inconsistency = 79447 59195446 59196488 109086 110118 NC_000014.9 velvet.59749 99.03 True fake: scaffold gap size wrong estimation (local) 59197214 59198214 110725 111725 NC_000014.9 velvet.59749 99.8 True fake: scaffold gap size wrong estimation (local) 59198535 59200930 112906 115301 NC_000014.9 velvet.59749 99.96 True relocation, scaffold gap is present, inconsistency = 97623 59097055 59100438 119623 115775 NC_000014.9 velvet.59749 99.94 True fake: scaffold gap size wrong estimation (local) 59096007 59096778 121047 120276 NC_000014.9 velvet.59749 99.87 True fake: scaffold gap size wrong estimation (local) 59093568 59095735 123863 121705 NC_000014.9 velvet.59749 99.54 True fake: scaffold gap size wrong estimation (local) 59090656 59093385 127594 124825 NC_000014.9 velvet.59749 99.96 True fake: scaffold gap size wrong estimation (local) 59087796 59090464 131236 128568 NC_000014.9 velvet.59749 99.7 True fake: scaffold gap size wrong estimation (local) 59084284 59087616 135574 132243 NC_000014.9 velvet.59749 99.88 True fake: scaffold gap size wrong estimation (local) 59080886 59084192 139555 136252 NC_000014.9 velvet.59749 99.79 True fake: scaffold gap size wrong estimation (local) 59078875 59080603 142377 140649 NC_000014.9 velvet.59749 100.0 True relocation, scaffold gap is present, inconsistency = 120227 59203294 59206294 144841 147840 NC_000014.9 velvet.59749 99.8 True fake: scaffold gap size wrong estimation (local) 59206557 59209691 148914 152072 NC_000014.9 velvet.59749 99.43 True fake: scaffold gap size wrong estimation (local) 59235783 59242612 175938 182767 NC_000014.9 velvet.59749 99.84 True fake: scaffold gap size wrong estimation (local) 59242856 59244192 183622 184958 NC_000014.9 velvet.59749 99.93 True fake: scaffold gap size wrong estimation (local) 59264711 59267905 203358 206469 NC_000014.9 velvet.59749 97.37 True fake: scaffold gap size wrong estimation (local) 59268200 59272323 207612 211735 NC_000014.9 velvet.59749 99.9 True fake: scaffold gap size wrong estimation (local) 59289785 59302681 226534 239590 NC_000014.9 velvet.59749 99.95 True CONTIG velvet.59749 239590 misassembled 42554976 42560155 240 5460 NC_000014.9 velvet.59761 99.65 True fake: scaffold gap size wrong estimation (local) 42560479 42563067 6575 9139 NC_000014.9 velvet.59761 98.95 True relocation, scaffold gap is present, inconsistency = 10544 42577500 42581676 13028 17228 NC_000014.9 velvet.59761 99.11 True fake: scaffold gap size wrong estimation (local) 42581964 42588770 18243 25795 NC_000014.9 velvet.59761 98.92 True fake: scaffold gap size wrong estimation (local) 42588985 42593572 26813 31400 NC_000014.9 velvet.59761 99.93 True fake: scaffold gap size wrong estimation (local) 42595076 42595905 33518 34347 NC_000014.9 velvet.59761 99.88 True fake: not a misassembly (possible transposable element) 30316352 30318209 34358 36216 NC_000014.9 velvet.59761 100.0 True fake: not a misassembly (possible transposable element) 42595939 42598047 36752 38946 NC_000014.9 velvet.59761 100.0 True fake: scaffold gap size wrong estimation (local) 42598468 42603036 39684 45331 NC_000014.9 velvet.59761 99.84 True fake: scaffold gap size wrong estimation (local) 42603498 42605119 46108 47806 NC_000014.9 velvet.59761 100.0 True fake: scaffold gap size wrong estimation (local) 42605214 42606227 48450 49463 NC_000014.9 velvet.59761 100.0 True local misassembly 42606752 42608073 49818 51139 NC_000014.9 velvet.59761 100.0 True fake: scaffold gap size wrong estimation (local) 42608808 42613147 52521 57537 NC_000014.9 velvet.59761 98.33 True fake: scaffold gap size wrong estimation (local) 42613437 42619002 58632 64439 NC_000014.9 velvet.59761 99.95 True fake: scaffold gap size wrong estimation (local) 42619106 42628049 65281 74198 NC_000014.9 velvet.59761 99.69 True fake: scaffold gap size wrong estimation (local) 42628167 42636571 74829 83373 NC_000014.9 velvet.59761 99.92 True fake: scaffold gap size wrong estimation (local) 42636807 42643954 84351 93145 NC_000014.9 velvet.59761 96.61 True fake: scaffold gap size wrong estimation (local) 42647228 42648593 97799 99150 NC_000014.9 velvet.59761 98.89 True fake: scaffold gap size wrong estimation (local) 42648697 42656330 99232 108533 NC_000014.9 velvet.59761 99.93 True fake: scaffold gap size wrong estimation (local) 42657194 42658781 109985 111572 NC_000014.9 velvet.59761 99.18 True fake: scaffold gap size wrong estimation (local) 42659048 42659896 112801 113649 NC_000014.9 velvet.59761 100.0 True fake: not a misassembly (possible transposable element) 42661814 42665668 120360 116506 NC_000014.9 velvet.59761 99.95 True fake: not a misassembly (possible transposable element) 42666783 42676136 120371 129723 NC_000014.9 velvet.59761 99.9 True inversion, scaffold gap is present 42677438 42682323 134709 129775 NC_000014.9 velvet.59761 100.0 True fake: scaffold gap size wrong estimation (local) 42676118 42677246 136903 135775 NC_000014.9 velvet.59761 100.0 True inversion, scaffold gap is present 42682588 42686889 146002 150405 NC_000014.9 velvet.59761 99.98 True fake: scaffold gap size wrong estimation (local) 42688070 42692061 153654 157645 NC_000014.9 velvet.59761 99.65 True inversion, scaffold gap is present 42695304 42698205 161302 158401 NC_000014.9 velvet.59761 99.86 True fake: scaffold gap size wrong estimation (local) 42692580 42695119 164764 162225 NC_000014.9 velvet.59761 99.69 True inversion, scaffold gap is present 42698729 42704911 165332 171510 NC_000014.9 velvet.59761 99.77 True fake: scaffold gap size wrong estimation (local) 42709580 42725822 174868 191993 NC_000014.9 velvet.59761 99.96 True fake: scaffold gap size wrong estimation (local) 42726072 42727974 193090 194992 NC_000014.9 velvet.59761 100.0 True relocation, scaffold gap is present, inconsistency = 14692531 27992093 27998159 237185 230374 NC_000014.9 velvet.59761 98.76 True fake: scaffold gap size wrong estimation (local) 27987160 27991998 243028 238190 NC_000014.9 velvet.59761 99.88 True relocation, scaffold gap is present, inconsistency = 10722 27970739 27975171 244295 248727 NC_000014.9 velvet.59761 99.95 True fake: scaffold gap size wrong estimation (local) 27975380 27975958 249361 249939 NC_000014.9 velvet.59761 100.0 True fake: scaffold gap size wrong estimation (local) 27976296 27984688 250701 259838 NC_000014.9 velvet.59761 99.98 True inversion, scaffold gap is present 27968229 27968757 263219 262695 NC_000014.9 velvet.59761 98.68 True fake: scaffold gap size wrong estimation (local) 27964296 27965986 267811 266123 NC_000014.9 velvet.59761 99.88 True fake: scaffold gap size wrong estimation (local) 27947943 27958245 279641 268691 NC_000014.9 velvet.59761 99.98 True fake: scaffold gap size wrong estimation (local) 27943994 27947610 284791 280445 NC_000014.9 velvet.59761 99.97 True relocation, scaffold gap is present, inconsistency = 14830774 42781082 42785100 287489 291507 NC_000014.9 velvet.59761 99.55 True indel: indel (<= 5bp) 42785106 42785824 291508 292226 NC_000014.9 velvet.59761 99.17 True relocation, scaffold gap is present, inconsistency = 11083507 53869342 53876948 299844 292237 NC_000014.9 velvet.59761 99.82 True fake: scaffold gap size wrong estimation (local) 53867969 53868805 301752 300918 NC_000014.9 velvet.59761 99.52 True fake: scaffold gap size wrong estimation (local) 53859844 53867671 310292 302466 NC_000014.9 velvet.59761 99.87 True relocation, scaffold gap is present, inconsistency = 11040534 42804943 42810646 318956 325502 NC_000014.9 velvet.59761 99.88 True fake: scaffold gap size wrong estimation (local) 42810908 42811417 325752 326261 NC_000014.9 velvet.59761 99.8 True relocation, scaffold gap is present, inconsistency = 5650230 37159269 37159797 327670 327142 NC_000014.9 velvet.59761 100.0 True fake: scaffold gap size wrong estimation (local) 37151917 37154626 331057 327681 NC_000014.9 velvet.59761 98.52 True fake: scaffold gap size wrong estimation (local) 37148110 37149468 335295 333937 NC_000014.9 velvet.59761 99.85 True fake: scaffold gap size wrong estimation (local) 37145477 37147825 338702 336375 NC_000014.9 velvet.59761 98.93 True fake: scaffold gap size wrong estimation (extensive) 37135180 37136694 341738 340224 NC_000014.9 velvet.59761 99.93 True relocation, scaffold gap is present, inconsistency = 3239890 33894149 33894949 342079 342879 NC_000014.9 velvet.59761 98.75 True relocation, scaffold gap is present, inconsistency = 8924124 42819084 42819624 342890 343430 NC_000014.9 velvet.59761 100.0 True local misassembly 42819885 42820980 343431 344526 NC_000014.9 velvet.59761 99.0 True fake: scaffold gap size wrong estimation (local) 42821456 42822256 345497 346297 NC_000014.9 velvet.59761 99.75 True relocation, scaffold gap is present, inconsistency = 11031683 53856110 53859755 352113 348468 NC_000014.9 velvet.59761 99.95 True fake: scaffold gap size wrong estimation (local) 53830394 53832347 375861 373912 NC_000014.9 velvet.59761 98.87 True fake: scaffold gap size wrong estimation (local) 53825610 53830236 381557 376931 NC_000014.9 velvet.59761 99.87 True fake: scaffold gap size wrong estimation (local) 53818804 53825453 389169 382520 NC_000014.9 velvet.59761 99.94 True fake: scaffold gap size wrong estimation (local) 53818097 53818620 390634 390111 NC_000014.9 velvet.59761 100.0 True fake: scaffold gap size wrong estimation (local) 53817278 53817842 391350 390786 NC_000014.9 velvet.59761 100.0 True fake: scaffold gap size wrong estimation (local) 53804276 53815776 405528 393458 NC_000014.9 velvet.59761 99.94 True CONTIG velvet.59761 409273 misassembled 20042870 20045468 1437 4035 NC_000014.9 velvet.59763 99.77 True CONTIG velvet.59763 4035 correct CONTIG velvet.59788 254 unaligned 38164286 38165262 977 1 NC_000014.9 velvet.59817 99.9 True CONTIG velvet.59817 977 correct 57722211 57722779 3843 3274 NC_000014.9 velvet.59832 99.47 True fake: scaffold gap size wrong estimation (local) 57720073 57720828 7207 6452 NC_000014.9 velvet.59832 98.28 True local misassembly 57718849 57719594 8025 7280 NC_000014.9 velvet.59832 99.73 True fake: scaffold gap size wrong estimation (local) 57717615 57718570 10779 9824 NC_000014.9 velvet.59832 99.58 True relocation, scaffold gap is present, inconsistency = -24797 57711057 57717354 42011 35837 NC_000014.9 velvet.59832 97.73 True fake: scaffold gap size wrong estimation (local) 57710089 57710686 43741 43143 NC_000014.9 velvet.59832 99.83 True relocation, scaffold gap is present, inconsistency = -45313473 103021683 103022997 45686 44306 NC_000014.9 velvet.59832 95.22 True fake: not a misassembly (possible transposable element) 103017306 103019002 45697 47393 NC_000014.9 velvet.59832 99.94 True fake: not a misassembly (possible transposable element) 103019014 103021184 50128 47959 NC_000014.9 velvet.59832 99.95 True fake: scaffold gap size wrong estimation (local) 103009152 103009863 56928 56217 NC_000014.9 velvet.59832 99.86 True fake: not a misassembly (possible transposable element) 57676607 57678023 76250 74790 NC_000014.9 velvet.59832 98.58 True fake: not a misassembly (possible transposable element) 102980481 102981496 86114 85099 NC_000014.9 velvet.59832 99.02 True local misassembly 102979461 102980216 86870 86115 NC_000014.9 velvet.59832 100.0 True relocation, scaffold gap is present, inconsistency = 45265508 57693730 57695002 107093 105821 NC_000014.9 velvet.59832 99.92 True fake: not a misassembly (possible transposable element) 62423852 62427387 107104 110639 NC_000014.9 velvet.59832 99.94 True fake: not a misassembly (possible transposable element) 57689879 57693349 114122 110650 NC_000014.9 velvet.59832 99.86 True fake: scaffold gap size wrong estimation (local) 57682639 57689634 121937 114943 NC_000014.9 velvet.59832 99.79 True relocation, scaffold gap is present, inconsistency = 41657465 99348766 99352445 123604 127283 NC_000014.9 velvet.59832 99.89 True fake: scaffold gap size wrong estimation (local) 99352742 99355395 128358 131011 NC_000014.9 velvet.59832 99.89 True fake: scaffold gap size wrong estimation (local) 99355638 99357131 132160 133653 NC_000014.9 velvet.59832 99.93 True fake: scaffold gap size wrong estimation (local) 99359802 99360436 136928 137562 NC_000014.9 velvet.59832 98.43 True CONTIG velvet.59832 137566 misassembled 61847612 61848439 828 1 NC_000014.9 velvet.59837 99.76 True inversion, scaffold gap is present 61846477 61847380 2171 3073 NC_000014.9 velvet.59837 99.89 True CONTIG velvet.59837 3706 misassembled 25189478 25191450 1 1968 NC_000014.9 velvet.59860 99.54 True relocation, scaffold gap is present, inconsistency = -11348 25180113 25181042 1979 2908 NC_000014.9 velvet.59860 99.89 True fake: scaffold gap size wrong estimation (local) 25181312 25183456 4155 6299 NC_000014.9 velvet.59860 99.72 True fake: scaffold gap size wrong estimation (local) 25191472 25197644 9990 16262 NC_000014.9 velvet.59860 99.9 True fake: scaffold gap size wrong estimation (local) 25213723 25218992 30153 36294 NC_000014.9 velvet.59860 99.94 True fake: scaffold gap size wrong estimation (local) 25219186 25223045 37271 41130 NC_000014.9 velvet.59860 99.87 True relocation, scaffold gap is present, inconsistency = -25386 25197670 25199557 41141 43011 NC_000014.9 velvet.59860 98.72 True fake: scaffold gap size wrong estimation (local) 25200405 25202139 44738 46472 NC_000014.9 velvet.59860 99.88 True fake: scaffold gap size wrong estimation (local) 25202356 25203903 49147 50694 NC_000014.9 velvet.59860 99.87 True fake: scaffold gap size wrong estimation (extensive) 25223407 25227223 61575 65391 NC_000014.9 velvet.59860 99.9 True fake: scaffold gap size wrong estimation (local) 25227918 25229377 66756 68214 NC_000014.9 velvet.59860 99.32 True fake: not a misassembly (possible transposable element) 90150980 90151953 68225 69199 NC_000014.9 velvet.59860 100.0 True fake: not a misassembly (possible transposable element) 25229615 25230405 72457 73247 NC_000014.9 velvet.59860 100.0 True fake: scaffold gap size wrong estimation (local) 25230822 25231636 73387 74201 NC_000014.9 velvet.59860 99.88 True fake: scaffold gap size wrong estimation (local) 25231915 25232554 75316 75955 NC_000014.9 velvet.59860 100.0 True fake: scaffold gap size wrong estimation (local) 25232639 25234255 76087 77703 NC_000014.9 velvet.59860 100.0 True fake: scaffold gap size wrong estimation (local) 25235750 25242573 80012 86770 NC_000014.9 velvet.59860 98.97 True fake: scaffold gap size wrong estimation (local) 25242680 25253641 86781 99514 NC_000014.9 velvet.59860 99.26 True fake: scaffold gap size wrong estimation (extensive) 25261391 25262252 99741 100602 NC_000014.9 velvet.59860 100.0 True relocation, scaffold gap is present, inconsistency = -8086 25254177 25256391 100613 102827 NC_000014.9 velvet.59860 99.77 True relocation, scaffold gap is present, inconsistency = 19729072 44988262 44989808 105626 107172 NC_000014.9 velvet.59860 99.94 True relocation, scaffold gap is present, inconsistency = 45180790 90170609 90171782 107183 108350 NC_000014.9 velvet.59860 99.48 True fake: scaffold gap size wrong estimation (local) 90174899 90176778 112171 114051 NC_000014.9 velvet.59860 99.57 True fake: scaffold gap size wrong estimation (local) 90177136 90178254 115062 116180 NC_000014.9 velvet.59860 100.0 True fake: scaffold gap size wrong estimation (local) 90178620 90180897 117087 119364 NC_000014.9 velvet.59860 99.96 True fake: scaffold gap size wrong estimation (local) 90181157 90186274 120405 125548 NC_000014.9 velvet.59860 99.38 True fake: scaffold gap size wrong estimation (local) 90186514 90187340 126240 127066 NC_000014.9 velvet.59860 100.0 True fake: scaffold gap size wrong estimation (local) 90187455 90192857 127677 133079 NC_000014.9 velvet.59860 99.81 True relocation, scaffold gap is present, inconsistency = -64924860 25268023 25279716 133105 145074 NC_000014.9 velvet.59860 99.51 True relocation, scaffold gap is present, inconsistency = 58529198 83808925 83810349 146509 145085 NC_000014.9 velvet.59860 99.86 True relocation, scaffold gap is present, inconsistency = 58544149 25264237 25264765 146520 147048 NC_000014.9 velvet.59860 98.87 True fake: not a misassembly (possible transposable element) 90213085 90213743 150081 150739 NC_000014.9 velvet.59860 100.0 True fake: not a misassembly (possible transposable element) 25287179 25288537 170546 171904 NC_000014.9 velvet.59860 99.04 True fake: scaffold gap size wrong estimation (local) 25289123 25290407 173256 174540 NC_000014.9 velvet.59860 99.53 True fake: scaffold gap size wrong estimation (local) 25295392 25296376 174605 175589 NC_000014.9 velvet.59860 100.0 True fake: scaffold gap size wrong estimation (local) 25296992 25302913 176884 183726 NC_000014.9 velvet.59860 99.88 True relocation, scaffold gap is present, inconsistency = -23190 25280233 25280739 184236 184742 NC_000014.9 velvet.59860 99.8 True relocation, scaffold gap is present, inconsistency = 51874204 77158344 77159489 189288 188143 NC_000014.9 velvet.59860 99.91 True relocation, scaffold gap is present, inconsistency = 13052826 90215878 90217859 192851 194831 NC_000014.9 velvet.59860 99.9 True relocation, scaffold gap is present, inconsistency = -64914661 25303216 25303769 194849 195402 NC_000014.9 velvet.59860 100.0 True fake: scaffold gap size wrong estimation (local) 25304696 25305577 197125 198034 NC_000014.9 velvet.59860 95.95 True relocation, scaffold gap is present, inconsistency = 64902626 90218940 90219855 208771 209686 NC_000014.9 velvet.59860 99.78 True local misassembly 90220062 90220720 209756 210414 NC_000014.9 velvet.59860 98.48 True relocation, scaffold gap is present, inconsistency = 10718116 79498037 79499951 214323 212409 NC_000014.9 velvet.59860 99.9 True fake: scaffold gap size wrong estimation (local) 79496247 79497746 216694 215195 NC_000014.9 velvet.59860 99.93 True relocation, scaffold gap is present, inconsistency = -13367229 92859915 92862338 220255 217832 NC_000014.9 velvet.59860 99.92 True inversion, scaffold gap is present 92865063 92868469 220830 225223 NC_000014.9 velvet.59860 99.82 True relocation, scaffold gap is present, inconsistency = -13350274 79518206 79519785 225234 226813 NC_000014.9 velvet.59860 99.94 True fake: not a misassembly (possible transposable element) 67417886 67419588 228711 227009 NC_000014.9 velvet.59860 100.0 True fake: not a misassembly (possible transposable element) 79521046 79526080 229045 234069 NC_000014.9 velvet.59860 99.74 True fake: scaffold gap size wrong estimation (local) 79526333 79527030 234952 235649 NC_000014.9 velvet.59860 99.86 True fake: scaffold gap size wrong estimation (local) 79529518 79536671 238955 246214 NC_000014.9 velvet.59860 99.66 True fake: scaffold gap size wrong estimation (local) 79538571 79539085 248975 249487 NC_000014.9 velvet.59860 99.61 True fake: scaffold gap size wrong estimation (local) 79539313 79541166 249937 251790 NC_000014.9 velvet.59860 99.84 True fake: scaffold gap size wrong estimation (local) 79541400 79546059 252780 257570 NC_000014.9 velvet.59860 99.16 True relocation, scaffold gap is present, inconsistency = 12096601 67444040 67444788 258328 257581 NC_000014.9 velvet.59860 99.87 True fake: scaffold gap size wrong estimation (local) 67438864 67439532 261101 260433 NC_000014.9 velvet.59860 100.0 True local misassembly 67443195 67443858 261785 261122 NC_000014.9 velvet.59860 100.0 True fake: scaffold gap size wrong estimation (local) 67440096 67442959 265755 262833 NC_000014.9 velvet.59860 97.88 True fake: scaffold gap size wrong estimation (local) 67435214 67438555 271447 268107 NC_000014.9 velvet.59860 99.97 True fake: scaffold gap size wrong estimation (local) 67431477 67434939 276056 272499 NC_000014.9 velvet.59860 97.27 True fake: scaffold gap size wrong estimation (local) 67429710 67431106 278496 277100 NC_000014.9 velvet.59860 100.0 True fake: scaffold gap size wrong estimation (local) 67428193 67429167 280689 279715 NC_000014.9 velvet.59860 100.0 True relocation, scaffold gap is present, inconsistency = 86868 67520792 67521946 285446 286600 NC_000014.9 velvet.59860 99.74 True fake: scaffold gap size wrong estimation (local) 67522188 67523071 287097 287980 NC_000014.9 velvet.59860 99.89 True fake: scaffold gap size wrong estimation (local) 67523355 67527416 288886 292968 NC_000014.9 velvet.59860 99.36 True fake: scaffold gap size wrong estimation (extensive) 67535599 67536790 292979 294161 NC_000014.9 velvet.59860 99.16 True relocation, scaffold gap is present, inconsistency = -34522040 33021068 33022408 300479 301819 NC_000014.9 velvet.59860 100.0 True fake: scaffold gap size wrong estimation (local) 33022694 33024124 302621 304051 NC_000014.9 velvet.59860 100.0 True fake: scaffold gap size wrong estimation (local) 33024474 33025575 304416 305517 NC_000014.9 velvet.59860 100.0 True relocation, scaffold gap is present, inconsistency = 34515026 67540658 67542703 305574 307619 NC_000014.9 velvet.59860 100.0 True relocation, scaffold gap is present, inconsistency = -15263 67527451 67531671 307630 311850 NC_000014.9 velvet.59860 99.88 True fake: scaffold gap size wrong estimation (local) 67531940 67533420 312878 314358 NC_000014.9 velvet.59860 100.0 True relocation, scaffold gap is present, inconsistency = -34497901 33054916 33058136 333755 337683 NC_000014.9 velvet.59860 99.72 True relocation, scaffold gap is present, inconsistency = 55162425 88221335 88222141 338457 339263 NC_000014.9 velvet.59860 99.88 True fake: scaffold gap size wrong estimation (local) 88222339 88223921 339505 341087 NC_000014.9 velvet.59860 100.0 True fake: scaffold gap size wrong estimation (local) 88224053 88224673 341537 342157 NC_000014.9 velvet.59860 100.0 True fake: scaffold gap size wrong estimation (local) 88224914 88236208 343016 355106 NC_000014.9 velvet.59860 99.89 True relocation, scaffold gap is present, inconsistency = 25602330 62618849 62619742 358841 357948 NC_000014.9 velvet.59860 99.78 True fake: scaffold gap size wrong estimation (local) 62613027 62615741 362187 359473 NC_000014.9 velvet.59860 99.78 True relocation, scaffold gap is present, inconsistency = 29579755 33025649 33033261 362198 369934 NC_000014.9 velvet.59860 99.51 True fake: scaffold gap size wrong estimation (local) 33033475 33046785 370879 384377 NC_000014.9 velvet.59860 99.77 True fake: scaffold gap size wrong estimation (local) 33046980 33049364 385369 387753 NC_000014.9 velvet.59860 100.0 True fake: scaffold gap size wrong estimation (local) 33049510 33051016 388768 390269 NC_000014.9 velvet.59860 99.2 True fake: scaffold gap size wrong estimation (local) 33051312 33051812 390394 390894 NC_000014.9 velvet.59860 100.0 True relocation, scaffold gap is present, inconsistency = 3587331 36639355 36643017 394768 391106 NC_000014.9 velvet.59860 99.84 True relocation, scaffold gap is present, inconsistency = -25427189 62064336 62066533 396976 394779 NC_000014.9 velvet.59860 99.91 True relocation, scaffold gap is present, inconsistency = 29009698 33052062 33054627 396987 399552 NC_000014.9 velvet.59860 100.0 True relocation, scaffold gap is present, inconsistency = 34502027 67556665 67559097 399563 401995 NC_000014.9 velvet.59860 100.0 True relocation, scaffold gap is present, inconsistency = 2954671 64594371 64601983 409610 402006 NC_000014.9 velvet.59860 99.79 True relocation, scaffold gap is present, inconsistency = 27955038 36638776 36639322 410167 409621 NC_000014.9 velvet.59860 99.45 True local misassembly 36643581 36644301 410899 410178 NC_000014.9 velvet.59860 99.86 True fake: scaffold gap size wrong estimation (local) 36637854 36638654 411706 410910 NC_000014.9 velvet.59860 99.38 True relocation, scaffold gap is present, inconsistency = -27955981 64591618 64593824 413920 411717 NC_000014.9 velvet.59860 99.82 True relocation, scaffold gap is present, inconsistency = -16104 64604963 64607234 416679 414408 NC_000014.9 velvet.59860 99.82 True relocation, scaffold gap is present, inconsistency = 2544459 62059778 62060493 417405 416690 NC_000014.9 velvet.59860 99.86 True relocation, scaffold gap is present, inconsistency = 26170519 88238499 88239201 424892 425623 NC_000014.9 velvet.59860 95.63 True fake: scaffold gap size wrong estimation (local) 88239928 88244415 426386 431609 NC_000014.9 velvet.59860 99.98 True fake: scaffold gap size wrong estimation (local) 88244686 88246112 432518 433944 NC_000014.9 velvet.59860 100.0 True fake: scaffold gap size wrong estimation (extensive) 88260238 88261503 438386 439651 NC_000014.9 velvet.59860 99.92 True fake: scaffold gap size wrong estimation (local) 88261665 88263773 440002 442668 NC_000014.9 velvet.59860 95.37 True relocation, scaffold gap is present, inconsistency = -55171903 33120259 33122896 471057 473694 NC_000014.9 velvet.59860 99.96 True relocation, scaffold gap is present, inconsistency = 55092095 88217129 88217726 476429 475832 NC_000014.9 velvet.59860 100.0 True fake: scaffold gap size wrong estimation (local) 88214217 88216873 479678 477053 NC_000014.9 velvet.59860 98.81 True fake: scaffold gap size wrong estimation (local) 88212424 88213910 482309 480823 NC_000014.9 velvet.59860 100.0 True fake: scaffold gap size wrong estimation (local) 88207439 88211604 487058 482764 NC_000014.9 velvet.59860 99.95 True relocation, scaffold gap is present, inconsistency = -12865 88218588 88220130 488774 487232 NC_000014.9 velvet.59860 100.0 True fake: scaffold gap size wrong estimation (local) 88195027 88197305 509386 507108 NC_000014.9 velvet.59860 99.96 True relocation, scaffold gap is present, inconsistency = -12146 88205813 88207162 510746 509397 NC_000014.9 velvet.59860 99.85 True fake: scaffold gap size wrong estimation (local) 88201636 88205519 515433 511550 NC_000014.9 velvet.59860 99.92 True fake: scaffold gap size wrong estimation (local) 88199194 88201372 518702 516526 NC_000014.9 velvet.59860 99.86 True fake: scaffold gap size wrong estimation (local) 88197705 88198892 520680 519455 NC_000014.9 velvet.59860 99.91 True fake: not a misassembly (possible transposable element) 88181440 88182021 521271 520691 NC_000014.9 velvet.59860 99.83 True fake: not a misassembly (possible transposable element) 88169487 88178605 548112 539012 NC_000014.9 velvet.59860 99.68 True fake: scaffold gap size wrong estimation (local) 88168054 88169390 549809 548473 NC_000014.9 velvet.59860 99.93 True relocation, scaffold gap is present, inconsistency = -13336 88178912 88181379 552287 549820 NC_000014.9 velvet.59860 99.88 True relocation, scaffold gap is present, inconsistency = -12365 88151497 88168034 592185 575530 NC_000014.9 velvet.59860 99.95 True fake: scaffold gap size wrong estimation (extensive) 88145000 88151068 607087 601019 NC_000014.9 velvet.59860 99.82 True fake: scaffold gap size wrong estimation (local) 88142943 88144985 612288 610246 NC_000014.9 velvet.59860 99.95 True fake: not a misassembly (possible transposable element) 43141979 43144042 613721 615784 NC_000014.9 velvet.59860 99.95 True fake: not a misassembly (possible transposable element) 88131770 88142508 627322 615795 NC_000014.9 velvet.59860 99.97 True fake: scaffold gap size wrong estimation (local) 88129397 88131033 630392 628756 NC_000014.9 velvet.59860 100.0 True fake: scaffold gap size wrong estimation (local) 88128269 88129308 632064 631025 NC_000014.9 velvet.59860 100.0 True fake: scaffold gap size wrong estimation (local) 88119675 88120396 639994 639273 NC_000014.9 velvet.59860 100.0 True local misassembly 88120753 88122219 641471 640005 NC_000014.9 velvet.59860 99.93 True fake: scaffold gap size wrong estimation (extensive) 88091702 88092319 662686 662069 NC_000014.9 velvet.59860 99.84 True indel: indel (> 5bp) 88089742 88091650 664716 662764 NC_000014.9 velvet.59860 99.62 True relocation, scaffold gap is present, inconsistency = 34489974 53582608 53585734 681876 678750 NC_000014.9 velvet.59860 100.0 True fake: scaffold gap size wrong estimation (local) 53573632 53577119 687242 683676 NC_000014.9 velvet.59860 99.97 True fake: scaffold gap size wrong estimation (local) 53569094 53573347 692655 688162 NC_000014.9 velvet.59860 99.95 True relocation, scaffold gap is present, inconsistency = 12577041 66152010 66154886 694277 697153 NC_000014.9 velvet.59860 98.92 True fake: scaffold gap size wrong estimation (local) 66155081 66156841 699586 701346 NC_000014.9 velvet.59860 99.32 True relocation, scaffold gap is present, inconsistency = 21959384 88116236 88116997 702118 701357 NC_000014.9 velvet.59860 99.74 True fake: scaffold gap size wrong estimation (local) 88103808 88115962 715308 702951 NC_000014.9 velvet.59860 99.97 True fake: scaffold gap size wrong estimation (local) 88092341 88098757 727623 721207 NC_000014.9 velvet.59860 99.81 True fake: scaffold gap size wrong estimation (local) 88082782 88089032 733883 727634 NC_000014.9 velvet.59860 99.66 True fake: scaffold gap size wrong estimation (local) 88077244 88082278 740223 735188 NC_000014.9 velvet.59860 99.9 True fake: scaffold gap size wrong estimation (local) 88075299 88077038 742895 741154 NC_000014.9 velvet.59860 99.83 True fake: not a misassembly (possible transposable element) 88054890 88055753 762353 763216 NC_000014.9 velvet.59860 98.61 True fake: not a misassembly (possible transposable element) 88046687 88051624 771823 766883 NC_000014.9 velvet.59860 99.49 True relocation, scaffold gap is present, inconsistency = 34506165 53530351 53540511 782041 771834 NC_000014.9 velvet.59860 99.87 True fake: scaffold gap size wrong estimation (local) 53522736 53530222 790383 782897 NC_000014.9 velvet.59860 99.99 True fake: scaffold gap size wrong estimation (local) 53511388 53522573 803369 791262 NC_000014.9 velvet.59860 99.98 True fake: scaffold gap size wrong estimation (extensive) 53500960 53502805 805225 803380 NC_000014.9 velvet.59860 100.0 True inversion, scaffold gap is present 53489794 53500752 805236 817531 NC_000014.9 velvet.59860 99.99 True inversion, scaffold gap is present 53502880 53511100 825904 817542 NC_000014.9 velvet.59860 99.85 True relocation, scaffold gap is present, inconsistency = 17945484 35554620 35557090 828680 826210 NC_000014.9 velvet.59860 100.0 True fake: scaffold gap size wrong estimation (local) 35545024 35554331 839248 829784 NC_000014.9 velvet.59860 98.13 True fake: scaffold gap size wrong estimation (local) 35543915 35544801 840666 839780 NC_000014.9 velvet.59860 100.0 True fake: scaffold gap size wrong estimation (local) 35541315 35543665 843899 841549 NC_000014.9 velvet.59860 100.0 True relocation, scaffold gap is present, inconsistency = 18067056 53610732 53612467 843910 845645 NC_000014.9 velvet.59860 99.94 True fake: scaffold gap size wrong estimation (local) 53612722 53617589 846609 852179 NC_000014.9 velvet.59860 98.25 True fake: scaffold gap size wrong estimation (local) 53645683 53653937 875741 883995 NC_000014.9 velvet.59860 99.9 True fake: scaffold gap size wrong estimation (local) 53654219 53658150 885078 889009 NC_000014.9 velvet.59860 99.85 True CONTIG velvet.59860 889012 misassembled 98525230 98527715 108 2593 NC_000014.9 velvet.59887 100.0 True fake: not a misassembly (possible transposable element) 98519311 98524914 8487 2604 NC_000014.9 velvet.59887 99.93 True fake: not a misassembly (possible transposable element) 98528575 98538453 10266 20460 NC_000014.9 velvet.59887 97.83 True fake: not a misassembly (possible transposable element) 98516110 98519293 23745 20562 NC_000014.9 velvet.59887 99.94 True fake: not a misassembly (possible transposable element) 98538857 98543931 23756 29500 NC_000014.9 velvet.59887 98.22 True fake: scaffold gap size wrong estimation (local) 98544158 98553180 30134 39652 NC_000014.9 velvet.59887 98.95 True relocation, scaffold gap is present, inconsistency = 27713 98501128 98515891 54999 40206 NC_000014.9 velvet.59887 99.76 True relocation, scaffold gap is present, inconsistency = 37300 98553202 98557099 55010 58915 NC_000014.9 velvet.59887 99.8 True fake: scaffold gap size wrong estimation (local) 98557229 98559490 59531 61777 NC_000014.9 velvet.59887 99.12 True fake: not a misassembly (possible transposable element) 98498848 98500994 63934 61788 NC_000014.9 velvet.59887 99.95 True fake: not a misassembly (possible transposable element) 98559600 98560591 63945 64936 NC_000014.9 velvet.59887 99.8 True relocation, scaffold gap is present, inconsistency = 60797 98497062 98498792 66670 64947 NC_000014.9 velvet.59887 99.48 True fake: scaffold gap size wrong estimation (local) 98482665 98496847 81847 67633 NC_000014.9 velvet.59887 99.59 True fake: scaffold gap size wrong estimation (local) 98480901 98482415 84308 82794 NC_000014.9 velvet.59887 100.0 True relocation, scaffold gap is present, inconsistency = 35283791 63193438 63194004 87414 87980 NC_000014.9 velvet.59887 100.0 True relocation, scaffold gap is present, inconsistency = 35265077 98461436 98464807 93706 90335 NC_000014.9 velvet.59887 99.64 True relocation, scaffold gap is present, inconsistency = -9083 98466287 98470508 97877 93717 NC_000014.9 velvet.59887 98.15 True fake: scaffold gap size wrong estimation (local) 98465447 98466009 99170 98608 NC_000014.9 velvet.59887 99.82 True fake: scaffold gap size wrong estimation (local) 98460367 98461365 100180 99181 NC_000014.9 velvet.59887 99.8 True fake: scaffold gap size wrong estimation (local) 98452500 98460099 108821 101137 NC_000014.9 velvet.59887 98.37 True fake: scaffold gap size wrong estimation (local) 98451171 98452221 110897 109847 NC_000014.9 velvet.59887 98.19 True CONTIG velvet.59887 111800 misassembled 100221107 100225762 1230 5876 NC_000014.9 velvet.59931 99.63 True fake: scaffold gap size wrong estimation (local) 100226480 100227761 6868 8425 NC_000014.9 velvet.59931 100.0 True fake: scaffold gap size wrong estimation (local) 100228005 100231218 9259 12589 NC_000014.9 velvet.59931 100.0 True fake: scaffold gap size wrong estimation (local) 100231396 100232072 13468 14144 NC_000014.9 velvet.59931 100.0 True fake: scaffold gap size wrong estimation (local) 100234224 100235602 16984 18325 NC_000014.9 velvet.59931 97.3 True fake: scaffold gap size wrong estimation (local) 100236642 100238367 20351 22076 NC_000014.9 velvet.59931 100.0 True fake: scaffold gap size wrong estimation (local) 100259534 100260099 49090 49655 NC_000014.9 velvet.59931 100.0 True fake: scaffold gap size wrong estimation (local) 100266236 100267542 50960 52266 NC_000014.9 velvet.59931 100.0 True fake: scaffold gap size wrong estimation (local) 100267827 100270007 53402 55582 NC_000014.9 velvet.59931 100.0 True fake: scaffold gap size wrong estimation (local) 100271280 100272094 57711 58525 NC_000014.9 velvet.59931 100.0 True fake: scaffold gap size wrong estimation (local) 100272328 100272921 58614 59207 NC_000014.9 velvet.59931 100.0 True relocation, scaffold gap is present, inconsistency = -23260 100250076 100250808 59622 60354 NC_000014.9 velvet.59931 100.0 True fake: scaffold gap size wrong estimation (local) 100251914 100252823 62458 63367 NC_000014.9 velvet.59931 98.9 True indel: indel (<= 5bp) 100252827 100253452 63368 63993 NC_000014.9 velvet.59931 99.2 True fake: scaffold gap size wrong estimation (local) 100285361 100288118 94715 97580 NC_000014.9 velvet.59931 99.78 True fake: scaffold gap size wrong estimation (local) 100288412 100289586 98053 99227 NC_000014.9 velvet.59931 99.91 True fake: scaffold gap size wrong estimation (local) 100289866 100293863 100277 104274 NC_000014.9 velvet.59931 99.95 True fake: scaffold gap size wrong estimation (local) 100293945 100296664 105224 107935 NC_000014.9 velvet.59931 99.56 True fake: scaffold gap size wrong estimation (local) 100296889 100300015 108923 112098 NC_000014.9 velvet.59931 99.87 True relocation, scaffold gap is present, inconsistency = -22617127 77706133 77711646 135343 140904 NC_000014.9 velvet.59931 99.87 True relocation, scaffold gap is present, inconsistency = 22625442 100341186 100342884 145002 146703 NC_000014.9 velvet.59931 99.29 True fake: scaffold gap size wrong estimation (local) 100343167 100343760 148345 148938 NC_000014.9 velvet.59931 100.0 True fake: scaffold gap size wrong estimation (local) 100345680 100347613 151620 153552 NC_000014.9 velvet.59931 99.59 True fake: scaffold gap size wrong estimation (local) 100347885 100350183 154689 156984 NC_000014.9 velvet.59931 99.78 True fake: scaffold gap size wrong estimation (local) 100350426 100351398 157851 158823 NC_000014.9 velvet.59931 100.0 True relocation, scaffold gap is present, inconsistency = -22685913 77665755 77666989 159093 160327 NC_000014.9 velvet.59931 99.76 True fake: scaffold gap size wrong estimation (local) 77668071 77668696 161636 162260 NC_000014.9 velvet.59931 99.2 True local misassembly 77667166 77667781 162271 162884 NC_000014.9 velvet.59931 99.68 True fake: scaffold gap size wrong estimation (local) 77669919 77670656 165527 166264 NC_000014.9 velvet.59931 99.86 True fake: scaffold gap size wrong estimation (local) 77671571 77672107 167426 167962 NC_000014.9 velvet.59931 99.63 True fake: scaffold gap size wrong estimation (local) 77672356 77674633 168815 171092 NC_000014.9 velvet.59931 99.87 True fake: scaffold gap size wrong estimation (local) 77675464 77676011 172684 173231 NC_000014.9 velvet.59931 99.82 True fake: scaffold gap size wrong estimation (local) 77676209 77677056 173455 174302 NC_000014.9 velvet.59931 98.7 True fake: scaffold gap size wrong estimation (local) 77695194 77695841 186688 187334 NC_000014.9 velvet.59931 99.85 True fake: scaffold gap size wrong estimation (local) 77696410 77697718 188517 189825 NC_000014.9 velvet.59931 99.69 True fake: scaffold gap size wrong estimation (local) 77697996 77698796 190494 191294 NC_000014.9 velvet.59931 100.0 True fake: scaffold gap size wrong estimation (local) 77699067 77699799 191902 192634 NC_000014.9 velvet.59931 99.86 True fake: scaffold gap size wrong estimation (local) 77700109 77702043 193376 195310 NC_000014.9 velvet.59931 99.9 True fake: scaffold gap size wrong estimation (local) 77703897 77705161 197816 199080 NC_000014.9 velvet.59931 99.84 True relocation, scaffold gap is present, inconsistency = 14754 77740169 77740847 219334 220012 NC_000014.9 velvet.59931 100.0 True fake: scaffold gap size wrong estimation (extensive) 77748906 77749527 220040 220661 NC_000014.9 velvet.59931 100.0 True fake: scaffold gap size wrong estimation (local) 77749672 77751806 221589 223715 NC_000014.9 velvet.59931 99.53 True relocation, scaffold gap is present, inconsistency = -18998 77733774 77734574 224681 225481 NC_000014.9 velvet.59931 100.0 True local misassembly 77734745 77735362 225482 226099 NC_000014.9 velvet.59931 98.38 True fake: scaffold gap size wrong estimation (local) 77736588 77737747 228481 229640 NC_000014.9 velvet.59931 100.0 True local misassembly 77735585 77736298 229651 230364 NC_000014.9 velvet.59931 100.0 True fake: scaffold gap size wrong estimation (local) 77738299 77739878 232243 233822 NC_000014.9 velvet.59931 100.0 True fake: scaffold gap size wrong estimation (local) 77741210 77742047 235913 236750 NC_000014.9 velvet.59931 99.64 True local misassembly 77742328 77742850 236751 237273 NC_000014.9 velvet.59931 98.09 True fake: scaffold gap size wrong estimation (local) 77744481 77745458 239952 240929 NC_000014.9 velvet.59931 100.0 True local misassembly 77743293 77744070 240940 241717 NC_000014.9 velvet.59931 100.0 True fake: scaffold gap size wrong estimation (local) 77746022 77747006 243736 244720 NC_000014.9 velvet.59931 100.0 True relocation, scaffold gap is present, inconsistency = 22253018 55490916 55491766 246808 245958 NC_000014.9 velvet.59931 100.0 True fake: scaffold gap size wrong estimation (local) 55487900 55489084 250540 249356 NC_000014.9 velvet.59931 99.75 True fake: scaffold gap size wrong estimation (local) 55485969 55486837 253688 252820 NC_000014.9 velvet.59931 100.0 True relocation, scaffold gap is present, inconsistency = 17667510 73159284 73160049 258625 259390 NC_000014.9 velvet.59931 100.0 True fake: scaffold gap size wrong estimation (local) 73160992 73161899 260945 261852 NC_000014.9 velvet.59931 98.9 True relocation, scaffold gap is present, inconsistency = 4600867 77763090 77764888 262176 263974 NC_000014.9 velvet.59931 100.0 True fake: scaffold gap size wrong estimation (local) 77765168 77765700 265129 265661 NC_000014.9 velvet.59931 100.0 True fake: scaffold gap size wrong estimation (local) 77766348 77766973 266412 267037 NC_000014.9 velvet.59931 98.08 True relocation, scaffold gap is present, inconsistency = -11930 77757244 77757919 269238 269913 NC_000014.9 velvet.59931 98.52 True fake: scaffold gap size wrong estimation (local) 77758348 77762069 270706 274428 NC_000014.9 velvet.59931 99.79 True relocation, scaffold gap is present, inconsistency = -11403724 66358356 66359672 274439 275755 NC_000014.9 velvet.59931 100.0 True fake: scaffold gap size wrong estimation (local) 66364222 66369339 275766 280883 NC_000014.9 velvet.59931 100.0 True relocation, scaffold gap is present, inconsistency = 33978129 100372195 100377313 305610 310812 NC_000014.9 velvet.59931 99.78 True fake: scaffold gap size wrong estimation (local) 100377609 100378182 312056 312629 NC_000014.9 velvet.59931 99.65 True relocation, scaffold gap is present, inconsistency = -34006679 66371534 66378342 312660 319468 NC_000014.9 velvet.59931 100.0 True fake: scaffold gap size wrong estimation (local) 66378605 66386836 320507 328738 NC_000014.9 velvet.59931 100.0 True fake: scaffold gap size wrong estimation (local) 66387429 66396584 330084 340037 NC_000014.9 velvet.59931 100.0 True fake: scaffold gap size wrong estimation (local) 66398002 66407642 342108 351748 NC_000014.9 velvet.59931 100.0 True fake: scaffold gap size wrong estimation (local) 66412549 66416115 351759 355325 NC_000014.9 velvet.59931 100.0 True local misassembly 66409319 66412541 355336 358558 NC_000014.9 velvet.59931 100.0 True fake: scaffold gap size wrong estimation (local) 66416376 66417835 358851 360310 NC_000014.9 velvet.59931 99.86 True fake: scaffold gap size wrong estimation (local) 66417885 66428055 360558 370728 NC_000014.9 velvet.59931 99.97 True fake: not a misassembly (possible transposable element) 100390437 100394851 376148 381311 NC_000014.9 velvet.59931 99.98 True fake: not a misassembly (possible transposable element) 66434101 66435215 381322 382436 NC_000014.9 velvet.59931 100.0 True relocation, scaffold gap is present, inconsistency = 32688775 99124001 99130279 388589 382447 NC_000014.9 velvet.59931 97.79 True fake: scaffold gap size wrong estimation (local) 99096865 99097545 411918 411238 NC_000014.9 velvet.59931 99.56 True fake: not a misassembly (possible transposable element) 66460507 66461207 411929 412629 NC_000014.9 velvet.59931 100.0 True fake: not a misassembly (possible transposable element) 99097721 99102079 416998 412640 NC_000014.9 velvet.59931 99.63 True relocation, scaffold gap is present, inconsistency = 32637488 66457944 66460222 417009 419287 NC_000014.9 velvet.59931 100.0 True relocation, scaffold gap is present, inconsistency = 18765875 85226108 85228745 421934 419298 NC_000014.9 velvet.59931 99.81 True relocation, scaffold gap is present, inconsistency = -13870480 99090528 99096577 427997 421945 NC_000014.9 velvet.59931 99.87 True relocation, scaffold gap is present, inconsistency = 32619694 66469769 66470823 428008 429062 NC_000014.9 velvet.59931 100.0 True CONTIG velvet.59931 429062 misassembled 70557781 70559289 67 1575 NC_000014.9 velvet.59932 100.0 True relocation, scaffold gap is present, inconsistency = -4980625 65578675 65584003 1586 7256 NC_000014.9 velvet.59932 100.0 True fake: scaffold gap size wrong estimation (local) 65584457 65585483 8188 9254 NC_000014.9 velvet.59932 100.0 True fake: scaffold gap size wrong estimation (local) 65587219 65589460 11579 13820 NC_000014.9 velvet.59932 100.0 True fake: scaffold gap size wrong estimation (local) 65589744 65593591 14936 18854 NC_000014.9 velvet.59932 100.0 True fake: scaffold gap size wrong estimation (local) 65594011 65595626 20032 21647 NC_000014.9 velvet.59932 100.0 True fake: scaffold gap size wrong estimation (local) 65595905 65597374 22591 24060 NC_000014.9 velvet.59932 99.93 True relocation, scaffold gap is present, inconsistency = 24010 65558328 65570982 38269 24973 NC_000014.9 velvet.59932 99.99 True fake: scaffold gap size wrong estimation (local) 65550057 65557319 48146 40174 NC_000014.9 velvet.59932 99.99 True fake: scaffold gap size wrong estimation (local) 65543055 65549877 55982 49095 NC_000014.9 velvet.59932 100.0 True fake: scaffold gap size wrong estimation (local) 65538918 65542789 60903 57032 NC_000014.9 velvet.59932 100.0 True fake: scaffold gap size wrong estimation (local) 65537660 65538636 63040 62064 NC_000014.9 velvet.59932 100.0 True fake: scaffold gap size wrong estimation (local) 65536354 65537414 64396 63295 NC_000014.9 velvet.59932 99.51 True fake: scaffold gap size wrong estimation (local) 65535370 65535887 66087 65570 NC_000014.9 velvet.59932 100.0 True fake: scaffold gap size wrong estimation (extensive) 65514789 65519815 78348 73270 NC_000014.9 velvet.59932 99.96 True fake: scaffold gap size wrong estimation (local) 65512908 65514674 81048 79282 NC_000014.9 velvet.59932 100.0 True fake: scaffold gap size wrong estimation (local) 65508851 65511643 85008 82214 NC_000014.9 velvet.59932 99.89 True relocation, scaffold gap is present, inconsistency = -26181 65533090 65534044 86950 85996 NC_000014.9 velvet.59932 98.53 True fake: scaffold gap size wrong estimation (local) 65529505 65531822 90388 88071 NC_000014.9 velvet.59932 99.96 True fake: scaffold gap size wrong estimation (local) 65528658 65529239 92051 91470 NC_000014.9 velvet.59932 100.0 True fake: scaffold gap size wrong estimation (local) 65505582 65506754 110687 109515 NC_000014.9 velvet.59932 99.91 True fake: scaffold gap size wrong estimation (local) 65502496 65504654 114164 112006 NC_000014.9 velvet.59932 100.0 True fake: scaffold gap size wrong estimation (local) 65496692 65501897 120892 115537 NC_000014.9 velvet.59932 99.44 True fake: scaffold gap size wrong estimation (local) 65487954 65496590 130720 121525 NC_000014.9 velvet.59932 99.59 True fake: scaffold gap size wrong estimation (local) 65468391 65469502 149076 147965 NC_000014.9 velvet.59932 100.0 True fake: scaffold gap size wrong estimation (extensive) 65458184 65458934 150643 149840 NC_000014.9 velvet.59932 100.0 True fake: scaffold gap size wrong estimation (local) 65456873 65457484 151265 150654 NC_000014.9 velvet.59932 100.0 True relocation, scaffold gap is present, inconsistency = -10523 65466749 65467294 151912 151367 NC_000014.9 velvet.59932 100.0 True fake: scaffold gap size wrong estimation (local) 65453147 65456601 159893 156439 NC_000014.9 velvet.59932 100.0 True relocation, scaffold gap is present, inconsistency = 10739 65440446 65441476 161855 160825 NC_000014.9 velvet.59932 100.0 True fake: scaffold gap size wrong estimation (local) 65436630 65439886 166518 163262 NC_000014.9 velvet.59932 100.0 True relocation, scaffold gap is present, inconsistency = -9768 65443569 65444922 169379 167994 NC_000014.9 velvet.59932 97.62 True fake: scaffold gap size wrong estimation (local) 65432395 65436181 176847 172964 NC_000014.9 velvet.59932 99.97 True fake: scaffold gap size wrong estimation (local) 65431436 65432376 179421 178422 NC_000014.9 velvet.59932 99.24 True fake: scaffold gap size wrong estimation (local) 65427133 65430979 184422 179675 NC_000014.9 velvet.59932 99.95 True fake: scaffold gap size wrong estimation (local) 65425978 65426858 185468 184594 NC_000014.9 velvet.59932 99.31 True fake: scaffold gap size wrong estimation (local) 65423611 65424520 188832 187923 NC_000014.9 velvet.59932 99.89 True fake: scaffold gap size wrong estimation (local) 65421094 65421728 192168 191535 NC_000014.9 velvet.59932 99.84 True fake: scaffold gap size wrong estimation (local) 65417186 65418942 196572 194816 NC_000014.9 velvet.59932 100.0 True fake: not a misassembly (possible transposable element) 65402638 65403722 197733 196649 NC_000014.9 velvet.59932 100.0 True fake: not a misassembly (possible transposable element) 65411852 65416755 202728 197744 NC_000014.9 velvet.59932 99.41 True fake: scaffold gap size wrong estimation (extensive) 65400841 65401610 205001 204232 NC_000014.9 velvet.59932 100.0 True fake: scaffold gap size wrong estimation (local) 65399260 65400602 206539 205197 NC_000014.9 velvet.59932 100.0 True fake: not a misassembly (possible transposable element) 65410578 65411825 207797 206550 NC_000014.9 velvet.59932 100.0 True fake: not a misassembly (possible transposable element) 65396605 65398216 210182 208571 NC_000014.9 velvet.59932 99.81 True relocation, scaffold gap is present, inconsistency = -16366 65406803 65410562 216439 212591 NC_000014.9 velvet.59932 97.69 True fake: scaffold gap size wrong estimation (local) 65404739 65406548 219267 217458 NC_000014.9 velvet.59932 100.0 True fake: scaffold gap size wrong estimation (local) 65379523 65380117 243552 242958 NC_000014.9 velvet.59932 99.83 True fake: not a misassembly (possible transposable element) 78792264 78794122 246167 244309 NC_000014.9 velvet.59932 99.84 True fake: not a misassembly (possible transposable element) 65374865 65375513 246826 246178 NC_000014.9 velvet.59932 100.0 True relocation, scaffold gap is present, inconsistency = 33688089 31683633 31686765 249970 246837 NC_000014.9 velvet.59932 99.9 True relocation, scaffold gap is present, inconsistency = -47117413 78799863 78801035 251153 249981 NC_000014.9 velvet.59932 99.91 True relocation, scaffold gap is present, inconsistency = 33684565 45111906 45115287 254545 251164 NC_000014.9 velvet.59932 100.0 True relocation, scaffold gap is present, inconsistency = -20289256 65370479 65372443 285228 283264 NC_000014.9 velvet.59932 99.95 True relocation, scaffold gap is present, inconsistency = 43767337 21600353 21601896 288018 286474 NC_000014.9 velvet.59932 99.87 True fake: scaffold gap size wrong estimation (local) 21599247 21600077 288945 288105 NC_000014.9 velvet.59932 98.81 True fake: not a misassembly (possible transposable element) 65366078 65368040 290919 288957 NC_000014.9 velvet.59932 99.9 True fake: not a misassembly (possible transposable element) 21596873 21597421 291834 291286 NC_000014.9 velvet.59932 99.64 True local misassembly 21598217 21598760 292825 292282 NC_000014.9 velvet.59932 99.82 True fake: scaffold gap size wrong estimation (local) 21563690 21565867 325723 323546 NC_000014.9 velvet.59932 99.95 True CONTIG velvet.59932 325807 misassembled 85724963 85726382 143 1592 NC_000014.9 velvet.59945 97.72 True fake: scaffold gap size wrong estimation (local) 85726806 85727906 3244 4344 NC_000014.9 velvet.59945 99.55 True CONTIG velvet.59945 4344 correct 71050281 71050912 1 632 NC_000014.9 velvet.59988 100.0 True fake: scaffold gap size wrong estimation (local) 71051205 71052228 792 1815 NC_000014.9 velvet.59988 100.0 True fake: scaffold gap size wrong estimation (local) 71052342 71053362 1826 3719 NC_000014.9 velvet.59988 100.0 True fake: scaffold gap size wrong estimation (local) 71053620 71056708 4300 7460 NC_000014.9 velvet.59988 99.9 True fake: scaffold gap size wrong estimation (local) 71084601 71092440 34289 42156 NC_000014.9 velvet.59988 99.27 True fake: scaffold gap size wrong estimation (local) 71116523 71119444 66676 69651 NC_000014.9 velvet.59988 99.93 True fake: scaffold gap size wrong estimation (local) 71119730 71120300 70318 70888 NC_000014.9 velvet.59988 99.82 True fake: scaffold gap size wrong estimation (local) 71120576 71122818 71703 73945 NC_000014.9 velvet.59988 99.96 True relocation, scaffold gap is present, inconsistency = 46539982 24542632 24543164 111912 111375 NC_000014.9 velvet.59988 100.0 True fake: not a misassembly (possible transposable element) 86181113 86183470 112930 115213 NC_000014.9 velvet.59988 96.81 True fake: not a misassembly (possible transposable element) 24532052 24540788 123858 115224 NC_000014.9 velvet.59988 98.35 True relocation, scaffold gap is present, inconsistency = -5570331 30092794 30093761 133447 132480 NC_000014.9 velvet.59988 100.0 True fake: not a misassembly (possible transposable element) 30108768 30109943 134633 133458 NC_000014.9 velvet.59988 100.0 True fake: not a misassembly (possible transposable element) 30090734 30092612 136750 134873 NC_000014.9 velvet.59988 99.89 True relocation, scaffold gap is present, inconsistency = 65183192 95276977 95277689 137923 138635 NC_000014.9 velvet.59988 100.0 True fake: scaffold gap size wrong estimation (local) 95277928 95279536 139061 140669 NC_000014.9 velvet.59988 100.0 True fake: scaffold gap size wrong estimation (local) 95281546 95283324 140680 142458 NC_000014.9 velvet.59988 99.66 True local misassembly 95279862 95281535 143801 145474 NC_000014.9 velvet.59988 100.0 True fake: scaffold gap size wrong estimation (local) 95285251 95289309 145485 149543 NC_000014.9 velvet.59988 100.0 True CONTIG velvet.59988 149543 misassembled 56205030 56211268 6909 1 NC_000014.9 velvet.60007 99.77 True fake: scaffold gap size wrong estimation (local) 56201132 56202312 11866 10686 NC_000014.9 velvet.60007 99.49 True relocation, scaffold gap is present, inconsistency = 5986690 50209756 50211016 16552 15292 NC_000014.9 velvet.60007 99.68 True inversion, scaffold gap is present 50208657 50209297 16563 17203 NC_000014.9 velvet.60007 99.69 True relocation, scaffold gap is present, inconsistency = -10661 50200683 50201279 19250 19846 NC_000014.9 velvet.60007 100.0 True inversion, scaffold gap is present 50205873 50207235 22799 21453 NC_000014.9 velvet.60007 98.45 True fake: scaffold gap size wrong estimation (local) 50203597 50204878 26098 24776 NC_000014.9 velvet.60007 99.92 True relocation, scaffold gap is present, inconsistency = 7075 50212446 50213471 26591 27616 NC_000014.9 velvet.60007 99.03 True fake: scaffold gap size wrong estimation (local) 50215137 50215663 30196 30722 NC_000014.9 velvet.60007 100.0 True fake: scaffold gap size wrong estimation (local) 50216735 50217700 30910 31875 NC_000014.9 velvet.60007 99.9 True fake: scaffold gap size wrong estimation (local) 50219143 50219899 34350 35106 NC_000014.9 velvet.60007 99.87 True fake: scaffold gap size wrong estimation (local) 50220437 50221792 38142 39497 NC_000014.9 velvet.60007 100.0 True fake: scaffold gap size wrong estimation (local) 50224916 50227246 44381 46736 NC_000014.9 velvet.60007 99.87 True fake: scaffold gap size wrong estimation (local) 50228262 50231043 48621 51445 NC_000014.9 velvet.60007 99.96 True fake: scaffold gap size wrong estimation (local) 50231759 50233671 52985 54897 NC_000014.9 velvet.60007 99.9 True relocation, scaffold gap is present, inconsistency = 5933435 56167117 56168241 56032 54908 NC_000014.9 velvet.60007 100.0 True fake: scaffold gap size wrong estimation (local) 56165264 56166372 58391 57283 NC_000014.9 velvet.60007 99.1 True local misassembly 56164159 56164710 58943 58392 NC_000014.9 velvet.60007 100.0 True relocation, scaffold gap is present, inconsistency = 5976074 50179029 50180072 66956 67999 NC_000014.9 velvet.60007 100.0 True relocation, scaffold gap is present, inconsistency = 41747 50221830 50223421 68010 69601 NC_000014.9 velvet.60007 100.0 True CONTIG velvet.60007 106050 misassembled 32268456 32273816 2081 7433 NC_000014.9 velvet.60012 98.54 True CONTIG velvet.60012 9493 correct CONTIG velvet.60041 290 unaligned 59878676 59879238 563 1 NC_000014.9 velvet.60073 100.0 True fake: scaffold gap size wrong estimation (local) 59861347 59874678 18464 4221 NC_000014.9 velvet.60073 99.93 True fake: scaffold gap size wrong estimation (local) 59848951 59851572 26910 24289 NC_000014.9 velvet.60073 99.89 True fake: scaffold gap size wrong estimation (local) 59820210 59821601 55251 53815 NC_000014.9 velvet.60073 100.0 True fake: scaffold gap size wrong estimation (local) 59816675 59819305 60139 56880 NC_000014.9 velvet.60073 98.53 True relocation, scaffold gap is present, inconsistency = -21061 59827340 59837725 70535 60150 NC_000014.9 velvet.60073 99.94 True fake: scaffold gap size wrong estimation (local) 59821607 59827059 77981 71619 NC_000014.9 velvet.60073 99.91 True relocation, scaffold gap is present, inconsistency = 88323 59728294 59733273 77992 84644 NC_000014.9 velvet.60073 99.26 True fake: scaffold gap size wrong estimation (local) 59733396 59734260 84779 85643 NC_000014.9 velvet.60073 100.0 True relocation, scaffold gap is present, inconsistency = 72371 59806813 59816652 95664 85825 NC_000014.9 velvet.60073 99.99 True fake: scaffold gap size wrong estimation (local) 59802997 59805989 100354 97362 NC_000014.9 velvet.60073 99.93 True relocation, scaffold gap is present, inconsistency = 46133 59751218 59756853 100365 106000 NC_000014.9 velvet.60073 99.95 True fake: scaffold gap size wrong estimation (local) 59757198 59763547 106893 113772 NC_000014.9 velvet.60073 98.21 True fake: scaffold gap size wrong estimation (local) 59763825 59764336 114889 115400 NC_000014.9 velvet.60073 99.8 True fake: scaffold gap size wrong estimation (local) 59764622 59765974 115558 116910 NC_000014.9 velvet.60073 100.0 True relocation, scaffold gap is present, inconsistency = 29764 59800665 59802975 124147 121837 NC_000014.9 velvet.60073 100.0 True fake: scaffold gap size wrong estimation (local) 59784445 59800358 141600 125231 NC_000014.9 velvet.60073 99.91 True fake: not a misassembly (possible transposable element) 59777881 59783927 141611 147657 NC_000014.9 velvet.60073 99.95 True fake: not a misassembly (possible transposable element) 59771047 59777794 154415 147668 NC_000014.9 velvet.60073 99.9 True fake: scaffold gap size wrong estimation (local) 59766228 59770092 160085 156221 NC_000014.9 velvet.60073 99.84 True fake: scaffold gap size wrong estimation (local) 59747585 59748809 173107 171857 NC_000014.9 velvet.60073 99.75 True fake: scaffold gap size wrong estimation (local) 59739542 59747324 182290 174164 NC_000014.9 velvet.60073 99.96 True fake: not a misassembly (possible transposable element) 62175525 62177213 196013 197628 NC_000014.9 velvet.60073 95.51 True fake: not a misassembly (possible transposable element) 59716994 59720232 202132 198894 NC_000014.9 velvet.60073 99.94 True fake: scaffold gap size wrong estimation (local) 59715828 59716695 204123 203256 NC_000014.9 velvet.60073 100.0 True fake: scaffold gap size wrong estimation (local) 59703245 59709967 210881 204134 NC_000014.9 velvet.60073 99.39 True relocation, scaffold gap is present, inconsistency = -12306 59714249 59715540 212183 210892 NC_000014.9 velvet.60073 99.85 True fake: scaffold gap size wrong estimation (local) 59712917 59713969 213623 212571 NC_000014.9 velvet.60073 99.91 True fake: scaffold gap size wrong estimation (local) 59710298 59712639 216929 214588 NC_000014.9 velvet.60073 100.0 True fake: scaffold gap size wrong estimation (extensive) 59700948 59703239 219231 216940 NC_000014.9 velvet.60073 99.96 True relocation, scaffold gap is present, inconsistency = 2496882 62205233 62217804 224343 237725 NC_000014.9 velvet.60073 99.95 True fake: scaffold gap size wrong estimation (local) 62218608 62219790 238580 239762 NC_000014.9 velvet.60073 99.49 True relocation, scaffold gap is present, inconsistency = 2520823 59675562 59685004 262617 252543 NC_000014.9 velvet.60073 99.14 True fake: scaffold gap size wrong estimation (local) 59648380 59648882 286916 286415 NC_000014.9 velvet.60073 99.8 True relocation, scaffold gap is present, inconsistency = -27167 59672914 59675536 289551 286927 NC_000014.9 velvet.60073 99.77 True fake: not a misassembly (possible transposable element) 59638208 59640303 310141 308046 NC_000014.9 velvet.60073 100.0 True fake: not a misassembly (possible transposable element) 59633067 59636198 326881 323750 NC_000014.9 velvet.60073 100.0 True fake: scaffold gap size wrong estimation (local) 59624722 59632881 336243 327911 NC_000014.9 velvet.60073 99.98 True fake: scaffold gap size wrong estimation (local) 59622267 59624448 340119 337248 NC_000014.9 velvet.60073 99.95 True fake: scaffold gap size wrong estimation (local) 59618361 59622064 344101 340398 NC_000014.9 velvet.60073 99.84 True fake: scaffold gap size wrong estimation (local) 59617241 59618232 346020 345029 NC_000014.9 velvet.60073 99.9 True fake: scaffold gap size wrong estimation (extensive) 59607903 59608998 347126 346031 NC_000014.9 velvet.60073 99.82 True relocation, scaffold gap is present, inconsistency = 63617 59540525 59544275 347137 350937 NC_000014.9 velvet.60073 99.84 True fake: scaffold gap size wrong estimation (local) 59544368 59544888 351674 352194 NC_000014.9 velvet.60073 98.46 True local misassembly 59544902 59545980 352316 353394 NC_000014.9 velvet.60073 98.89 True indel: indel (> 5bp) 59545981 59546754 353464 354237 NC_000014.9 velvet.60073 99.74 True fake: scaffold gap size wrong estimation (local) 59547060 59549534 355485 357959 NC_000014.9 velvet.60073 100.0 True relocation, scaffold gap is present, inconsistency = 42524 59595159 59607853 373924 361060 NC_000014.9 velvet.60073 99.85 True fake: scaffold gap size wrong estimation (local) 59589482 59592098 376552 373935 NC_000014.9 velvet.60073 99.77 True fake: scaffold gap size wrong estimation (local) 59584440 59588900 382340 377880 NC_000014.9 velvet.60073 99.6 True local misassembly 59583220 59584439 384956 383737 NC_000014.9 velvet.60073 99.1 True relocation, scaffold gap is present, inconsistency = -10092 59592104 59593301 386164 384967 NC_000014.9 velvet.60073 99.83 True fake: scaffold gap size wrong estimation (extensive) 59581884 59583038 387329 386175 NC_000014.9 velvet.60073 99.83 True fake: scaffold gap size wrong estimation (local) 59580382 59581560 389008 387830 NC_000014.9 velvet.60073 99.92 True fake: scaffold gap size wrong estimation (local) 59577475 59580108 392624 389991 NC_000014.9 velvet.60073 99.43 True fake: not a misassembly (possible transposable element) 59575809 59577287 393219 394676 NC_000014.9 velvet.60073 98.3 True fake: not a misassembly (possible transposable element) 59573885 59575010 396499 395374 NC_000014.9 velvet.60073 99.73 True relocation, scaffold gap is present, inconsistency = 35508448 95083469 95084822 396510 397847 NC_000014.9 velvet.60073 98.81 True fake: scaffold gap size wrong estimation (local) 95085087 95089212 398650 402823 NC_000014.9 velvet.60073 99.93 True relocation, scaffold gap is present, inconsistency = 35511489 59571013 59573587 405407 402834 NC_000014.9 velvet.60073 95.04 True fake: scaffold gap size wrong estimation (local) 59565667 59570615 411555 406607 NC_000014.9 velvet.60073 99.9 True fake: scaffold gap size wrong estimation (local) 59557633 59565418 421182 412640 NC_000014.9 velvet.60073 99.87 True fake: scaffold gap size wrong estimation (local) 59530351 59531023 445205 444533 NC_000014.9 velvet.60073 99.85 True fake: scaffold gap size wrong estimation (local) 59526556 59530087 449493 445962 NC_000014.9 velvet.60073 99.8 True fake: scaffold gap size wrong estimation (local) 59524003 59526334 452751 450424 NC_000014.9 velvet.60073 99.66 True fake: scaffold gap size wrong estimation (local) 59521501 59523707 455981 453775 NC_000014.9 velvet.60073 99.91 True relocation, scaffold gap is present, inconsistency = -18985 59539752 59540475 456761 455992 NC_000014.9 velvet.60073 99.72 True fake: scaffold gap size wrong estimation (local) 59537920 59539295 458602 457227 NC_000014.9 velvet.60073 99.85 True relocation, scaffold gap is present, inconsistency = 70054 59609360 59613355 458613 462689 NC_000014.9 velvet.60073 99.92 True relocation, scaffold gap is present, inconsistency = 35506660 95123686 95125697 466360 468371 NC_000014.9 velvet.60073 100.0 True fake: scaffold gap size wrong estimation (local) 95125798 95131093 468539 474493 NC_000014.9 velvet.60073 99.94 True fake: scaffold gap size wrong estimation (local) 95131314 95138212 475501 482446 NC_000014.9 velvet.60073 99.27 True relocation, scaffold gap is present, inconsistency = 35609447 59519285 59521490 485028 482823 NC_000014.9 velvet.60073 99.91 True fake: scaffold gap size wrong estimation (local) 59510890 59512797 486949 485039 NC_000014.9 velvet.60073 99.74 True relocation, scaffold gap is present, inconsistency = 32251458 27251176 27256323 490058 495247 NC_000014.9 velvet.60073 99.39 True relocation, scaffold gap is present, inconsistency = 32253403 59509737 59510866 496387 495258 NC_000014.9 velvet.60073 99.47 True fake: scaffold gap size wrong estimation (local) 59508843 59509531 497717 497029 NC_000014.9 velvet.60073 100.0 True fake: scaffold gap size wrong estimation (local) 59507261 59508300 499611 498572 NC_000014.9 velvet.60073 99.81 True relocation, scaffold gap is present, inconsistency = 32243110 27256411 27264140 499622 507371 NC_000014.9 velvet.60073 99.42 True relocation, scaffold gap is present, inconsistency = 67892782 95159890 95166919 510339 518134 NC_000014.9 velvet.60073 99.93 True relocation, inconsistency = 35670754 59487191 59489135 520079 518135 NC_000014.9 velvet.60073 99.85 True relocation, scaffold gap is present, inconsistency = 35688934 95198949 95201038 540959 543048 NC_000014.9 velvet.60073 100.0 True relocation, scaffold gap is present, inconsistency = 35701958 59496188 59496980 543851 543059 NC_000014.9 velvet.60073 99.87 True relocation, scaffold gap is present, inconsistency = 32183822 27298092 27299091 557126 558125 NC_000014.9 velvet.60073 100.0 True fake: scaffold gap size wrong estimation (local) 27299271 27300212 558845 559786 NC_000014.9 velvet.60073 100.0 True relocation, scaffold gap is present, inconsistency = 65309695 92609918 92611302 559797 561181 NC_000014.9 velvet.60073 99.86 True relocation, scaffold gap is present, inconsistency = 33131387 59474830 59478520 564882 561192 NC_000014.9 velvet.60073 99.05 True fake: scaffold gap size wrong estimation (local) 59473000 59474829 566966 565137 NC_000014.9 velvet.60073 99.45 True fake: scaffold gap size wrong estimation (local) 59470958 59472987 571697 569668 NC_000014.9 velvet.60073 99.56 True indel: indel (<= 5bp) 59469564 59470955 573089 571698 NC_000014.9 velvet.60073 100.0 True relocation, scaffold gap is present, inconsistency = 34030431 93502405 93506238 574108 577944 NC_000014.9 velvet.60073 99.82 True relocation, scaffold gap is present, inconsistency = -878301 92637282 92639827 587289 589834 NC_000014.9 velvet.60073 99.88 True fake: scaffold gap size wrong estimation (local) 92640863 92642116 591787 593040 NC_000014.9 velvet.60073 99.92 True relocation, scaffold gap is present, inconsistency = -12964 92629163 92630240 593051 594128 NC_000014.9 velvet.60073 99.91 True relocation, scaffold gap is present, inconsistency = 33182019 59444818 59445654 596454 595618 NC_000014.9 velvet.60073 98.21 True local misassembly 59444021 59444525 596959 596455 NC_000014.9 velvet.60073 99.8 True fake: scaffold gap size wrong estimation (local) 59442442 59444001 599225 597666 NC_000014.9 velvet.60073 99.81 True fake: scaffold gap size wrong estimation (local) 59433943 59442250 608483 600121 NC_000014.9 velvet.60073 99.89 True CONTIG velvet.60073 636002 misassembled 52599691 52603639 4522 1 NC_000014.9 velvet.60113 99.67 True fake: scaffold gap size wrong estimation (local) 52596403 52599420 8366 5348 NC_000014.9 velvet.60113 99.87 True fake: not a misassembly (possible transposable element) 52541267 52546175 32894 37802 NC_000014.9 velvet.60113 99.96 True fake: not a misassembly (possible transposable element) 52568138 52568753 42204 41589 NC_000014.9 velvet.60113 99.51 True fake: scaffold gap size wrong estimation (local) 52567077 52567629 43151 42599 NC_000014.9 velvet.60113 100.0 True fake: scaffold gap size wrong estimation (local) 52564263 52566827 46798 44234 NC_000014.9 velvet.60113 100.0 True fake: scaffold gap size wrong estimation (local) 52560226 52563995 51638 47846 NC_000014.9 velvet.60113 99.14 True relocation, scaffold gap is present, inconsistency = 10550 52546233 52548625 52689 55081 NC_000014.9 velvet.60113 99.92 True fake: scaffold gap size wrong estimation (local) 52548893 52549648 56169 56924 NC_000014.9 velvet.60113 99.74 True fake: scaffold gap size wrong estimation (local) 52549937 52551327 57216 58606 NC_000014.9 velvet.60113 100.0 True fake: scaffold gap size wrong estimation (local) 52553273 52556403 61352 64534 NC_000014.9 velvet.60113 100.0 True fake: scaffold gap size wrong estimation (local) 52556554 52559130 65536 68157 NC_000014.9 velvet.60113 100.0 True fake: scaffold gap size wrong estimation (local) 52559400 52560254 69174 70029 NC_000014.9 velvet.60113 99.77 True fake: scaffold gap size wrong estimation (extensive) 52574629 52576936 75673 77981 NC_000014.9 velvet.60113 99.87 True fake: scaffold gap size wrong estimation (local) 52577968 52578672 79895 80599 NC_000014.9 velvet.60113 100.0 True fake: scaffold gap size wrong estimation (local) 52578976 52580489 83905 85418 NC_000014.9 velvet.60113 100.0 True fake: scaffold gap size wrong estimation (local) 52581565 52582540 87247 88222 NC_000014.9 velvet.60113 100.0 True fake: scaffold gap size wrong estimation (local) 52582811 52585579 89063 91820 NC_000014.9 velvet.60113 99.6 True CONTIG velvet.60113 91883 misassembled 21367168 21368151 984 1 NC_000014.9 velvet.60114 100.0 True fake: scaffold gap size wrong estimation (local) 21365836 21366636 2871 2071 NC_000014.9 velvet.60114 99.75 True fake: not a misassembly (possible transposable element) 61683902 61684985 2934 4017 NC_000014.9 velvet.60114 100.0 True fake: not a misassembly (possible transposable element) 21364238 21365819 6032 4451 NC_000014.9 velvet.60114 99.94 True fake: scaffold gap size wrong estimation (local) 21362894 21363681 8522 7735 NC_000014.9 velvet.60114 99.75 True relocation, scaffold gap is present, inconsistency = 40324622 61711349 61714813 31568 35094 NC_000014.9 velvet.60114 99.97 True fake: scaffold gap size wrong estimation (local) 61715022 61717783 35941 38871 NC_000014.9 velvet.60114 99.6 True fake: scaffold gap size wrong estimation (local) 61718051 61720985 39888 42822 NC_000014.9 velvet.60114 99.9 True fake: scaffold gap size wrong estimation (local) 61721073 61725452 43673 48102 NC_000014.9 velvet.60114 99.43 True fake: not a misassembly (possible transposable element) 78244466 78248309 49358 53201 NC_000014.9 velvet.60114 99.9 True fake: not a misassembly (possible transposable element) 61732096 61733099 53212 54215 NC_000014.9 velvet.60114 99.8 True fake: scaffold gap size wrong estimation (local) 61733337 61735992 54971 57702 NC_000014.9 velvet.60114 97.0 True fake: scaffold gap size wrong estimation (local) 61736280 61737770 58479 59947 NC_000014.9 velvet.60114 98.38 True fake: scaffold gap size wrong estimation (local) 61739051 61740085 59958 60992 NC_000014.9 velvet.60114 100.0 True local misassembly 61738062 61738810 61007 61755 NC_000014.9 velvet.60114 99.87 True fake: scaffold gap size wrong estimation (local) 61740365 61741377 64181 65193 NC_000014.9 velvet.60114 99.9 True fake: scaffold gap size wrong estimation (local) 61741667 61742645 65293 66271 NC_000014.9 velvet.60114 99.69 True fake: scaffold gap size wrong estimation (local) 61743349 61744283 67850 68784 NC_000014.9 velvet.60114 99.89 True fake: scaffold gap size wrong estimation (local) 61745394 61745956 69695 70257 NC_000014.9 velvet.60114 98.22 True fake: scaffold gap size wrong estimation (local) 61746497 61754195 71724 80341 NC_000014.9 velvet.60114 99.83 True fake: scaffold gap size wrong estimation (local) 61754318 61755315 81357 82354 NC_000014.9 velvet.60114 99.9 True local misassembly 61755492 61756191 82355 83054 NC_000014.9 velvet.60114 100.0 True fake: scaffold gap size wrong estimation (local) 61757165 61758756 84322 85913 NC_000014.9 velvet.60114 99.94 True fake: scaffold gap size wrong estimation (local) 61759037 61760354 87100 88417 NC_000014.9 velvet.60114 99.92 True fake: scaffold gap size wrong estimation (local) 61761485 61763003 90338 91856 NC_000014.9 velvet.60114 99.54 True fake: scaffold gap size wrong estimation (local) 61763292 61763980 92335 93021 NC_000014.9 velvet.60114 99.71 True fake: scaffold gap size wrong estimation (local) 61764152 61766177 93887 95893 NC_000014.9 velvet.60114 98.71 True relocation, scaffold gap is present, inconsistency = 25452735 36294285 36302205 113863 105105 NC_000014.9 velvet.60114 99.89 True fake: not a misassembly (possible transposable element) 61775554 61777640 113874 115960 NC_000014.9 velvet.60114 100.0 True fake: not a misassembly (possible transposable element) 36293619 36294266 116604 115961 NC_000014.9 velvet.60114 99.26 True relocation, scaffold gap is present, inconsistency = 25483223 61777723 61779723 116838 118838 NC_000014.9 velvet.60114 100.0 True fake: scaffold gap size wrong estimation (local) 61780007 61781174 119755 120922 NC_000014.9 velvet.60114 100.0 True fake: scaffold gap size wrong estimation (local) 61781471 61782666 121274 122469 NC_000014.9 velvet.60114 100.0 True fake: scaffold gap size wrong estimation (local) 61783833 61785169 123847 125183 NC_000014.9 velvet.60114 100.0 True fake: scaffold gap size wrong estimation (local) 61785956 61788044 126917 128971 NC_000014.9 velvet.60114 98.36 True fake: scaffold gap size wrong estimation (local) 61788389 61788989 129733 130333 NC_000014.9 velvet.60114 98.34 True fake: scaffold gap size wrong estimation (local) 61794708 61795374 132188 132854 NC_000014.9 velvet.60114 100.0 True fake: scaffold gap size wrong estimation (local) 61796350 61797020 133662 134332 NC_000014.9 velvet.60114 100.0 True fake: scaffold gap size wrong estimation (local) 61797457 61799522 135542 137593 NC_000014.9 velvet.60114 99.22 True fake: scaffold gap size wrong estimation (local) 61800689 61805865 139620 144795 NC_000014.9 velvet.60114 99.96 True fake: scaffold gap size wrong estimation (local) 61806078 61807126 145711 146759 NC_000014.9 velvet.60114 99.9 True fake: scaffold gap size wrong estimation (local) 61807455 61808178 147545 148268 NC_000014.9 velvet.60114 99.86 True indel: indel (> 5bp) 61808374 61809014 148397 149037 NC_000014.9 velvet.60114 99.84 True fake: scaffold gap size wrong estimation (local) 61809307 61811493 149951 152115 NC_000014.9 velvet.60114 96.73 True relocation, scaffold gap is present, inconsistency = -22253 61789251 61790375 152126 153250 NC_000014.9 velvet.60114 99.91 True fake: scaffold gap size wrong estimation (local) 61792138 61793412 155770 157044 NC_000014.9 velvet.60114 99.92 True fake: scaffold gap size wrong estimation (local) 61812743 61813659 170368 171284 NC_000014.9 velvet.60114 99.89 True local misassembly 61811606 61812548 171295 172237 NC_000014.9 velvet.60114 100.0 True fake: not a misassembly (possible transposable element) 102894780 102896848 174330 172262 NC_000014.9 velvet.60114 99.9 True fake: not a misassembly (possible transposable element) 61813697 61816752 174341 177394 NC_000014.9 velvet.60114 99.87 True fake: scaffold gap size wrong estimation (local) 61817453 61818416 178654 179617 NC_000014.9 velvet.60114 100.0 True fake: scaffold gap size wrong estimation (local) 61818710 61820493 180232 182015 NC_000014.9 velvet.60114 99.94 True fake: scaffold gap size wrong estimation (local) 61820714 61823069 183024 185379 NC_000014.9 velvet.60114 100.0 True relocation, scaffold gap is present, inconsistency = 40939419 20850075 20851082 216599 215592 NC_000014.9 velvet.60114 99.5 True relocation, scaffold gap is present, inconsistency = -82019463 102866870 102869527 219267 216610 NC_000014.9 velvet.60114 99.92 True relocation, scaffold gap is present, inconsistency = 41033565 61825648 61829672 222900 226924 NC_000014.9 velvet.60114 99.9 True fake: scaffold gap size wrong estimation (local) 61829956 61832482 227987 230513 NC_000014.9 velvet.60114 99.92 True fake: scaffold gap size wrong estimation (local) 61834729 61835264 233876 234411 NC_000014.9 velvet.60114 100.0 True fake: scaffold gap size wrong estimation (local) 61835596 61837254 235061 236719 NC_000014.9 velvet.60114 99.82 True fake: scaffold gap size wrong estimation (local) 61837367 61841826 237631 242234 NC_000014.9 velvet.60114 99.46 True fake: scaffold gap size wrong estimation (local) 61841882 61842441 242366 242924 NC_000014.9 velvet.60114 99.64 True relocation, scaffold gap is present, inconsistency = -19419861 42424192 42425793 244536 246137 NC_000014.9 velvet.60114 100.0 True fake: scaffold gap size wrong estimation (local) 42427891 42430857 248864 251830 NC_000014.9 velvet.60114 99.9 True relocation, scaffold gap is present, inconsistency = 19417559 61848427 61849594 253008 251841 NC_000014.9 velvet.60114 100.0 True relocation, scaffold gap is present, inconsistency = -115693 61946153 61959849 271099 257279 NC_000014.9 velvet.60114 99.47 True relocation, scaffold gap is present, inconsistency = 56567 61888771 61889575 271914 271110 NC_000014.9 velvet.60114 100.0 True relocation, scaffold gap is present, inconsistency = 29709 61853221 61858834 272142 278109 NC_000014.9 velvet.60114 99.98 True fake: scaffold gap size wrong estimation (local) 61859197 61861561 279023 281384 NC_000014.9 velvet.60114 99.83 True fake: scaffold gap size wrong estimation (local) 61861685 61883177 282364 303787 NC_000014.9 velvet.60114 99.61 True fake: scaffold gap size wrong estimation (local) 61884083 61885992 305486 307395 NC_000014.9 velvet.60114 99.95 True fake: scaffold gap size wrong estimation (local) 61887033 61888138 309124 310229 NC_000014.9 velvet.60114 98.92 True relocation, scaffold gap is present, inconsistency = 33853398 28028970 28033624 315844 310240 NC_000014.9 velvet.60114 99.03 True fake: scaffold gap size wrong estimation (local) 28026816 28028760 318717 316773 NC_000014.9 velvet.60114 99.95 True fake: scaffold gap size wrong estimation (local) 28025379 28026533 320617 319463 NC_000014.9 velvet.60114 100.0 True fake: scaffold gap size wrong estimation (local) 28017812 28025104 328803 321422 NC_000014.9 velvet.60114 98.7 True local misassembly 28016618 28017771 330111 328958 NC_000014.9 velvet.60114 99.83 True fake: scaffold gap size wrong estimation (local) 28012097 28016370 335084 330811 NC_000014.9 velvet.60114 99.98 True relocation, scaffold gap is present, inconsistency = 76907 27934204 27935179 335095 336070 NC_000014.9 velvet.60114 100.0 True fake: scaffold gap size wrong estimation (local) 27935351 27939616 337041 341327 NC_000014.9 velvet.60114 99.09 True relocation, scaffold gap is present, inconsistency = 14765304 42704931 42707426 341338 343820 NC_000014.9 velvet.60114 99.44 True fake: scaffold gap size wrong estimation (local) 42708135 42709426 345093 346384 NC_000014.9 velvet.60114 100.0 True relocation, scaffold gap is present, inconsistency = 14717768 27984956 27987128 351795 349623 NC_000014.9 velvet.60114 99.82 True relocation, scaffold gap is present, inconsistency = -26631 28002379 28011576 361003 351806 NC_000014.9 velvet.60114 99.89 True fake: scaffold gap size wrong estimation (local) 28000202 28002253 363969 361917 NC_000014.9 velvet.60114 99.85 True fake: scaffold gap size wrong estimation (local) 27998173 27999925 366723 364971 NC_000014.9 velvet.60114 100.0 True relocation, scaffold gap is present, inconsistency = 14729162 42729098 42738812 366734 376448 NC_000014.9 velvet.60114 99.99 True fake: scaffold gap size wrong estimation (local) 42738952 42742458 377254 380878 NC_000014.9 velvet.60114 99.97 True fake: scaffold gap size wrong estimation (local) 42752620 42754463 391141 392982 NC_000014.9 velvet.60114 99.78 True fake: scaffold gap size wrong estimation (local) 42754645 42755736 393833 394924 NC_000014.9 velvet.60114 99.82 True fake: scaffold gap size wrong estimation (local) 42756019 42758234 395550 397959 NC_000014.9 velvet.60114 99.86 True fake: scaffold gap size wrong estimation (local) 42758557 42762072 399115 402848 NC_000014.9 velvet.60114 99.37 True fake: scaffold gap size wrong estimation (local) 42762324 42764964 403708 406332 NC_000014.9 velvet.60114 98.79 True fake: scaffold gap size wrong estimation (local) 42798844 42799989 433645 434956 NC_000014.9 velvet.60114 99.11 True fake: scaffold gap size wrong estimation (local) 42800264 42804930 435144 440710 NC_000014.9 velvet.60114 99.61 True fake: scaffold gap size wrong estimation (local) 42829006 42830150 462503 463698 NC_000014.9 velvet.60114 99.91 True fake: scaffold gap size wrong estimation (local) 42831235 42833727 465416 467908 NC_000014.9 velvet.60114 99.88 True relocation, scaffold gap is present, inconsistency = -9092 42824842 42826299 468115 469568 NC_000014.9 velvet.60114 99.17 True fake: scaffold gap size wrong estimation (local) 42826565 42828981 470670 473086 NC_000014.9 velvet.60114 99.96 True fake: scaffold gap size wrong estimation (local) 42833729 42838488 473097 477862 NC_000014.9 velvet.60114 99.92 True relocation, scaffold gap is present, inconsistency = 27575101 70413600 70414311 477873 478584 NC_000014.9 velvet.60114 99.86 True fake: scaffold gap size wrong estimation (local) 70415594 70418280 480615 483302 NC_000014.9 velvet.60114 99.7 True relocation, scaffold gap is present, inconsistency = -27579327 42838964 42839771 483313 484120 NC_000014.9 velvet.60114 99.88 True fake: scaffold gap size wrong estimation (local) 42840011 42841068 485104 486161 NC_000014.9 velvet.60114 99.81 True fake: scaffold gap size wrong estimation (local) 42841853 42843114 486906 488167 NC_000014.9 velvet.60114 99.84 True fake: scaffold gap size wrong estimation (local) 42843139 42845913 489010 491738 NC_000014.9 velvet.60114 98.11 True fake: scaffold gap size wrong estimation (local) 42868854 42871487 509035 511668 NC_000014.9 velvet.60114 100.0 True fake: scaffold gap size wrong estimation (local) 42871797 42882653 512805 524253 NC_000014.9 velvet.60114 99.3 True fake: scaffold gap size wrong estimation (local) 42883231 42887822 525522 530147 NC_000014.9 velvet.60114 99.22 True relocation, scaffold gap is present, inconsistency = 23229741 66119740 66121385 532324 533969 NC_000014.9 velvet.60114 100.0 True fake: scaffold gap size wrong estimation (local) 66121623 66124633 534830 537840 NC_000014.9 velvet.60114 100.0 True relocation, scaffold gap is present, inconsistency = 35444 66084604 66086168 539415 537851 NC_000014.9 velvet.60114 100.0 True fake: scaffold gap size wrong estimation (local) 66074410 66084261 551184 540394 NC_000014.9 velvet.60114 99.88 True inversion, scaffold gap is present 66086516 66094990 551772 560390 NC_000014.9 velvet.60114 99.5 True relocation, scaffold gap is present, inconsistency = 29917 66124918 66142541 560401 578102 NC_000014.9 velvet.60114 100.0 True relocation, scaffold gap is present, inconsistency = 41021616 25081615 25085793 599789 595611 NC_000014.9 velvet.60114 99.95 True relocation, scaffold gap is present, inconsistency = 41070843 66156866 66158293 600019 601446 NC_000014.9 velvet.60114 100.0 True fake: scaffold gap size wrong estimation (local) 66166632 66167610 603543 604521 NC_000014.9 velvet.60114 100.0 True fake: scaffold gap size wrong estimation (local) 66167856 66172826 605629 610568 NC_000014.9 velvet.60114 99.38 True relocation, scaffold gap is present, inconsistency = -14264 66158573 66162515 610579 614521 NC_000014.9 velvet.60114 99.97 True fake: scaffold gap size wrong estimation (local) 66162604 66165917 615419 618732 NC_000014.9 velvet.60114 100.0 True fake: scaffold gap size wrong estimation (local) 66190011 66200937 641694 653521 NC_000014.9 velvet.60114 99.87 True CONTIG velvet.60114 655140 misassembled 73083094 73083914 3057 3877 NC_000014.9 velvet.60120 100.0 True fake: scaffold gap size wrong estimation (local) 73087698 73088888 4467 5657 NC_000014.9 velvet.60120 100.0 True fake: scaffold gap size wrong estimation (local) 73090354 73091312 5668 6626 NC_000014.9 velvet.60120 100.0 True local misassembly 73085318 73086214 6637 7500 NC_000014.9 velvet.60120 95.83 True relocation, scaffold gap is present, inconsistency = -1593387 71493241 71494537 7914 9210 NC_000014.9 velvet.60120 100.0 True fake: scaffold gap size wrong estimation (local) 71494941 71495812 10753 11624 NC_000014.9 velvet.60120 99.77 True fake: scaffold gap size wrong estimation (local) 71496227 71496916 11754 12443 NC_000014.9 velvet.60120 99.86 True fake: scaffold gap size wrong estimation (local) 71520117 71520803 37875 38561 NC_000014.9 velvet.60120 99.85 True fake: not a misassembly (possible transposable element) 50162948 50164226 38572 39850 NC_000014.9 velvet.60120 100.0 True fake: not a misassembly (possible transposable element) 71521049 71522559 39861 41371 NC_000014.9 velvet.60120 100.0 True fake: scaffold gap size wrong estimation (local) 71525486 71528417 41382 44387 NC_000014.9 velvet.60120 98.84 True relocation, scaffold gap is present, inconsistency = -21358217 50180267 50181195 54454 55379 NC_000014.9 velvet.60120 99.14 True fake: scaffold gap size wrong estimation (local) 50181479 50182006 56030 56557 NC_000014.9 velvet.60120 100.0 True local misassembly 50182250 50183397 56558 57705 NC_000014.9 velvet.60120 99.13 True fake: scaffold gap size wrong estimation (local) 50183398 50184554 58178 59334 NC_000014.9 velvet.60120 98.01 True fake: scaffold gap size wrong estimation (local) 50184895 50185507 60700 61312 NC_000014.9 velvet.60120 100.0 True local misassembly 50185702 50186635 61313 62246 NC_000014.9 velvet.60120 98.82 True fake: scaffold gap size wrong estimation (local) 50187647 50188248 64376 64977 NC_000014.9 velvet.60120 100.0 True fake: scaffold gap size wrong estimation (local) 50190156 50191946 67709 69499 NC_000014.9 velvet.60120 99.94 True fake: scaffold gap size wrong estimation (local) 50193103 50193765 71638 72300 NC_000014.9 velvet.60120 98.49 True relocation, scaffold gap is present, inconsistency = 22951998 73146214 73147059 72751 73596 NC_000014.9 velvet.60120 100.0 True fake: scaffold gap size wrong estimation (local) 73147283 73148675 74252 75644 NC_000014.9 velvet.60120 100.0 True fake: scaffold gap size wrong estimation (local) 73149334 73150508 77000 78174 NC_000014.9 velvet.60120 98.38 True relocation, scaffold gap is present, inconsistency = -27952 73122567 73123930 78185 79548 NC_000014.9 velvet.60120 99.93 True fake: scaffold gap size wrong estimation (local) 73123976 73126344 79559 81977 NC_000014.9 velvet.60120 97.81 True relocation, scaffold gap is present, inconsistency = 3519022 69604211 69604825 82720 82106 NC_000014.9 velvet.60120 100.0 True relocation, scaffold gap is present, inconsistency = 39668156 29932849 29936044 82731 85926 NC_000014.9 velvet.60120 100.0 True fake: scaffold gap size wrong estimation (local) 29936511 29938327 87055 88871 NC_000014.9 velvet.60120 100.0 True relocation, scaffold gap is present, inconsistency = 63276693 93233598 93234185 108036 107449 NC_000014.9 velvet.60120 100.0 True fake: scaffold gap size wrong estimation (local) 93229731 93233229 112774 109279 NC_000014.9 velvet.60120 99.86 True relocation, scaffold gap is present, inconsistency = 52493668 40733416 40736052 115400 112785 NC_000014.9 velvet.60120 98.97 True relocation, scaffold gap is present, inconsistency = -20846071 61576528 61579476 118344 115411 NC_000014.9 velvet.60120 99.36 True fake: scaffold gap size wrong estimation (local) 61573154 61576348 122491 119298 NC_000014.9 velvet.60120 99.81 True fake: scaffold gap size wrong estimation (local) 61565741 61573016 131369 123425 NC_000014.9 velvet.60120 99.78 True fake: scaffold gap size wrong estimation (local) 61559316 61565473 138654 132374 NC_000014.9 velvet.60120 99.8 True relocation, scaffold gap is present, inconsistency = 2623582 58931065 58934834 139554 143323 NC_000014.9 velvet.60120 99.76 True relocation, scaffold gap is present, inconsistency = -33378 58904199 58908813 146066 150687 NC_000014.9 velvet.60120 99.67 True fake: scaffold gap size wrong estimation (local) 58909024 58911322 151627 153925 NC_000014.9 velvet.60120 99.83 True fake: scaffold gap size wrong estimation (local) 58911421 58916685 154764 160026 NC_000014.9 velvet.60120 99.89 True fake: scaffold gap size wrong estimation (extensive) 58929910 58930591 165355 166023 NC_000014.9 velvet.60120 97.51 True relocation, scaffold gap is present, inconsistency = 11749094 70679816 70682782 166154 169120 NC_000014.9 velvet.60120 100.0 True relocation, scaffold gap is present, inconsistency = 9137800 61536185 61542005 174951 169131 NC_000014.9 velvet.60120 99.83 True indel: indel (<= 5bp) 61533330 61536182 177809 174957 NC_000014.9 velvet.60120 99.75 True fake: scaffold gap size wrong estimation (local) 61529908 61533283 187782 184407 NC_000014.9 velvet.60120 99.56 True relocation, scaffold gap is present, inconsistency = 2560967 58963007 58968909 187814 193801 NC_000014.9 velvet.60120 99.92 True relocation, scaffold gap is present, inconsistency = -13421 58955499 58956163 193812 194476 NC_000014.9 velvet.60120 99.85 True fake: scaffold gap size wrong estimation (local) 58972735 58982142 205775 215234 NC_000014.9 velvet.60120 99.87 True relocation, scaffold gap is present, inconsistency = 9793963 49165554 49177563 228497 216443 NC_000014.9 velvet.60120 99.78 True indel: indel (<= 5bp) 49161968 49165474 232082 228576 NC_000014.9 velvet.60120 99.94 True relocation, scaffold gap is present, inconsistency = -12337912 61498281 61499869 233679 232093 NC_000014.9 velvet.60120 99.43 True fake: not a misassembly (possible transposable element) 70711080 70713961 233690 236571 NC_000014.9 velvet.60120 99.86 True fake: not a misassembly (possible transposable element) 61499889 61500411 237135 236614 NC_000014.9 velvet.60120 99.62 True fake: not a misassembly (possible transposable element) 58991146 58994251 237147 240252 NC_000014.9 velvet.60120 99.87 True fake: not a misassembly (possible transposable element) 61490915 61498014 247362 240263 NC_000014.9 velvet.60120 99.65 True relocation, scaffold gap is present, inconsistency = 27860825 33608043 33628947 270314 248505 NC_000014.9 velvet.60120 100.0 True relocation, scaffold gap is present, inconsistency = 3331523 30269786 30276509 270325 277048 NC_000014.9 velvet.60120 99.99 True relocation, scaffold gap is present, inconsistency = -5528234 24748286 24750575 277059 279348 NC_000014.9 velvet.60120 99.96 True relocation, scaffold gap is present, inconsistency = 8856274 33607408 33607958 280453 279907 NC_000014.9 velvet.60120 99.27 True relocation, scaffold gap is present, inconsistency = -27880415 61486766 61487812 281510 280464 NC_000014.9 velvet.60120 99.62 True fake: not a misassembly (possible transposable element) 64989441 64991355 281641 283555 NC_000014.9 velvet.60120 100.0 True fake: not a misassembly (possible transposable element) 61484921 61485889 285675 284707 NC_000014.9 velvet.60120 98.56 True fake: scaffold gap size wrong estimation (local) 61482268 61483779 289147 287636 NC_000014.9 velvet.60120 99.87 True relocation, scaffold gap is present, inconsistency = 27804660 33668650 33677597 298944 289158 NC_000014.9 velvet.60120 99.92 True fake: scaffold gap size wrong estimation (local) 33665321 33668538 302639 299435 NC_000014.9 velvet.60120 99.5 True relocation, scaffold gap is present, inconsistency = 3447473 30209112 30217837 302650 311375 NC_000014.9 velvet.60120 99.98 True relocation, scaffold gap is present, inconsistency = -14148 30204878 30206216 312564 313902 NC_000014.9 velvet.60120 99.93 True fake: scaffold gap size wrong estimation (local) 30206853 30208247 315594 316988 NC_000014.9 velvet.60120 100.0 True local misassembly 30203538 30204858 317345 318665 NC_000014.9 velvet.60120 100.0 True relocation, scaffold gap is present, inconsistency = 3438332 33645087 33657769 333649 320562 NC_000014.9 velvet.60120 99.87 True fake: scaffold gap size wrong estimation (local) 33643376 33644800 336081 334657 NC_000014.9 velvet.60120 100.0 True relocation, scaffold gap is present, inconsistency = 3398923 30227844 30244441 336093 353530 NC_000014.9 velvet.60120 99.95 True relocation, scaffold gap is present, inconsistency = 45127496 75371948 75372729 354322 353541 NC_000014.9 velvet.60120 99.74 True fake: scaffold gap size wrong estimation (local) 75369430 75371720 357467 355177 NC_000014.9 velvet.60120 99.96 True fake: scaffold gap size wrong estimation (local) 75366588 75369202 361155 358541 NC_000014.9 velvet.60120 100.0 True relocation, scaffold gap is present, inconsistency = -21627290 96976401 96993867 378583 361166 NC_000014.9 velvet.60120 99.43 True relocation, scaffold gap is present, inconsistency = 91227 97085105 97089758 378594 383247 NC_000014.9 velvet.60120 100.0 True fake: scaffold gap size wrong estimation (local) 97093927 97096678 384375 387178 NC_000014.9 velvet.60120 100.0 True relocation, scaffold gap is present, inconsistency = -47153323 49943366 49944159 387189 387978 NC_000014.9 velvet.60120 99.37 True fake: scaffold gap size wrong estimation (local) 49945370 49947531 389953 392114 NC_000014.9 velvet.60120 100.0 True relocation, scaffold gap is present, inconsistency = 25427463 75375005 75376257 393377 392125 NC_000014.9 velvet.60120 99.92 True relocation, scaffold gap is present, inconsistency = -2472299 77845708 77847293 394973 393388 NC_000014.9 velvet.60120 99.87 True relocation, scaffold gap is present, inconsistency = -6764971 84609869 84610668 395783 394984 NC_000014.9 velvet.60120 100.0 True relocation, scaffold gap is present, inconsistency = 11775964 72832209 72833894 395794 397479 NC_000014.9 velvet.60120 99.94 True relocation, scaffold gap is present, inconsistency = 20509410 93343315 93344982 397490 399157 NC_000014.9 velvet.60120 100.0 True relocation, scaffold gap is present, inconsistency = 15492002 77850005 77850633 400465 399837 NC_000014.9 velvet.60120 100.0 True relocation, scaffold gap is present, inconsistency = -14759753 92606405 92607174 403818 403049 NC_000014.9 velvet.60120 98.57 True local misassembly 92605172 92606129 404776 403819 NC_000014.9 velvet.60120 100.0 True relocation, scaffold gap is present, inconsistency = 730495 93336635 93338412 404787 406564 NC_000014.9 velvet.60120 100.0 True relocation, scaffold gap is present, inconsistency = 8019 93327043 93328605 408137 406575 NC_000014.9 velvet.60120 100.0 True relocation, scaffold gap is present, inconsistency = 17993484 75332145 75333219 409551 408477 NC_000014.9 velvet.60120 99.91 True relocation, scaffold gap is present, inconsistency = -18017207 93325388 93326184 433515 432719 NC_000014.9 velvet.60120 98.75 True local misassembly 93324425 93325102 434193 433516 NC_000014.9 velvet.60120 100.0 True relocation, scaffold gap is present, inconsistency = 17993249 75328152 75329838 437217 435531 NC_000014.9 velvet.60120 99.76 True relocation, scaffold gap is present, inconsistency = 21796195 97129526 97132770 440710 443954 NC_000014.9 velvet.60120 99.97 True relocation, scaffold gap is present, inconsistency = -1419968 95712813 95717448 443965 448600 NC_000014.9 velvet.60120 100.0 True fake: scaffold gap size wrong estimation (local) 95753747 95755298 478506 480057 NC_000014.9 velvet.60120 100.0 True fake: scaffold gap size wrong estimation (local) 95755442 95756548 480951 482057 NC_000014.9 velvet.60120 100.0 True fake: scaffold gap size wrong estimation (local) 95756818 95758135 482268 483585 NC_000014.9 velvet.60120 100.0 True fake: scaffold gap size wrong estimation (local) 95763908 95766426 483596 486064 NC_000014.9 velvet.60120 97.94 True fake: scaffold gap size wrong estimation (local) 95766713 95769358 487228 489873 NC_000014.9 velvet.60120 99.89 True local misassembly 95763186 95763902 490640 491392 NC_000014.9 velvet.60120 100.0 True fake: scaffold gap size wrong estimation (local) 95783871 95796544 509767 522257 NC_000014.9 velvet.60120 98.52 True fake: scaffold gap size wrong estimation (local) 95796762 95804081 523211 531469 NC_000014.9 velvet.60120 99.9 True fake: scaffold gap size wrong estimation (local) 95804339 95806475 532434 534570 NC_000014.9 velvet.60120 100.0 True fake: scaffold gap size wrong estimation (local) 95811129 95823867 534581 548244 NC_000014.9 velvet.60120 99.09 True fake: scaffold gap size wrong estimation (local) 95824154 95836132 549263 561748 NC_000014.9 velvet.60120 97.78 True fake: scaffold gap size wrong estimation (local) 95837428 95840778 563902 567252 NC_000014.9 velvet.60120 100.0 True fake: scaffold gap size wrong estimation (local) 95841039 95842255 568312 569528 NC_000014.9 velvet.60120 100.0 True fake: scaffold gap size wrong estimation (local) 95842992 95843666 570456 571130 NC_000014.9 velvet.60120 100.0 True fake: scaffold gap size wrong estimation (local) 95845536 95848314 571141 573919 NC_000014.9 velvet.60120 99.96 True fake: scaffold gap size wrong estimation (local) 95854314 95855912 575160 577040 NC_000014.9 velvet.60120 99.87 True relocation, scaffold gap is present, inconsistency = -12728 95843681 95845492 577537 579348 NC_000014.9 velvet.60120 99.94 True fake: scaffold gap size wrong estimation (local) 95848988 95852073 579359 582446 NC_000014.9 velvet.60120 99.97 True fake: scaffold gap size wrong estimation (local) 95852305 95854051 583479 585225 NC_000014.9 velvet.60120 100.0 True fake: scaffold gap size wrong estimation (local) 95855947 95862732 585236 592021 NC_000014.9 velvet.60120 99.96 True fake: scaffold gap size wrong estimation (local) 95862850 95871929 592697 602018 NC_000014.9 velvet.60120 97.2 True fake: scaffold gap size wrong estimation (local) 95872211 95909301 603066 641186 NC_000014.9 velvet.60120 99.88 True fake: scaffold gap size wrong estimation (local) 95909585 95912817 642240 645469 NC_000014.9 velvet.60120 99.63 True fake: scaffold gap size wrong estimation (local) 95914027 95924547 647446 658765 NC_000014.9 velvet.60120 99.82 True fake: scaffold gap size wrong estimation (local) 95924638 95927726 658931 662348 NC_000014.9 velvet.60120 98.11 True relocation, scaffold gap is present, inconsistency = 49061 95993435 95995893 681454 678996 NC_000014.9 velvet.60120 99.47 True fake: scaffold gap size wrong estimation (local) 95992159 95993434 682851 681576 NC_000014.9 velvet.60120 99.76 True fake: scaffold gap size wrong estimation (local) 95989084 95992158 687938 684864 NC_000014.9 velvet.60120 97.89 True fake: scaffold gap size wrong estimation (local) 95986813 95989083 690502 688232 NC_000014.9 velvet.60120 99.43 True relocation, scaffold gap is present, inconsistency = 34021 95943245 95948013 695281 700949 NC_000014.9 velvet.60120 99.85 True fake: scaffold gap size wrong estimation (local) 95968770 95971121 727950 730301 NC_000014.9 velvet.60120 99.83 True fake: scaffold gap size wrong estimation (local) 95971412 95973303 731471 733358 NC_000014.9 velvet.60120 99.31 True CONTIG velvet.60120 766562 misassembled 77230203 77232323 1 2120 NC_000014.9 velvet.60154 99.62 True fake: scaffold gap size wrong estimation (local) 77232590 77235486 3243 6139 NC_000014.9 velvet.60154 100.0 True fake: scaffold gap size wrong estimation (local) 77236472 77240941 7743 12166 NC_000014.9 velvet.60154 98.86 True fake: scaffold gap size wrong estimation (local) 77241253 77247217 13200 19469 NC_000014.9 velvet.60154 98.62 True fake: scaffold gap size wrong estimation (local) 77247906 77250444 20981 23519 NC_000014.9 velvet.60154 99.92 True fake: scaffold gap size wrong estimation (local) 77250684 77255075 24549 28940 NC_000014.9 velvet.60154 99.91 True fake: scaffold gap size wrong estimation (local) 77259655 77261950 28951 31246 NC_000014.9 velvet.60154 99.83 True fake: scaffold gap size wrong estimation (local) 77262752 77266284 32939 36471 NC_000014.9 velvet.60154 100.0 True relocation, scaffold gap is present, inconsistency = -11002 77255293 77259629 36482 40818 NC_000014.9 velvet.60154 99.95 True fake: scaffold gap size wrong estimation (local) 77266285 77267288 44734 45737 NC_000014.9 velvet.60154 97.41 True fake: scaffold gap size wrong estimation (local) 77267505 77269692 46395 48582 NC_000014.9 velvet.60154 100.0 True fake: scaffold gap size wrong estimation (local) 77269822 77271848 48746 50772 NC_000014.9 velvet.60154 100.0 True fake: scaffold gap size wrong estimation (local) 77272121 77280840 51789 60698 NC_000014.9 velvet.60154 99.76 True fake: scaffold gap size wrong estimation (local) 77281148 77289209 61770 70033 NC_000014.9 velvet.60154 99.9 True fake: scaffold gap size wrong estimation (local) 77289401 77291776 70984 73359 NC_000014.9 velvet.60154 99.87 True fake: scaffold gap size wrong estimation (local) 77294817 77295378 74001 74562 NC_000014.9 velvet.60154 100.0 True local misassembly 77292029 77294445 74573 76968 NC_000014.9 velvet.60154 98.92 True fake: scaffold gap size wrong estimation (local) 77295663 77300677 77733 82747 NC_000014.9 velvet.60154 99.92 True fake: scaffold gap size wrong estimation (local) 77300834 77307878 83568 90599 NC_000014.9 velvet.60154 99.76 True fake: scaffold gap size wrong estimation (local) 77309938 77310894 93214 94170 NC_000014.9 velvet.60154 95.51 True fake: scaffold gap size wrong estimation (local) 77311090 77312412 95297 96619 NC_000014.9 velvet.60154 99.92 True fake: scaffold gap size wrong estimation (local) 77312684 77313709 96945 97970 NC_000014.9 velvet.60154 99.9 True fake: scaffold gap size wrong estimation (local) 77313980 77315756 98950 100726 NC_000014.9 velvet.60154 99.94 True fake: scaffold gap size wrong estimation (local) 77316598 77318753 102357 104512 NC_000014.9 velvet.60154 99.86 True fake: scaffold gap size wrong estimation (local) 77319040 77321628 105578 108166 NC_000014.9 velvet.60154 99.96 True fake: scaffold gap size wrong estimation (local) 77321913 77323320 109340 110747 NC_000014.9 velvet.60154 99.72 True fake: scaffold gap size wrong estimation (local) 77323632 77324172 111051 111591 NC_000014.9 velvet.60154 99.63 True fake: scaffold gap size wrong estimation (local) 77324451 77331906 112824 120278 NC_000014.9 velvet.60154 99.84 True fake: scaffold gap size wrong estimation (local) 77332180 77333012 121173 122011 NC_000014.9 velvet.60154 100.0 True fake: scaffold gap size wrong estimation (local) 77334246 77337419 123732 126905 NC_000014.9 velvet.60154 99.97 True fake: scaffold gap size wrong estimation (local) 77337680 77345029 127769 135709 NC_000014.9 velvet.60154 99.67 True fake: scaffold gap size wrong estimation (local) 77345991 77346784 137543 138336 NC_000014.9 velvet.60154 99.87 True fake: scaffold gap size wrong estimation (local) 77346785 77347525 138373 139113 NC_000014.9 velvet.60154 99.06 True local misassembly 77347693 77348240 139114 139661 NC_000014.9 velvet.60154 98.18 True fake: scaffold gap size wrong estimation (local) 77355489 77357870 141144 143525 NC_000014.9 velvet.60154 99.92 True fake: scaffold gap size wrong estimation (local) 77358597 77359192 145121 145716 NC_000014.9 velvet.60154 99.0 True fake: scaffold gap size wrong estimation (local) 77370964 77372896 156930 158862 NC_000014.9 velvet.60154 99.84 True fake: scaffold gap size wrong estimation (local) 77373106 77379402 159851 166324 NC_000014.9 velvet.60154 99.94 True relocation, scaffold gap is present, inconsistency = -58857503 18554894 18556684 199319 201109 NC_000014.9 velvet.60154 99.94 True fake: scaffold gap size wrong estimation (local) 18557728 18558875 202936 204084 NC_000014.9 velvet.60154 98.96 True fake: scaffold gap size wrong estimation (local) 18559117 18560480 207179 208542 NC_000014.9 velvet.60154 100.0 True fake: scaffold gap size wrong estimation (local) 18561270 18562339 209927 210996 NC_000014.9 velvet.60154 98.6 True local misassembly 18562555 18563342 210997 211784 NC_000014.9 velvet.60154 98.73 True fake: scaffold gap size wrong estimation (local) 18563343 18564690 212568 213915 NC_000014.9 velvet.60154 97.33 True fake: scaffold gap size wrong estimation (local) 18564691 18566089 213957 215355 NC_000014.9 velvet.60154 97.71 True CONTIG velvet.60154 218284 misassembled 91005004 91011232 933 7859 NC_000014.9 velvet.60164 99.92 True fake: scaffold gap size wrong estimation (local) 91011462 91014368 8616 11522 NC_000014.9 velvet.60164 99.97 True relocation, scaffold gap is present, inconsistency = -33214 90981165 90982296 11533 12664 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 90984135 90984954 15294 16113 NC_000014.9 velvet.60164 98.66 True relocation, scaffold gap is present, inconsistency = -66940715 24047433 24047946 19307 19820 NC_000014.9 velvet.60164 99.42 True fake: scaffold gap size wrong estimation (local) 24048059 24049107 22965 24013 NC_000014.9 velvet.60164 99.71 True fake: scaffold gap size wrong estimation (local) 24052147 24063843 28795 40491 NC_000014.9 velvet.60164 99.91 True fake: scaffold gap size wrong estimation (local) 24064124 24066017 41665 43559 NC_000014.9 velvet.60164 99.89 True relocation, scaffold gap is present, inconsistency = 66934995 91001080 91004126 43627 46673 NC_000014.9 velvet.60164 99.93 True fake: scaffold gap size wrong estimation (extensive) 91014533 91016882 48014 50387 NC_000014.9 velvet.60164 98.9 True relocation, scaffold gap is present, inconsistency = -66927735 24089351 24091144 50591 52420 NC_000014.9 velvet.60164 99.49 True fake: scaffold gap size wrong estimation (local) 24091370 24093420 53299 55349 NC_000014.9 velvet.60164 99.95 True relocation, scaffold gap is present, inconsistency = -7196 24086235 24088706 55360 57909 NC_000014.9 velvet.60164 96.82 True relocation, scaffold gap is present, inconsistency = 66928777 91017494 91020560 57920 60989 NC_000014.9 velvet.60164 99.8 True fake: scaffold gap size wrong estimation (local) 91020759 91021439 61935 62615 NC_000014.9 velvet.60164 99.71 True local misassembly 91021708 91022848 62751 63891 NC_000014.9 velvet.60164 99.04 True fake: scaffold gap size wrong estimation (extensive) 91030646 91032796 63902 66052 NC_000014.9 velvet.60164 99.86 True relocation, scaffold gap is present, inconsistency = -66939126 24093681 24096250 66063 68685 NC_000014.9 velvet.60164 99.84 True fake: scaffold gap size wrong estimation (local) 24096537 24097312 69258 70033 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 24097898 24101675 71294 75071 NC_000014.9 velvet.60164 99.95 True relocation, scaffold gap is present, inconsistency = 66930111 91033624 91034134 76909 77419 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 91034574 91035861 77754 79041 NC_000014.9 velvet.60164 99.53 True relocation, scaffold gap is present, inconsistency = -23421 91035985 91040159 102586 106761 NC_000014.9 velvet.60164 99.9 True fake: not a misassembly (possible transposable element) 24122524 24124654 106772 108902 NC_000014.9 velvet.60164 100.0 True fake: not a misassembly (possible transposable element) 91040402 91042253 108913 110764 NC_000014.9 velvet.60164 99.89 True fake: scaffold gap size wrong estimation (extensive) 91068677 91069325 129007 129655 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 91069957 91071080 133080 134203 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 91075107 91075868 140176 140937 NC_000014.9 velvet.60164 99.87 True local misassembly 91076134 91077492 140938 142296 NC_000014.9 velvet.60164 99.26 True fake: scaffold gap size wrong estimation (local) 91078254 91078879 144315 144940 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 91079558 91080411 144951 145804 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 91081233 91081783 147731 148281 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 91081897 91082775 148670 149548 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 91084427 91085207 152012 152789 NC_000014.9 velvet.60164 99.48 True local misassembly 91083552 91084227 152800 153475 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (extensive) 91104367 91105073 166239 166945 NC_000014.9 velvet.60164 99.86 True local misassembly 91105308 91106057 166946 167695 NC_000014.9 velvet.60164 98.53 True fake: scaffold gap size wrong estimation (local) 91106737 91107267 169563 170093 NC_000014.9 velvet.60164 100.0 True local misassembly 91107532 91108511 170094 171073 NC_000014.9 velvet.60164 98.78 True relocation, scaffold gap is present, inconsistency = 11359 91094750 91096162 172496 171084 NC_000014.9 velvet.60164 99.22 True fake: scaffold gap size wrong estimation (local) 91091475 91092832 176481 175124 NC_000014.9 velvet.60164 100.0 True inversion, scaffold gap is present 91096424 91097142 177447 178165 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 91098455 91099305 180661 181511 NC_000014.9 velvet.60164 99.18 True fake: scaffold gap size wrong estimation (local) 91101102 91101885 183508 184291 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 91101962 91102765 185617 186420 NC_000014.9 velvet.60164 100.0 True local misassembly 91103052 91103841 186421 187210 NC_000014.9 velvet.60164 98.73 True fake: not a misassembly (possible transposable element) 92035771 92036982 188662 187452 NC_000014.9 velvet.60164 99.92 True fake: not a misassembly (possible transposable element) 91108832 91110429 188673 190270 NC_000014.9 velvet.60164 99.94 True relocation, scaffold gap is present, inconsistency = 15093 91089853 91091243 194156 192766 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 91087772 91089553 196899 195118 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 91059342 91060154 221019 220207 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 91057111 91059043 223486 221554 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 91054746 91056861 226664 224540 NC_000014.9 velvet.60164 99.86 True fake: scaffold gap size wrong estimation (local) 91052853 91054296 229280 227837 NC_000014.9 velvet.60164 99.93 True fake: scaffold gap size wrong estimation (local) 91045529 91049327 237852 233974 NC_000014.9 velvet.60164 99.71 True fake: scaffold gap size wrong estimation (local) 91042491 91043951 241674 240213 NC_000014.9 velvet.60164 99.86 True relocation, scaffold gap is present, inconsistency = 66915864 24126023 24126616 242257 241685 NC_000014.9 velvet.60164 96.07 True relocation, scaffold gap is present, inconsistency = 67010842 91137680 91138238 242479 243037 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 91139673 91140435 245474 246236 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 91142147 91142707 248828 249388 NC_000014.9 velvet.60164 99.64 True fake: scaffold gap size wrong estimation (local) 91143394 91144335 250121 251062 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 91144552 91147941 252035 255424 NC_000014.9 velvet.60164 99.97 True fake: scaffold gap size wrong estimation (local) 91149286 91149965 257731 258410 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 91151937 91153231 261209 262504 NC_000014.9 velvet.60164 95.66 True fake: scaffold gap size wrong estimation (local) 91164933 91166404 272439 273910 NC_000014.9 velvet.60164 99.93 True fake: scaffold gap size wrong estimation (local) 91167171 91168837 275781 277390 NC_000014.9 velvet.60164 96.44 True fake: scaffold gap size wrong estimation (local) 91169705 91172151 279234 281680 NC_000014.9 velvet.60164 99.92 True fake: scaffold gap size wrong estimation (local) 91172944 91173459 283029 283592 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (extensive) 91180595 91181639 283603 284612 NC_000014.9 velvet.60164 96.65 True inversion, scaffold gap is present 91177116 91178152 288824 287788 NC_000014.9 velvet.60164 99.9 True fake: scaffold gap size wrong estimation (local) 91174574 91176231 292854 291197 NC_000014.9 velvet.60164 100.0 True relocation, scaffold gap is present, inconsistency = 11803 91161871 91162760 292865 293754 NC_000014.9 velvet.60164 100.0 True local misassembly 91156312 91157077 294029 294794 NC_000014.9 velvet.60164 100.0 True local misassembly 91157294 91158846 294795 296347 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 91159298 91161111 297602 299454 NC_000014.9 velvet.60164 99.89 True fake: scaffold gap size wrong estimation (local) 91182219 91182930 319737 320448 NC_000014.9 velvet.60164 100.0 True relocation, scaffold gap is present, inconsistency = 60984 91247294 91247948 323828 324482 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 91248538 91249600 325841 326902 NC_000014.9 velvet.60164 99.91 True fake: scaffold gap size wrong estimation (local) 91249788 91251359 327241 328799 NC_000014.9 velvet.60164 99.1 True relocation, scaffold gap is present, inconsistency = 23600 91224339 91225656 330648 329331 NC_000014.9 velvet.60164 99.85 True relocation, scaffold gap is present, inconsistency = 8836 91237840 91240914 333996 337071 NC_000014.9 velvet.60164 99.35 True fake: scaffold gap size wrong estimation (local) 91241025 91245844 337794 342603 NC_000014.9 velvet.60164 99.77 True fake: scaffold gap size wrong estimation (local) 91246099 91246811 343819 344531 NC_000014.9 velvet.60164 99.86 True fake: scaffold gap size wrong estimation (local) 91253525 91256404 344542 347421 NC_000014.9 velvet.60164 99.97 True local misassembly 91251673 91252342 347432 348101 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 91252629 91253453 348548 349372 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 91279145 91287583 374435 382868 NC_000014.9 velvet.60164 99.88 True fake: scaffold gap size wrong estimation (local) 91318945 91319783 410033 410871 NC_000014.9 velvet.60164 99.88 True fake: scaffold gap size wrong estimation (local) 91320059 91322923 411824 414688 NC_000014.9 velvet.60164 99.97 True fake: scaffold gap size wrong estimation (local) 91323196 91331890 415743 424708 NC_000014.9 velvet.60164 98.77 True fake: scaffold gap size wrong estimation (local) 91332062 91334294 425198 427430 NC_000014.9 velvet.60164 100.0 True relocation, scaffold gap is present, inconsistency = -133295 91219190 91221398 445621 447829 NC_000014.9 velvet.60164 99.91 True local misassembly 91221551 91224364 447830 450643 NC_000014.9 velvet.60164 99.93 True local misassembly 91230433 91235415 450644 455626 NC_000014.9 velvet.60164 99.8 True fake: scaffold gap size wrong estimation (local) 91235755 91236743 456639 457653 NC_000014.9 velvet.60164 96.56 True inversion, scaffold gap is present 91226437 91230200 461519 457664 NC_000014.9 velvet.60164 98.26 True relocation, scaffold gap is present, inconsistency = 59048127 32175984 32177316 462513 463852 NC_000014.9 velvet.60164 99.77 True fake: scaffold gap size wrong estimation (local) 32177528 32179168 464819 466459 NC_000014.9 velvet.60164 99.82 True fake: scaffold gap size wrong estimation (local) 32180025 32185744 467937 474389 NC_000014.9 velvet.60164 97.53 True fake: scaffold gap size wrong estimation (local) 32186007 32186830 475432 476255 NC_000014.9 velvet.60164 100.0 True fake: not a misassembly (possible transposable element) 81455293 81456002 478006 477297 NC_000014.9 velvet.60164 99.72 True fake: not a misassembly (possible transposable element) 32197076 32198542 485151 486617 NC_000014.9 velvet.60164 99.86 True fake: scaffold gap size wrong estimation (local) 32203516 32205251 486628 488363 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 32205526 32210814 489268 494556 NC_000014.9 velvet.60164 99.89 True fake: scaffold gap size wrong estimation (local) 32211099 32211891 495761 496553 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 32212167 32213518 496674 498021 NC_000014.9 velvet.60164 99.7 True fake: not a misassembly (possible transposable element) 81413789 81415504 499747 498032 NC_000014.9 velvet.60164 99.94 True fake: not a misassembly (possible transposable element) 32213810 32214320 499758 500268 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 32215166 32217007 502061 503902 NC_000014.9 velvet.60164 99.95 True local misassembly 32217278 32219980 503903 506605 NC_000014.9 velvet.60164 99.93 True fake: scaffold gap size wrong estimation (local) 32240288 32253445 523812 537037 NC_000014.9 velvet.60164 99.33 True fake: scaffold gap size wrong estimation (local) 32253731 32257026 538050 541390 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 32277669 32279806 561771 563908 NC_000014.9 velvet.60164 99.86 True fake: scaffold gap size wrong estimation (local) 32279930 32280870 567324 568242 NC_000014.9 velvet.60164 97.64 True fake: scaffold gap size wrong estimation (local) 32281057 32282907 568555 570403 NC_000014.9 velvet.60164 99.84 True fake: scaffold gap size wrong estimation (local) 32283023 32284694 571011 572682 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 32284840 32287620 573452 576232 NC_000014.9 velvet.60164 99.93 True relocation, scaffold gap is present, inconsistency = 28709209 61000509 61004471 583874 579912 NC_000014.9 velvet.60164 99.95 True fake: scaffold gap size wrong estimation (local) 60997411 61000356 587764 584819 NC_000014.9 velvet.60164 99.9 True fake: scaffold gap size wrong estimation (local) 60995007 60997153 590909 588763 NC_000014.9 velvet.60164 99.91 True fake: scaffold gap size wrong estimation (local) 60993017 60994271 593620 592367 NC_000014.9 velvet.60164 99.92 True fake: scaffold gap size wrong estimation (local) 60966786 60971609 619594 614771 NC_000014.9 velvet.60164 99.94 True fake: scaffold gap size wrong estimation (local) 60963251 60966134 623920 621037 NC_000014.9 velvet.60164 99.93 True fake: scaffold gap size wrong estimation (local) 60961234 60962991 626527 624770 NC_000014.9 velvet.60164 99.89 True fake: scaffold gap size wrong estimation (local) 60959924 60960985 628462 627401 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 60940598 60941454 650251 649395 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 60929307 60936229 660963 653978 NC_000014.9 velvet.60164 99.81 True fake: scaffold gap size wrong estimation (local) 60920695 60928855 671123 662160 NC_000014.9 velvet.60164 99.88 True fake: scaffold gap size wrong estimation (local) 60918736 60920444 673861 672153 NC_000014.9 velvet.60164 99.94 True fake: scaffold gap size wrong estimation (extensive) 60907783 60908317 676799 676265 NC_000014.9 velvet.60164 99.44 True fake: scaffold gap size wrong estimation (local) 60904137 60907206 681719 678370 NC_000014.9 velvet.60164 99.7 True fake: scaffold gap size wrong estimation (local) 60901020 60903861 685522 682671 NC_000014.9 velvet.60164 99.68 True fake: scaffold gap size wrong estimation (local) 60896760 60900831 690671 686522 NC_000014.9 velvet.60164 97.31 True fake: scaffold gap size wrong estimation (local) 60891717 60896531 696387 691378 NC_000014.9 velvet.60164 99.9 True fake: scaffold gap size wrong estimation (local) 60890227 60891555 698560 697231 NC_000014.9 velvet.60164 99.77 True relocation, scaffold gap is present, inconsistency = -17800 60886599 60887244 719987 719343 NC_000014.9 velvet.60164 99.85 True fake: scaffold gap size wrong estimation (local) 60884494 60885899 723114 721709 NC_000014.9 velvet.60164 100.0 True local misassembly 60885901 60886585 723809 723125 NC_000014.9 velvet.60164 99.85 True fake: scaffold gap size wrong estimation (local) 60882801 60884492 726533 724841 NC_000014.9 velvet.60164 99.7 True fake: scaffold gap size wrong estimation (local) 60873666 60881111 737237 729073 NC_000014.9 velvet.60164 99.89 True fake: scaffold gap size wrong estimation (local) 60871894 60873513 739587 737986 NC_000014.9 velvet.60164 98.76 True fake: scaffold gap size wrong estimation (local) 60869315 60871630 742844 740529 NC_000014.9 velvet.60164 99.91 True fake: scaffold gap size wrong estimation (local) 60860624 60869018 752401 744006 NC_000014.9 velvet.60164 99.9 True fake: scaffold gap size wrong estimation (local) 60858554 60860335 755261 753480 NC_000014.9 velvet.60164 99.94 True fake: scaffold gap size wrong estimation (local) 60856955 60857614 757671 757012 NC_000014.9 velvet.60164 99.85 True fake: scaffold gap size wrong estimation (local) 60855662 60856626 758912 757948 NC_000014.9 velvet.60164 99.69 True relocation, scaffold gap is present, inconsistency = 28515674 32330750 32337595 761305 768291 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 32337770 32343522 769108 775577 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 32343784 32344670 776554 777440 NC_000014.9 velvet.60164 99.89 True fake: scaffold gap size wrong estimation (local) 32344948 32346602 777884 779538 NC_000014.9 velvet.60164 99.7 True fake: scaffold gap size wrong estimation (local) 32346811 32348412 780265 781866 NC_000014.9 velvet.60164 99.5 True fake: scaffold gap size wrong estimation (local) 32348718 32351307 782746 785335 NC_000014.9 velvet.60164 99.88 True fake: scaffold gap size wrong estimation (local) 32351604 32353303 786470 788121 NC_000014.9 velvet.60164 97.02 True relocation, scaffold gap is present, inconsistency = -27036 32326701 32330738 788555 792592 NC_000014.9 velvet.60164 100.0 True relocation, scaffold gap is present, inconsistency = 28516656 60847405 60851604 796838 792603 NC_000014.9 velvet.60164 98.99 True fake: scaffold gap size wrong estimation (local) 60843542 60847121 801548 797966 NC_000014.9 velvet.60164 99.8 True fake: scaffold gap size wrong estimation (local) 60840935 60843283 805142 802797 NC_000014.9 velvet.60164 99.79 True fake: scaffold gap size wrong estimation (local) 60838250 60840683 808645 806212 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (extensive) 60822893 60823574 815378 814697 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 60815461 60822639 823500 816259 NC_000014.9 velvet.60164 99.89 True fake: not a misassembly (possible transposable element) 32363790 32369814 823511 829719 NC_000014.9 velvet.60164 99.87 True fake: not a misassembly (possible transposable element) 60812624 60815203 832309 829730 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 60811565 60812560 833435 832440 NC_000014.9 velvet.60164 99.9 True fake: scaffold gap size wrong estimation (local) 60806707 60811287 838818 834238 NC_000014.9 velvet.60164 99.87 True fake: scaffold gap size wrong estimation (local) 60805217 60806551 840927 839593 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 60803194 60804740 843661 842115 NC_000014.9 velvet.60164 99.29 True local misassembly 60802007 60802923 844578 843662 NC_000014.9 velvet.60164 99.67 True fake: scaffold gap size wrong estimation (local) 60797734 60801846 849779 845673 NC_000014.9 velvet.60164 98.74 True fake: scaffold gap size wrong estimation (local) 60785030 60793111 857956 849790 NC_000014.9 velvet.60164 99.49 True relocation, scaffold gap is present, inconsistency = 24450290 36331571 36334555 858141 861333 NC_000014.9 velvet.60164 99.8 True relocation, scaffold gap is present, inconsistency = 24458826 60793392 60797644 866099 861344 NC_000014.9 velvet.60164 96.44 True relocation, scaffold gap is present, inconsistency = 24444753 36335100 36339665 875073 879638 NC_000014.9 velvet.60164 99.85 True local misassembly 36342901 36348229 879639 884967 NC_000014.9 velvet.60164 99.68 True fake: scaffold gap size wrong estimation (local) 36348461 36352534 885951 890024 NC_000014.9 velvet.60164 99.93 True relocation, scaffold gap is present, inconsistency = 24412780 60765500 60766163 890873 890210 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 60762702 60764979 894600 892322 NC_000014.9 velvet.60164 99.74 True fake: scaffold gap size wrong estimation (local) 60758463 60762532 899804 895575 NC_000014.9 velvet.60164 99.88 True relocation, scaffold gap is present, inconsistency = -13056276 73813790 73814728 900727 899815 NC_000014.9 velvet.60164 97.04 True relocation, scaffold gap is present, inconsistency = 37444810 36364521 36368898 900809 905186 NC_000014.9 velvet.60164 99.93 True relocation, scaffold gap is present, inconsistency = -2457045 33920429 33921047 913762 914380 NC_000014.9 velvet.60164 99.84 True relocation, scaffold gap is present, inconsistency = 20875426 54823302 54825021 942928 941209 NC_000014.9 velvet.60164 99.88 True relocation, scaffold gap is present, inconsistency = -38278280 93098512 93101571 945998 942939 NC_000014.9 velvet.60164 100.0 True relocation, scaffold gap is present, inconsistency = -10229 93107221 93108730 947518 946009 NC_000014.9 velvet.60164 100.0 True relocation, scaffold gap is present, inconsistency = 19334465 73769915 73772745 950359 947529 NC_000014.9 velvet.60164 99.93 True fake: scaffold gap size wrong estimation (local) 73768756 73769586 952358 951528 NC_000014.9 velvet.60164 99.88 True fake: not a misassembly (possible transposable element) 93095618 93097806 955234 953046 NC_000014.9 velvet.60164 99.95 True fake: not a misassembly (possible transposable element) 73764360 73766540 957425 955245 NC_000014.9 velvet.60164 100.0 True relocation, scaffold gap is present, inconsistency = 18943392 54816374 54820889 962019 957504 NC_000014.9 velvet.60164 99.93 True relocation, scaffold gap is present, inconsistency = -36917798 91729196 91734161 966995 962030 NC_000014.9 velvet.60164 99.88 True relocation, scaffold gap is present, inconsistency = 42220506 49506148 49508679 969537 967006 NC_000014.9 velvet.60164 99.92 True fake: scaffold gap size wrong estimation (local) 49504768 49505890 971740 970618 NC_000014.9 velvet.60164 99.91 True fake: scaffold gap size wrong estimation (local) 49499862 49501036 973271 972097 NC_000014.9 velvet.60164 99.83 True relocation, scaffold gap is present, inconsistency = 2388682 47108743 47109728 975708 974723 NC_000014.9 velvet.60164 99.8 True relocation, scaffold gap is present, inconsistency = -7665702 54772828 54774421 977325 975732 NC_000014.9 velvet.60164 99.94 True relocation, scaffold gap is present, inconsistency = -38299193 93066673 93072010 982747 977336 NC_000014.9 velvet.60164 99.98 True fake: scaffold gap size wrong estimation (local) 93064273 93066393 985907 983787 NC_000014.9 velvet.60164 99.95 True fake: scaffold gap size wrong estimation (local) 93062258 93063997 988703 986911 NC_000014.9 velvet.60164 96.82 True fake: scaffold gap size wrong estimation (local) 93059868 93061997 991851 989722 NC_000014.9 velvet.60164 99.95 True fake: scaffold gap size wrong estimation (local) 93053120 93058422 999815 994170 NC_000014.9 velvet.60164 99.92 True fake: scaffold gap size wrong estimation (local) 93051621 93052925 1001897 1000593 NC_000014.9 velvet.60164 99.85 True fake: scaffold gap size wrong estimation (local) 93048903 93051343 1005244 1002804 NC_000014.9 velvet.60164 99.92 True relocation, scaffold gap is present, inconsistency = 19320812 73723391 73728080 1009944 1005255 NC_000014.9 velvet.60164 99.91 True fake: scaffold gap size wrong estimation (extensive) 73689235 73689762 1035536 1035009 NC_000014.9 velvet.60164 99.81 True relocation, scaffold gap is present, inconsistency = -9694 73695806 73697459 1038659 1037006 NC_000014.9 velvet.60164 99.94 True relocation, scaffold gap is present, inconsistency = -36710 73730979 73732505 1040196 1038670 NC_000014.9 velvet.60164 99.93 True relocation, scaffold gap is present, inconsistency = 43328 73684163 73684777 1043070 1043683 NC_000014.9 velvet.60164 99.67 True relocation, scaffold gap is present, inconsistency = 19354012 93038800 93039364 1044258 1043694 NC_000014.9 velvet.60164 100.0 True relocation, scaffold gap is present, inconsistency = 19301374 73736628 73737415 1045056 1044269 NC_000014.9 velvet.60164 99.87 True fake: scaffold gap size wrong estimation (local) 73709917 73710939 1072422 1071364 NC_000014.9 velvet.60164 96.6 True fake: scaffold gap size wrong estimation (local) 73700361 73701921 1077278 1075718 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 73699567 73700072 1078296 1077791 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 73698717 73699305 1079948 1079360 NC_000014.9 velvet.60164 99.83 True relocation, scaffold gap is present, inconsistency = 24023 73644157 73646465 1110485 1108177 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 73642882 73643432 1112678 1112128 NC_000014.9 velvet.60164 98.19 True fake: scaffold gap size wrong estimation (local) 73639702 73640460 1116430 1115672 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 73638583 73639442 1117685 1116777 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 73636689 73637603 1120158 1119244 NC_000014.9 velvet.60164 100.0 True relocation, scaffold gap is present, inconsistency = -16877 73652367 73653555 1121413 1120169 NC_000014.9 velvet.60164 95.34 True fake: scaffold gap size wrong estimation (local) 73647376 73647998 1128748 1128126 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 73612968 73613911 1158696 1157753 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 73606460 73607027 1159512 1158945 NC_000014.9 velvet.60164 99.47 True relocation, scaffold gap is present, inconsistency = 33709 73568769 73569432 1163494 1162831 NC_000014.9 velvet.60164 99.85 True relocation, scaffold gap is present, inconsistency = -46685 73610558 73612027 1168390 1166921 NC_000014.9 velvet.60164 99.93 True fake: scaffold gap size wrong estimation (local) 73609064 73609631 1172922 1172355 NC_000014.9 velvet.60164 98.06 True fake: scaffold gap size wrong estimation (local) 73602202 73603353 1180855 1179704 NC_000014.9 velvet.60164 99.13 True fake: scaffold gap size wrong estimation (local) 73598891 73600469 1185088 1183451 NC_000014.9 velvet.60164 96.34 True relocation, scaffold gap is present, inconsistency = 10485 73571113 73571840 1202381 1201654 NC_000014.9 velvet.60164 99.73 True fake: scaffold gap size wrong estimation (local) 73567560 73568544 1206503 1205519 NC_000014.9 velvet.60164 98.98 True fake: scaffold gap size wrong estimation (local) 73558630 73559138 1220323 1219815 NC_000014.9 velvet.60164 99.8 True relocation, scaffold gap is present, inconsistency = -4537856 78094577 78096414 1222246 1220395 NC_000014.9 velvet.60164 98.81 True relocation, scaffold gap is present, inconsistency = 2199925 75885498 75888679 1228219 1231400 NC_000014.9 velvet.60164 99.87 True fake: scaffold gap size wrong estimation (local) 75888965 75889666 1232221 1232923 NC_000014.9 velvet.60164 99.57 True fake: scaffold gap size wrong estimation (local) 75889860 75890741 1233162 1234043 NC_000014.9 velvet.60164 99.89 True fake: scaffold gap size wrong estimation (local) 75891018 75893563 1234963 1237508 NC_000014.9 velvet.60164 99.88 True fake: scaffold gap size wrong estimation (local) 75894564 75897527 1239353 1242598 NC_000014.9 velvet.60164 99.76 True fake: scaffold gap size wrong estimation (local) 75897774 75903650 1243600 1249539 NC_000014.9 velvet.60164 99.78 True relocation, scaffold gap is present, inconsistency = 10538182 65356266 65359581 1252927 1249550 NC_000014.9 velvet.60164 98.31 True relocation, scaffold gap is present, inconsistency = -8154443 73508755 73509806 1254877 1253830 NC_000014.9 velvet.60164 99.62 True fake: scaffold gap size wrong estimation (local) 73506161 73506795 1258241 1257607 NC_000014.9 velvet.60164 100.0 True relocation, scaffold gap is present, inconsistency = 2397430 75904236 75908851 1258252 1262868 NC_000014.9 velvet.60164 99.85 True fake: scaffold gap size wrong estimation (local) 75909068 75911064 1263818 1265814 NC_000014.9 velvet.60164 99.85 True fake: scaffold gap size wrong estimation (local) 75911335 75913770 1266827 1269303 NC_000014.9 velvet.60164 99.83 True fake: scaffold gap size wrong estimation (local) 75914058 75914638 1270565 1271145 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 75916569 75918957 1273614 1276060 NC_000014.9 velvet.60164 97.43 True fake: scaffold gap size wrong estimation (local) 75919240 75919872 1277365 1277997 NC_000014.9 velvet.60164 99.84 True fake: scaffold gap size wrong estimation (local) 75951341 75953993 1308393 1311153 NC_000014.9 velvet.60164 96.18 True fake: scaffold gap size wrong estimation (local) 75954279 75955678 1311794 1313193 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 75955963 75959557 1314171 1317765 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 75960245 75963904 1319267 1322926 NC_000014.9 velvet.60164 99.86 True relocation, scaffold gap is present, inconsistency = -26488 75937433 75939608 1322943 1325118 NC_000014.9 velvet.60164 99.82 True relocation, scaffold gap is present, inconsistency = 1819275 74117461 74118147 1325815 1325129 NC_000014.9 velvet.60164 98.26 True local misassembly 74121842 74122583 1326554 1325816 NC_000014.9 velvet.60164 99.6 True local misassembly 74116815 74117459 1327200 1326556 NC_000014.9 velvet.60164 95.97 True fake: scaffold gap size wrong estimation (local) 74114191 74116033 1330778 1328936 NC_000014.9 velvet.60164 99.89 True relocation, scaffold gap is present, inconsistency = 42478424 31613940 31615221 1352635 1351324 NC_000014.9 velvet.60164 96.66 True local misassembly 31619684 31620255 1353219 1352646 NC_000014.9 velvet.60164 98.43 True fake: scaffold gap size wrong estimation (local) 31611516 31612379 1358154 1357291 NC_000014.9 velvet.60164 100.0 True relocation, scaffold gap is present, inconsistency = 49076931 80689321 80690150 1358165 1358994 NC_000014.9 velvet.60164 99.88 True fake: not a misassembly (possible transposable element) 40993709 40995889 1361175 1359005 NC_000014.9 velvet.60164 99.54 True fake: not a misassembly (possible transposable element) 80690448 80694083 1361186 1364821 NC_000014.9 velvet.60164 99.92 True fake: scaffold gap size wrong estimation (local) 80694755 80695461 1365906 1366612 NC_000014.9 velvet.60164 99.72 True fake: scaffold gap size wrong estimation (local) 80695745 80708532 1367483 1381041 NC_000014.9 velvet.60164 99.82 True indel: indel (> 5bp) 80708572 80709174 1381146 1381748 NC_000014.9 velvet.60164 99.83 True fake: scaffold gap size wrong estimation (local) 80709441 80710003 1382800 1383362 NC_000014.9 velvet.60164 99.82 True fake: scaffold gap size wrong estimation (local) 80725462 80729058 1396408 1400725 NC_000014.9 velvet.60164 99.75 True local misassembly 80723104 80725035 1400736 1402667 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 80729322 80734594 1402678 1408110 NC_000014.9 velvet.60164 99.87 True fake: scaffold gap size wrong estimation (local) 80734880 80736977 1409214 1411304 NC_000014.9 velvet.60164 99.62 True fake: scaffold gap size wrong estimation (local) 80737892 80745285 1413019 1421342 NC_000014.9 velvet.60164 97.66 True fake: scaffold gap size wrong estimation (local) 80745383 80747564 1421491 1423672 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 80747810 80751646 1424704 1428544 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 80751927 80754479 1429588 1432186 NC_000014.9 velvet.60164 99.92 True fake: scaffold gap size wrong estimation (local) 80754754 80758269 1433133 1436648 NC_000014.9 velvet.60164 99.72 True fake: scaffold gap size wrong estimation (local) 80758556 80764243 1437862 1444273 NC_000014.9 velvet.60164 99.73 True fake: scaffold gap size wrong estimation (local) 80764548 80769247 1445345 1450044 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 80769661 80775865 1451205 1457409 NC_000014.9 velvet.60164 99.92 True fake: scaffold gap size wrong estimation (local) 80776109 80781213 1458413 1463517 NC_000014.9 velvet.60164 99.96 True fake: scaffold gap size wrong estimation (local) 80781484 80786922 1464586 1470215 NC_000014.9 velvet.60164 99.96 True inversion, scaffold gap is present 80810326 80811021 1490600 1489908 NC_000014.9 velvet.60164 98.71 True fake: scaffold gap size wrong estimation (local) 80807075 80810035 1494744 1491784 NC_000014.9 velvet.60164 100.0 True inversion, scaffold gap is present 80811229 80812611 1494755 1496210 NC_000014.9 velvet.60164 97.12 True fake: scaffold gap size wrong estimation (local) 80813265 80814493 1502340 1503568 NC_000014.9 velvet.60164 100.0 True fake: scaffold gap size wrong estimation (local) 80815064 80816972 1504949 1506858 NC_000014.9 velvet.60164 99.68 True fake: scaffold gap size wrong estimation (local) 80817900 80819261 1508538 1509843 NC_000014.9 velvet.60164 95.64 True fake: scaffold gap size wrong estimation (local) 80819552 80821603 1510857 1512908 NC_000014.9 velvet.60164 99.95 True fake: scaffold gap size wrong estimation (local) 80822804 80823354 1515023 1515573 NC_000014.9 velvet.60164 99.64 True CONTIG velvet.60164 1515838 misassembled 66716720 66718446 4408 6133 NC_000014.9 velvet.60179 99.59 True fake: scaffold gap size wrong estimation (local) 66718813 66720745 7263 9171 NC_000014.9 velvet.60179 98.75 True fake: scaffold gap size wrong estimation (local) 66743766 66751430 36575 44457 NC_000014.9 velvet.60179 99.97 True fake: scaffold gap size wrong estimation (local) 66751682 66753774 45474 47608 NC_000014.9 velvet.60179 100.0 True fake: scaffold gap size wrong estimation (local) 66765749 66769548 56606 60405 NC_000014.9 velvet.60179 100.0 True fake: scaffold gap size wrong estimation (local) 66769764 66771625 61222 63104 NC_000014.9 velvet.60179 97.26 True fake: scaffold gap size wrong estimation (local) 66771840 66773368 63626 65332 NC_000014.9 velvet.60179 100.0 True fake: scaffold gap size wrong estimation (local) 66774304 66776890 66976 69562 NC_000014.9 velvet.60179 100.0 True fake: scaffold gap size wrong estimation (local) 66779038 66781237 72386 74585 NC_000014.9 velvet.60179 100.0 True fake: scaffold gap size wrong estimation (local) 66781519 66782570 75414 76465 NC_000014.9 velvet.60179 100.0 True fake: scaffold gap size wrong estimation (local) 66782864 66785114 77268 79518 NC_000014.9 velvet.60179 100.0 True fake: scaffold gap size wrong estimation (local) 66785374 66788196 80537 83359 NC_000014.9 velvet.60179 99.96 True fake: scaffold gap size wrong estimation (local) 66793085 66795020 86818 88753 NC_000014.9 velvet.60179 99.69 True fake: scaffold gap size wrong estimation (local) 66795021 66797021 91287 93287 NC_000014.9 velvet.60179 99.5 True indel: indel (<= 5bp) 66797023 66798057 93288 94322 NC_000014.9 velvet.60179 99.9 True indel: indel (> 5bp) 66798084 66799579 94323 95818 NC_000014.9 velvet.60179 99.33 True indel: indel (<= 5bp) 66799581 66801610 95819 97848 NC_000014.9 velvet.60179 99.95 True local misassembly 66801853 66805127 97903 101177 NC_000014.9 velvet.60179 100.0 True fake: scaffold gap size wrong estimation (local) 66808797 66815664 106053 113098 NC_000014.9 velvet.60179 99.96 True fake: scaffold gap size wrong estimation (local) 66815993 66818502 113344 115857 NC_000014.9 velvet.60179 99.88 True relocation, scaffold gap is present, inconsistency = -12946 66807327 66808548 117628 118849 NC_000014.9 velvet.60179 100.0 True fake: scaffold gap size wrong estimation (local) 66837662 66840033 143713 146084 NC_000014.9 velvet.60179 100.0 True CONTIG velvet.60179 146237 misassembled 39897760 39898308 1 549 NC_000014.9 velvet.60182 100.0 True CONTIG velvet.60182 1170 correct CONTIG velvet.60199 255 unaligned CONTIG velvet.60212 320 unaligned 90122537 90123644 32646 31539 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = 213977 90340655 90341262 35680 36279 NC_000014.9 velvet.60215 98.52 True relocation, scaffold gap is present, inconsistency = -13707002 76637834 76638688 39853 40707 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = -9399 76629300 76632365 40718 43783 NC_000014.9 velvet.60215 99.54 True fake: scaffold gap size wrong estimation (local) 76632650 76633199 44407 44956 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 76636109 76637211 44967 46069 NC_000014.9 velvet.60215 99.37 True relocation, scaffold gap is present, inconsistency = -5487283 71175566 71177158 71707 73294 NC_000014.9 velvet.60215 98.93 True fake: scaffold gap size wrong estimation (local) 71177395 71178362 73814 74781 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = 16685584 87863957 87871058 74792 81893 NC_000014.9 velvet.60215 99.93 True fake: scaffold gap size wrong estimation (local) 87871304 87872261 82934 83891 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 87878791 87890770 85757 98183 NC_000014.9 velvet.60215 99.13 True relocation, scaffold gap is present, inconsistency = -13333107 74559453 74560845 99973 101365 NC_000014.9 velvet.60215 100.0 True relocation, inconsistency = 14167448 88728294 88729589 101366 102661 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = -23665745 65063855 65065540 102672 104357 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = 25134184 90199735 90201923 104368 106556 NC_000014.9 velvet.60215 99.95 True relocation, scaffold gap is present, inconsistency = -2329613 87872671 87874700 106917 108946 NC_000014.9 velvet.60215 98.57 True fake: scaffold gap size wrong estimation (local) 87874701 87875326 110023 110648 NC_000014.9 velvet.60215 98.24 True indel: indel (<= 5bp) 87875327 87877435 110650 112758 NC_000014.9 velvet.60215 99.72 True relocation, scaffold gap is present, inconsistency = -10870785 77006772 77013454 112880 119562 NC_000014.9 velvet.60215 99.96 True relocation, scaffold gap is present, inconsistency = 20821963 97835428 97840660 124804 119573 NC_000014.9 velvet.60215 99.96 True relocation, scaffold gap is present, inconsistency = 2831075 95001708 95004342 124815 127449 NC_000014.9 velvet.60215 99.96 True relocation, scaffold gap is present, inconsistency = -13752227 81252126 81253497 127460 128831 NC_000014.9 velvet.60215 99.85 True relocation, scaffold gap is present, inconsistency = -3450542 77802966 77804965 128842 130841 NC_000014.9 velvet.60215 99.95 True relocation, scaffold gap is present, inconsistency = 2359915 80164891 80166141 130852 132102 NC_000014.9 velvet.60215 99.92 True relocation, scaffold gap is present, inconsistency = 20160536 100326929 100328098 133523 132354 NC_000014.9 velvet.60215 99.83 True relocation, scaffold gap is present, inconsistency = 51518609 48804976 48808041 133802 136867 NC_000014.9 velvet.60215 99.97 True relocation, scaffold gap is present, inconsistency = -23862454 24945598 24949711 136878 140997 NC_000014.9 velvet.60215 99.78 True relocation, scaffold gap is present, inconsistency = 26066624 51016878 51027121 151799 141540 NC_000014.9 velvet.60215 99.76 True relocation, scaffold gap is present, inconsistency = 27158994 23857142 23857873 151810 152541 NC_000014.9 velvet.60215 99.86 True relocation, scaffold gap is present, inconsistency = 57527929 81385813 81387632 152552 154362 NC_000014.9 velvet.60215 99.45 True relocation, scaffold gap is present, inconsistency = 16413547 97801190 97803749 156971 154373 NC_000014.9 velvet.60215 98.35 True relocation, scaffold gap is present, inconsistency = 47961189 49839340 49839990 157632 156982 NC_000014.9 velvet.60215 99.69 True relocation, scaffold gap is present, inconsistency = 15220463 65060902 65063631 158081 160810 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = 6109547 71173189 71175071 160821 162729 NC_000014.9 velvet.60215 97.54 True relocation, scaffold gap is present, inconsistency = 3826066 75001148 75004406 165998 162740 NC_000014.9 velvet.60215 99.94 True relocation, scaffold gap is present, inconsistency = 53832691 21165964 21168446 166009 168491 NC_000014.9 velvet.60215 99.96 True fake: scaffold gap size wrong estimation (local) 21168733 21171909 169599 172775 NC_000014.9 velvet.60215 99.97 True relocation, scaffold gap is present, inconsistency = 43880166 65052086 65054153 172786 174853 NC_000014.9 velvet.60215 99.85 True relocation, scaffold gap is present, inconsistency = 2601132 67655296 67655963 175531 174864 NC_000014.9 velvet.60215 99.85 True fake: scaffold gap size wrong estimation (local) 67653054 67654174 177539 176419 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = 22419 67629155 67630624 177550 179044 NC_000014.9 velvet.60215 98.13 True fake: scaffold gap size wrong estimation (local) 67630884 67631433 179566 180115 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = 17771 67649403 67651489 182400 180314 NC_000014.9 velvet.60215 99.95 True indel: indel (> 5bp) 67648273 67649394 183587 182466 NC_000014.9 velvet.60215 99.02 True local misassembly 67643074 67643580 184094 183588 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 67639926 67642788 187801 184576 NC_000014.9 velvet.60215 99.96 True fake: scaffold gap size wrong estimation (local) 67638371 67639639 189577 188309 NC_000014.9 velvet.60215 100.0 True fake: not a misassembly (possible transposable element) 66179529 66180783 190842 189588 NC_000014.9 velvet.60215 100.0 True fake: not a misassembly (possible transposable element) 67637414 67638303 191732 190843 NC_000014.9 velvet.60215 98.7 True local misassembly 67635788 67637122 193067 191733 NC_000014.9 velvet.60215 99.93 True fake: scaffold gap size wrong estimation (local) 67634547 67635593 195489 194445 NC_000014.9 velvet.60215 99.81 True relocation, scaffold gap is present, inconsistency = 9006881 76642485 76647091 195500 200106 NC_000014.9 velvet.60215 99.93 True fake: scaffold gap size wrong estimation (local) 76647561 76648723 201000 202162 NC_000014.9 velvet.60215 99.91 True fake: scaffold gap size wrong estimation (local) 76648979 76652859 203063 206943 NC_000014.9 velvet.60215 99.2 True local misassembly 76657629 76658904 206944 208219 NC_000014.9 velvet.60215 99.22 True fake: not a misassembly (possible transposable element) 76670682 76672463 208230 210011 NC_000014.9 velvet.60215 99.66 True fake: not a misassembly (possible transposable element) 76659134 76662405 210022 213291 NC_000014.9 velvet.60215 99.94 True fake: scaffold gap size wrong estimation (local) 76662700 76663455 214070 214825 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = 21696 76708645 76709222 238319 238896 NC_000014.9 velvet.60215 99.83 True fake: scaffold gap size wrong estimation (local) 76710268 76711170 241286 242188 NC_000014.9 velvet.60215 99.67 True relocation, scaffold gap is present, inconsistency = -17158 76694599 76700677 242775 248824 NC_000014.9 velvet.60215 99.39 True relocation, scaffold gap is present, inconsistency = 26045318 102746006 102748170 248835 250999 NC_000014.9 velvet.60215 99.77 True fake: scaffold gap size wrong estimation (extensive) 102759203 102761717 252158 254672 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 102761993 102762677 255409 256281 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = -26026175 76736513 76738371 256292 258148 NC_000014.9 velvet.60215 99.19 True fake: scaffold gap size wrong estimation (local) 76739134 76739954 259396 260216 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = 26024142 102764107 102764617 260227 260737 NC_000014.9 velvet.60215 98.24 True fake: scaffold gap size wrong estimation (local) 102766049 102766619 262334 262904 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 102767337 102767882 264369 264914 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 102768177 102769648 265735 267206 NC_000014.9 velvet.60215 99.66 True fake: scaffold gap size wrong estimation (local) 102774408 102775251 270404 271247 NC_000014.9 velvet.60215 100.0 True local misassembly 102770083 102771632 271258 272807 NC_000014.9 velvet.60215 99.74 True fake: scaffold gap size wrong estimation (local) 102773281 102773809 275215 275743 NC_000014.9 velvet.60215 99.81 True relocation, scaffold gap is present, inconsistency = -43804742 58969078 58972430 275754 279106 NC_000014.9 velvet.60215 99.85 True relocation, scaffold gap is present, inconsistency = 2537445 61509886 61521585 279117 291605 NC_000014.9 velvet.60215 99.8 True fake: scaffold gap size wrong estimation (local) 61521677 61528176 292476 298979 NC_000014.9 velvet.60215 99.83 True fake: scaffold gap size wrong estimation (local) 61528475 61529452 300193 301214 NC_000014.9 velvet.60215 99.79 True fake: scaffold gap size wrong estimation (local) 61548717 61553441 315841 320563 NC_000014.9 velvet.60215 99.89 True fake: scaffold gap size wrong estimation (local) 61553839 61559138 321766 327390 NC_000014.9 velvet.60215 99.77 True fake: scaffold gap size wrong estimation (local) 61594639 61595955 357576 358932 NC_000014.9 velvet.60215 99.61 True fake: scaffold gap size wrong estimation (local) 61596246 61600536 359680 363973 NC_000014.9 velvet.60215 99.77 True relocation, scaffold gap is present, inconsistency = 15100151 76700698 76703235 363984 366521 NC_000014.9 velvet.60215 99.8 True fake: scaffold gap size wrong estimation (local) 76703457 76704283 367436 368262 NC_000014.9 velvet.60215 99.76 True relocation, scaffold gap is present, inconsistency = 32737002 43960151 43963506 374552 371211 NC_000014.9 velvet.60215 99.43 True fake: scaffold gap size wrong estimation (local) 43958824 43959966 376758 375616 NC_000014.9 velvet.60215 99.83 True relocation, scaffold gap is present, inconsistency = 32710685 76672728 76675978 378835 382089 NC_000014.9 velvet.60215 99.69 True relocation, scaffold gap is present, inconsistency = 4578043 81254032 81256680 382100 384747 NC_000014.9 velvet.60215 99.96 True relocation, scaffold gap is present, inconsistency = 37298362 43946102 43955659 394316 384758 NC_000014.9 velvet.60215 99.88 True relocation, scaffold gap is present, inconsistency = -50687178 94626960 94633269 400636 394327 NC_000014.9 velvet.60215 99.9 True fake: scaffold gap size wrong estimation (local) 94611970 94626356 416418 402031 NC_000014.9 velvet.60215 99.92 True relocation, scaffold gap is present, inconsistency = 13332525 81274888 81279434 416429 420971 NC_000014.9 velvet.60215 99.8 True fake: not a misassembly (possible transposable element) 81272243 81274730 420982 423469 NC_000014.9 velvet.60215 99.96 True fake: not a misassembly (possible transposable element) 81286138 81291882 423480 429224 NC_000014.9 velvet.60215 99.95 True relocation, scaffold gap is present, inconsistency = -1584358 79707535 79708137 429235 429837 NC_000014.9 velvet.60215 99.83 True fake: not a misassembly (possible transposable element) 77051953 77054384 429848 432279 NC_000014.9 velvet.60215 99.84 True fake: not a misassembly (possible transposable element) 79708529 79711555 433098 436122 NC_000014.9 velvet.60215 99.83 True fake: not a misassembly (possible transposable element) 94589391 94590997 438061 436455 NC_000014.9 velvet.60215 99.88 True fake: not a misassembly (possible transposable element) 79711605 79712683 438072 439150 NC_000014.9 velvet.60215 99.91 True relocation, scaffold gap is present, inconsistency = 12358913 92071607 92072608 439161 440162 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = 1005085 91064626 91066095 442058 440589 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = 14039675 77022259 77024940 442069 444752 NC_000014.9 velvet.60215 99.85 True relocation, scaffold gap is present, inconsistency = 15050493 92075444 92076189 444763 445508 NC_000014.9 velvet.60215 99.87 True relocation, scaffold gap is present, inconsistency = -8502 92067698 92068624 445519 446445 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = 1003253 91063269 91064434 447621 446456 NC_000014.9 velvet.60215 99.92 True fake: not a misassembly (possible transposable element) 77024979 77027458 447622 450095 NC_000014.9 velvet.60215 99.72 True fake: not a misassembly (possible transposable element) 91062598 91063234 451042 450406 NC_000014.9 velvet.60215 98.12 True local misassembly 91060263 91062303 453083 451043 NC_000014.9 velvet.60215 99.95 True relocation, scaffold gap is present, inconsistency = 13986496 77054411 77055699 471151 472439 NC_000014.9 velvet.60215 99.92 True relocation, scaffold gap is present, inconsistency = 2901132 74147148 74151995 479124 473723 NC_000014.9 velvet.60215 99.86 True fake: scaffold gap size wrong estimation (local) 74144159 74146972 482624 479927 NC_000014.9 velvet.60215 95.23 True fake: scaffold gap size wrong estimation (local) 74138920 74142842 489695 485773 NC_000014.9 velvet.60215 99.46 True relocation, scaffold gap is present, inconsistency = 1784851 75929753 75937134 491755 499110 NC_000014.9 velvet.60215 99.47 True relocation, scaffold gap is present, inconsistency = 10631303 65297562 65298439 499998 499121 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 65296317 65297519 504135 502933 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = -28342 65323691 65324245 505103 504549 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 65319318 65320245 509550 508623 NC_000014.9 velvet.60215 99.89 True fake: scaffold gap size wrong estimation (local) 65317833 65319031 511018 509750 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 65315527 65316550 514191 513168 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 65308107 65309181 515316 514202 NC_000014.9 velvet.60215 95.7 True relocation, scaffold gap is present, inconsistency = -7600 65313893 65314600 517130 516423 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = -4163178 69473119 69476019 521085 518182 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = 30991348 100467378 100475090 521096 528772 NC_000014.9 velvet.60215 99.48 True relocation, scaffold gap is present, inconsistency = 9436764 91028775 91030603 530611 528783 NC_000014.9 velvet.60215 99.73 True local misassembly 91027327 91028462 531756 530621 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = 9450976 100479449 100481105 531767 533423 NC_000014.9 velvet.60215 99.88 True relocation, scaffold gap is present, inconsistency = 30999682 69465978 69466699 547212 546491 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 69464225 69465212 549202 548215 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 69455589 69457256 553691 552025 NC_000014.9 velvet.60215 99.82 True fake: scaffold gap size wrong estimation (local) 69452596 69455324 557478 554378 NC_000014.9 velvet.60215 98.89 True fake: scaffold gap size wrong estimation (local) 69450573 69452326 560089 558417 NC_000014.9 velvet.60215 95.33 True fake: scaffold gap size wrong estimation (extensive) 69439302 69439978 561680 561004 NC_000014.9 velvet.60215 98.52 True local misassembly 69438291 69439195 562585 561681 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = -21562459 90999212 91000512 564123 562823 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 90998008 90999069 565277 564222 NC_000014.9 velvet.60215 99.25 True fake: scaffold gap size wrong estimation (local) 90996243 90997472 567827 566598 NC_000014.9 velvet.60215 95.69 True indel: indel (> 5bp) 90995226 90995820 568799 568205 NC_000014.9 velvet.60215 98.15 True fake: scaffold gap size wrong estimation (local) 90991702 90993151 572978 571529 NC_000014.9 velvet.60215 99.72 True fake: not a misassembly (possible transposable element) 100504843 100506195 572989 574341 NC_000014.9 velvet.60215 100.0 True fake: not a misassembly (possible transposable element) 90990323 90991439 575509 574352 NC_000014.9 velvet.60215 96.46 True fake: not a misassembly (possible transposable element) 100508354 100509967 578186 579799 NC_000014.9 velvet.60215 100.0 True fake: not a misassembly (possible transposable element) 90988810 90990256 581496 580050 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 90986453 90988533 584646 582566 NC_000014.9 velvet.60215 99.95 True fake: not a misassembly (possible transposable element) 100510845 100513701 584657 587513 NC_000014.9 velvet.60215 99.89 True fake: not a misassembly (possible transposable element) 90985213 90986432 588743 587524 NC_000014.9 velvet.60215 99.92 True relocation, scaffold gap is present, inconsistency = 9526464 100514237 100515671 590084 591518 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 100516025 100516943 592272 593190 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = 31099046 69414244 69415926 595925 594243 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 69413348 69414073 597167 596442 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 69411213 69411768 599661 599106 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = 75450 69487229 69489336 599672 601779 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 69490502 69496699 604097 610294 NC_000014.9 velvet.60215 99.95 True fake: scaffold gap size wrong estimation (local) 69496794 69497943 611010 612159 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 69498922 69503435 613708 618240 NC_000014.9 velvet.60215 99.51 True fake: scaffold gap size wrong estimation (local) 69503897 69506916 619500 622519 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = 15152991 84660553 84661343 623165 623956 NC_000014.9 velvet.60215 99.62 True relocation, scaffold gap is present, inconsistency = 15858195 100520128 100526823 624546 631240 NC_000014.9 velvet.60215 99.87 True relocation, scaffold gap is present, inconsistency = 9555082 90962615 90964643 633671 631643 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 90957264 90962304 640310 634804 NC_000014.9 velvet.60215 99.86 True fake: scaffold gap size wrong estimation (local) 90955637 90956951 642382 641068 NC_000014.9 velvet.60215 99.7 True indel: indel (<= 5bp) 90954665 90955636 643358 642387 NC_000014.9 velvet.60215 98.77 True local misassembly 90953861 90954444 643942 643359 NC_000014.9 velvet.60215 99.83 True fake: scaffold gap size wrong estimation (local) 90951447 90953404 647384 645413 NC_000014.9 velvet.60215 99.74 True fake: scaffold gap size wrong estimation (local) 90948684 90950845 650986 648826 NC_000014.9 velvet.60215 99.86 True fake: scaffold gap size wrong estimation (local) 90945224 90948413 655324 652136 NC_000014.9 velvet.60215 99.94 True relocation, scaffold gap is present, inconsistency = 21408926 69534884 69536287 655335 656738 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = 36151203 33378636 33383040 662412 657379 NC_000014.9 velvet.60215 99.95 True fake: scaffold gap size wrong estimation (local) 33373395 33378415 668129 663113 NC_000014.9 velvet.60215 99.78 True relocation, scaffold gap is present, inconsistency = 36159603 69538229 69539220 668340 669331 NC_000014.9 velvet.60215 99.9 True local misassembly 69536365 69537568 669342 670545 NC_000014.9 velvet.60215 99.92 True fake: not a misassembly (possible transposable element) 65354103 65356092 672545 670556 NC_000014.9 velvet.60215 99.85 True fake: not a misassembly (possible transposable element) 69541713 69545284 672546 676147 NC_000014.9 velvet.60215 99.0 True relocation, scaffold gap is present, inconsistency = 2760602 72305897 72307116 677377 676158 NC_000014.9 velvet.60215 99.92 True relocation, scaffold gap is present, inconsistency = 38941968 33355542 33363918 685761 677388 NC_000014.9 velvet.60215 99.9 True fake: scaffold gap size wrong estimation (local) 33352045 33355303 690021 686762 NC_000014.9 velvet.60215 99.75 True fake: scaffold gap size wrong estimation (local) 33346398 33351811 697083 691087 NC_000014.9 velvet.60215 98.56 True fake: scaffold gap size wrong estimation (local) 33340470 33345949 703434 697955 NC_000014.9 velvet.60215 99.91 True fake: scaffold gap size wrong estimation (local) 33335128 33340209 709581 704498 NC_000014.9 velvet.60215 99.55 True fake: scaffold gap size wrong estimation (local) 33330197 33334698 715394 710893 NC_000014.9 velvet.60215 99.51 True local misassembly 33320413 33325355 720337 715395 NC_000014.9 velvet.60215 99.98 True indel: indel (> 5bp) 33317623 33320364 723200 720459 NC_000014.9 velvet.60215 99.53 True indel: indel (> 5bp) 33310811 33317572 729962 723201 NC_000014.9 velvet.60215 99.94 True relocation, scaffold gap is present, inconsistency = 36263236 69580819 69581936 729973 731090 NC_000014.9 velvet.60215 99.73 True fake: scaffold gap size wrong estimation (local) 69582289 69583391 731286 732388 NC_000014.9 velvet.60215 99.55 True relocation, scaffold gap is present, inconsistency = 16671403 52905190 52906921 738084 736353 NC_000014.9 velvet.60215 99.83 True fake: scaffold gap size wrong estimation (local) 52902913 52904113 740997 739806 NC_000014.9 velvet.60215 99.24 True relocation, scaffold gap is present, inconsistency = -13707 52914838 52916061 742779 741556 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 52912792 52914116 745609 744288 NC_000014.9 velvet.60215 99.47 True fake: scaffold gap size wrong estimation (local) 52911643 52912507 747345 746481 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 52910044 52911367 748911 747588 NC_000014.9 velvet.60215 99.92 True relocation, scaffold gap is present, inconsistency = 16674961 69586339 69588464 748922 751047 NC_000014.9 velvet.60215 99.81 True relocation, scaffold gap is present, inconsistency = -16733687 52854788 52855577 751058 751849 NC_000014.9 velvet.60215 99.75 True fake: scaffold gap size wrong estimation (local) 52856151 52859834 752892 756575 NC_000014.9 velvet.60215 99.86 True fake: scaffold gap size wrong estimation (local) 52860121 52862117 757659 759655 NC_000014.9 velvet.60215 99.95 True fake: scaffold gap size wrong estimation (local) 52862663 52865070 760877 763294 NC_000014.9 velvet.60215 99.59 True relocation, scaffold gap is present, inconsistency = 9936 52875017 52879998 768403 763305 NC_000014.9 velvet.60215 99.92 True fake: scaffold gap size wrong estimation (local) 52872510 52874891 771640 769200 NC_000014.9 velvet.60215 99.96 True fake: scaffold gap size wrong estimation (local) 52870520 52872277 774329 772572 NC_000014.9 velvet.60215 99.94 True fake: scaffold gap size wrong estimation (local) 52868307 52870247 777176 775236 NC_000014.9 velvet.60215 99.85 True fake: scaffold gap size wrong estimation (local) 52865287 52868199 780885 777906 NC_000014.9 velvet.60215 99.79 True relocation, scaffold gap is present, inconsistency = 17634 52886309 52887152 781361 782204 NC_000014.9 velvet.60215 99.76 True fake: scaffold gap size wrong estimation (local) 52887483 52889907 783317 785740 NC_000014.9 velvet.60215 99.84 True fake: scaffold gap size wrong estimation (local) 52893166 52893844 785751 786429 NC_000014.9 velvet.60215 99.85 True fake: scaffold gap size wrong estimation (local) 52894920 52896753 788418 790251 NC_000014.9 velvet.60215 99.84 True relocation, scaffold gap is present, inconsistency = 1250956 51642470 51643953 791745 790262 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 51641246 51642255 795300 794291 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (extensive) 51630586 51631947 797427 796066 NC_000014.9 velvet.60215 95.3 True fake: scaffold gap size wrong estimation (local) 51629983 51630585 799042 798440 NC_000014.9 velvet.60215 99.34 True fake: scaffold gap size wrong estimation (local) 51629152 51629982 800258 799428 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = 23858861 27769131 27770280 801418 800269 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 27767565 27768864 802833 801534 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = 30024953 57793828 57794435 802844 803451 NC_000014.9 velvet.60215 99.84 True relocation, scaffold gap is present, inconsistency = 6165269 51622817 51628548 809304 803462 NC_000014.9 velvet.60215 99.97 True relocation, scaffold gap is present, inconsistency = 16907356 68537512 68538641 810912 812041 NC_000014.9 velvet.60215 99.91 True relocation, scaffold gap is present, inconsistency = -8569 68530891 68536834 812860 818833 NC_000014.9 velvet.60215 99.3 True relocation, scaffold gap is present, inconsistency = 15676394 52852438 52853919 820892 819411 NC_000014.9 velvet.60215 99.8 True fake: scaffold gap size wrong estimation (local) 52851090 52852150 823153 822093 NC_000014.9 velvet.60215 98.87 True local misassembly 52850247 52850815 823722 823154 NC_000014.9 velvet.60215 99.82 True fake: scaffold gap size wrong estimation (local) 52846594 52847593 824732 823733 NC_000014.9 velvet.60215 99.5 True local misassembly 52848464 52849484 826649 825629 NC_000014.9 velvet.60215 99.9 True fake: scaffold gap size wrong estimation (local) 52844826 52845559 827393 826660 NC_000014.9 velvet.60215 99.59 True indel: indel (> 5bp) 52844172 52844810 828032 827394 NC_000014.9 velvet.60215 98.28 True local misassembly 52843284 52843936 828685 828033 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 52840664 52841595 832447 831516 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 52839739 52840434 834394 833699 NC_000014.9 velvet.60215 99.86 True fake: scaffold gap size wrong estimation (local) 52836886 52838152 838620 837298 NC_000014.9 velvet.60215 95.77 True fake: scaffold gap size wrong estimation (local) 52833822 52836128 842563 840259 NC_000014.9 velvet.60215 99.78 True relocation, scaffold gap is present, inconsistency = 15717787 68555146 68559398 843794 848046 NC_000014.9 velvet.60215 99.91 True fake: scaffold gap size wrong estimation (local) 68560742 68567052 850105 856415 NC_000014.9 velvet.60215 99.87 True fake: scaffold gap size wrong estimation (local) 68567642 68570897 857949 861204 NC_000014.9 velvet.60215 99.97 True relocation, scaffold gap is present, inconsistency = 15735122 52830801 52832507 862923 861217 NC_000014.9 velvet.60215 99.88 True fake: scaffold gap size wrong estimation (local) 52828662 52830353 865781 864088 NC_000014.9 velvet.60215 99.65 True fake: scaffold gap size wrong estimation (local) 52827411 52828412 867338 866337 NC_000014.9 velvet.60215 99.9 True fake: scaffold gap size wrong estimation (local) 52825755 52826370 869847 869232 NC_000014.9 velvet.60215 98.38 True local misassembly 52824342 52825533 871039 869848 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 52823546 52824053 872814 872307 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 52821201 52821701 875406 874906 NC_000014.9 velvet.60215 97.8 True fake: scaffold gap size wrong estimation (extensive) 52809262 52810192 879860 878930 NC_000014.9 velvet.60215 99.89 True fake: scaffold gap size wrong estimation (local) 52807173 52807832 882979 882320 NC_000014.9 velvet.60215 99.85 True fake: scaffold gap size wrong estimation (local) 52804781 52806516 886341 884687 NC_000014.9 velvet.60215 95.31 True fake: scaffold gap size wrong estimation (local) 52801193 52804259 890433 887282 NC_000014.9 velvet.60215 98.73 True fake: not a misassembly (possible transposable element) 50967442 50968213 891159 891930 NC_000014.9 velvet.60215 100.0 True fake: not a misassembly (possible transposable element) 52797953 52799607 894500 892846 NC_000014.9 velvet.60215 99.94 True fake: scaffold gap size wrong estimation (local) 52795023 52795609 898087 897501 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 52766577 52773301 924364 917646 NC_000014.9 velvet.60215 99.81 True fake: scaffold gap size wrong estimation (local) 52765493 52766223 926013 925283 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 52764869 52765411 926750 926208 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = -23164585 75926510 75929443 929994 926761 NC_000014.9 velvet.60215 99.83 True relocation, scaffold gap is present, inconsistency = 4070084 71848998 71850697 935723 937422 NC_000014.9 velvet.60215 99.71 True relocation, scaffold gap is present, inconsistency = -6498114 65352597 65353603 937436 938471 NC_000014.9 velvet.60215 97.1 True local misassembly 65350125 65350777 938482 939134 NC_000014.9 velvet.60215 99.85 True relocation, scaffold gap is present, inconsistency = 4157033 69508437 69508979 939761 940344 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 69509081 69509690 940490 941099 NC_000014.9 velvet.60215 100.0 True local misassembly 69509942 69510510 941100 941668 NC_000014.9 velvet.60215 98.24 True local misassembly 69510697 69511268 941669 942240 NC_000014.9 velvet.60215 98.25 True relocation, scaffold gap is present, inconsistency = -4170653 65343293 65344355 944918 945980 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 65344640 65345744 946215 947304 NC_000014.9 velvet.60215 98.46 True fake: scaffold gap size wrong estimation (local) 65346493 65347954 948682 950180 NC_000014.9 velvet.60215 99.79 True relocation, scaffold gap is present, inconsistency = 4172741 69520706 69522958 950191 952504 NC_000014.9 velvet.60215 97.19 True fake: scaffold gap size wrong estimation (local) 69529528 69530923 952515 953910 NC_000014.9 velvet.60215 99.93 True relocation, scaffold gap is present, inconsistency = 2766825 72297759 72298453 953921 954615 NC_000014.9 velvet.60215 100.0 True fake: not a misassembly (possible transposable element) 65347976 65349912 954626 956562 NC_000014.9 velvet.60215 99.9 True fake: not a misassembly (possible transposable element) 72298750 72302696 956573 960519 NC_000014.9 velvet.60215 99.9 True relocation, scaffold gap is present, inconsistency = 2778533 69518097 69519885 962705 960851 NC_000014.9 velvet.60215 98.29 True fake: scaffold gap size wrong estimation (local) 69516764 69517990 964826 963594 NC_000014.9 velvet.60215 99.92 True relocation, scaffold gap is present, inconsistency = 19600 69537601 69538201 964837 965467 NC_000014.9 velvet.60215 95.09 True fake: scaffold gap size wrong estimation (local) 69539376 69540011 967536 968193 NC_000014.9 velvet.60215 96.35 True fake: scaffold gap size wrong estimation (local) 69540717 69541414 968615 969312 NC_000014.9 velvet.60215 98.57 True relocation, scaffold gap is present, inconsistency = 23935 69515705 69516695 970389 969399 NC_000014.9 velvet.60215 98.99 True fake: scaffold gap size wrong estimation (local) 69513442 69514938 973065 971569 NC_000014.9 velvet.60215 100.0 True fake: not a misassembly (possible transposable element) 52786483 52788134 975094 973499 NC_000014.9 velvet.60215 96.59 True fake: not a misassembly (possible transposable element) 69511801 69512796 976590 975595 NC_000014.9 velvet.60215 99.9 True relocation, scaffold gap is present, inconsistency = 4198408 65299164 65300213 990819 989770 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = 6987664 72289362 72295035 992304 998812 NC_000014.9 velvet.60215 99.5 True fake: scaffold gap size wrong estimation (local) 72295310 72297462 999998 1002150 NC_000014.9 velvet.60215 99.86 True relocation, scaffold gap is present, inconsistency = 6965974 65328415 65329248 1003071 1002238 NC_000014.9 velvet.60215 98.8 True local misassembly 65327634 65328184 1003622 1003072 NC_000014.9 velvet.60215 97.64 True relocation, scaffold gap is present, inconsistency = -4191362 69482916 69487177 1039702 1035441 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 69480903 69482790 1042396 1040510 NC_000014.9 velvet.60215 99.95 True fake: scaffold gap size wrong estimation (local) 69479080 69480650 1044877 1043302 NC_000014.9 velvet.60215 99.75 True relocation, scaffold gap is present, inconsistency = 2823384 72307172 72316268 1048015 1057111 NC_000014.9 velvet.60215 99.86 True fake: scaffold gap size wrong estimation (local) 72316661 72319377 1058325 1061032 NC_000014.9 velvet.60215 99.45 True fake: scaffold gap size wrong estimation (local) 72319646 72320326 1061582 1062262 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 72320595 72323631 1063130 1066166 NC_000014.9 velvet.60215 99.84 True fake: scaffold gap size wrong estimation (local) 72325640 72326738 1069153 1070252 NC_000014.9 velvet.60215 99.64 True fake: scaffold gap size wrong estimation (local) 72326996 72328960 1071057 1073021 NC_000014.9 velvet.60215 99.8 True fake: scaffold gap size wrong estimation (local) 72329174 72334943 1073977 1079887 NC_000014.9 velvet.60215 99.88 True fake: scaffold gap size wrong estimation (local) 72354660 72355210 1104391 1104941 NC_000014.9 velvet.60215 99.64 True relocation, scaffold gap is present, inconsistency = -20259 72334962 72338235 1104952 1108641 NC_000014.9 velvet.60215 98.89 True fake: scaffold gap size wrong estimation (local) 72338346 72341106 1109174 1111971 NC_000014.9 velvet.60215 98.32 True fake: scaffold gap size wrong estimation (local) 72341212 72342324 1112778 1113869 NC_000014.9 velvet.60215 97.73 True relocation, scaffold gap is present, inconsistency = -17603408 54740177 54751035 1115130 1125988 NC_000014.9 velvet.60215 99.87 True fake: scaffold gap size wrong estimation (local) 54753673 54757408 1129572 1133307 NC_000014.9 velvet.60215 99.92 True fake: scaffold gap size wrong estimation (local) 54758882 54762870 1133338 1137316 NC_000014.9 velvet.60215 99.62 True fake: scaffold gap size wrong estimation (local) 54763334 54765386 1138590 1140642 NC_000014.9 velvet.60215 99.85 True relocation, scaffold gap is present, inconsistency = -14191 54751206 54752828 1140653 1142276 NC_000014.9 velvet.60215 99.51 True fake: scaffold gap size wrong estimation (local) 54757476 54758575 1142287 1143386 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 54765530 54772837 1143397 1150704 NC_000014.9 velvet.60215 99.86 True fake: scaffold gap size wrong estimation (local) 54779773 54790678 1155494 1166399 NC_000014.9 velvet.60215 99.92 True fake: scaffold gap size wrong estimation (local) 54790708 54793404 1168731 1171427 NC_000014.9 velvet.60215 99.93 True fake: scaffold gap size wrong estimation (local) 54796032 54796679 1171438 1172085 NC_000014.9 velvet.60215 99.85 True fake: scaffold gap size wrong estimation (local) 54821373 54823300 1193087 1195064 NC_000014.9 velvet.60215 96.48 True relocation, scaffold gap is present, inconsistency = 22323710 77147021 77147644 1195698 1195075 NC_000014.9 velvet.60215 100.0 True relocation, scaffold gap is present, inconsistency = -9113 77152917 77156123 1198915 1195709 NC_000014.9 velvet.60215 99.84 True fake: scaffold gap size wrong estimation (extensive) 77138563 77144247 1204666 1198982 NC_000014.9 velvet.60215 99.79 True relocation, scaffold gap is present, inconsistency = -23681783 100810429 100818781 1214530 1206231 NC_000014.9 velvet.60215 99.24 True fake: scaffold gap size wrong estimation (local) 100807413 100810159 1218444 1215647 NC_000014.9 velvet.60215 99.96 True fake: scaffold gap size wrong estimation (local) 100801853 100803530 1224281 1222604 NC_000014.9 velvet.60215 99.4 True fake: scaffold gap size wrong estimation (local) 100798322 100800807 1228653 1226221 NC_000014.9 velvet.60215 97.86 True fake: scaffold gap size wrong estimation (local) 100796860 100797407 1230181 1229634 NC_000014.9 velvet.60215 98.18 True fake: scaffold gap size wrong estimation (local) 100794376 100795755 1233618 1232239 NC_000014.9 velvet.60215 99.93 True relocation, scaffold gap is present, inconsistency = 23612406 77180621 77181867 1234967 1233721 NC_000014.9 velvet.60215 99.12 True fake: scaffold gap size wrong estimation (local) 77177616 77178349 1236781 1236048 NC_000014.9 velvet.60215 99.59 True relocation, scaffold gap is present, inconsistency = -23615759 100782176 100793364 1247980 1236792 NC_000014.9 velvet.60215 99.98 True fake: scaffold gap size wrong estimation (local) 100772014 100781405 1259020 1249629 NC_000014.9 velvet.60215 99.99 True fake: scaffold gap size wrong estimation (local) 100757678 100758899 1267090 1265869 NC_000014.9 velvet.60215 99.84 True fake: scaffold gap size wrong estimation (local) 100750150 100756874 1276422 1268783 NC_000014.9 velvet.60215 97.61 True fake: scaffold gap size wrong estimation (local) 100748344 100749464 1279046 1277926 NC_000014.9 velvet.60215 95.36 True fake: scaffold gap size wrong estimation (local) 100747010 100747601 1280934 1280343 NC_000014.9 velvet.60215 99.83 True fake: scaffold gap size wrong estimation (local) 100745912 100746620 1282602 1281888 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 100743939 100745376 1284410 1282973 NC_000014.9 velvet.60215 99.93 True fake: scaffold gap size wrong estimation (local) 100742509 100743333 1286483 1285659 NC_000014.9 velvet.60215 100.0 True fake: scaffold gap size wrong estimation (local) 100740371 100742258 1288812 1286925 NC_000014.9 velvet.60215 99.95 True fake: scaffold gap size wrong estimation (local) 100736171 100740066 1293846 1289951 NC_000014.9 velvet.60215 99.92 True fake: scaffold gap size wrong estimation (extensive) 100726879 100728193 1296112 1294798 NC_000014.9 velvet.60215 99.85 True fake: scaffold gap size wrong estimation (local) 100723116 100726785 1300559 1296890 NC_000014.9 velvet.60215 99.92 True CONTIG velvet.60215 1300559 misassembled 73091858 73092590 1 733 NC_000014.9 velvet.60219 99.86 True fake: scaffold gap size wrong estimation (local) 73092709 73093560 1472 2323 NC_000014.9 velvet.60219 99.88 True relocation, scaffold gap is present, inconsistency = 7668 73129100 73130335 31377 30195 NC_000014.9 velvet.60219 95.35 True inversion, scaffold gap is present 73127182 73128713 33147 34679 NC_000014.9 velvet.60219 99.8 True relocation, scaffold gap is present, inconsistency = 15618 73144342 73144934 34690 35282 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 73145194 73145861 35368 36015 NC_000014.9 velvet.60219 97.01 True fake: scaffold gap size wrong estimation (local) 73171675 73174359 61483 64167 NC_000014.9 velvet.60219 100.0 True relocation, scaffold gap is present, inconsistency = 2301890 70867052 70868756 66900 65196 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 70865826 70866939 71940 70818 NC_000014.9 velvet.60219 99.91 True fake: scaffold gap size wrong estimation (local) 70864332 70865538 73822 72377 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 70862730 70864080 75755 74405 NC_000014.9 velvet.60219 99.93 True fake: scaffold gap size wrong estimation (local) 70860164 70862057 79040 77161 NC_000014.9 velvet.60219 99.16 True fake: scaffold gap size wrong estimation (local) 70858358 70860063 81244 79539 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 70855463 70858069 84879 82206 NC_000014.9 velvet.60219 97.64 True fake: not a misassembly (possible transposable element) 73170367 73171651 84880 86164 NC_000014.9 velvet.60219 100.0 True fake: not a misassembly (possible transposable element) 70854711 70855408 86872 86175 NC_000014.9 velvet.60219 100.0 True relocation, scaffold gap is present, inconsistency = 2306286 73162568 73164984 87746 90162 NC_000014.9 velvet.60219 98.88 True fake: scaffold gap size wrong estimation (local) 73166082 73168101 92161 94174 NC_000014.9 velvet.60219 99.7 True fake: scaffold gap size wrong estimation (local) 73168368 73169792 95137 96561 NC_000014.9 velvet.60219 100.0 True fake: not a misassembly (possible transposable element) 73190476 73191570 111732 110638 NC_000014.9 velvet.60219 99.91 True fake: not a misassembly (possible transposable element) 73189542 73190345 113020 113823 NC_000014.9 velvet.60219 100.0 True fake: not a misassembly (possible transposable element) 73186765 73187922 116154 114997 NC_000014.9 velvet.60219 100.0 True fake: not a misassembly (possible transposable element) 73192351 73193056 116674 117379 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 73195469 73196519 119416 120460 NC_000014.9 velvet.60219 99.24 True fake: not a misassembly (possible transposable element) 77799862 77800982 123337 124457 NC_000014.9 velvet.60219 100.0 True fake: not a misassembly (possible transposable element) 73197233 73199804 124907 127504 NC_000014.9 velvet.60219 99.0 True relocation, scaffold gap is present, inconsistency = 4601055 77801018 77801683 127663 128328 NC_000014.9 velvet.60219 100.0 True relocation, scaffold gap is present, inconsistency = 17096493 94899871 94900955 130023 131104 NC_000014.9 velvet.60219 99.36 True relocation, scaffold gap is present, inconsistency = -5104503 89796463 89797678 131115 132330 NC_000014.9 velvet.60219 99.75 True local misassembly 89797921 89798823 132331 133233 NC_000014.9 velvet.60219 98.78 True relocation, scaffold gap is present, inconsistency = -5901251 83897754 83903909 133415 139636 NC_000014.9 velvet.60219 99.46 True fake: scaffold gap size wrong estimation (local) 83905191 83910235 141666 146818 NC_000014.9 velvet.60219 100.0 True relocation, scaffold gap is present, inconsistency = 6475797 90386199 90386737 146985 147520 NC_000014.9 velvet.60219 99.07 True relocation, scaffold gap is present, inconsistency = 4531502 94918250 94920987 147531 150268 NC_000014.9 velvet.60219 99.67 True fake: scaffold gap size wrong estimation (local) 94921126 94924576 151141 155071 NC_000014.9 velvet.60219 99.91 True fake: scaffold gap size wrong estimation (local) 94925259 94928871 156401 160014 NC_000014.9 velvet.60219 99.78 True relocation, scaffold gap is present, inconsistency = -28026 94901024 94910167 160193 169338 NC_000014.9 velvet.60219 99.81 True inversion, scaffold gap is present 94897659 94898863 170554 169349 NC_000014.9 velvet.60219 99.75 True relocation, scaffold gap is present, inconsistency = 50082732 44807020 44814916 170565 178461 NC_000014.9 velvet.60219 99.99 True relocation, scaffold gap is present, inconsistency = 45576213 90391140 90391845 178472 179177 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 90392141 90393135 179299 180293 NC_000014.9 velvet.60219 99.8 True relocation, scaffold gap is present, inconsistency = -12563556 77829590 77830193 180304 180907 NC_000014.9 velvet.60219 99.83 True fake: scaffold gap size wrong estimation (local) 77830451 77831994 183741 185344 NC_000014.9 velvet.60219 96.13 True fake: not a misassembly (possible transposable element) 90395234 90396959 185355 187080 NC_000014.9 velvet.60219 99.94 True fake: not a misassembly (possible transposable element) 77832285 77835805 187091 190611 NC_000014.9 velvet.60219 99.86 True relocation, scaffold gap is present, inconsistency = 25372549 103208365 103210475 192732 190622 NC_000014.9 velvet.60219 100.0 True relocation, scaffold gap is present, inconsistency = 3784566 99420995 99423612 192919 195536 NC_000014.9 velvet.60219 100.0 True relocation, scaffold gap is present, inconsistency = -9026657 90396966 90400561 195547 199192 NC_000014.9 velvet.60219 99.58 True relocation, scaffold gap is present, inconsistency = -25598848 64802718 64808064 200197 205543 NC_000014.9 velvet.60219 99.83 True relocation, scaffold gap is present, inconsistency = -22693 64785382 64789297 205554 209469 NC_000014.9 velvet.60219 99.97 True relocation, scaffold gap is present, inconsistency = 24463337 89252645 89261526 218361 209480 NC_000014.9 velvet.60219 99.84 True fake: scaffold gap size wrong estimation (local) 89250388 89252368 221293 219326 NC_000014.9 velvet.60219 99.19 True fake: scaffold gap size wrong estimation (local) 89246809 89250249 225693 222253 NC_000014.9 velvet.60219 99.77 True relocation, scaffold gap is present, inconsistency = 24425374 64815313 64820716 226412 231815 NC_000014.9 velvet.60219 99.93 True relocation, scaffold gap is present, inconsistency = 6024094 70844821 70847112 231826 234412 NC_000014.9 velvet.60219 97.96 True fake: scaffold gap size wrong estimation (local) 70847263 70848321 234515 235573 NC_000014.9 velvet.60219 99.91 True inversion, scaffold gap is present 70849020 70851060 239395 237304 NC_000014.9 velvet.60219 99.75 True fake: scaffold gap size wrong estimation (extensive) 70833577 70834330 245878 245125 NC_000014.9 velvet.60219 99.87 True fake: scaffold gap size wrong estimation (local) 70829708 70833277 249733 246162 NC_000014.9 velvet.60219 99.78 True fake: scaffold gap size wrong estimation (local) 70828819 70829488 251139 250470 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 70827242 70828584 252999 251657 NC_000014.9 velvet.60219 99.93 True fake: scaffold gap size wrong estimation (local) 70824421 70825319 256496 255598 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 70818775 70824129 263690 257403 NC_000014.9 velvet.60219 99.85 True fake: scaffold gap size wrong estimation (local) 70817548 70818494 264973 264027 NC_000014.9 velvet.60219 98.73 True local misassembly 70816487 70817325 265933 265095 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 70814489 70816171 269037 267367 NC_000014.9 velvet.60219 99.22 True relocation, scaffold gap is present, inconsistency = 60594 70878357 70880595 270629 272867 NC_000014.9 velvet.60219 99.91 True fake: scaffold gap size wrong estimation (local) 70880982 70884006 273134 277069 NC_000014.9 velvet.60219 99.63 True fake: scaffold gap size wrong estimation (local) 70884213 70892179 278134 286759 NC_000014.9 velvet.60219 99.97 True fake: scaffold gap size wrong estimation (local) 70892439 70893701 287528 288790 NC_000014.9 velvet.60219 99.92 True fake: scaffold gap size wrong estimation (local) 70893901 70895472 289224 290795 NC_000014.9 velvet.60219 99.87 True fake: scaffold gap size wrong estimation (local) 70895682 70899453 291407 295183 NC_000014.9 velvet.60219 99.92 True fake: scaffold gap size wrong estimation (local) 70900947 70901903 297611 298567 NC_000014.9 velvet.60219 99.9 True local misassembly 70902124 70902727 298568 299171 NC_000014.9 velvet.60219 98.34 True fake: scaffold gap size wrong estimation (local) 70903452 70907514 300961 305023 NC_000014.9 velvet.60219 99.9 True fake: scaffold gap size wrong estimation (local) 70908491 70910060 306490 308498 NC_000014.9 velvet.60219 99.94 True fake: scaffold gap size wrong estimation (local) 70910238 70912013 308855 310630 NC_000014.9 velvet.60219 99.83 True fake: scaffold gap size wrong estimation (local) 70912260 70914337 311602 313675 NC_000014.9 velvet.60219 99.76 True relocation, scaffold gap is present, inconsistency = 98729 70811611 70813520 315595 313686 NC_000014.9 velvet.60219 99.06 True fake: scaffold gap size wrong estimation (local) 70810892 70811610 317303 316585 NC_000014.9 velvet.60219 98.61 True local misassembly 70809671 70810682 318315 317304 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 70807431 70808416 321347 320362 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 70803340 70807208 326143 322275 NC_000014.9 velvet.60219 99.95 True relocation, scaffold gap is present, inconsistency = -24375399 95177150 95178053 327701 326829 NC_000014.9 velvet.60219 96.4 True fake: scaffold gap size wrong estimation (local) 95170905 95175503 334636 330038 NC_000014.9 velvet.60219 99.98 True fake: scaffold gap size wrong estimation (local) 95166890 95169420 339610 337080 NC_000014.9 velvet.60219 100.0 True relocation, scaffold gap is present, inconsistency = 35681200 59478596 59485679 339621 346704 NC_000014.9 velvet.60219 99.84 True relocation, scaffold gap is present, inconsistency = 21703992 81189682 81193182 346715 350211 NC_000014.9 velvet.60219 99.8 True fake: not a misassembly (possible transposable element) 62429328 62434006 350222 354901 NC_000014.9 velvet.60219 99.91 True fake: not a misassembly (possible transposable element) 81202526 81207652 354913 360020 NC_000014.9 velvet.60219 99.43 True fake: scaffold gap size wrong estimation (local) 81207747 81208354 360165 360772 NC_000014.9 velvet.60219 99.67 True relocation, scaffold gap is present, inconsistency = -18774079 62434286 62434785 360783 361283 NC_000014.9 velvet.60219 99.6 True relocation, scaffold gap is present, inconsistency = -7523 62427562 62429108 361583 363129 NC_000014.9 velvet.60219 99.94 True relocation, scaffold gap is present, inconsistency = -12164328 50264791 50265659 363140 364008 NC_000014.9 velvet.60219 100.0 True relocation, scaffold gap is present, inconsistency = 12151697 62417367 62423121 364019 369771 NC_000014.9 velvet.60219 99.79 True fake: scaffold gap size wrong estimation (local) 62452334 62473259 396764 417701 NC_000014.9 velvet.60219 99.75 True fake: scaffold gap size wrong estimation (local) 62473547 62482899 418734 428057 NC_000014.9 velvet.60219 99.63 True fake: scaffold gap size wrong estimation (local) 62513147 62517404 455860 460254 NC_000014.9 velvet.60219 97.72 True fake: scaffold gap size wrong estimation (local) 62517484 62519008 461160 462684 NC_000014.9 velvet.60219 95.48 True fake: scaffold gap size wrong estimation (local) 62519351 62520149 463989 464787 NC_000014.9 velvet.60219 99.0 True relocation, scaffold gap is present, inconsistency = 11808016 50699919 50706306 477023 469816 NC_000014.9 velvet.60219 97.83 True fake: scaffold gap size wrong estimation (local) 50698855 50699503 480940 480292 NC_000014.9 velvet.60219 98.46 True relocation, scaffold gap is present, inconsistency = 11807067 62510348 62513071 484718 487440 NC_000014.9 velvet.60219 99.93 True fake: scaffold gap size wrong estimation (local) 62541890 62545130 511938 515178 NC_000014.9 velvet.60219 99.94 True fake: scaffold gap size wrong estimation (local) 62545131 62546063 521337 522269 NC_000014.9 velvet.60219 97.86 True indel: indel (<= 5bp) 62546066 62548597 522270 524801 NC_000014.9 velvet.60219 99.88 True indel: indel (<= 5bp) 62548599 62549321 524802 525524 NC_000014.9 velvet.60219 99.45 True fake: not a misassembly (possible transposable element) 50685333 50686479 526681 525535 NC_000014.9 velvet.60219 99.74 True fake: not a misassembly (possible transposable element) 62549662 62550825 526692 527854 NC_000014.9 velvet.60219 99.74 True fake: scaffold gap size wrong estimation (local) 62550828 62551419 530772 531363 NC_000014.9 velvet.60219 100.0 True fake: not a misassembly (possible transposable element) 50681616 50682585 533818 532849 NC_000014.9 velvet.60219 99.79 True fake: not a misassembly (possible transposable element) 62552728 62557354 535312 539938 NC_000014.9 velvet.60219 99.81 True relocation, scaffold gap is present, inconsistency = 12174151 50375797 50378566 542718 539949 NC_000014.9 velvet.60219 99.96 True fake: scaffold gap size wrong estimation (local) 50341783 50344456 576220 573547 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 50337458 50341432 582227 577306 NC_000014.9 velvet.60219 99.95 True relocation, scaffold gap is present, inconsistency = -23369 50358906 50360399 584148 582655 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 50356633 50358627 586865 584871 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 50354215 50356455 589983 587743 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 50351722 50353763 593224 591183 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 50350045 50351460 595385 593970 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 50346920 50349747 599118 596291 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 50344709 50346638 602073 600144 NC_000014.9 velvet.60219 100.0 True relocation, scaffold gap is present, inconsistency = 2853692 47470728 47473788 619302 622362 NC_000014.9 velvet.60219 99.9 True relocation, scaffold gap is present, inconsistency = -8492244 38981555 38985107 622373 626032 NC_000014.9 velvet.60219 99.35 True relocation, scaffold gap is present, inconsistency = 8482603 47467721 47469271 626043 628278 NC_000014.9 velvet.60219 99.08 True relocation, scaffold gap is present, inconsistency = -8474442 38996482 38997737 629931 631227 NC_000014.9 velvet.60219 99.76 True relocation, scaffold gap is present, inconsistency = 57256768 96254529 96257487 631251 634209 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 96257572 96258616 634396 635440 NC_000014.9 velvet.60219 100.0 True relocation, scaffold gap is present, inconsistency = -9117 96249510 96254270 635451 640417 NC_000014.9 velvet.60219 99.98 True fake: scaffold gap size wrong estimation (local) 96258814 96260041 640428 641647 NC_000014.9 velvet.60219 99.34 True fake: scaffold gap size wrong estimation (local) 96260322 96262605 642526 644809 NC_000014.9 velvet.60219 99.96 True fake: scaffold gap size wrong estimation (local) 96262912 96266751 645944 649781 NC_000014.9 velvet.60219 99.95 True fake: scaffold gap size wrong estimation (local) 96266964 96271864 650787 656384 NC_000014.9 velvet.60219 99.71 True fake: scaffold gap size wrong estimation (local) 96272128 96273118 657004 657994 NC_000014.9 velvet.60219 99.9 True fake: scaffold gap size wrong estimation (local) 96273119 96279012 660530 666423 NC_000014.9 velvet.60219 99.78 True fake: scaffold gap size wrong estimation (local) 96280877 96287001 666434 672558 NC_000014.9 velvet.60219 99.87 True fake: scaffold gap size wrong estimation (local) 96287284 96295990 673555 683182 NC_000014.9 velvet.60219 99.58 True fake: scaffold gap size wrong estimation (local) 96297699 96302186 685941 690589 NC_000014.9 velvet.60219 95.57 True fake: scaffold gap size wrong estimation (local) 96302611 96304626 691650 693665 NC_000014.9 velvet.60219 99.9 True fake: scaffold gap size wrong estimation (local) 96304649 96307154 694320 697269 NC_000014.9 velvet.60219 99.92 True fake: scaffold gap size wrong estimation (local) 96307441 96308199 697711 698469 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 96308605 96314698 699327 706133 NC_000014.9 velvet.60219 99.9 True fake: not a misassembly (possible transposable element) 38998030 38998968 706205 707143 NC_000014.9 velvet.60219 100.0 True fake: not a misassembly (possible transposable element) 96314994 96324281 707154 716441 NC_000014.9 velvet.60219 99.98 True fake: scaffold gap size wrong estimation (local) 96324662 96327868 717582 720851 NC_000014.9 velvet.60219 99.75 True fake: scaffold gap size wrong estimation (local) 96328106 96330508 722255 724579 NC_000014.9 velvet.60219 96.74 True fake: scaffold gap size wrong estimation (local) 96330779 96332227 725642 727090 NC_000014.9 velvet.60219 99.79 True relocation, scaffold gap is present, inconsistency = -57333009 38999229 39000705 727101 728577 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 39000985 39001529 729073 729613 NC_000014.9 velvet.60219 99.27 True fake: scaffold gap size wrong estimation (local) 39001649 39008606 730328 737360 NC_000014.9 velvet.60219 99.97 True fake: scaffold gap size wrong estimation (local) 39008701 39012793 737371 742467 NC_000014.9 velvet.60219 99.8 True fake: scaffold gap size wrong estimation (local) 39013086 39015696 743544 746154 NC_000014.9 velvet.60219 99.81 True relocation, scaffold gap is present, inconsistency = 9010421 48027894 48030791 750823 747931 NC_000014.9 velvet.60219 99.79 True fake: scaffold gap size wrong estimation (local) 48019584 48027609 760871 751923 NC_000014.9 velvet.60219 99.87 True fake: not a misassembly (possible transposable element) 47919255 47923587 761004 765336 NC_000014.9 velvet.60219 99.77 True fake: not a misassembly (possible transposable element) 48011701 48014188 767884 765347 NC_000014.9 velvet.60219 99.92 True relocation, scaffold gap is present, inconsistency = 86727 47923906 47924699 768159 768952 NC_000014.9 velvet.60219 98.49 True fake: scaffold gap size wrong estimation (local) 47926125 47929891 771025 774791 NC_000014.9 velvet.60219 99.76 True fake: scaffold gap size wrong estimation (local) 47930182 47932829 775903 778650 NC_000014.9 velvet.60219 99.7 True relocation, scaffold gap is present, inconsistency = -8890762 39042079 39042913 778662 779496 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 39043075 39046160 780532 783606 NC_000014.9 velvet.60219 99.42 True fake: not a misassembly (possible transposable element) 47933334 47934764 787879 789309 NC_000014.9 velvet.60219 99.86 True fake: not a misassembly (possible transposable element) 39046538 39048422 789320 791204 NC_000014.9 velvet.60219 100.0 True fake: not a misassembly (possible transposable element) 47935061 47936400 791215 792554 NC_000014.9 velvet.60219 100.0 True fake: not a misassembly (possible transposable element) 39048504 39049106 792555 793157 NC_000014.9 velvet.60219 99.84 True relocation, scaffold gap is present, inconsistency = 8887279 47936566 47937315 793338 794087 NC_000014.9 velvet.60219 99.87 True fake: scaffold gap size wrong estimation (local) 47939363 47940308 796693 797638 NC_000014.9 velvet.60219 99.79 True fake: not a misassembly (possible transposable element) 47954130 47954927 797649 798446 NC_000014.9 velvet.60219 99.75 True fake: not a misassembly (possible transposable element) 47954959 47957919 812453 815421 NC_000014.9 velvet.60219 99.7 True fake: scaffold gap size wrong estimation (local) 47958197 47965840 816378 824130 NC_000014.9 velvet.60219 99.82 True inversion, scaffold gap is present 47965831 47968162 828133 825802 NC_000014.9 velvet.60219 99.91 True relocation, scaffold gap is present, inconsistency = 8895076 39069707 39070744 829181 828144 NC_000014.9 velvet.60219 100.0 True relocation, scaffold gap is present, inconsistency = 8872022 47943353 47944872 829768 831287 NC_000014.9 velvet.60219 99.67 True fake: scaffold gap size wrong estimation (local) 47944982 47946154 832443 833615 NC_000014.9 velvet.60219 99.83 True fake: scaffold gap size wrong estimation (local) 47973155 47986767 854708 868320 NC_000014.9 velvet.60219 99.89 True fake: scaffold gap size wrong estimation (local) 47987062 47992574 869353 875967 NC_000014.9 velvet.60219 99.47 True relocation, scaffold gap is present, inconsistency = 33338 47951325 47953585 878365 876106 NC_000014.9 velvet.60219 99.87 True fake: scaffold gap size wrong estimation (local) 47946969 47951191 883533 879311 NC_000014.9 velvet.60219 99.86 True relocation, scaffold gap is present, inconsistency = 41395 47992606 47995191 883553 886135 NC_000014.9 velvet.60219 99.81 True fake: scaffold gap size wrong estimation (local) 47995469 48011728 887225 903486 NC_000014.9 velvet.60219 99.88 True fake: scaffold gap size wrong estimation (local) 48014246 48016551 904511 906816 NC_000014.9 velvet.60219 99.91 True relocation, scaffold gap is present, inconsistency = 159628 48179555 48183327 910192 913931 NC_000014.9 velvet.60219 97.34 True fake: scaffold gap size wrong estimation (local) 48183740 48187112 914806 918734 NC_000014.9 velvet.60219 99.55 True inversion, scaffold gap is present 48178550 48179518 920013 919045 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 48176209 48178306 922894 920797 NC_000014.9 velvet.60219 99.95 True fake: scaffold gap size wrong estimation (local) 48174225 48175915 925545 923855 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 48173007 48174022 927103 926094 NC_000014.9 velvet.60219 99.2 True fake: scaffold gap size wrong estimation (local) 48170415 48172917 930275 927715 NC_000014.9 velvet.60219 99.96 True fake: scaffold gap size wrong estimation (local) 48165518 48170296 935854 931089 NC_000014.9 velvet.60219 98.93 True fake: scaffold gap size wrong estimation (local) 48150843 48165264 951432 936975 NC_000014.9 velvet.60219 99.99 True fake: scaffold gap size wrong estimation (local) 48149699 48150452 953190 952462 NC_000014.9 velvet.60219 96.37 True fake: scaffold gap size wrong estimation (local) 48142225 48149599 961120 953589 NC_000014.9 velvet.60219 99.97 True relocation, scaffold gap is present, inconsistency = 15556719 63707746 63708271 962548 963073 NC_000014.9 velvet.60219 100.0 True local misassembly 63708557 63709138 963074 963655 NC_000014.9 velvet.60219 98.28 True relocation, scaffold gap is present, inconsistency = 15566825 48139743 48141721 965644 963666 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 48131854 48134466 970055 967450 NC_000014.9 velvet.60219 99.62 True fake: scaffold gap size wrong estimation (local) 48128243 48131136 974370 971477 NC_000014.9 velvet.60219 99.9 True fake: scaffold gap size wrong estimation (local) 48119036 48128020 984375 975310 NC_000014.9 velvet.60219 99.01 True fake: scaffold gap size wrong estimation (local) 48117827 48118781 986088 985134 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 48105823 48117568 999495 986894 NC_000014.9 velvet.60219 99.73 True fake: not a misassembly (possible transposable element) 63746240 63746811 999571 1000142 NC_000014.9 velvet.60219 100.0 True fake: not a misassembly (possible transposable element) 48102459 48105918 1003655 1000153 NC_000014.9 velvet.60219 98.49 True relocation, scaffold gap is present, inconsistency = 15617576 63729782 63730313 1009943 1010474 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 63730661 63731221 1010687 1011247 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 63731511 63732281 1011913 1012683 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 63733862 63734544 1015086 1015768 NC_000014.9 velvet.60219 100.0 True local misassembly 63734669 63735341 1015769 1016441 NC_000014.9 velvet.60219 98.51 True fake: scaffold gap size wrong estimation (local) 63735567 63738263 1017609 1020262 NC_000014.9 velvet.60219 98.33 True fake: scaffold gap size wrong estimation (local) 63739163 63740700 1022483 1023954 NC_000014.9 velvet.60219 95.55 True fake: scaffold gap size wrong estimation (local) 63741506 63742187 1026147 1026828 NC_000014.9 velvet.60219 100.0 True relocation, scaffold gap is present, inconsistency = -23598 63723983 63724641 1032222 1032880 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 63725373 63729327 1034514 1039128 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (extensive) 63744544 63745154 1046868 1047478 NC_000014.9 velvet.60219 100.0 True fake: not a misassembly (possible transposable element) 63745360 63746189 1048318 1047489 NC_000014.9 velvet.60219 100.0 True fake: not a misassembly (possible transposable element) 63747606 63748277 1050708 1051379 NC_000014.9 velvet.60219 98.51 True fake: scaffold gap size wrong estimation (local) 63764853 63765387 1061124 1061658 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (local) 63766319 63767122 1062704 1063507 NC_000014.9 velvet.60219 100.0 True fake: not a misassembly (possible transposable element) 48094974 48098170 1069916 1066720 NC_000014.9 velvet.60219 99.72 True fake: not a misassembly (possible transposable element) 63773500 63774080 1069927 1070507 NC_000014.9 velvet.60219 100.0 True inversion, scaffold gap is present 63774490 63775015 1071805 1071281 NC_000014.9 velvet.60219 99.62 True fake: not a misassembly (possible transposable element) 63767417 63767952 1072786 1073321 NC_000014.9 velvet.60219 100.0 True fake: not a misassembly (possible transposable element) 63770033 63770726 1074227 1073534 NC_000014.9 velvet.60219 100.0 True inversion, scaffold gap is present 63768221 63769083 1077469 1078331 NC_000014.9 velvet.60219 98.84 True relocation, scaffold gap is present, inconsistency = -15711061 48059875 48062171 1080184 1082474 NC_000014.9 velvet.60219 99.69 True fake: scaffold gap size wrong estimation (local) 48063487 48070067 1084530 1091118 NC_000014.9 velvet.60219 99.89 True fake: not a misassembly (possible transposable element) 48062407 48063410 1092132 1091129 NC_000014.9 velvet.60219 100.0 True fake: not a misassembly (possible transposable element) 48070845 48075821 1092680 1098262 NC_000014.9 velvet.60219 99.6 True relocation, scaffold gap is present, inconsistency = 151661 47915254 47919001 1102192 1098445 NC_000014.9 velvet.60219 99.87 True fake: scaffold gap size wrong estimation (local) 47910764 47915122 1107373 1103015 NC_000014.9 velvet.60219 99.77 True fake: scaffold gap size wrong estimation (local) 47907107 47910453 1111799 1108454 NC_000014.9 velvet.60219 99.82 True fake: scaffold gap size wrong estimation (local) 47898396 47901182 1115716 1112900 NC_000014.9 velvet.60219 98.44 True fake: scaffold gap size wrong estimation (local) 47894969 47897241 1120869 1118595 NC_000014.9 velvet.60219 99.87 True fake: scaffold gap size wrong estimation (local) 47893151 47894476 1123394 1122078 NC_000014.9 velvet.60219 98.94 True relocation, scaffold gap is present, inconsistency = 138115 48034932 48042387 1125735 1133697 NC_000014.9 velvet.60219 99.82 True fake: scaffold gap size wrong estimation (local) 48048490 48051306 1133708 1136524 NC_000014.9 velvet.60219 99.93 True relocation, scaffold gap is present, inconsistency = -8918 48042399 48043682 1136535 1137818 NC_000014.9 velvet.60219 100.0 True fake: scaffold gap size wrong estimation (extensive) 48051491 48052117 1137829 1138455 NC_000014.9 velvet.60219 99.84 True fake: scaffold gap size wrong estimation (local) 48052410 48055895 1138890 1142384 NC_000014.9 velvet.60219 99.83 True fake: not a misassembly (possible transposable element) 50326258 50326796 1142395 1142933 NC_000014.9 velvet.60219 100.0 True fake: not a misassembly (possible transposable element) 48056814 48059372 1144099 1147363 NC_000014.9 velvet.60219 99.96 True relocation, scaffold gap is present, inconsistency = -16559 48044161 48044703 1148711 1149253 NC_000014.9 velvet.60219 99.45 True fake: scaffold gap size wrong estimation (local) 48045032 48048458 1150265 1153750 NC_000014.9 velvet.60219 99.94 True relocation, scaffold gap is present, inconsistency = 11655 48075978 48081199 1169615 1174824 NC_000014.9 velvet.60219 99.71 True fake: scaffold gap size wrong estimation (local) 48081628 48089497 1175933 1184007 NC_000014.9 velvet.60219 99.85 True fake: scaffold gap size wrong estimation (local) 48089691 48094984 1184981 1190359 NC_000014.9 velvet.60219 99.91 True CONTIG velvet.60219 1190421 misassembled 102038243 102039930 18069 19756 NC_000014.9 velvet.60237 98.28 True fake: scaffold gap size wrong estimation (local) 102040120 102042977 20812 23694 NC_000014.9 velvet.60237 98.68 True fake: scaffold gap size wrong estimation (local) 102043315 102045062 24865 26612 NC_000014.9 velvet.60237 100.0 True fake: scaffold gap size wrong estimation (local) 102047674 102051180 30488 33994 NC_000014.9 velvet.60237 100.0 True fake: not a misassembly (possible transposable element) 102053998 102054555 34594 34037 NC_000014.9 velvet.60237 100.0 True fake: not a misassembly (possible transposable element) 102052434 102053155 36108 36829 NC_000014.9 velvet.60237 100.0 True fake: scaffold gap size wrong estimation (local) 102054972 102055859 39415 40302 NC_000014.9 velvet.60237 100.0 True relocation, scaffold gap is present, inconsistency = 10156 102079443 102080677 53730 54963 NC_000014.9 velvet.60237 99.84 True relocation, scaffold gap is present, inconsistency = 53144 102023819 102024679 57443 56583 NC_000014.9 velvet.60237 100.0 True fake: scaffold gap size wrong estimation (extensive) 102011756 102012963 62066 60859 NC_000014.9 velvet.60237 100.0 True relocation, scaffold gap is present, inconsistency = -9442 102019738 102021187 63526 62077 NC_000014.9 velvet.60237 100.0 True fake: scaffold gap size wrong estimation (local) 102018775 102019653 64873 63995 NC_000014.9 velvet.60237 100.0 True indel: indel (> 5bp) 102018092 102018694 65547 64945 NC_000014.9 velvet.60237 98.34 True local misassembly 102015411 102017687 67824 65548 NC_000014.9 velvet.60237 97.32 True fake: scaffold gap size wrong estimation (local) 102008744 102011651 71389 68362 NC_000014.9 velvet.60237 100.0 True fake: scaffold gap size wrong estimation (local) 102006862 102008516 73809 72155 NC_000014.9 velvet.60237 100.0 True fake: scaffold gap size wrong estimation (local) 102000848 102001783 74755 73820 NC_000014.9 velvet.60237 100.0 True fake: scaffold gap size wrong estimation (local) 101999206 102000571 76250 74885 NC_000014.9 velvet.60237 100.0 True relocation, scaffold gap is present, inconsistency = -15075 102013251 102014270 77280 76261 NC_000014.9 velvet.60237 100.0 True fake: scaffold gap size wrong estimation (local) 101985596 101990599 108530 103528 NC_000014.9 velvet.60237 99.98 True fake: scaffold gap size wrong estimation (local) 101978442 101982309 113465 108541 NC_000014.9 velvet.60237 99.4 True fake: scaffold gap size wrong estimation (local) 101963598 101964476 131209 130331 NC_000014.9 velvet.60237 100.0 True fake: scaffold gap size wrong estimation (local) 101961816 101963318 133963 132461 NC_000014.9 velvet.60237 99.27 True fake: scaffold gap size wrong estimation (local) 101960303 101961728 135610 134185 NC_000014.9 velvet.60237 100.0 True fake: scaffold gap size wrong estimation (local) 101957652 101959011 139138 137728 NC_000014.9 velvet.60237 100.0 True fake: scaffold gap size wrong estimation (local) 101955398 101957067 142142 140473 NC_000014.9 velvet.60237 99.94 True fake: scaffold gap size wrong estimation (local) 101952579 101953732 146634 145481 NC_000014.9 velvet.60237 99.91 True fake: scaffold gap size wrong estimation (local) 101947532 101949691 148806 146645 NC_000014.9 velvet.60237 99.77 True fake: scaffold gap size wrong estimation (local) 101945041 101945655 151760 151146 NC_000014.9 velvet.60237 99.67 True fake: scaffold gap size wrong estimation (local) 101932685 101934264 164757 163178 NC_000014.9 velvet.60237 99.87 True fake: not a misassembly (possible transposable element) 101944225 101944756 165299 164768 NC_000014.9 velvet.60237 100.0 True fake: not a misassembly (possible transposable element) 101904412 101905077 195009 194344 NC_000014.9 velvet.60237 98.5 True fake: scaffold gap size wrong estimation (local) 101903018 101903657 195934 195295 NC_000014.9 velvet.60237 100.0 True CONTIG velvet.60237 196029 misassembled 21133331 21134347 2200 3216 NC_000014.9 velvet.60238 100.0 True fake: scaffold gap size wrong estimation (local) 21134695 21135274 3599 4224 NC_000014.9 velvet.60238 99.82 True CONTIG velvet.60238 4224 correct 77504232 77505522 33667 32373 NC_000014.9 velvet.60248 99.46 True fake: scaffold gap size wrong estimation (local) 77503003 77503525 34585 34063 NC_000014.9 velvet.60248 99.81 True fake: scaffold gap size wrong estimation (local) 77502007 77502863 36402 35546 NC_000014.9 velvet.60248 99.65 True fake: scaffold gap size wrong estimation (local) 77499624 77500844 39139 37875 NC_000014.9 velvet.60248 99.75 True fake: scaffold gap size wrong estimation (local) 77497807 77499515 41595 39887 NC_000014.9 velvet.60248 99.88 True CONTIG velvet.60248 45012 correct CONTIG velvet.60299 225 unaligned 84154456 84155796 1341 1 NC_000014.9 velvet.60320 99.7 True fake: scaffold gap size wrong estimation (local) 84122109 84127722 30550 24713 NC_000014.9 velvet.60320 99.87 True fake: scaffold gap size wrong estimation (local) 84118091 84121848 35910 31374 NC_000014.9 velvet.60320 99.84 True relocation, scaffold gap is present, inconsistency = -18503 84133869 84134525 38635 37979 NC_000014.9 velvet.60320 97.87 True fake: scaffold gap size wrong estimation (local) 84131386 84132911 42008 40483 NC_000014.9 velvet.60320 99.21 True local misassembly 84127754 84131088 45343 42009 NC_000014.9 velvet.60320 99.76 True relocation, scaffold gap is present, inconsistency = -11235 84094720 84096925 89586 87407 NC_000014.9 velvet.60320 98.82 True fake: scaffold gap size wrong estimation (local) 84094035 84094592 90533 89976 NC_000014.9 velvet.60320 100.0 True fake: scaffold gap size wrong estimation (local) 84085641 84093659 99812 91517 NC_000014.9 velvet.60320 99.85 True fake: scaffold gap size wrong estimation (local) 84053495 84065561 132443 119508 NC_000014.9 velvet.60320 99.96 True fake: scaffold gap size wrong estimation (local) 84049577 84053319 137099 133357 NC_000014.9 velvet.60320 99.97 True relocation, scaffold gap is present, inconsistency = 38207073 45836040 45841510 143655 138093 NC_000014.9 velvet.60320 100.0 True fake: scaffold gap size wrong estimation (local) 45823998 45835783 156409 144619 NC_000014.9 velvet.60320 99.95 True relocation, scaffold gap is present, inconsistency = -38206995 84028244 84030982 159235 156420 NC_000014.9 velvet.60320 99.96 True relocation, scaffold gap is present, inconsistency = 13603357 70423687 70424365 159757 160440 NC_000014.9 velvet.60320 99.12 True fake: scaffold gap size wrong estimation (local) 70425265 70426622 161984 163341 NC_000014.9 velvet.60320 99.85 True fake: scaffold gap size wrong estimation (local) 70427578 70428456 164873 165751 NC_000014.9 velvet.60320 99.89 True relocation, scaffold gap is present, inconsistency = 29568095 100000926 100002618 171827 170126 NC_000014.9 velvet.60320 97.76 True fake: scaffold gap size wrong estimation (local) 99999585 100000298 174020 173307 NC_000014.9 velvet.60320 99.86 True fake: scaffold gap size wrong estimation (local) 99998274 99999561 176461 175038 NC_000014.9 velvet.60320 99.84 True relocation, scaffold gap is present, inconsistency = -1675020 101671971 101673283 177784 176472 NC_000014.9 velvet.60320 100.0 True fake: scaffold gap size wrong estimation (local) 101666970 101669062 180255 178163 NC_000014.9 velvet.60320 99.95 True local misassembly 101669097 101669780 180949 180266 NC_000014.9 velvet.60320 99.71 True fake: scaffold gap size wrong estimation (local) 101665094 101666687 183124 181531 NC_000014.9 velvet.60320 99.37 True relocation, scaffold gap is present, inconsistency = 31263164 70396663 70401358 183696 188391 NC_000014.9 velvet.60320 99.85 True fake: scaffold gap size wrong estimation (local) 70401776 70402600 189714 190538 NC_000014.9 velvet.60320 99.88 True fake: scaffold gap size wrong estimation (local) 70402698 70403383 190752 191437 NC_000014.9 velvet.60320 99.85 True fake: scaffold gap size wrong estimation (local) 70406568 70407121 191448 192001 NC_000014.9 velvet.60320 99.64 True fake: scaffold gap size wrong estimation (local) 70409155 70409965 194785 195595 NC_000014.9 velvet.60320 99.88 True fake: not a misassembly (possible transposable element) 98091104 98091871 197335 196575 NC_000014.9 velvet.60320 99.09 True fake: not a misassembly (possible transposable element) 70419080 70419857 201633 202410 NC_000014.9 velvet.60320 98.71 True fake: scaffold gap size wrong estimation (local) 70419989 70423054 202591 205663 NC_000014.9 velvet.60320 99.87 True relocation, scaffold gap is present, inconsistency = 24596524 45821510 45823387 207618 205741 NC_000014.9 velvet.60320 99.79 True indel: indel (> 5bp) 45820135 45821509 209001 207627 NC_000014.9 velvet.60320 99.93 True indel: indel (> 5bp) 45818300 45820134 210845 209011 NC_000014.9 velvet.60320 99.46 True local misassembly 45817149 45818084 211781 210846 NC_000014.9 velvet.60320 99.47 True indel: indel (> 5bp) 45816112 45817148 212824 211788 NC_000014.9 velvet.60320 98.84 True indel: indel (> 5bp) 45814907 45816086 214004 212825 NC_000014.9 velvet.60320 100.0 True local misassembly 45812764 45814373 216147 214538 NC_000014.9 velvet.60320 99.88 True fake: scaffold gap size wrong estimation (local) 45796458 45812495 233537 217137 NC_000014.9 velvet.60320 99.32 True fake: scaffold gap size wrong estimation (local) 45788333 45789211 237209 236331 NC_000014.9 velvet.60320 99.89 True fake: scaffold gap size wrong estimation (local) 45782676 45787695 244591 238110 NC_000014.9 velvet.60320 99.76 True fake: scaffold gap size wrong estimation (local) 45781642 45782378 245641 244901 NC_000014.9 velvet.60320 100.0 True fake: scaffold gap size wrong estimation (local) 45780586 45781548 246776 245795 NC_000014.9 velvet.60320 95.37 True fake: scaffold gap size wrong estimation (local) 45778189 45780090 249931 248048 NC_000014.9 velvet.60320 98.94 True fake: scaffold gap size wrong estimation (local) 45771484 45777774 258387 251262 NC_000014.9 velvet.60320 99.81 True fake: scaffold gap size wrong estimation (local) 45768174 45769919 262494 260749 NC_000014.9 velvet.60320 100.0 True fake: scaffold gap size wrong estimation (local) 45765699 45766697 265826 264828 NC_000014.9 velvet.60320 100.0 True fake: scaffold gap size wrong estimation (local) 45762204 45765447 270299 266964 NC_000014.9 velvet.60320 96.86 True fake: scaffold gap size wrong estimation (local) 45759583 45762050 273653 271186 NC_000014.9 velvet.60320 100.0 True fake: scaffold gap size wrong estimation (local) 45758145 45759298 278180 277027 NC_000014.9 velvet.60320 100.0 True fake: scaffold gap size wrong estimation (local) 45748019 45750088 290137 288065 NC_000014.9 velvet.60320 99.04 True fake: scaffold gap size wrong estimation (local) 45746307 45747717 292511 291101 NC_000014.9 velvet.60320 99.72 True fake: scaffold gap size wrong estimation (local) 45741006 45746041 299086 293329 NC_000014.9 velvet.60320 99.98 True fake: scaffold gap size wrong estimation (local) 45736617 45740923 303527 299221 NC_000014.9 velvet.60320 99.95 True fake: scaffold gap size wrong estimation (local) 45733978 45736279 306907 304606 NC_000014.9 velvet.60320 99.91 True fake: scaffold gap size wrong estimation (local) 45723860 45725386 318888 317362 NC_000014.9 velvet.60320 99.87 True fake: scaffold gap size wrong estimation (local) 45719558 45723535 323928 319951 NC_000014.9 velvet.60320 99.9 True fake: scaffold gap size wrong estimation (local) 45714159 45719309 330183 324957 NC_000014.9 velvet.60320 99.88 True fake: scaffold gap size wrong estimation (local) 45709307 45713849 335949 331308 NC_000014.9 velvet.60320 99.8 True fake: scaffold gap size wrong estimation (local) 45704142 45709086 342394 336788 NC_000014.9 velvet.60320 99.38 True fake: scaffold gap size wrong estimation (local) 45689855 45690541 353446 352731 NC_000014.9 velvet.60320 95.11 True fake: scaffold gap size wrong estimation (local) 45688544 45689676 354764 353606 NC_000014.9 velvet.60320 97.42 True fake: scaffold gap size wrong estimation (local) 45686059 45687503 357667 356223 NC_000014.9 velvet.60320 100.0 True fake: scaffold gap size wrong estimation (local) 45672647 45685778 371685 358510 NC_000014.9 velvet.60320 99.92 True relocation, scaffold gap is present, inconsistency = 13624121 32031675 32032454 388536 387757 NC_000014.9 velvet.60320 98.59 True fake: scaffold gap size wrong estimation (local) 32028318 32031567 393207 389958 NC_000014.9 velvet.60320 99.91 True fake: scaffold gap size wrong estimation (local) 32027102 32028069 394917 393950 NC_000014.9 velvet.60320 99.79 True fake: scaffold gap size wrong estimation (local) 32024508 32026817 398068 395760 NC_000014.9 velvet.60320 99.87 True relocation, scaffold gap is present, inconsistency = -13633223 45644968 45657720 411574 398079 NC_000014.9 velvet.60320 99.95 True relocation, scaffold gap is present, inconsistency = 13636547 32004193 32008410 416386 411585 NC_000014.9 velvet.60320 99.95 True fake: scaffold gap size wrong estimation (local) 32002526 32003928 418642 417240 NC_000014.9 velvet.60320 99.93 True fake: scaffold gap size wrong estimation (local) 32001627 32002251 419569 418945 NC_000014.9 velvet.60320 100.0 True fake: scaffold gap size wrong estimation (local) 32000354 32001534 421368 420188 NC_000014.9 velvet.60320 99.92 True relocation, scaffold gap is present, inconsistency = -20203 32008617 32013597 434016 428328 NC_000014.9 velvet.60320 99.9 True relocation, scaffold gap is present, inconsistency = -13630133 45627525 45628773 445241 443993 NC_000014.9 velvet.60320 99.92 True fake: scaffold gap size wrong estimation (local) 45620193 45627242 453127 446090 NC_000014.9 velvet.60320 99.76 True fake: scaffold gap size wrong estimation (local) 45618355 45619806 455650 454173 NC_000014.9 velvet.60320 97.97 True fake: scaffold gap size wrong estimation (local) 45614693 45618265 459370 455798 NC_000014.9 velvet.60320 99.94 True relocation, scaffold gap is present, inconsistency = 13636886 31969737 31977796 468234 459381 NC_000014.9 velvet.60320 99.79 True relocation, scaffold gap is present, inconsistency = -26567929 58536479 58537655 469422 468245 NC_000014.9 velvet.60320 99.92 True relocation, scaffold gap is present, inconsistency = 13015771 45517677 45520697 469433 472453 NC_000014.9 velvet.60320 99.97 True fake: scaffold gap size wrong estimation (local) 45520991 45525162 473362 477775 NC_000014.9 velvet.60320 99.98 True fake: scaffold gap size wrong estimation (local) 45551875 45554866 499636 502636 NC_000014.9 velvet.60320 99.93 True fake: scaffold gap size wrong estimation (local) 45554963 45559848 503552 508437 NC_000014.9 velvet.60320 99.88 True relocation, scaffold gap is present, inconsistency = 13607844 31940744 31944393 514812 511163 NC_000014.9 velvet.60320 100.0 True CONTIG velvet.60320 514812 misassembled CONTIG velvet.60335 7534 unaligned 27822781 27825067 3354 1 NC_000014.9 velvet.60342 98.6 True fake: scaffold gap size wrong estimation (local) 27812975 27819425 14244 7015 NC_000014.9 velvet.60342 99.92 True fake: scaffold gap size wrong estimation (local) 27810737 27812656 17244 15325 NC_000014.9 velvet.60342 99.84 True fake: scaffold gap size wrong estimation (local) 27809850 27810426 18326 17750 NC_000014.9 velvet.60342 100.0 True fake: scaffold gap size wrong estimation (local) 27806335 27809768 22478 19044 NC_000014.9 velvet.60342 99.91 True fake: scaffold gap size wrong estimation (local) 27805147 27805780 24191 23559 NC_000014.9 velvet.60342 99.84 True fake: scaffold gap size wrong estimation (local) 27796346 27797103 32214 31457 NC_000014.9 velvet.60342 99.87 True fake: scaffold gap size wrong estimation (local) 27793987 27796050 35020 32857 NC_000014.9 velvet.60342 100.0 True fake: scaffold gap size wrong estimation (local) 27779590 27793770 50135 35986 NC_000014.9 velvet.60342 99.73 True fake: scaffold gap size wrong estimation (local) 27775491 27779140 54992 51343 NC_000014.9 velvet.60342 100.0 True fake: scaffold gap size wrong estimation (local) 27771341 27775209 59923 56055 NC_000014.9 velvet.60342 99.92 True relocation, scaffold gap is present, inconsistency = 18738308 46514720 46517200 61126 63586 NC_000014.9 velvet.60342 98.99 True fake: scaffold gap size wrong estimation (local) 46517483 46520889 64644 68170 NC_000014.9 velvet.60342 99.73 True fake: scaffold gap size wrong estimation (local) 46520981 46529139 68992 77880 NC_000014.9 velvet.60342 99.54 True relocation, scaffold gap is present, inconsistency = 18753502 27765779 27767214 79580 78145 NC_000014.9 velvet.60342 100.0 True fake: scaffold gap size wrong estimation (local) 27753429 27765406 93087 80889 NC_000014.9 velvet.60342 98.75 True fake: scaffold gap size wrong estimation (local) 27751995 27753161 95089 93923 NC_000014.9 velvet.60342 99.91 True fake: scaffold gap size wrong estimation (local) 27745130 27751737 102708 95354 NC_000014.9 velvet.60342 99.82 True fake: scaffold gap size wrong estimation (local) 27741080 27744971 106824 102877 NC_000014.9 velvet.60342 99.87 True fake: scaffold gap size wrong estimation (local) 27735483 27740910 112991 107715 NC_000014.9 velvet.60342 97.01 True fake: scaffold gap size wrong estimation (local) 27732320 27735011 117182 114491 NC_000014.9 velvet.60342 99.93 True fake: scaffold gap size wrong estimation (local) 27718568 27731980 131716 118274 NC_000014.9 velvet.60342 99.69 True fake: scaffold gap size wrong estimation (local) 27717074 27718014 134170 133230 NC_000014.9 velvet.60342 99.89 True fake: scaffold gap size wrong estimation (local) 27707492 27714977 144417 136819 NC_000014.9 velvet.60342 99.37 True fake: scaffold gap size wrong estimation (local) 27703292 27707166 149313 145442 NC_000014.9 velvet.60342 99.87 True fake: scaffold gap size wrong estimation (local) 27702164 27703010 150839 149993 NC_000014.9 velvet.60342 99.88 True fake: scaffold gap size wrong estimation (local) 27683103 27701899 172128 151705 NC_000014.9 velvet.60342 99.88 True fake: scaffold gap size wrong estimation (local) 27681841 27682941 173958 172869 NC_000014.9 velvet.60342 98.63 True fake: scaffold gap size wrong estimation (local) 27679992 27681228 176434 175198 NC_000014.9 velvet.60342 99.92 True indel: indel (> 5bp) 27679338 27679991 177094 176441 NC_000014.9 velvet.60342 100.0 True fake: scaffold gap size wrong estimation (local) 27670435 27673112 180379 177702 NC_000014.9 velvet.60342 99.93 True fake: scaffold gap size wrong estimation (local) 27664871 27670272 187659 181347 NC_000014.9 velvet.60342 98.28 True fake: scaffold gap size wrong estimation (local) 27660782 27663762 192602 189642 NC_000014.9 velvet.60342 98.82 True fake: scaffold gap size wrong estimation (local) 27650194 27660659 204224 193593 NC_000014.9 velvet.60342 99.95 True fake: scaffold gap size wrong estimation (local) 27647682 27648752 207512 206442 NC_000014.9 velvet.60342 100.0 True fake: scaffold gap size wrong estimation (local) 27641169 27647485 215824 208588 NC_000014.9 velvet.60342 99.71 True fake: scaffold gap size wrong estimation (local) 27604399 27640931 253366 216780 NC_000014.9 velvet.60342 99.62 True relocation, scaffold gap is present, inconsistency = 6459580 21142023 21143445 256106 254740 NC_000014.9 velvet.60342 96.01 True fake: not a misassembly (possible transposable element) 89772716 89774463 258449 256710 NC_000014.9 velvet.60342 99.31 True fake: not a misassembly (possible transposable element) 21139606 21140616 259470 258460 NC_000014.9 velvet.60342 99.41 True relocation, scaffold gap is present, inconsistency = 2495952 23636579 23637582 259481 260484 NC_000014.9 velvet.60342 100.0 True fake: scaffold gap size wrong estimation (local) 23642716 23646009 261233 264526 NC_000014.9 velvet.60342 100.0 True fake: scaffold gap size wrong estimation (local) 23652750 23654314 266514 268078 NC_000014.9 velvet.60342 99.87 True fake: scaffold gap size wrong estimation (local) 23654711 23655490 268628 269407 NC_000014.9 velvet.60342 99.87 True relocation, scaffold gap is present, inconsistency = 3943542 27600685 27604019 274394 271060 NC_000014.9 velvet.60342 100.0 True fake: scaffold gap size wrong estimation (local) 27598544 27600409 277264 275399 NC_000014.9 velvet.60342 100.0 True fake: scaffold gap size wrong estimation (local) 27597038 27598303 279091 277826 NC_000014.9 velvet.60342 100.0 True fake: scaffold gap size wrong estimation (local) 27590141 27596307 287442 280461 NC_000014.9 velvet.60342 99.69 True fake: scaffold gap size wrong estimation (local) 27588756 27589881 288958 287833 NC_000014.9 velvet.60342 99.82 True fake: not a misassembly (possible transposable element) 23646056 23652476 288969 295389 NC_000014.9 velvet.60342 99.89 True fake: not a misassembly (possible transposable element) 27579906 27588483 304295 295539 NC_000014.9 velvet.60342 99.19 True fake: scaffold gap size wrong estimation (local) 27577183 27578969 307882 306132 NC_000014.9 velvet.60342 97.92 True relocation, scaffold gap is present, inconsistency = 3901558 23672624 23674747 308760 310883 NC_000014.9 velvet.60342 99.67 True fake: scaffold gap size wrong estimation (local) 23674840 23680662 313062 318884 NC_000014.9 velvet.60342 99.97 True fake: scaffold gap size wrong estimation (local) 23680807 23687265 319895 326353 NC_000014.9 velvet.60342 99.89 True fake: scaffold gap size wrong estimation (local) 23690175 23691359 329665 330826 NC_000014.9 velvet.60342 97.79 True relocation, scaffold gap is present, inconsistency = -19438 23671932 23672647 330837 331552 NC_000014.9 velvet.60342 99.58 True fake: scaffold gap size wrong estimation (local) 23691644 23692581 345640 346577 NC_000014.9 velvet.60342 99.89 True fake: scaffold gap size wrong estimation (local) 23692933 23704284 347789 359075 NC_000014.9 velvet.60342 99.32 True fake: scaffold gap size wrong estimation (local) 23704702 23705843 360137 361278 NC_000014.9 velvet.60342 100.0 True fake: scaffold gap size wrong estimation (local) 23723550 23730583 376812 384678 NC_000014.9 velvet.60342 99.69 True fake: scaffold gap size wrong estimation (local) 23730728 23735362 385617 390301 NC_000014.9 velvet.60342 98.25 True fake: scaffold gap size wrong estimation (local) 23737693 23738703 393469 394479 NC_000014.9 velvet.60342 99.9 True relocation, scaffold gap is present, inconsistency = 58807699 82546413 82553272 394490 401349 NC_000014.9 velvet.60342 99.8 True fake: scaffold gap size wrong estimation (local) 82553558 82558924 402106 407469 NC_000014.9 velvet.60342 99.76 True fake: scaffold gap size wrong estimation (local) 82559159 82569865 408197 419597 NC_000014.9 velvet.60342 99.5 True inversion, scaffold gap is present 82570423 82575766 424949 419608 NC_000014.9 velvet.60342 99.76 True relocation, scaffold gap is present, inconsistency = 6545035 76022227 76023992 428110 426345 NC_000014.9 velvet.60342 99.89 True fake: scaffold gap size wrong estimation (local) 76020244 76021967 430908 429185 NC_000014.9 velvet.60342 100.0 True inversion, scaffold gap is present 76010979 76016216 430919 436152 NC_000014.9 velvet.60342 99.85 True relocation, scaffold gap is present, inconsistency = 6560442 82577381 82600575 460793 436875 NC_000014.9 velvet.60342 99.83 True fake: scaffold gap size wrong estimation (local) 82576292 82577249 462685 461725 NC_000014.9 velvet.60342 99.79 True relocation, scaffold gap is present, inconsistency = 6558526 76016216 76017755 464233 462696 NC_000014.9 velvet.60342 99.87 True relocation, scaffold gap is present, inconsistency = 2542643 73472669 73473360 465137 464446 NC_000014.9 velvet.60342 98.55 True relocation, scaffold gap is present, inconsistency = -9133357 82601702 82605234 469513 465929 NC_000014.9 velvet.60342 97.93 True fake: scaffold gap size wrong estimation (local) 82600728 82601634 470539 469633 NC_000014.9 velvet.60342 100.0 True relocation, scaffold gap is present, inconsistency = 9129692 73465583 73469959 476106 471616 NC_000014.9 velvet.60342 99.95 True fake: not a misassembly (possible transposable element) 73453872 73456106 503737 501463 NC_000014.9 velvet.60342 99.86 True fake: not a misassembly (possible transposable element) 73434050 73435262 505291 504091 NC_000014.9 velvet.60342 99.0 True fake: scaffold gap size wrong estimation (local) 73431735 73432929 508497 507303 NC_000014.9 velvet.60342 100.0 True relocation, scaffold gap is present, inconsistency = 9341 73420582 73421207 509684 510309 NC_000014.9 velvet.60342 99.84 True fake: not a misassembly (possible transposable element) 73427434 73429078 515577 513935 NC_000014.9 velvet.60342 99.7 True fake: not a misassembly (possible transposable element) 73424123 73425826 515588 517359 NC_000014.9 velvet.60342 95.89 True fake: scaffold gap size wrong estimation (local) 73442244 73442904 528719 529379 NC_000014.9 velvet.60342 100.0 True fake: scaffold gap size wrong estimation (local) 73444882 73446012 532317 533419 NC_000014.9 velvet.60342 97.41 True fake: scaffold gap size wrong estimation (local) 73449990 73450540 539239 539789 NC_000014.9 velvet.60342 100.0 True local misassembly 73448100 73449749 542535 544188 NC_000014.9 velvet.60342 99.52 True fake: scaffold gap size wrong estimation (local) 73451597 73452178 546727 547308 NC_000014.9 velvet.60342 100.0 True fake: scaffold gap size wrong estimation (local) 73452393 73453156 547485 548248 NC_000014.9 velvet.60342 100.0 True relocation, scaffold gap is present, inconsistency = 23876 73477403 73478063 548619 549279 NC_000014.9 velvet.60342 100.0 True fake: scaffold gap size wrong estimation (local) 73478255 73478949 549347 550041 NC_000014.9 velvet.60342 99.86 True relocation, scaffold gap is present, inconsistency = 9119363 82605931 82606674 557660 558403 NC_000014.9 velvet.60342 100.0 True relocation, scaffold gap is present, inconsistency = -9133481 73474936 73475592 560146 560802 NC_000014.9 velvet.60342 100.0 True inversion, scaffold gap is present 73475885 73477028 561956 560813 NC_000014.9 velvet.60342 99.91 True relocation, scaffold gap is present, inconsistency = -9067495 82539262 82541611 566074 563725 NC_000014.9 velvet.60342 99.45 True fake: scaffold gap size wrong estimation (local) 82535030 82539071 571126 567085 NC_000014.9 velvet.60342 99.95 True fake: scaffold gap size wrong estimation (local) 82533926 82534824 572609 571711 NC_000014.9 velvet.60342 100.0 True fake: scaffold gap size wrong estimation (local) 82529427 82533767 577658 573322 NC_000014.9 velvet.60342 99.91 True relocation, scaffold gap is present, inconsistency = 73501 82607279 82618066 577669 588543 NC_000014.9 velvet.60342 99.14 True fake: scaffold gap size wrong estimation (local) 82618217 82621650 589463 592896 NC_000014.9 velvet.60342 100.0 True fake: scaffold gap size wrong estimation (local) 82622084 82624344 594156 596416 NC_000014.9 velvet.60342 100.0 True relocation, scaffold gap is present, inconsistency = -9121845 73502797 73504093 596714 598010 NC_000014.9 velvet.60342 100.0 True relocation, scaffold gap is present, inconsistency = -10036 73494787 73495505 598740 599457 NC_000014.9 velvet.60342 99.44 True fake: scaffold gap size wrong estimation (local) 73496132 73496959 600332 601159 NC_000014.9 velvet.60342 99.88 True relocation, scaffold gap is present, inconsistency = -11065 73487585 73488310 602850 603573 NC_000014.9 velvet.60342 99.31 True fake: scaffold gap size wrong estimation (local) 73488988 73490172 604358 605542 NC_000014.9 velvet.60342 99.92 True fake: scaffold gap size wrong estimation (local) 73490709 73493586 606882 609759 NC_000014.9 velvet.60342 99.9 True fake: scaffold gap size wrong estimation (local) 73493865 73494785 610608 611528 NC_000014.9 velvet.60342 99.89 True fake: scaffold gap size wrong estimation (local) 73497921 73499249 611539 612867 NC_000014.9 velvet.60342 100.0 True fake: scaffold gap size wrong estimation (local) 73500311 73501153 614979 615821 NC_000014.9 velvet.60342 100.0 True fake: scaffold gap size wrong estimation (local) 73511686 73513214 623552 625080 NC_000014.9 velvet.60342 100.0 True fake: scaffold gap size wrong estimation (local) 73513761 73514834 626038 627111 NC_000014.9 velvet.60342 100.0 True fake: scaffold gap size wrong estimation (local) 73516181 73517631 628655 630090 NC_000014.9 velvet.60342 98.96 True fake: scaffold gap size wrong estimation (local) 73518434 73519490 631327 632383 NC_000014.9 velvet.60342 99.05 True fake: scaffold gap size wrong estimation (local) 73519991 73524034 634179 638222 NC_000014.9 velvet.60342 99.88 True fake: scaffold gap size wrong estimation (local) 73524355 73525057 639237 639939 NC_000014.9 velvet.60342 100.0 True fake: scaffold gap size wrong estimation (local) 73525988 73527735 641323 643668 NC_000014.9 velvet.60342 99.36 True CONTIG velvet.60342 644510 misassembled 76327088 76327747 189 848 NC_000014.9 velvet.60345 99.85 True fake: scaffold gap size wrong estimation (local) 76328017 76332378 2130 6491 NC_000014.9 velvet.60345 99.91 True local misassembly 76338919 76344480 6492 12053 NC_000014.9 velvet.60345 99.77 True relocation, scaffold gap is present, inconsistency = 9483987 85830491 85834442 18027 14077 NC_000014.9 velvet.60345 99.8 True fake: scaffold gap size wrong estimation (local) 85827743 85828486 21447 20704 NC_000014.9 velvet.60345 99.73 True fake: scaffold gap size wrong estimation (local) 85791840 85799519 54470 46096 NC_000014.9 velvet.60345 99.91 True fake: scaffold gap size wrong estimation (local) 85784360 85791577 62192 54867 NC_000014.9 velvet.60345 99.86 True local misassembly 85775789 85784325 71770 62376 NC_000014.9 velvet.60345 98.34 True fake: scaffold gap size wrong estimation (local) 85772387 85775327 75928 72933 NC_000014.9 velvet.60345 99.97 True fake: scaffold gap size wrong estimation (local) 85768274 85772221 80879 76511 NC_000014.9 velvet.60345 99.95 True fake: scaffold gap size wrong estimation (local) 85764356 85768093 86218 81827 NC_000014.9 velvet.60345 99.56 True fake: scaffold gap size wrong estimation (local) 85762504 85764127 88427 86804 NC_000014.9 velvet.60345 99.94 True relocation, scaffold gap is present, inconsistency = 16209952 101974383 101975923 88731 90271 NC_000014.9 velvet.60345 100.0 True relocation, scaffold gap is present, inconsistency = -10086 101965848 101966422 90282 90856 NC_000014.9 velvet.60345 100.0 True relocation, scaffold gap is present, inconsistency = 18009 102002408 102003277 108833 109702 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 102004277 102006303 111314 113340 NC_000014.9 velvet.60345 100.0 True relocation, scaffold gap is present, inconsistency = -14897 101991417 101995353 113351 117287 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 101996895 101998152 119581 120838 NC_000014.9 velvet.60345 99.21 True local misassembly 101998341 101998878 120839 121376 NC_000014.9 velvet.60345 100.0 True relocation, scaffold gap is present, inconsistency = -8045625 93962357 93978106 130480 146233 NC_000014.9 velvet.60345 99.89 True fake: scaffold gap size wrong estimation (local) 94007110 94009513 171947 174350 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 94009683 94010288 174625 175230 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 94010505 94012543 176180 178319 NC_000014.9 velvet.60345 100.0 True relocation, scaffold gap is present, inconsistency = 1996387 96010788 96013001 182399 180177 NC_000014.9 velvet.60345 99.86 True relocation, scaffold gap is present, inconsistency = 59214429 36794769 36796348 183989 182410 NC_000014.9 velvet.60345 100.0 True relocation, scaffold gap is present, inconsistency = 57181760 93978137 93979772 184018 185653 NC_000014.9 velvet.60345 99.94 True relocation, scaffold gap is present, inconsistency = 2028998 96009004 96010068 186951 185887 NC_000014.9 velvet.60345 99.91 True relocation, scaffold gap is present, inconsistency = 1842470 94159166 94159724 193761 194320 NC_000014.9 velvet.60345 98.93 True fake: scaffold gap size wrong estimation (extensive) 94190627 94196174 217542 223987 NC_000014.9 velvet.60345 99.98 True fake: scaffold gap size wrong estimation (local) 94196618 94200527 225227 229189 NC_000014.9 velvet.60345 99.87 True fake: scaffold gap size wrong estimation (local) 94208888 94210132 233875 235119 NC_000014.9 velvet.60345 100.0 True relocation, scaffold gap is present, inconsistency = 1770494 95980637 95981627 236120 235130 NC_000014.9 velvet.60345 99.29 True fake: scaffold gap size wrong estimation (local) 95978833 95980512 238495 236816 NC_000014.9 velvet.60345 99.7 True relocation, scaffold gap is present, inconsistency = 25622595 70353787 70354828 240946 239905 NC_000014.9 velvet.60345 99.9 True fake: scaffold gap size wrong estimation (local) 70350400 70352167 245107 243340 NC_000014.9 velvet.60345 99.77 True fake: scaffold gap size wrong estimation (local) 70347145 70349411 249665 247399 NC_000014.9 velvet.60345 99.91 True fake: scaffold gap size wrong estimation (local) 70342407 70343809 251078 249676 NC_000014.9 velvet.60345 99.86 True fake: scaffold gap size wrong estimation (local) 70336203 70342162 258083 252124 NC_000014.9 velvet.60345 99.85 True relocation, scaffold gap is present, inconsistency = -10910 70344387 70347102 260789 258094 NC_000014.9 velvet.60345 99.11 True relocation, scaffold gap is present, inconsistency = 23666642 94014135 94018953 261180 265998 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 94019219 94031165 267034 278980 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 94031270 94032972 279768 281470 NC_000014.9 velvet.60345 100.0 True fake: not a misassembly (possible transposable element) 70302753 70304178 289628 288203 NC_000014.9 velvet.60345 99.72 True fake: not a misassembly (possible transposable element) 94053797 94059968 300402 306573 NC_000014.9 velvet.60345 99.95 True fake: scaffold gap size wrong estimation (local) 94063824 94065068 306733 307977 NC_000014.9 velvet.60345 99.92 True fake: scaffold gap size wrong estimation (local) 94065871 94066524 308796 309449 NC_000014.9 velvet.60345 98.32 True fake: scaffold gap size wrong estimation (local) 94067629 94068299 311757 312427 NC_000014.9 velvet.60345 99.4 True relocation, scaffold gap is present, inconsistency = 27756547 66304242 66308108 319244 315401 NC_000014.9 velvet.60345 99.4 True relocation, scaffold gap is present, inconsistency = 16402675 49892585 49899107 328300 321704 NC_000014.9 velvet.60345 99.94 True fake: scaffold gap size wrong estimation (local) 49890963 49891777 330668 329854 NC_000014.9 velvet.60345 99.88 True relocation, scaffold gap is present, inconsistency = 28526178 21361584 21362862 333931 332591 NC_000014.9 velvet.60345 95.15 True fake: not a misassembly (possible transposable element) 102071276 102072243 334655 335622 NC_000014.9 velvet.60345 99.9 True fake: not a misassembly (possible transposable element) 21360287 21361304 336650 335633 NC_000014.9 velvet.60345 99.8 True fake: scaffold gap size wrong estimation (local) 21357766 21358561 340565 339770 NC_000014.9 velvet.60345 98.74 True fake: scaffold gap size wrong estimation (local) 21356918 21357673 341789 341034 NC_000014.9 velvet.60345 100.0 True relocation, scaffold gap is present, inconsistency = 72664907 94033199 94035279 352408 354488 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 94035568 94049734 355492 370399 NC_000014.9 velvet.60345 99.91 True relocation, scaffold gap is present, inconsistency = 10164 94059988 94063671 370489 374172 NC_000014.9 velvet.60345 99.95 True relocation, scaffold gap is present, inconsistency = 23724390 70334468 70335587 375302 374183 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 70331273 70334239 379119 376229 NC_000014.9 velvet.60345 97.17 True fake: scaffold gap size wrong estimation (local) 70325688 70331059 386265 380111 NC_000014.9 velvet.60345 99.59 True fake: scaffold gap size wrong estimation (local) 70324728 70325296 387568 387000 NC_000014.9 velvet.60345 99.82 True fake: scaffold gap size wrong estimation (local) 70294504 70295543 418520 417480 NC_000014.9 velvet.60345 99.42 True fake: scaffold gap size wrong estimation (local) 70291074 70292484 422672 421262 NC_000014.9 velvet.60345 99.79 True fake: scaffold gap size wrong estimation (local) 70287100 70288385 426941 425656 NC_000014.9 velvet.60345 99.84 True fake: scaffold gap size wrong estimation (local) 70284119 70286964 430463 427618 NC_000014.9 velvet.60345 99.86 True relocation, scaffold gap is present, inconsistency = -13858 70289891 70291054 438549 437386 NC_000014.9 velvet.60345 99.83 True fake: scaffold gap size wrong estimation (local) 70288638 70289702 440276 439212 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 70261977 70262848 465855 464984 NC_000014.9 velvet.60345 95.07 True local misassembly 70261045 70261686 466497 465856 NC_000014.9 velvet.60345 99.69 True fake: scaffold gap size wrong estimation (local) 70258991 70260829 469554 467714 NC_000014.9 velvet.60345 99.78 True fake: scaffold gap size wrong estimation (local) 70258226 70258751 470295 469770 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 70256134 70258008 473125 471251 NC_000014.9 velvet.60345 99.68 True fake: scaffold gap size wrong estimation (local) 70254072 70254606 476135 475601 NC_000014.9 velvet.60345 99.63 True fake: scaffold gap size wrong estimation (local) 70252505 70253112 477866 477259 NC_000014.9 velvet.60345 99.51 True relocation, scaffold gap is present, inconsistency = 10816224 59432182 59432878 482049 481269 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 59430865 59432106 483301 482060 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 59429574 59430540 485231 484265 NC_000014.9 velvet.60345 99.79 True fake: scaffold gap size wrong estimation (local) 59426221 59429279 489073 486015 NC_000014.9 velvet.60345 99.93 True fake: scaffold gap size wrong estimation (local) 59397772 59400619 511185 508252 NC_000014.9 velvet.60345 96.76 True fake: scaffold gap size wrong estimation (local) 59396960 59397477 512764 512247 NC_000014.9 velvet.60345 99.81 True fake: scaffold gap size wrong estimation (local) 59394696 59396103 515162 513755 NC_000014.9 velvet.60345 99.93 True fake: scaffold gap size wrong estimation (local) 59391878 59394515 518832 516150 NC_000014.9 velvet.60345 100.0 True relocation, scaffold gap is present, inconsistency = -5803871 65194206 65195540 520375 519041 NC_000014.9 velvet.60345 100.0 True relocation, scaffold gap is present, inconsistency = -28100975 93292143 93295170 523413 520386 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 93291107 93291908 525081 524281 NC_000014.9 velvet.60345 99.88 True fake: scaffold gap size wrong estimation (local) 93287230 93289964 529421 526648 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 93283817 93286950 533727 530534 NC_000014.9 velvet.60345 99.97 True fake: scaffold gap size wrong estimation (local) 93282567 93283666 535767 534639 NC_000014.9 velvet.60345 99.9 True fake: scaffold gap size wrong estimation (local) 93281394 93282319 536994 536069 NC_000014.9 velvet.60345 100.0 True fake: not a misassembly (possible transposable element) 93655646 93656333 537692 537005 NC_000014.9 velvet.60345 100.0 True fake: not a misassembly (possible transposable element) 93261101 93262040 551992 551053 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 93256691 93258200 559323 557814 NC_000014.9 velvet.60345 99.47 True fake: scaffold gap size wrong estimation (local) 93255767 93256419 560203 559551 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 93254206 93255157 562405 561454 NC_000014.9 velvet.60345 100.0 True relocation, scaffold gap is present, inconsistency = 43351248 49901622 49902456 563741 562907 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 49899399 49900302 566735 565832 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 49892032 49892564 567299 566767 NC_000014.9 velvet.60345 100.0 True relocation, scaffold gap is present, inconsistency = 52176147 102068882 102069413 567470 568001 NC_000014.9 velvet.60345 100.0 True local misassembly 102069570 102070317 568002 568749 NC_000014.9 velvet.60345 98.53 True relocation, scaffold gap is present, inconsistency = 52159875 49909053 49909684 569391 568760 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 49906674 49908150 572744 571268 NC_000014.9 velvet.60345 99.12 True fake: not a misassembly (possible transposable element) 102063117 102064356 573962 575201 NC_000014.9 velvet.60345 100.0 True fake: not a misassembly (possible transposable element) 49873709 49874221 600823 600311 NC_000014.9 velvet.60345 98.05 True local misassembly 49872902 49873501 601423 600824 NC_000014.9 velvet.60345 99.83 True relocation, scaffold gap is present, inconsistency = 52223451 102097285 102098194 601756 602665 NC_000014.9 velvet.60345 99.89 True fake: scaffold gap size wrong estimation (local) 102098788 102099304 603153 603669 NC_000014.9 velvet.60345 100.0 True local misassembly 102099553 102100398 603670 604515 NC_000014.9 velvet.60345 98.58 True relocation, scaffold gap is present, inconsistency = 52229158 49869597 49870384 605313 604526 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 49868200 49869288 606889 605801 NC_000014.9 velvet.60345 99.91 True relocation, scaffold gap is present, inconsistency = 52231427 102100726 102102937 606900 609141 NC_000014.9 velvet.60345 98.57 True relocation, scaffold gap is present, inconsistency = 80730053 21368135 21370662 611679 609152 NC_000014.9 velvet.60345 99.92 True relocation, scaffold gap is present, inconsistency = -28538135 49888237 49888904 629712 629045 NC_000014.9 velvet.60345 98.5 True local misassembly 49887377 49887955 630291 629713 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 49885132 49885955 633314 632491 NC_000014.9 velvet.60345 98.67 True fake: scaffold gap size wrong estimation (local) 49883368 49884412 635891 634847 NC_000014.9 velvet.60345 99.9 True fake: scaffold gap size wrong estimation (local) 49880438 49882028 639471 637930 NC_000014.9 velvet.60345 96.9 True fake: scaffold gap size wrong estimation (local) 49876015 49876801 645988 645202 NC_000014.9 velvet.60345 99.62 True fake: not a misassembly (possible transposable element) 21333060 21333891 648192 647361 NC_000014.9 velvet.60345 100.0 True fake: not a misassembly (possible transposable element) 49867631 49868180 651938 651389 NC_000014.9 velvet.60345 99.82 True fake: scaffold gap size wrong estimation (local) 49864820 49866129 655715 654406 NC_000014.9 velvet.60345 99.62 True fake: scaffold gap size wrong estimation (local) 49862827 49864545 658327 656560 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 49861253 49862564 660497 659186 NC_000014.9 velvet.60345 99.92 True fake: scaffold gap size wrong estimation (local) 49860247 49860817 661540 660970 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 49857312 49858035 665576 664852 NC_000014.9 velvet.60345 99.72 True fake: scaffold gap size wrong estimation (local) 49855887 49856822 667260 666325 NC_000014.9 velvet.60345 99.89 True fake: scaffold gap size wrong estimation (local) 49853886 49855325 669651 668211 NC_000014.9 velvet.60345 99.86 True fake: scaffold gap size wrong estimation (local) 49851177 49853648 673066 670596 NC_000014.9 velvet.60345 99.76 True relocation, scaffold gap is present, inconsistency = -11934 49845382 49846916 690723 689261 NC_000014.9 velvet.60345 95.15 True fake: scaffold gap size wrong estimation (local) 49842949 49843534 693897 693312 NC_000014.9 velvet.60345 98.29 True fake: scaffold gap size wrong estimation (local) 49837250 49838571 695850 694487 NC_000014.9 velvet.60345 99.85 True fake: scaffold gap size wrong estimation (local) 49833232 49834189 700330 699374 NC_000014.9 velvet.60345 99.79 True fake: scaffold gap size wrong estimation (local) 49831552 49832314 702440 701643 NC_000014.9 velvet.60345 99.85 True fake: scaffold gap size wrong estimation (local) 49830460 49831435 703872 702937 NC_000014.9 velvet.60345 95.76 True fake: scaffold gap size wrong estimation (local) 49827815 49830412 707524 704927 NC_000014.9 velvet.60345 100.0 True relocation, scaffold gap is present, inconsistency = -8271 49835219 49836075 708391 707535 NC_000014.9 velvet.60345 99.77 True fake: scaffold gap size wrong estimation (extensive) 49824602 49827198 711403 708881 NC_000014.9 velvet.60345 95.45 True fake: scaffold gap size wrong estimation (local) 49818363 49819401 720511 719473 NC_000014.9 velvet.60345 99.9 True fake: scaffold gap size wrong estimation (local) 49817400 49818083 722605 721922 NC_000014.9 velvet.60345 98.25 True local misassembly 49815954 49817157 723809 722606 NC_000014.9 velvet.60345 99.42 True fake: scaffold gap size wrong estimation (local) 49814377 49815689 725942 724630 NC_000014.9 velvet.60345 99.92 True relocation, scaffold gap is present, inconsistency = -41731819 91543230 91544019 728905 728119 NC_000014.9 velvet.60345 99.1 True relocation, scaffold gap is present, inconsistency = -10480 91552128 91553527 730487 729088 NC_000014.9 velvet.60345 100.0 True relocation, scaffold gap is present, inconsistency = 66977758 24564068 24565386 739471 740773 NC_000014.9 velvet.60345 98.62 True fake: scaffold gap size wrong estimation (local) 24565643 24568871 741951 745179 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 24569160 24582859 746225 761682 NC_000014.9 velvet.60345 99.24 True fake: scaffold gap size wrong estimation (local) 24582986 24583767 762050 762831 NC_000014.9 velvet.60345 99.87 True fake: scaffold gap size wrong estimation (extensive) 24602558 24603092 772994 773528 NC_000014.9 velvet.60345 100.0 True relocation, scaffold gap is present, inconsistency = 46582168 71185271 71186929 773539 775197 NC_000014.9 velvet.60345 99.64 True fake: scaffold gap size wrong estimation (local) 71187190 71189148 776046 778004 NC_000014.9 velvet.60345 99.69 True fake: scaffold gap size wrong estimation (local) 71189417 71192576 778927 782092 NC_000014.9 velvet.60345 99.71 True fake: scaffold gap size wrong estimation (local) 71192846 71197648 783086 787888 NC_000014.9 velvet.60345 99.77 True fake: scaffold gap size wrong estimation (local) 71227234 71229372 815863 818001 NC_000014.9 velvet.60345 99.77 True relocation, scaffold gap is present, inconsistency = -49976 71183833 71184997 822438 823602 NC_000014.9 velvet.60345 99.83 True relocation, scaffold gap is present, inconsistency = 40180607 31000843 31001781 825952 825047 NC_000014.9 velvet.60345 96.23 True relocation, scaffold gap is present, inconsistency = -18755366 49754434 49756198 827727 825963 NC_000014.9 velvet.60345 99.89 True relocation, scaffold gap is present, inconsistency = -9378 49763042 49763801 828470 827738 NC_000014.9 velvet.60345 96.13 True fake: scaffold gap size wrong estimation (local) 49735983 49737580 861358 859761 NC_000014.9 velvet.60345 99.94 True fake: scaffold gap size wrong estimation (local) 49733682 49735868 864304 862119 NC_000014.9 velvet.60345 99.68 True fake: scaffold gap size wrong estimation (local) 49732436 49733412 866153 865176 NC_000014.9 velvet.60345 99.49 True fake: scaffold gap size wrong estimation (local) 49731591 49732154 867165 866602 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 49728142 49730209 871268 869201 NC_000014.9 velvet.60345 96.57 True fake: scaffold gap size wrong estimation (local) 49727255 49728051 873278 872482 NC_000014.9 velvet.60345 99.87 True fake: scaffold gap size wrong estimation (local) 49726059 49726973 874557 873588 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 49724935 49725858 876101 875178 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 49723508 49724809 878418 877117 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 49720250 49722124 882577 880711 NC_000014.9 velvet.60345 99.57 True relocation, scaffold gap is present, inconsistency = 9530570 40184498 40186477 885780 887738 NC_000014.9 velvet.60345 98.68 True fake: scaffold gap size wrong estimation (local) 40187307 40192773 889329 894795 NC_000014.9 velvet.60345 99.87 True fake: scaffold gap size wrong estimation (local) 40193054 40198689 895852 901426 NC_000014.9 velvet.60345 98.52 True fake: scaffold gap size wrong estimation (local) 40198953 40213171 902302 917851 NC_000014.9 velvet.60345 99.7 True fake: scaffold gap size wrong estimation (local) 40213495 40216456 918975 921936 NC_000014.9 velvet.60345 99.86 True fake: scaffold gap size wrong estimation (local) 40216800 40217815 922786 923801 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 40218102 40228520 924645 935833 NC_000014.9 velvet.60345 99.97 True fake: scaffold gap size wrong estimation (local) 40228753 40263522 936855 972033 NC_000014.9 velvet.60345 99.76 True fake: scaffold gap size wrong estimation (local) 40263775 40266031 973130 975386 NC_000014.9 velvet.60345 99.91 True fake: scaffold gap size wrong estimation (local) 40266922 40274226 976707 985110 NC_000014.9 velvet.60345 98.83 True fake: scaffold gap size wrong estimation (local) 40276191 40288715 990630 1004148 NC_000014.9 velvet.60345 97.92 True fake: scaffold gap size wrong estimation (local) 40307107 40307609 1019588 1020090 NC_000014.9 velvet.60345 98.21 True fake: scaffold gap size wrong estimation (local) 40307931 40317726 1021190 1031022 NC_000014.9 velvet.60345 99.34 True fake: scaffold gap size wrong estimation (local) 40317809 40320821 1031711 1034953 NC_000014.9 velvet.60345 97.93 True fake: scaffold gap size wrong estimation (local) 40323099 40326237 1038185 1041255 NC_000014.9 velvet.60345 97.79 True fake: scaffold gap size wrong estimation (local) 40354287 40356517 1065930 1068160 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 40356625 40358760 1069161 1071296 NC_000014.9 velvet.60345 100.0 True fake: scaffold gap size wrong estimation (local) 40359129 40360192 1072267 1073372 NC_000014.9 velvet.60345 99.29 True CONTIG velvet.60345 1073372 misassembled 76408628 76409992 316 1680 NC_000014.9 velvet.60357 100.0 True fake: scaffold gap size wrong estimation (local) 76410247 76410806 1817 2376 NC_000014.9 velvet.60357 100.0 True fake: scaffold gap size wrong estimation (local) 76411378 76413987 3856 6464 NC_000014.9 velvet.60357 99.89 True fake: scaffold gap size wrong estimation (local) 76414205 76415418 7357 8619 NC_000014.9 velvet.60357 100.0 True fake: scaffold gap size wrong estimation (local) 76417147 76417966 11030 11849 NC_000014.9 velvet.60357 98.78 True fake: scaffold gap size wrong estimation (local) 76439602 76440222 36722 37342 NC_000014.9 velvet.60357 98.07 True indel: indel (> 5bp) 76440237 76440798 37343 37904 NC_000014.9 velvet.60357 98.22 True relocation, scaffold gap is present, inconsistency = -9592 76431217 76432689 37915 39387 NC_000014.9 velvet.60357 100.0 True fake: scaffold gap size wrong estimation (local) 76432970 76433987 40161 41178 NC_000014.9 velvet.60357 100.0 True relocation, scaffold gap is present, inconsistency = 6754672 69676533 69677264 42943 42212 NC_000014.9 velvet.60357 99.73 True fake: scaffold gap size wrong estimation (local) 69647812 69652212 68141 63741 NC_000014.9 velvet.60357 100.0 True fake: scaffold gap size wrong estimation (local) 69646971 69647700 69565 68836 NC_000014.9 velvet.60357 99.86 True relocation, scaffold gap is present, inconsistency = 23084641 92735508 92736341 72732 73611 NC_000014.9 velvet.60357 100.0 True fake: scaffold gap size wrong estimation (local) 92770121 92771551 105991 107422 NC_000014.9 velvet.60357 99.93 True relocation, scaffold gap is present, inconsistency = 10659464 103433744 103435398 111805 110151 NC_000014.9 velvet.60357 99.94 True fake: scaffold gap size wrong estimation (local) 103425525 103426254 115101 114372 NC_000014.9 velvet.60357 99.86 True relocation, scaffold gap is present, inconsistency = -7362 103431563 103432813 116425 115175 NC_000014.9 velvet.60357 99.92 True fake: not a misassembly (possible transposable element) 103415151 103416557 118006 116600 NC_000014.9 velvet.60357 99.93 True fake: not a misassembly (possible transposable element) 103422422 103423191 118786 118017 NC_000014.9 velvet.60357 100.0 True local misassembly 103426275 103426874 119396 118797 NC_000014.9 velvet.60357 100.0 True fake: scaffold gap size wrong estimation (extensive) 103418043 103419002 120410 119407 NC_000014.9 velvet.60357 99.79 True fake: scaffold gap size wrong estimation (local) 103416753 103417784 121438 120421 NC_000014.9 velvet.60357 97.59 True fake: scaffold gap size wrong estimation (local) 103411955 103412860 127689 126784 NC_000014.9 velvet.60357 99.78 True fake: scaffold gap size wrong estimation (extensive) 103402547 103403317 129646 128876 NC_000014.9 velvet.60357 99.87 True relocation, scaffold gap is present, inconsistency = -7869 103408464 103409218 131598 130844 NC_000014.9 velvet.60357 99.87 True relocation, scaffold gap is present, inconsistency = -15229 103420340 103422199 134997 133092 NC_000014.9 velvet.60357 97.38 True fake: scaffold gap size wrong estimation (local) 103419256 103420231 136312 135337 NC_000014.9 velvet.60357 99.9 True relocation, scaffold gap is present, inconsistency = 13876 103403348 103405369 138344 136323 NC_000014.9 velvet.60357 99.9 True fake: scaffold gap size wrong estimation (local) 103377500 103380506 170920 167932 NC_000014.9 velvet.60357 99.24 True fake: scaffold gap size wrong estimation (local) 103376194 103376708 172866 172352 NC_000014.9 velvet.60357 99.81 True fake: scaffold gap size wrong estimation (local) 103373543 103374998 175551 174096 NC_000014.9 velvet.60357 98.01 True fake: scaffold gap size wrong estimation (local) 103340107 103345364 210751 205494 NC_000014.9 velvet.60357 99.94 True fake: scaffold gap size wrong estimation (local) 103334780 103339947 217711 211677 NC_000014.9 velvet.60357 99.57 True fake: scaffold gap size wrong estimation (local) 103316626 103317805 231241 230062 NC_000014.9 velvet.60357 99.92 True fake: scaffold gap size wrong estimation (local) 103315184 103316424 232719 231479 NC_000014.9 velvet.60357 100.0 True fake: scaffold gap size wrong estimation (local) 103313555 103314899 234997 233653 NC_000014.9 velvet.60357 100.0 True fake: scaffold gap size wrong estimation (local) 103310342 103312968 238959 236164 NC_000014.9 velvet.60357 99.88 True fake: scaffold gap size wrong estimation (local) 103308805 103310053 240923 239662 NC_000014.9 velvet.60357 99.83 True fake: scaffold gap size wrong estimation (local) 103307141 103308125 243772 242788 NC_000014.9 velvet.60357 99.8 True fake: scaffold gap size wrong estimation (local) 103305300 103306562 248126 246864 NC_000014.9 velvet.60357 99.76 True fake: scaffold gap size wrong estimation (local) 103304092 103305055 249340 248377 NC_000014.9 velvet.60357 99.48 True fake: scaffold gap size wrong estimation (local) 103302808 103303417 250951 250342 NC_000014.9 velvet.60357 99.84 True fake: scaffold gap size wrong estimation (local) 103300512 103302520 253876 251873 NC_000014.9 velvet.60357 99.7 True fake: scaffold gap size wrong estimation (local) 103297072 103297730 257651 256993 NC_000014.9 velvet.60357 100.0 True relocation, scaffold gap is present, inconsistency = 76950020 26317264 26320247 287439 284456 NC_000014.9 velvet.60357 98.83 True fake: scaffold gap size wrong estimation (local) 26315023 26317263 290610 288370 NC_000014.9 velvet.60357 99.51 True local misassembly 26303566 26308356 295401 290611 NC_000014.9 velvet.60357 99.58 True fake: scaffold gap size wrong estimation (local) 26302770 26303565 296255 295460 NC_000014.9 velvet.60357 99.87 True relocation, scaffold gap is present, inconsistency = 87048 26203690 26215711 296266 308920 NC_000014.9 velvet.60357 99.93 True fake: scaffold gap size wrong estimation (local) 26216624 26223128 310627 317131 NC_000014.9 velvet.60357 99.88 True fake: scaffold gap size wrong estimation (local) 26223404 26227641 318185 323224 NC_000014.9 velvet.60357 99.95 True fake: scaffold gap size wrong estimation (local) 26239288 26240564 331880 333156 NC_000014.9 velvet.60357 99.92 True local misassembly 26238433 26239034 333327 333928 NC_000014.9 velvet.60357 100.0 True fake: scaffold gap size wrong estimation (local) 26241000 26244608 336615 341127 NC_000014.9 velvet.60357 99.66 True fake: scaffold gap size wrong estimation (local) 26244858 26246598 341420 343200 NC_000014.9 velvet.60357 97.36 True fake: scaffold gap size wrong estimation (local) 26246894 26248343 344221 345673 NC_000014.9 velvet.60357 99.65 True fake: scaffold gap size wrong estimation (local) 26273158 26278115 370936 375805 NC_000014.9 velvet.60357 98.19 True relocation, scaffold gap is present, inconsistency = 14613162 40892634 40893858 377162 378416 NC_000014.9 velvet.60357 97.53 True relocation, scaffold gap is present, inconsistency = -14639780 26254089 26260116 378427 384454 NC_000014.9 velvet.60357 99.93 True fake: scaffold gap size wrong estimation (local) 26260375 26261275 384943 385843 NC_000014.9 velvet.60357 99.22 True fake: scaffold gap size wrong estimation (local) 26278410 26286187 402245 410114 NC_000014.9 velvet.60357 98.45 True fake: scaffold gap size wrong estimation (local) 26289831 26290873 414640 415682 NC_000014.9 velvet.60357 98.75 True fake: scaffold gap size wrong estimation (local) 26291413 26292079 417088 417754 NC_000014.9 velvet.60357 99.25 True fake: scaffold gap size wrong estimation (local) 26292572 26295758 420009 423260 NC_000014.9 velvet.60357 99.75 True fake: scaffold gap size wrong estimation (local) 26320606 26321242 441686 442322 NC_000014.9 velvet.60357 99.84 True fake: scaffold gap size wrong estimation (local) 26321536 26340634 442980 463271 NC_000014.9 velvet.60357 99.83 True fake: scaffold gap size wrong estimation (local) 26341274 26346198 464645 469746 NC_000014.9 velvet.60357 99.51 True fake: scaffold gap size wrong estimation (extensive) 26359946 26367694 473833 481581 NC_000014.9 velvet.60357 99.95 True relocation, scaffold gap is present, inconsistency = 76953366 103326231 103327415 486752 487880 NC_000014.9 velvet.60357 95.27 True fake: scaffold gap size wrong estimation (local) 103327668 103329404 488732 490468 NC_000014.9 velvet.60357 99.88 True fake: scaffold gap size wrong estimation (local) 103329698 103331046 491475 492823 NC_000014.9 velvet.60357 99.93 True relocation, scaffold gap is present, inconsistency = -41624 103289848 103293239 493249 496640 NC_000014.9 velvet.60357 99.85 True fake: scaffold gap size wrong estimation (local) 103293240 103294776 498494 500030 NC_000014.9 velvet.60357 99.93 True fake: scaffold gap size wrong estimation (local) 103294777 103295789 500599 501611 NC_000014.9 velvet.60357 99.8 True relocation, scaffold gap is present, inconsistency = -76922871 26372929 26378203 501622 507085 NC_000014.9 velvet.60357 96.53 True fake: scaffold gap size wrong estimation (local) 26378321 26382907 507968 512824 NC_000014.9 velvet.60357 99.8 True relocation, scaffold gap is present, inconsistency = 76924795 103322114 103323943 527236 529055 NC_000014.9 velvet.60357 99.45 True relocation, scaffold gap is present, inconsistency = 47995 103261724 103262599 541450 540575 NC_000014.9 velvet.60357 99.89 True fake: scaffold gap size wrong estimation (local) 103260099 103261495 543092 541696 NC_000014.9 velvet.60357 99.93 True relocation, scaffold gap is present, inconsistency = -11270 103269060 103270272 545401 544189 NC_000014.9 velvet.60357 99.92 True fake: scaffold gap size wrong estimation (local) 103267833 103268518 547983 547298 NC_000014.9 velvet.60357 98.25 True local misassembly 103266966 103267491 548509 547984 NC_000014.9 velvet.60357 98.1 True fake: scaffold gap size wrong estimation (local) 103265031 103265667 551712 551076 NC_000014.9 velvet.60357 98.43 True fake: scaffold gap size wrong estimation (local) 103262857 103264134 553324 552047 NC_000014.9 velvet.60357 99.22 True fake: scaffold gap size wrong estimation (local) 103259074 103259794 554292 553572 NC_000014.9 velvet.60357 95.42 True local misassembly 103257630 103258835 555498 554293 NC_000014.9 velvet.60357 97.43 True fake: scaffold gap size wrong estimation (local) 103256428 103257150 557846 557124 NC_000014.9 velvet.60357 98.2 True fake: scaffold gap size wrong estimation (local) 103253652 103254270 561642 561021 NC_000014.9 velvet.60357 99.36 True fake: scaffold gap size wrong estimation (local) 103251911 103252986 562981 561906 NC_000014.9 velvet.60357 99.91 True fake: scaffold gap size wrong estimation (local) 103249455 103251613 566451 564293 NC_000014.9 velvet.60357 99.58 True fake: scaffold gap size wrong estimation (local) 103248304 103249222 568673 567755 NC_000014.9 velvet.60357 99.67 True fake: scaffold gap size wrong estimation (local) 103246880 103247470 570130 569540 NC_000014.9 velvet.60357 99.83 True fake: scaffold gap size wrong estimation (local) 103245844 103246533 571747 571058 NC_000014.9 velvet.60357 99.86 True fake: scaffold gap size wrong estimation (local) 103243354 103244039 575026 574341 NC_000014.9 velvet.60357 98.4 True inversion, scaffold gap is present 103270558 103271370 601777 602589 NC_000014.9 velvet.60357 100.0 True relocation, scaffold gap is present, inconsistency = 62972 103203507 103207575 606714 602600 NC_000014.9 velvet.60357 98.76 True relocation, scaffold gap is present, inconsistency = 86279 103115611 103117039 606903 608340 NC_000014.9 velvet.60357 96.28 True fake: scaffold gap size wrong estimation (local) 103119718 103120354 611672 612308 NC_000014.9 velvet.60357 100.0 True relocation, scaffold gap is present, inconsistency = 36376948 66739522 66742759 615546 612319 NC_000014.9 velvet.60357 99.69 True fake: not a misassembly (possible transposable element) 103200485 103202462 617549 615571 NC_000014.9 velvet.60357 99.95 True fake: not a misassembly (possible transposable element) 66736626 66739204 620138 617560 NC_000014.9 velvet.60357 99.96 True relocation, scaffold gap is present, inconsistency = -36462785 103197915 103199400 621634 620149 NC_000014.9 velvet.60357 100.0 True local misassembly 103195891 103197069 622907 621729 NC_000014.9 velvet.60357 99.92 True local misassembly 103197268 103197841 623491 622918 NC_000014.9 velvet.60357 100.0 True fake: not a misassembly (possible transposable element) 103176831 103177834 631699 632702 NC_000014.9 velvet.60357 99.9 True fake: not a misassembly (possible transposable element) 103193152 103194039 633599 632713 NC_000014.9 velvet.60357 99.1 True fake: not a misassembly (possible transposable element) 66733122 66736399 635363 638640 NC_000014.9 velvet.60357 99.97 True fake: not a misassembly (possible transposable element) 103189674 103190415 639885 639139 NC_000014.9 velvet.60357 100.0 True relocation, scaffold gap is present, inconsistency = 28795 103155722 103156327 644437 645042 NC_000014.9 velvet.60357 100.0 True relocation, scaffold gap is present, inconsistency = 53724841 49406922 49414263 669001 661660 NC_000014.9 velvet.60357 99.92 True relocation, scaffold gap is present, inconsistency = -53756545 103159973 103160715 672494 671753 NC_000014.9 velvet.60357 99.6 True relocation, scaffold gap is present, inconsistency = 36456228 66699336 66700650 676903 675589 NC_000014.9 velvet.60357 100.0 True fake: scaffold gap size wrong estimation (local) 66697943 66699218 678290 677015 NC_000014.9 velvet.60357 100.0 True fake: scaffold gap size wrong estimation (local) 66695163 66697644 681865 679375 NC_000014.9 velvet.60357 99.96 True fake: scaffold gap size wrong estimation (local) 66691335 66694873 686508 682918 NC_000014.9 velvet.60357 100.0 True fake: scaffold gap size wrong estimation (local) 66688917 66691203 689611 687254 NC_000014.9 velvet.60357 95.09 True fake: scaffold gap size wrong estimation (local) 66687763 66688753 691527 690537 NC_000014.9 velvet.60357 100.0 True fake: scaffold gap size wrong estimation (local) 66654362 66664069 721846 712098 NC_000014.9 velvet.60357 99.14 True fake: scaffold gap size wrong estimation (local) 66651185 66654142 725632 722675 NC_000014.9 velvet.60357 99.9 True inversion, scaffold gap is present 66641686 66645457 731884 735655 NC_000014.9 velvet.60357 100.0 True inversion, scaffold gap is present 66650094 66651183 736755 735666 NC_000014.9 velvet.60357 100.0 True fake: scaffold gap size wrong estimation (local) 66649321 66650012 737630 736939 NC_000014.9 velvet.60357 100.0 True relocation, scaffold gap is present, inconsistency = 12201868 54431399 54437963 753684 747120 NC_000014.9 velvet.60357 100.0 True fake: not a misassembly (possible transposable element) 66666273 66666920 755325 755972 NC_000014.9 velvet.60357 99.85 True fake: not a misassembly (possible transposable element) 54429717 54430830 757096 755983 NC_000014.9 velvet.60357 100.0 True fake: scaffold gap size wrong estimation (local) 54423155 54429471 764224 757908 NC_000014.9 velvet.60357 100.0 True fake: scaffold gap size wrong estimation (local) 54422263 54422971 765751 765043 NC_000014.9 velvet.60357 100.0 True fake: scaffold gap size wrong estimation (local) 54421409 54422000 766660 766069 NC_000014.9 velvet.60357 100.0 True fake: scaffold gap size wrong estimation (local) 54412186 54414525 769010 766671 NC_000014.9 velvet.60357 99.96 True fake: scaffold gap size wrong estimation (local) 54411177 54412103 770693 769767 NC_000014.9 velvet.60357 100.0 True fake: scaffold gap size wrong estimation (local) 54409892 54410893 772052 771051 NC_000014.9 velvet.60357 100.0 True fake: scaffold gap size wrong estimation (local) 54408223 54409553 774323 772993 NC_000014.9 velvet.60357 99.25 True fake: scaffold gap size wrong estimation (local) 54394475 54396422 782434 780488 NC_000014.9 velvet.60357 99.9 True local misassembly 54396634 54397863 786021 784792 NC_000014.9 velvet.60357 100.0 True fake: scaffold gap size wrong estimation (local) 54391075 54392068 789876 788883 NC_000014.9 velvet.60357 100.0 True fake: scaffold gap size wrong estimation (local) 54390226 54390922 790998 790302 NC_000014.9 velvet.60357 100.0 True local misassembly 54392095 54392616 791530 791009 NC_000014.9 velvet.60357 100.0 True fake: scaffold gap size wrong estimation (local) 54384633 54389266 797745 793112 NC_000014.9 velvet.60357 100.0 True fake: scaffold gap size wrong estimation (local) 54378201 54379039 806675 805837 NC_000014.9 velvet.60357 100.0 True CONTIG velvet.60357 809236 misassembled 65154538 65155401 864 1 NC_000014.9 velvet.60358 98.73 True fake: scaffold gap size wrong estimation (local) 65152660 65153574 2769 1855 NC_000014.9 velvet.60358 99.89 True fake: scaffold gap size wrong estimation (extensive) 65113436 65114946 34383 32873 NC_000014.9 velvet.60358 100.0 True local misassembly 65115578 65116382 37162 36358 NC_000014.9 velvet.60358 99.88 True local misassembly 65117768 65119110 38515 37173 NC_000014.9 velvet.60358 99.93 True fake: not a misassembly (possible transposable element) 49850396 49850949 38526 39079 NC_000014.9 velvet.60358 99.82 True fake: not a misassembly (possible transposable element) 65110140 65110863 40051 39328 NC_000014.9 velvet.60358 100.0 True local misassembly 65112572 65113419 41925 41078 NC_000014.9 velvet.60358 98.47 True local misassembly 65111364 65112330 42892 41926 NC_000014.9 velvet.60358 100.0 True fake: scaffold gap size wrong estimation (local) 65106022 65107160 44041 42903 NC_000014.9 velvet.60358 98.77 True fake: scaffold gap size wrong estimation (local) 65104647 65105339 44908 44216 NC_000014.9 velvet.60358 99.86 True fake: scaffold gap size wrong estimation (local) 65102748 65103911 47967 46804 NC_000014.9 velvet.60358 99.83 True fake: scaffold gap size wrong estimation (local) 65100431 65101587 51184 50028 NC_000014.9 velvet.60358 98.96 True local misassembly 65099556 65100164 51793 51185 NC_000014.9 velvet.60358 100.0 True fake: scaffold gap size wrong estimation (local) 65065520 65066570 81033 79983 NC_000014.9 velvet.60358 100.0 True relocation, scaffold gap is present, inconsistency = 1058943 64004635 64006566 81044 82975 NC_000014.9 velvet.60358 100.0 True fake: scaffold gap size wrong estimation (local) 64006797 64007630 84331 85164 NC_000014.9 velvet.60358 100.0 True fake: scaffold gap size wrong estimation (local) 64015087 64017102 89673 91688 NC_000014.9 velvet.60358 100.0 True relocation, scaffold gap is present, inconsistency = -3334885 60683347 60683867 92818 93338 NC_000014.9 velvet.60358 100.0 True fake: scaffold gap size wrong estimation (local) 60684154 60685159 94981 95986 NC_000014.9 velvet.60358 100.0 True relocation, scaffold gap is present, inconsistency = 3333603 64019303 64020179 96527 97403 NC_000014.9 velvet.60358 100.0 True fake: scaffold gap size wrong estimation (local) 64020314 64022960 98207 100853 NC_000014.9 velvet.60358 100.0 True relocation, scaffold gap is present, inconsistency = -35340 63988247 63988952 101480 102185 NC_000014.9 velvet.60358 99.86 True fake: scaffold gap size wrong estimation (local) 63989951 63998620 103998 113501 NC_000014.9 velvet.60358 99.93 True fake: scaffold gap size wrong estimation (local) 63998863 64001443 114528 117108 NC_000014.9 velvet.60358 100.0 True fake: scaffold gap size wrong estimation (local) 64001536 64004098 117398 119960 NC_000014.9 velvet.60358 100.0 True relocation, scaffold gap is present, inconsistency = -3290551 60718042 60723785 124455 130198 NC_000014.9 velvet.60358 99.98 True relocation, scaffold gap is present, inconsistency = 13058679 73782477 73788167 130211 135899 NC_000014.9 velvet.60358 99.84 True relocation, scaffold gap is present, inconsistency = 37402633 36377737 36379833 138006 135910 NC_000014.9 velvet.60358 99.95 True relocation, scaffold gap is present, inconsistency = 2453204 33922807 33924522 139731 138017 NC_000014.9 velvet.60358 99.88 True local misassembly 33927413 33929366 141695 139742 NC_000014.9 velvet.60358 99.23 True local misassembly 33924942 33927148 143902 141696 NC_000014.9 velvet.60358 99.68 True fake: scaffold gap size wrong estimation (local) 33921858 33922662 147646 146842 NC_000014.9 velvet.60358 100.0 True relocation, scaffold gap is present, inconsistency = 23263 33878400 33879117 167124 167839 NC_000014.9 velvet.60358 99.72 True fake: not a misassembly (possible transposable element) 73822474 73824095 167850 169471 NC_000014.9 velvet.60358 99.94 True fake: not a misassembly (possible transposable element) 33879281 33883673 169482 173976 NC_000014.9 velvet.60358 99.98 True fake: scaffold gap size wrong estimation (local) 33883919 33887419 174591 178091 NC_000014.9 velvet.60358 100.0 True fake: scaffold gap size wrong estimation (local) 33887692 33893382 179138 184919 NC_000014.9 velvet.60358 99.95 True fake: not a misassembly (possible transposable element) 36339719 36341842 184930 187023 NC_000014.9 velvet.60358 98.45 True fake: not a misassembly (possible transposable element) 33921312 33921872 216644 217204 NC_000014.9 velvet.60358 100.0 True relocation, scaffold gap is present, inconsistency = 2451268 36373151 36377483 217215 221673 NC_000014.9 velvet.60358 99.72 True CONTIG velvet.60358 222648 misassembled 104211852 104214280 2429 1 NC_000014.9 velvet.60361 99.84 True fake: scaffold gap size wrong estimation (local) 104209458 104211563 5755 3613 NC_000014.9 velvet.60361 99.9 True fake: scaffold gap size wrong estimation (local) 104204972 104208048 11113 7969 NC_000014.9 velvet.60361 99.48 True fake: scaffold gap size wrong estimation (local) 104200569 104203679 16360 13250 NC_000014.9 velvet.60361 98.55 True fake: scaffold gap size wrong estimation (local) 104189864 104200568 27899 17195 NC_000014.9 velvet.60361 99.83 True local misassembly 104187124 104189658 30537 28003 NC_000014.9 velvet.60361 99.33 True fake: scaffold gap size wrong estimation (local) 104185875 104187123 36061 34813 NC_000014.9 velvet.60361 98.88 True indel: indel (> 5bp) 104184492 104185804 37374 36062 NC_000014.9 velvet.60361 100.0 True indel: indel (> 5bp) 104183559 104184476 38292 37375 NC_000014.9 velvet.60361 99.89 True fake: scaffold gap size wrong estimation (local) 104177989 104180166 40480 38303 NC_000014.9 velvet.60361 99.86 True fake: scaffold gap size wrong estimation (local) 104165744 104175705 53182 43221 NC_000014.9 velvet.60361 99.94 True fake: scaffold gap size wrong estimation (local) 104153741 104159645 59935 53953 NC_000014.9 velvet.60361 99.83 True fake: scaffold gap size wrong estimation (local) 104139192 104153434 75618 61558 NC_000014.9 velvet.60361 98.6 True relocation, scaffold gap is present, inconsistency = -27370 104159654 104165171 82526 77009 NC_000014.9 velvet.60361 99.66 True fake: scaffold gap size wrong estimation (local) 104132978 104136284 107965 104608 NC_000014.9 velvet.60361 99.97 True fake: scaffold gap size wrong estimation (local) 104129326 104132699 112434 109058 NC_000014.9 velvet.60361 98.82 True fake: scaffold gap size wrong estimation (local) 104128316 104129020 114105 113401 NC_000014.9 velvet.60361 100.0 True relocation, scaffold gap is present, inconsistency = 64022651 40101995 40103175 116595 117775 NC_000014.9 velvet.60361 100.0 True relocation, scaffold gap is present, inconsistency = -15793 40090455 40095922 120848 127483 NC_000014.9 velvet.60361 99.54 True fake: scaffold gap size wrong estimation (local) 40096566 40100710 128607 133182 NC_000014.9 velvet.60361 99.85 True fake: scaffold gap size wrong estimation (local) 40100836 40101716 134076 134983 NC_000014.9 velvet.60361 96.37 True fake: scaffold gap size wrong estimation (local) 40105849 40109023 144378 147552 NC_000014.9 velvet.60361 99.91 True fake: scaffold gap size wrong estimation (local) 40109314 40112772 148470 152887 NC_000014.9 velvet.60361 99.71 True fake: scaffold gap size wrong estimation (local) 40113060 40114402 154341 155683 NC_000014.9 velvet.60361 99.78 True fake: scaffold gap size wrong estimation (local) 40126111 40127454 163708 165051 NC_000014.9 velvet.60361 99.63 True fake: scaffold gap size wrong estimation (local) 40128295 40140611 166770 180824 NC_000014.9 velvet.60361 99.75 True relocation, inconsistency = 7838 40148469 40156090 180844 188476 NC_000014.9 velvet.60361 99.65 True fake: scaffold gap size wrong estimation (local) 40157002 40157524 189549 190071 NC_000014.9 velvet.60361 98.28 True indel: indel (> 5bp) 40157585 40158787 190176 191379 NC_000014.9 velvet.60361 99.83 True fake: scaffold gap size wrong estimation (local) 40160893 40161523 194126 194756 NC_000014.9 velvet.60361 99.52 True fake: scaffold gap size wrong estimation (local) 40163344 40163914 196754 197372 NC_000014.9 velvet.60361 99.82 True fake: scaffold gap size wrong estimation (local) 40163918 40173694 198509 209122 NC_000014.9 velvet.60361 99.66 True fake: scaffold gap size wrong estimation (local) 40176103 40184361 212454 222230 NC_000014.9 velvet.60361 99.73 True CONTIG velvet.60361 222230 misassembled 31012065 31012617 4071 3519 NC_000014.9 velvet.60374 100.0 True relocation, scaffold gap is present, inconsistency = 57436 30949715 30951370 7330 8985 NC_000014.9 velvet.60374 99.94 True fake: scaffold gap size wrong estimation (local) 30953929 30956917 12900 16159 NC_000014.9 velvet.60374 99.83 True fake: scaffold gap size wrong estimation (local) 30957482 30960614 17513 20698 NC_000014.9 velvet.60374 97.93 True fake: scaffold gap size wrong estimation (local) 30960898 30963464 21085 24057 NC_000014.9 velvet.60374 99.92 True fake: scaffold gap size wrong estimation (local) 30964941 30965572 25861 26492 NC_000014.9 velvet.60374 98.26 True fake: scaffold gap size wrong estimation (local) 30965881 30968054 27036 29210 NC_000014.9 velvet.60374 99.54 True relocation, scaffold gap is present, inconsistency = 15458 30983523 30984105 29803 29221 NC_000014.9 velvet.60374 97.94 True local misassembly 30982479 30983268 30593 29804 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 30980655 30981180 34279 33754 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 30979028 30979589 37183 36622 NC_000014.9 velvet.60374 98.22 True local misassembly 30977797 30978800 38187 37184 NC_000014.9 velvet.60374 99.6 True fake: scaffold gap size wrong estimation (local) 30975837 30976818 41206 40225 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 30973266 30974592 44837 43511 NC_000014.9 velvet.60374 99.85 True fake: scaffold gap size wrong estimation (local) 30971238 30971909 47798 47127 NC_000014.9 velvet.60374 98.51 True local misassembly 30970417 30971237 49264 48444 NC_000014.9 velvet.60374 99.27 True relocation, scaffold gap is present, inconsistency = 8064419 22900816 22902782 52480 54501 NC_000014.9 velvet.60374 99.74 True fake: scaffold gap size wrong estimation (local) 22903085 22904412 55226 56553 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 22904595 22906783 57402 59840 NC_000014.9 velvet.60374 99.86 True fake: scaffold gap size wrong estimation (local) 22907374 22907953 60712 61291 NC_000014.9 velvet.60374 99.83 True fake: scaffold gap size wrong estimation (local) 22909247 22909898 63050 63701 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 22911045 22911640 65967 66562 NC_000014.9 velvet.60374 100.0 True local misassembly 22911925 22912735 66563 67373 NC_000014.9 velvet.60374 98.52 True relocation, scaffold gap is present, inconsistency = 8022519 30943562 30944255 76374 75681 NC_000014.9 velvet.60374 99.71 True local misassembly 30941900 30943539 78199 76560 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 30934311 30941656 87399 79189 NC_000014.9 velvet.60374 99.48 True fake: scaffold gap size wrong estimation (local) 30933281 30934042 88844 88083 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 30932256 30932991 89957 89221 NC_000014.9 velvet.60374 99.46 True fake: scaffold gap size wrong estimation (local) 30929970 30931993 92610 90587 NC_000014.9 velvet.60374 99.75 True fake: scaffold gap size wrong estimation (extensive) 30918525 30922065 96237 92621 NC_000014.9 velvet.60374 97.11 True fake: scaffold gap size wrong estimation (local) 30916686 30918228 98699 97157 NC_000014.9 velvet.60374 99.87 True relocation, scaffold gap is present, inconsistency = 5820092 25090009 25096047 99246 105448 NC_000014.9 velvet.60374 97.16 True relocation, scaffold gap is present, inconsistency = 51135814 76232459 76233885 106046 107472 NC_000014.9 velvet.60374 99.79 True fake: scaffold gap size wrong estimation (local) 76234101 76234914 107859 108672 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 76235511 76237099 110026 111614 NC_000014.9 velvet.60374 99.24 True fake: scaffold gap size wrong estimation (local) 76237326 76238314 112503 113491 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 76238433 76239923 113828 115375 NC_000014.9 velvet.60374 95.68 True fake: scaffold gap size wrong estimation (local) 76243217 76244270 115386 116439 NC_000014.9 velvet.60374 100.0 True local misassembly 76240415 76241624 116543 117805 NC_000014.9 velvet.60374 95.25 True relocation, scaffold gap is present, inconsistency = 45324139 30914626 30916265 119454 117816 NC_000014.9 velvet.60374 99.7 True fake: scaffold gap size wrong estimation (local) 30909419 30914375 126019 120331 NC_000014.9 velvet.60374 98.76 True fake: scaffold gap size wrong estimation (local) 30904116 30909232 132255 126836 NC_000014.9 velvet.60374 99.94 True fake: scaffold gap size wrong estimation (local) 30903590 30904113 134300 133777 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 30902185 30903429 136549 135305 NC_000014.9 velvet.60374 99.92 True fake: scaffold gap size wrong estimation (local) 30901278 30901885 137340 136733 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 30897569 30900075 141857 139351 NC_000014.9 velvet.60374 99.88 True fake: scaffold gap size wrong estimation (local) 30895095 30897315 145143 142923 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 30893414 30894887 147500 146027 NC_000014.9 velvet.60374 99.93 True fake: scaffold gap size wrong estimation (local) 30891008 30892521 150469 148961 NC_000014.9 velvet.60374 99.6 True fake: scaffold gap size wrong estimation (local) 30887383 30888517 154556 153431 NC_000014.9 velvet.60374 99.11 True fake: scaffold gap size wrong estimation (extensive) 30875611 30876879 158014 156746 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 30872295 30874201 162170 160280 NC_000014.9 velvet.60374 99.1 True relocation, scaffold gap is present, inconsistency = -18470 30888794 30890754 164141 162181 NC_000014.9 velvet.60374 99.85 True fake: scaffold gap size wrong estimation (local) 30882401 30886751 171293 166943 NC_000014.9 velvet.60374 99.95 True fake: scaffold gap size wrong estimation (local) 30876977 30878386 177971 176562 NC_000014.9 velvet.60374 99.86 True fake: scaffold gap size wrong estimation (local) 30860965 30862531 193173 191607 NC_000014.9 velvet.60374 99.87 True relocation, scaffold gap is present, inconsistency = -7081 30862723 30868035 199218 193184 NC_000014.9 velvet.60374 99.75 True relocation, scaffold gap is present, inconsistency = -41280532 72141893 72143244 200644 199229 NC_000014.9 velvet.60374 99.7 True relocation, scaffold gap is present, inconsistency = 41275841 30851302 30852246 214450 215394 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 30852528 30853083 215735 216290 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 30853359 30856415 217378 220435 NC_000014.9 velvet.60374 99.97 True fake: scaffold gap size wrong estimation (local) 30857022 30858614 221805 223397 NC_000014.9 velvet.60374 99.87 True fake: scaffold gap size wrong estimation (local) 30858903 30860891 224289 226277 NC_000014.9 velvet.60374 99.75 True relocation, scaffold gap is present, inconsistency = 21703 30836583 30837189 226879 226288 NC_000014.9 velvet.60374 97.36 True fake: scaffold gap size wrong estimation (local) 30831140 30833286 234177 232031 NC_000014.9 velvet.60374 99.91 True fake: scaffold gap size wrong estimation (local) 30829354 30830875 236839 235350 NC_000014.9 velvet.60374 97.88 True fake: scaffold gap size wrong estimation (local) 30828320 30828840 238074 237554 NC_000014.9 velvet.60374 99.81 True fake: scaffold gap size wrong estimation (local) 30825555 30827570 241729 239681 NC_000014.9 velvet.60374 98.34 True fake: scaffold gap size wrong estimation (local) 30823795 30825391 244299 242724 NC_000014.9 velvet.60374 98.55 True fake: scaffold gap size wrong estimation (extensive) 30808340 30810249 252501 250592 NC_000014.9 velvet.60374 99.9 True fake: scaffold gap size wrong estimation (local) 30795116 30808042 267076 253192 NC_000014.9 velvet.60374 99.92 True fake: scaffold gap size wrong estimation (local) 30794112 30794969 268536 267679 NC_000014.9 velvet.60374 99.88 True fake: scaffold gap size wrong estimation (local) 30792119 30793717 270650 269052 NC_000014.9 velvet.60374 99.12 True local misassembly 30791099 30791865 271417 270651 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 30790075 30790970 273382 272487 NC_000014.9 velvet.60374 99.22 True fake: scaffold gap size wrong estimation (local) 30788606 30790055 276047 274598 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 30786329 30787794 279005 277541 NC_000014.9 velvet.60374 99.86 True fake: scaffold gap size wrong estimation (local) 30778304 30785820 288481 280215 NC_000014.9 velvet.60374 99.87 True fake: scaffold gap size wrong estimation (local) 30775954 30777307 291595 290242 NC_000014.9 velvet.60374 98.97 True fake: scaffold gap size wrong estimation (local) 30768437 30775747 300131 292661 NC_000014.9 velvet.60374 99.89 True fake: scaffold gap size wrong estimation (local) 30765807 30768131 303510 301187 NC_000014.9 velvet.60374 99.74 True fake: scaffold gap size wrong estimation (local) 30758950 30760224 306427 305150 NC_000014.9 velvet.60374 99.77 True local misassembly 30763487 30765643 308584 306438 NC_000014.9 velvet.60374 99.3 True fake: scaffold gap size wrong estimation (local) 30760516 30763231 312291 309576 NC_000014.9 velvet.60374 99.74 True fake: scaffold gap size wrong estimation (local) 30758084 30758653 315445 314877 NC_000014.9 velvet.60374 99.47 True fake: scaffold gap size wrong estimation (local) 30756394 30757848 317051 315597 NC_000014.9 velvet.60374 99.59 True fake: scaffold gap size wrong estimation (local) 30750541 30756183 324625 318135 NC_000014.9 velvet.60374 99.8 True fake: scaffold gap size wrong estimation (local) 30746056 30750266 329763 325553 NC_000014.9 velvet.60374 99.93 True fake: scaffold gap size wrong estimation (local) 30743146 30744189 333360 332317 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 30733282 30737174 337417 333371 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 30732058 30732999 339480 338539 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 30729030 30729850 343420 342600 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 30724515 30728786 348839 344492 NC_000014.9 velvet.60374 97.57 True relocation, scaffold gap is present, inconsistency = -18510 30739607 30743014 352321 348850 NC_000014.9 velvet.60374 99.88 True fake: scaffold gap size wrong estimation (local) 30737440 30739409 354948 352999 NC_000014.9 velvet.60374 98.57 True relocation, scaffold gap is present, inconsistency = 35517942 66258041 66277795 355638 375392 NC_000014.9 velvet.60374 99.98 True relocation, scaffold gap is present, inconsistency = 30269768 35983941 35987745 379724 375920 NC_000014.9 velvet.60374 100.0 True relocation, scaffold gap is present, inconsistency = -10153 35990549 35994083 383269 379735 NC_000014.9 velvet.60374 100.0 True relocation, scaffold gap is present, inconsistency = 9263867 26724682 26725253 385269 384698 NC_000014.9 velvet.60374 99.83 True relocation, inconsistency = -55167167 81890626 81891584 386492 385534 NC_000014.9 velvet.60374 100.0 True relocation, scaffold gap is present, inconsistency = 12155620 69732994 69734995 386503 388504 NC_000014.9 velvet.60374 100.0 True relocation, scaffold gap is present, inconsistency = 17330143 87065149 87067768 388515 391133 NC_000014.9 velvet.60374 99.92 True relocation, scaffold gap is present, inconsistency = 51074702 35989796 35990436 391784 391144 NC_000014.9 velvet.60374 100.0 True relocation, scaffold gap is present, inconsistency = 30292933 66283380 66286170 391795 394585 NC_000014.9 velvet.60374 100.0 True fake: not a misassembly (possible transposable element) 87067969 87069424 394596 396001 NC_000014.9 velvet.60374 96.5 True fake: not a misassembly (possible transposable element) 66286382 66287661 396012 397291 NC_000014.9 velvet.60374 100.0 True relocation, scaffold gap is present, inconsistency = 30296721 35988413 35989650 398539 397302 NC_000014.9 velvet.60374 100.0 True relocation, scaffold gap is present, inconsistency = -14500 35995751 36002651 406819 398801 NC_000014.9 velvet.60374 99.99 True fake: scaffold gap size wrong estimation (local) 35994316 35995038 407876 407154 NC_000014.9 velvet.60374 100.0 True relocation, scaffold gap is present, inconsistency = 25421 35949796 35951350 426975 425421 NC_000014.9 velvet.60374 99.87 True fake: scaffold gap size wrong estimation (local) 35946551 35947557 431224 430218 NC_000014.9 velvet.60374 99.01 True local misassembly 35945406 35946285 432104 431225 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 35944317 35945334 433900 432883 NC_000014.9 velvet.60374 100.0 True relocation, scaffold gap is present, inconsistency = 33812125 69757470 69758019 433911 434460 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (extensive) 69765473 69766195 434471 435193 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 69766466 69772372 436317 442223 NC_000014.9 velvet.60374 99.92 True relocation, scaffold gap is present, inconsistency = -10771 69761612 69762349 442234 442971 NC_000014.9 velvet.60374 99.86 True relocation, scaffold gap is present, inconsistency = -8881 69753881 69755008 443384 444511 NC_000014.9 velvet.60374 99.82 True fake: scaffold gap size wrong estimation (extensive) 69763816 69764727 445400 446350 NC_000014.9 velvet.60374 95.18 True local misassembly 69762794 69763651 446442 447299 NC_000014.9 velvet.60374 99.88 True fake: scaffold gap size wrong estimation (local) 69772621 69773889 451597 452866 NC_000014.9 velvet.60374 99.45 True fake: scaffold gap size wrong estimation (local) 69774103 69774700 453006 453600 NC_000014.9 velvet.60374 99.33 True fake: scaffold gap size wrong estimation (local) 69774976 69779154 454720 459681 NC_000014.9 velvet.60374 99.9 True relocation, scaffold gap is present, inconsistency = -100361 69678804 69679531 459692 460419 NC_000014.9 velvet.60374 99.86 True fake: scaffold gap size wrong estimation (local) 69679700 69686745 461424 468588 NC_000014.9 velvet.60374 99.48 True fake: scaffold gap size wrong estimation (local) 69687414 69691084 469736 473404 NC_000014.9 velvet.60374 99.86 True relocation, scaffold gap is present, inconsistency = 16133353 85824448 85826697 475664 473415 NC_000014.9 velvet.60374 100.0 True relocation, scaffold gap is present, inconsistency = 16092071 69715886 69717370 490671 492155 NC_000014.9 velvet.60374 99.87 True fake: scaffold gap size wrong estimation (local) 69717614 69718799 493080 494243 NC_000014.9 velvet.60374 98.04 True fake: scaffold gap size wrong estimation (local) 69718904 69720519 494700 496315 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 69720807 69721575 497099 497867 NC_000014.9 velvet.60374 100.0 True relocation, scaffold gap is present, inconsistency = -5511979 64211251 64215570 499522 503895 NC_000014.9 velvet.60374 99.91 True relocation, scaffold gap is present, inconsistency = 12188411 76403992 76405150 505112 503906 NC_000014.9 velvet.60374 99.73 True fake: scaffold gap size wrong estimation (local) 76396184 76403729 513859 505312 NC_000014.9 velvet.60374 99.48 True fake: scaffold gap size wrong estimation (local) 76393979 76395998 516803 514785 NC_000014.9 velvet.60374 99.8 True fake: scaffold gap size wrong estimation (local) 76390437 76393807 521073 517703 NC_000014.9 velvet.60374 99.94 True fake: scaffold gap size wrong estimation (local) 76388458 76390205 523868 522121 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 76372789 76385197 537468 525059 NC_000014.9 velvet.60374 99.98 True relocation, scaffold gap is present, inconsistency = -18579604 94949667 94952382 540253 537479 NC_000014.9 velvet.60374 99.89 True fake: scaffold gap size wrong estimation (local) 94945616 94948891 545024 541749 NC_000014.9 velvet.60374 99.88 True fake: scaffold gap size wrong estimation (local) 94941259 94942225 546001 545035 NC_000014.9 velvet.60374 100.0 True local misassembly 94942389 94945459 549082 546012 NC_000014.9 velvet.60374 99.9 True fake: scaffold gap size wrong estimation (local) 94910240 94911734 578477 576983 NC_000014.9 velvet.60374 100.0 True local misassembly 94911795 94913617 580311 578488 NC_000014.9 velvet.60374 99.84 True local misassembly 94916312 94917618 581631 580325 NC_000014.9 velvet.60374 99.92 True relocation, scaffold gap is present, inconsistency = 25158937 69755296 69757220 581786 583710 NC_000014.9 velvet.60374 99.9 True relocation, scaffold gap is present, inconsistency = -30524316 39232915 39234537 583721 585343 NC_000014.9 velvet.60374 99.88 True fake: not a misassembly (possible transposable element) 94913961 94915619 587012 585354 NC_000014.9 velvet.60374 99.94 True fake: not a misassembly (possible transposable element) 39234541 39235074 587294 587827 NC_000014.9 velvet.60374 100.0 True fake: not a misassembly (possible transposable element) 67534476 67535339 588743 589606 NC_000014.9 velvet.60374 99.88 True fake: not a misassembly (possible transposable element) 39235702 39237252 589617 591167 NC_000014.9 velvet.60374 99.94 True relocation, scaffold gap is present, inconsistency = 30488105 69749076 69749577 614886 615387 NC_000014.9 velvet.60374 100.0 True relocation, scaffold gap is present, inconsistency = 186470 69556702 69558068 621291 619925 NC_000014.9 velvet.60374 99.27 True fake: not a misassembly (possible transposable element) 21178003 21178782 621833 622612 NC_000014.9 velvet.60374 99.87 True fake: not a misassembly (possible transposable element) 69554549 69555056 624280 623773 NC_000014.9 velvet.60374 99.8 True relocation, scaffold gap is present, inconsistency = 48374215 21179606 21180323 624291 625008 NC_000014.9 velvet.60374 99.86 True fake: scaffold gap size wrong estimation (local) 21181499 21182035 627180 627716 NC_000014.9 velvet.60374 97.77 True relocation, scaffold gap is present, inconsistency = 55204638 76386684 76388162 629205 627727 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 76385215 76386454 631034 629795 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 76370381 76372556 639711 637537 NC_000014.9 velvet.60374 99.95 True fake: scaffold gap size wrong estimation (local) 76369542 76370107 641236 640671 NC_000014.9 velvet.60374 99.82 True fake: scaffold gap size wrong estimation (local) 76368244 76368915 642545 641874 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 76364672 76365338 645034 644368 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 76358397 76364402 651925 645920 NC_000014.9 velvet.60374 100.0 True fake: not a misassembly (possible transposable element) 76365409 76367312 651936 653839 NC_000014.9 velvet.60374 100.0 True fake: not a misassembly (possible transposable element) 76354982 76358019 657791 654756 NC_000014.9 velvet.60374 99.87 True fake: scaffold gap size wrong estimation (local) 76353751 76354696 659771 658824 NC_000014.9 velvet.60374 99.58 True fake: scaffold gap size wrong estimation (local) 76351971 76353667 661623 659927 NC_000014.9 velvet.60374 99.12 True fake: scaffold gap size wrong estimation (local) 76347449 76351970 666256 661735 NC_000014.9 velvet.60374 99.89 True indel: indel (<= 5bp) 76345673 76347446 668030 666257 NC_000014.9 velvet.60374 99.32 True relocation, inconsistency = 7013 76333592 76338659 673098 668031 NC_000014.9 velvet.60374 99.92 True relocation, scaffold gap is present, inconsistency = 9460891 85799561 85800718 673109 674266 NC_000014.9 velvet.60374 99.65 True fake: scaffold gap size wrong estimation (local) 85800917 85804835 675284 679252 NC_000014.9 velvet.60374 99.8 True fake: scaffold gap size wrong estimation (local) 85805535 85806671 680486 681622 NC_000014.9 velvet.60374 99.03 True local misassembly 85806818 85807510 681623 682315 NC_000014.9 velvet.60374 97.4 True fake: scaffold gap size wrong estimation (local) 85808850 85810184 684364 685694 NC_000014.9 velvet.60374 99.55 True relocation, scaffold gap is present, inconsistency = 9482598 76312042 76317304 699912 694642 NC_000014.9 velvet.60374 99.64 True fake: scaffold gap size wrong estimation (extensive) 76301812 76302726 701321 700407 NC_000014.9 velvet.60374 99.89 True relocation, scaffold gap is present, inconsistency = -10159 76310687 76311960 702592 701332 NC_000014.9 velvet.60374 98.74 True relocation, scaffold gap is present, inconsistency = 9521583 85848707 85850250 717756 719299 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 85850507 85852065 720298 721856 NC_000014.9 velvet.60374 99.87 True fake: scaffold gap size wrong estimation (local) 85852349 85856303 722731 726685 NC_000014.9 velvet.60374 99.9 True relocation, scaffold gap is present, inconsistency = 60681190 25158468 25164319 740372 733525 NC_000014.9 velvet.60374 99.81 True fake: not a misassembly (possible transposable element) 27579000 27579844 740468 741312 NC_000014.9 velvet.60374 100.0 True fake: not a misassembly (possible transposable element) 25148705 25151937 744554 741323 NC_000014.9 velvet.60374 99.66 True fake: scaffold gap size wrong estimation (local) 25143969 25148547 750297 745165 NC_000014.9 velvet.60374 99.91 True relocation, scaffold gap is present, inconsistency = -51137076 76276484 76281034 754851 750308 NC_000014.9 velvet.60374 99.8 True fake: scaffold gap size wrong estimation (local) 76269590 76275174 762529 756940 NC_000014.9 velvet.60374 99.34 True fake: scaffold gap size wrong estimation (local) 76267358 76269469 765608 763497 NC_000014.9 velvet.60374 99.95 True fake: scaffold gap size wrong estimation (local) 76265887 76266504 767876 767259 NC_000014.9 velvet.60374 99.84 True relocation, scaffold gap is present, inconsistency = -35745 76300660 76301621 768848 767887 NC_000014.9 velvet.60374 100.0 True relocation, scaffold gap is present, inconsistency = -10032 76303595 76310681 776274 768859 NC_000014.9 velvet.60374 99.94 True fake: scaffold gap size wrong estimation (local) 76297777 76299443 778205 776538 NC_000014.9 velvet.60374 99.58 True relocation, scaffold gap is present, inconsistency = 9541779 85841233 85844633 778216 781616 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 85845250 85846219 783112 784081 NC_000014.9 velvet.60374 100.0 True relocation, scaffold gap is present, inconsistency = -36037 85810548 85813501 784447 787400 NC_000014.9 velvet.60374 99.9 True fake: scaffold gap size wrong estimation (local) 85813502 85817151 788690 792339 NC_000014.9 velvet.60374 99.92 True fake: scaffold gap size wrong estimation (local) 85819930 85821332 792350 793752 NC_000014.9 velvet.60374 99.57 True fake: scaffold gap size wrong estimation (local) 85834809 85840954 808194 814371 NC_000014.9 velvet.60374 99.32 True fake: scaffold gap size wrong estimation (local) 85856335 85858110 825241 827015 NC_000014.9 velvet.60374 99.72 True fake: scaffold gap size wrong estimation (local) 85858266 85876520 827533 847577 NC_000014.9 velvet.60374 99.91 True fake: scaffold gap size wrong estimation (local) 85876821 85885624 848588 857756 NC_000014.9 velvet.60374 99.98 True relocation, scaffold gap is present, inconsistency = 60832720 25041317 25043944 860542 857913 NC_000014.9 velvet.60374 99.81 True fake: scaffold gap size wrong estimation (local) 25039980 25041037 862477 861420 NC_000014.9 velvet.60374 100.0 True relocation, scaffold gap is present, inconsistency = -106521 25139851 25141724 869169 867254 NC_000014.9 velvet.60374 99.67 True fake: scaffold gap size wrong estimation (local) 25134788 25137552 875166 872275 NC_000014.9 velvet.60374 97.86 True fake: scaffold gap size wrong estimation (local) 25130902 25134588 879783 876092 NC_000014.9 velvet.60374 99.62 True fake: scaffold gap size wrong estimation (local) 25101278 25104345 904985 901918 NC_000014.9 velvet.60374 99.97 True fake: scaffold gap size wrong estimation (local) 25100422 25100991 906685 906116 NC_000014.9 velvet.60374 99.82 True relocation, scaffold gap is present, inconsistency = 25841862 50942864 50945554 906696 909386 NC_000014.9 velvet.60374 99.96 True fake: scaffold gap size wrong estimation (local) 50946321 50949168 911060 913929 NC_000014.9 velvet.60374 98.64 True fake: scaffold gap size wrong estimation (local) 50951616 50952424 916814 917622 NC_000014.9 velvet.60374 98.52 True fake: scaffold gap size wrong estimation (local) 50953587 50956170 919780 923659 NC_000014.9 velvet.60374 99.88 True relocation, scaffold gap is present, inconsistency = 25924885 25027586 25028691 924774 923670 NC_000014.9 velvet.60374 99.91 True local misassembly 25028693 25031703 927795 924785 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (extensive) 25014464 25019854 933681 928174 NC_000014.9 velvet.60374 99.96 True relocation, scaffold gap is present, inconsistency = 25946964 50970584 50971893 937447 938756 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 50972179 50973786 940007 941614 NC_000014.9 velvet.60374 99.19 True fake: scaffold gap size wrong estimation (local) 50973787 50974758 944399 945370 NC_000014.9 velvet.60374 98.97 True fake: scaffold gap size wrong estimation (local) 50974991 50980992 946451 952452 NC_000014.9 velvet.60374 99.93 True relocation, scaffold gap is present, inconsistency = 7829498 58810501 58813144 955107 952463 NC_000014.9 velvet.60374 99.74 True relocation, scaffold gap is present, inconsistency = 16159403 74972558 74981844 955118 964404 NC_000014.9 velvet.60374 99.92 True fake: not a misassembly (possible transposable element) 24984209 24990377 970583 964415 NC_000014.9 velvet.60374 100.0 True fake: not a misassembly (possible transposable element) 74981858 74983193 970594 971929 NC_000014.9 velvet.60374 100.0 True relocation, scaffold gap is present, inconsistency = -45844193 29139011 29150829 971940 983795 NC_000014.9 velvet.60374 99.3 True fake: scaffold gap size wrong estimation (local) 29168074 29170948 1001865 1004739 NC_000014.9 velvet.60374 99.9 True fake: scaffold gap size wrong estimation (local) 29171259 29172018 1005872 1006631 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 29172302 29174300 1006855 1008871 NC_000014.9 velvet.60374 98.39 True fake: not a misassembly (possible transposable element) 53562554 53565299 1009119 1011864 NC_000014.9 velvet.60374 99.89 True fake: not a misassembly (possible transposable element) 29176725 29180315 1011875 1015465 NC_000014.9 velvet.60374 99.97 True fake: scaffold gap size wrong estimation (local) 29180567 29183150 1016575 1019143 NC_000014.9 velvet.60374 99.3 True relocation, scaffold gap is present, inconsistency = 51504047 80687208 80689097 1021043 1019154 NC_000014.9 velvet.60374 100.0 True fake: scaffold gap size wrong estimation (local) 80682055 80686556 1027622 1022393 NC_000014.9 velvet.60374 99.58 True relocation, scaffold gap is present, inconsistency = 13827187 66840276 66854857 1027633 1043626 NC_000014.9 velvet.60374 97.92 True relocation, scaffold gap is present, inconsistency = 23383502 43442716 43444467 1057684 1055933 NC_000014.9 velvet.60374 99.89 True relocation, scaffold gap is present, inconsistency = -37207056 80647127 80649761 1060329 1057695 NC_000014.9 velvet.60374 99.92 True relocation, scaffold gap is present, inconsistency = 52470506 28174142 28176610 1060340 1062808 NC_000014.9 velvet.60374 99.88 True relocation, scaffold gap is present, inconsistency = 38702764 66879385 66884821 1062819 1068255 NC_000014.9 velvet.60374 100.0 True relocation, scaffold gap is present, inconsistency = 22009998 44859540 44869376 1078102 1068266 NC_000014.9 velvet.60374 100.0 True relocation, scaffold gap is present, inconsistency = 1616457 46485844 46494523 1078113 1086836 NC_000014.9 velvet.60374 99.39 True relocation, scaffold gap is present, inconsistency = -17291012 29203522 29208286 1086847 1092336 NC_000014.9 velvet.60374 99.81 True relocation, scaffold gap is present, inconsistency = 19859729 49068026 49069293 1093614 1092347 NC_000014.9 velvet.60374 99.92 True relocation, scaffold gap is present, inconsistency = 19873668 29183404 29193918 1094054 1104602 NC_000014.9 velvet.60374 99.35 True CONTIG velvet.60374 1104606 misassembled CONTIG velvet.60437 315 unaligned 93192183 93192787 194 826 NC_000014.9 velvet.60440 100.0 True fake: scaffold gap size wrong estimation (local) 93194933 93195456 3725 4248 NC_000014.9 velvet.60440 100.0 True fake: scaffold gap size wrong estimation (local) 93197501 93198121 7538 8158 NC_000014.9 velvet.60440 100.0 True local misassembly 93198725 93199239 8159 8673 NC_000014.9 velvet.60440 98.06 True relocation, scaffold gap is present, inconsistency = -39977773 53245466 53252648 32673 39914 NC_000014.9 velvet.60440 99.92 True relocation, scaffold gap is present, inconsistency = 39977641 93234573 93236007 44198 45632 NC_000014.9 velvet.60440 100.0 True fake: scaffold gap size wrong estimation (local) 93236248 93236882 46099 46733 NC_000014.9 velvet.60440 100.0 True fake: scaffold gap size wrong estimation (local) 93237083 93241161 47510 51705 NC_000014.9 velvet.60440 99.93 True fake: scaffold gap size wrong estimation (local) 93241395 93243224 52602 54431 NC_000014.9 velvet.60440 100.0 True fake: scaffold gap size wrong estimation (local) 93243499 93244402 54964 55867 NC_000014.9 velvet.60440 99.89 True fake: scaffold gap size wrong estimation (local) 93244906 93247064 57224 59350 NC_000014.9 velvet.60440 96.72 True fake: scaffold gap size wrong estimation (local) 93247649 93249290 60696 62337 NC_000014.9 velvet.60440 100.0 True relocation, scaffold gap is present, inconsistency = -33883109 59367273 59369633 63429 65789 NC_000014.9 velvet.60440 99.96 True fake: scaffold gap size wrong estimation (local) 59369784 59374736 66581 71786 NC_000014.9 velvet.60440 99.96 True fake: scaffold gap size wrong estimation (local) 59375001 59381670 72764 80273 NC_000014.9 velvet.60440 99.65 True fake: scaffold gap size wrong estimation (local) 59381932 59383962 81313 83378 NC_000014.9 velvet.60440 99.8 True fake: scaffold gap size wrong estimation (local) 59386442 59387095 86305 86958 NC_000014.9 velvet.60440 99.85 True fake: scaffold gap size wrong estimation (local) 59387957 59389198 86969 88210 NC_000014.9 velvet.60440 100.0 True local misassembly 59387097 59387891 88221 89015 NC_000014.9 velvet.60440 99.87 True fake: scaffold gap size wrong estimation (local) 59389217 59391249 91287 93322 NC_000014.9 velvet.60440 99.71 True relocation, scaffold gap is present, inconsistency = -6116992 53282163 53283200 101228 102265 NC_000014.9 velvet.60440 99.9 True fake: scaffold gap size wrong estimation (local) 53283441 53284738 103160 104457 NC_000014.9 velvet.60440 99.61 True fake: scaffold gap size wrong estimation (local) 53285006 53291506 104578 111944 NC_000014.9 velvet.60440 99.95 True fake: scaffold gap size wrong estimation (local) 53291666 53294446 112907 115687 NC_000014.9 velvet.60440 99.71 True fake: scaffold gap size wrong estimation (local) 53295320 53298425 117397 120502 NC_000014.9 velvet.60440 99.94 True fake: scaffold gap size wrong estimation (local) 53303811 53309098 123959 130011 NC_000014.9 velvet.60440 99.85 True fake: scaffold gap size wrong estimation (local) 53309377 53309906 130757 131283 NC_000014.9 velvet.60440 99.43 True relocation, scaffold gap is present, inconsistency = 35694736 89016594 89018748 145389 143235 NC_000014.9 velvet.60440 100.0 True relocation, scaffold gap is present, inconsistency = 4258443 93277202 93278167 145400 146365 NC_000014.9 velvet.60440 100.0 True fake: scaffold gap size wrong estimation (local) 93278397 93279593 147411 148607 NC_000014.9 velvet.60440 100.0 True local misassembly 93279753 93280862 148608 149717 NC_000014.9 velvet.60440 99.1 True relocation, scaffold gap is present, inconsistency = 4261787 89015100 89016027 152583 151656 NC_000014.9 velvet.60440 100.0 True fake: scaffold gap size wrong estimation (local) 88993636 88994525 170804 169915 NC_000014.9 velvet.60440 100.0 True fake: scaffold gap size wrong estimation (local) 88990728 88993351 174196 171573 NC_000014.9 velvet.60440 100.0 True fake: scaffold gap size wrong estimation (local) 88989622 88990639 175359 174342 NC_000014.9 velvet.60440 100.0 True fake: scaffold gap size wrong estimation (local) 88988198 88989368 177273 176103 NC_000014.9 velvet.60440 100.0 True fake: not a misassembly (possible transposable element) 47032373 47033336 177284 178247 NC_000014.9 velvet.60440 99.9 True fake: not a misassembly (possible transposable element) 88981026 88987934 185160 178258 NC_000014.9 velvet.60440 99.9 True relocation, scaffold gap is present, inconsistency = 12009048 76971305 76971967 185171 185833 NC_000014.9 velvet.60440 99.85 True fake: scaffold gap size wrong estimation (local) 76974484 76975512 188898 189926 NC_000014.9 velvet.60440 100.0 True fake: scaffold gap size wrong estimation (local) 76975780 76977157 190349 191726 NC_000014.9 velvet.60440 100.0 True relocation, scaffold gap is present, inconsistency = -17570792 59406376 59409189 191737 194702 NC_000014.9 velvet.60440 99.93 True relocation, scaffold gap is present, inconsistency = 33538166 92949142 92953922 196489 201316 NC_000014.9 velvet.60440 99.92 True fake: scaffold gap size wrong estimation (local) 92954167 92956135 202342 204310 NC_000014.9 velvet.60440 100.0 True fake: scaffold gap size wrong estimation (local) 92956374 92965754 205311 214691 NC_000014.9 velvet.60440 99.98 True relocation, scaffold gap is present, inconsistency = -15987802 76981080 76982337 217819 219076 NC_000014.9 velvet.60440 99.21 True fake: scaffold gap size wrong estimation (local) 76983843 76987097 221371 224625 NC_000014.9 velvet.60440 100.0 True relocation, scaffold gap is present, inconsistency = -8007328 68982780 68984072 227636 228962 NC_000014.9 velvet.60440 99.92 True relocation, scaffold gap is present, inconsistency = 4694843 73679269 73681120 231171 229316 NC_000014.9 velvet.60440 99.78 True fake: scaffold gap size wrong estimation (local) 73678105 73678987 232989 232107 NC_000014.9 velvet.60440 99.89 True relocation, scaffold gap is present, inconsistency = 15972 73658457 73659189 235933 236665 NC_000014.9 velvet.60440 100.0 True fake: scaffold gap size wrong estimation (local) 73659442 73659991 236972 237521 NC_000014.9 velvet.60440 99.82 True fake: not a misassembly (possible transposable element) 68984795 68985852 237532 238589 NC_000014.9 velvet.60440 100.0 True fake: not a misassembly (possible transposable element) 73660231 73661104 240754 241627 NC_000014.9 velvet.60440 100.0 True relocation, scaffold gap is present, inconsistency = 19319896 92981011 92983832 241638 244459 NC_000014.9 velvet.60440 99.96 True relocation, scaffold gap is present, inconsistency = 11023 92996610 93000731 246214 250335 NC_000014.9 velvet.60440 99.88 True fake: scaffold gap size wrong estimation (local) 93001331 93002174 251652 252495 NC_000014.9 velvet.60440 100.0 True fake: scaffold gap size wrong estimation (local) 93002265 93021350 252664 272452 NC_000014.9 velvet.60440 99.53 True fake: scaffold gap size wrong estimation (local) 93021629 93022473 273308 274152 NC_000014.9 velvet.60440 100.0 True relocation, scaffold gap is present, inconsistency = -19334618 73687866 73689049 274163 275323 NC_000014.9 velvet.60440 98.04 True fake: scaffold gap size wrong estimation (local) 73690684 73691295 277931 278542 NC_000014.9 velvet.60440 100.0 True fake: scaffold gap size wrong estimation (local) 73693136 73694553 281191 282649 NC_000014.9 velvet.60440 99.78 True fake: scaffold gap size wrong estimation (extensive) 73711551 73716427 290645 295624 NC_000014.9 velvet.60440 99.9 True fake: scaffold gap size wrong estimation (local) 73716720 73719843 296793 299917 NC_000014.9 velvet.60440 99.81 True fake: scaffold gap size wrong estimation (local) 73720549 73723183 301776 304410 NC_000014.9 velvet.60440 100.0 True fake: scaffold gap size wrong estimation (local) 73728288 73730724 304564 307000 NC_000014.9 velvet.60440 99.79 True relocation, scaffold gap is present, inconsistency = -1363311 72371770 72374132 311357 313719 NC_000014.9 velvet.60440 99.79 True fake: not a misassembly (possible transposable element) 54796848 54800743 313730 317649 NC_000014.9 velvet.60440 98.27 True fake: not a misassembly (possible transposable element) 72374529 72377359 317831 320661 NC_000014.9 velvet.60440 99.89 True relocation, scaffold gap is present, inconsistency = -17575193 54802177 54806774 320672 325273 NC_000014.9 velvet.60440 99.83 True fake: scaffold gap size wrong estimation (local) 54806910 54810303 326228 329621 NC_000014.9 velvet.60440 99.94 True fake: scaffold gap size wrong estimation (local) 54810409 54816352 330446 336429 NC_000014.9 velvet.60440 99.21 True relocation, scaffold gap is present, inconsistency = 38271157 93087520 93088356 336440 337276 NC_000014.9 velvet.60440 100.0 True fake: scaffold gap size wrong estimation (local) 93088799 93095592 338600 345393 NC_000014.9 velvet.60440 99.99 True fake: scaffold gap size wrong estimation (local) 93101796 93102513 351582 352299 NC_000014.9 velvet.60440 100.0 True fake: not a misassembly (possible transposable element) 54825064 54825726 353401 354063 NC_000014.9 velvet.60440 100.0 True fake: not a misassembly (possible transposable element) 93103426 93105538 354155 356166 NC_000014.9 velvet.60440 95.2 True fake: scaffold gap size wrong estimation (local) 93109007 93111491 364274 366743 NC_000014.9 velvet.60440 99.4 True fake: scaffold gap size wrong estimation (local) 93111730 93112457 367217 367944 NC_000014.9 velvet.60440 100.0 True fake: scaffold gap size wrong estimation (local) 93118252 93118768 368253 368769 NC_000014.9 velvet.60440 98.07 True local misassembly 93112716 93114903 369011 371198 NC_000014.9 velvet.60440 99.95 True fake: scaffold gap size wrong estimation (local) 93120362 93121825 371209 372672 NC_000014.9 velvet.60440 99.86 True fake: scaffold gap size wrong estimation (local) 93122940 93123424 374821 375346 NC_000014.9 velvet.60440 100.0 True fake: not a misassembly (possible transposable element) 91728418 91729084 377389 378055 NC_000014.9 velvet.60440 99.7 True fake: not a misassembly (possible transposable element) 93128488 93129552 383248 384312 NC_000014.9 velvet.60440 99.81 True relocation, scaffold gap is present, inconsistency = 45401992 47721244 47724134 389520 386674 NC_000014.9 velvet.60440 98.36 True relocation, scaffold gap is present, inconsistency = 7090387 54826513 54829524 401512 404523 NC_000014.9 velvet.60440 99.97 True fake: not a misassembly (possible transposable element) 93106002 93107002 404534 405534 NC_000014.9 velvet.60440 100.0 True fake: not a misassembly (possible transposable element) 54829620 54830362 405545 406287 NC_000014.9 velvet.60440 99.87 True local misassembly 54830449 54831185 406288 407024 NC_000014.9 velvet.60440 98.64 True relocation, scaffold gap is present, inconsistency = 7130008 47692134 47700422 416318 407043 NC_000014.9 velvet.60440 99.28 True fake: scaffold gap size wrong estimation (local) 47690007 47691874 418951 417084 NC_000014.9 velvet.60440 99.89 True fake: scaffold gap size wrong estimation (local) 47686999 47689535 422714 420178 NC_000014.9 velvet.60440 99.96 True CONTIG velvet.60440 422714 misassembled 96059074 96061645 3028 427 NC_000014.9 velvet.60459 98.08 True fake: scaffold gap size wrong estimation (local) 96049764 96058976 12512 3300 NC_000014.9 velvet.60459 99.9 True relocation, scaffold gap is present, inconsistency = 59228219 36820516 36821534 13541 12523 NC_000014.9 velvet.60459 99.71 True relocation, scaffold gap is present, inconsistency = -37145235 73962764 73964838 16528 14454 NC_000014.9 velvet.60459 100.0 True fake: scaffold gap size wrong estimation (local) 73959844 73962018 20139 17965 NC_000014.9 velvet.60459 99.95 True fake: scaffold gap size wrong estimation (local) 73957350 73959608 23344 21134 NC_000014.9 velvet.60459 97.87 True fake: scaffold gap size wrong estimation (local) 73955226 73956039 26179 25366 NC_000014.9 velvet.60459 100.0 True fake: scaffold gap size wrong estimation (local) 73952945 73954558 29561 27948 NC_000014.9 velvet.60459 100.0 True relocation, scaffold gap is present, inconsistency = 34429 73913434 73914255 33822 34643 NC_000014.9 velvet.60459 100.0 True fake: scaffold gap size wrong estimation (local) 73916028 73916739 37490 38201 NC_000014.9 velvet.60459 100.0 True fake: scaffold gap size wrong estimation (local) 73916972 73917570 40084 40682 NC_000014.9 velvet.60459 100.0 True fake: scaffold gap size wrong estimation (local) 73919282 73921526 43093 45380 NC_000014.9 velvet.60459 99.87 True fake: scaffold gap size wrong estimation (local) 73921695 73924701 46404 49410 NC_000014.9 velvet.60459 100.0 True fake: scaffold gap size wrong estimation (local) 73928141 73928849 54079 54787 NC_000014.9 velvet.60459 99.86 True inversion, scaffold gap is present 73928875 73932639 62551 57897 NC_000014.9 velvet.60459 99.97 True local misassembly 73932825 73933898 63635 62562 NC_000014.9 velvet.60459 100.0 True fake: scaffold gap size wrong estimation (extensive) 73910854 73912160 93741 92435 NC_000014.9 velvet.60459 100.0 True fake: scaffold gap size wrong estimation (local) 73909608 73910460 95282 94430 NC_000014.9 velvet.60459 100.0 True fake: scaffold gap size wrong estimation (local) 73907896 73909586 97537 95847 NC_000014.9 velvet.60459 100.0 True fake: scaffold gap size wrong estimation (local) 73906684 73907320 98902 98266 NC_000014.9 velvet.60459 100.0 True fake: scaffold gap size wrong estimation (local) 73904711 73905887 101797 100621 NC_000014.9 velvet.60459 99.15 True local misassembly 73903517 73904481 102762 101798 NC_000014.9 velvet.60459 98.96 True local misassembly 73902345 73903154 103572 102763 NC_000014.9 velvet.60459 99.75 True fake: scaffold gap size wrong estimation (local) 73900554 73901293 105388 104648 NC_000014.9 velvet.60459 99.87 True fake: scaffold gap size wrong estimation (local) 73897969 73899236 108683 107416 NC_000014.9 velvet.60459 100.0 True fake: scaffold gap size wrong estimation (local) 73895730 73897685 111653 109698 NC_000014.9 velvet.60459 98.93 True fake: scaffold gap size wrong estimation (local) 73893065 73894407 115044 113702 NC_000014.9 velvet.60459 100.0 True fake: scaffold gap size wrong estimation (local) 73891550 73892790 117339 116099 NC_000014.9 velvet.60459 100.0 True fake: scaffold gap size wrong estimation (local) 73886004 73889817 123852 119425 NC_000014.9 velvet.60459 100.0 True fake: scaffold gap size wrong estimation (local) 73883741 73885022 127021 125740 NC_000014.9 velvet.60459 100.0 True fake: scaffold gap size wrong estimation (local) 73880994 73881765 130584 129813 NC_000014.9 velvet.60459 100.0 True fake: scaffold gap size wrong estimation (local) 73878771 73880300 133828 132299 NC_000014.9 velvet.60459 99.35 True indel: indel (> 5bp) 73877896 73878764 134697 133829 NC_000014.9 velvet.60459 99.88 True fake: scaffold gap size wrong estimation (local) 73876748 73877276 135620 135092 NC_000014.9 velvet.60459 100.0 True fake: scaffold gap size wrong estimation (local) 73868273 73869474 138344 137143 NC_000014.9 velvet.60459 100.0 True fake: scaffold gap size wrong estimation (local) 73867110 73868013 139489 138586 NC_000014.9 velvet.60459 100.0 True fake: scaffold gap size wrong estimation (local) 73863876 73866000 143539 141364 NC_000014.9 velvet.60459 99.95 True fake: scaffold gap size wrong estimation (local) 73860457 73861161 148210 147506 NC_000014.9 velvet.60459 100.0 True fake: scaffold gap size wrong estimation (local) 73858518 73859763 151196 149951 NC_000014.9 velvet.60459 100.0 True relocation, scaffold gap is present, inconsistency = 18932235 54921430 54922090 156049 155389 NC_000014.9 velvet.60459 98.34 True local misassembly 54919864 54921014 157200 156050 NC_000014.9 velvet.60459 99.83 True fake: scaffold gap size wrong estimation (local) 54918168 54919705 159732 158141 NC_000014.9 velvet.60459 99.87 True fake: scaffold gap size wrong estimation (local) 54916161 54917166 164941 163936 NC_000014.9 velvet.60459 99.9 True fake: scaffold gap size wrong estimation (local) 54913366 54914537 168967 167552 NC_000014.9 velvet.60459 99.64 True fake: scaffold gap size wrong estimation (local) 54912124 54912858 170370 169636 NC_000014.9 velvet.60459 99.73 True fake: scaffold gap size wrong estimation (local) 54909529 54911224 173440 171791 NC_000014.9 velvet.60459 97.19 True fake: scaffold gap size wrong estimation (local) 54907601 54908822 176106 174885 NC_000014.9 velvet.60459 99.84 True fake: scaffold gap size wrong estimation (local) 54906794 54907348 176975 176421 NC_000014.9 velvet.60459 99.82 True fake: scaffold gap size wrong estimation (local) 54904478 54906614 180064 177929 NC_000014.9 velvet.60459 99.81 True fake: scaffold gap size wrong estimation (local) 54900472 54903852 185728 181033 NC_000014.9 velvet.60459 99.91 True fake: scaffold gap size wrong estimation (local) 54884800 54885609 195194 194385 NC_000014.9 velvet.60459 99.75 True fake: scaffold gap size wrong estimation (local) 54883668 54884485 196115 195298 NC_000014.9 velvet.60459 99.88 True fake: scaffold gap size wrong estimation (local) 54881110 54883090 199688 197708 NC_000014.9 velvet.60459 99.75 True fake: scaffold gap size wrong estimation (local) 54877771 54878961 203574 202385 NC_000014.9 velvet.60459 99.92 True fake: scaffold gap size wrong estimation (local) 54876496 54877509 205909 204896 NC_000014.9 velvet.60459 99.9 True relocation, scaffold gap is present, inconsistency = -18961884 73832875 73833441 211414 210848 NC_000014.9 velvet.60459 100.0 True relocation, scaffold gap is present, inconsistency = 18932489 54867592 54868598 244198 243202 NC_000014.9 velvet.60459 98.9 True fake: scaffold gap size wrong estimation (local) 54866117 54867302 246637 245452 NC_000014.9 velvet.60459 100.0 True relocation, scaffold gap is present, inconsistency = 16154727 38703611 38709453 254442 248574 NC_000014.9 velvet.60459 99.52 True relocation, scaffold gap is present, inconsistency = 21781062 60490526 60492533 254453 256460 NC_000014.9 velvet.60459 99.8 True fake: scaffold gap size wrong estimation (local) 60492805 60497783 257429 262420 NC_000014.9 velvet.60459 99.7 True relocation, scaffold gap is present, inconsistency = 21796063 38686236 38696731 273687 262431 NC_000014.9 velvet.60459 99.94 True fake: scaffold gap size wrong estimation (local) 38683364 38685764 277293 274892 NC_000014.9 velvet.60459 100.0 True relocation, scaffold gap is present, inconsistency = 27324102 66009877 66010789 277304 278217 NC_000014.9 velvet.60459 99.67 True relocation, scaffold gap is present, inconsistency = 22740101 88759686 88760331 287658 287013 NC_000014.9 velvet.60459 99.85 True relocation, scaffold gap is present, inconsistency = 59070926 29684320 29688610 292097 287808 NC_000014.9 velvet.60459 99.88 True relocation, scaffold gap is present, inconsistency = 3714571 25963847 25969310 292536 297999 NC_000014.9 velvet.60459 99.96 True fake: scaffold gap size wrong estimation (local) 25972991 25974711 299891 301611 NC_000014.9 velvet.60459 99.88 True fake: scaffold gap size wrong estimation (local) 25974907 25975917 302209 303219 NC_000014.9 velvet.60459 100.0 True fake: scaffold gap size wrong estimation (local) 25976199 25979688 304095 307583 NC_000014.9 velvet.60459 99.74 True relocation, scaffold gap is present, inconsistency = 3617927 22317535 22325342 348320 340513 NC_000014.9 velvet.60459 99.92 True fake: scaffold gap size wrong estimation (local) 22291291 22291824 369973 369440 NC_000014.9 velvet.60459 99.81 True fake: scaffold gap size wrong estimation (local) 22285761 22289802 376491 372447 NC_000014.9 velvet.60459 99.75 True fake: scaffold gap size wrong estimation (local) 22282583 22285497 380544 377175 NC_000014.9 velvet.60459 96.88 True fake: scaffold gap size wrong estimation (local) 22255561 22256355 409590 408796 NC_000014.9 velvet.60459 99.87 True relocation, scaffold gap is present, inconsistency = -14324 22261611 22269874 417863 409601 NC_000014.9 velvet.60459 99.78 True fake: scaffold gap size wrong estimation (local) 22253288 22254955 420957 419290 NC_000014.9 velvet.60459 99.94 True local misassembly 22254981 22255541 421528 420968 NC_000014.9 velvet.60459 100.0 True fake: not a misassembly (possible transposable element) 22240231 22241192 436911 437872 NC_000014.9 velvet.60459 99.58 True fake: not a misassembly (possible transposable element) 22229409 22232661 446548 442755 NC_000014.9 velvet.60459 99.78 True CONTIG velvet.60459 446939 misassembled 77523596 77524454 1 859 NC_000014.9 velvet.60462 99.88 True fake: scaffold gap size wrong estimation (local) 77524455 77525334 2441 3320 NC_000014.9 velvet.60462 97.95 True fake: scaffold gap size wrong estimation (local) 77526117 77526812 3519 4214 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 77527330 77528247 7326 8242 NC_000014.9 velvet.60462 99.56 True fake: scaffold gap size wrong estimation (local) 77530564 77531442 10887 11765 NC_000014.9 velvet.60462 98.75 True fake: scaffold gap size wrong estimation (local) 77531814 77532541 12249 12976 NC_000014.9 velvet.60462 99.86 True fake: scaffold gap size wrong estimation (local) 77533321 77533900 14528 15107 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 77535222 77536963 16624 18365 NC_000014.9 velvet.60462 99.89 True fake: scaffold gap size wrong estimation (local) 77537317 77538606 19547 20836 NC_000014.9 velvet.60462 99.61 True fake: scaffold gap size wrong estimation (local) 77538863 77539503 21292 21932 NC_000014.9 velvet.60462 100.0 True relocation, scaffold gap is present, inconsistency = 9973851 67559076 67560022 27868 26922 NC_000014.9 velvet.60462 99.79 True relocation, scaffold gap is present, inconsistency = 45430837 22127705 22128228 27879 28383 NC_000014.9 velvet.60462 95.91 True fake: scaffold gap size wrong estimation (local) 22129782 22130802 31146 32169 NC_000014.9 velvet.60462 99.71 True fake: not a misassembly (possible transposable element) 67555187 67556317 33816 32686 NC_000014.9 velvet.60462 99.91 True fake: not a misassembly (possible transposable element) 22131087 22133022 35050 36985 NC_000014.9 velvet.60462 100.0 True relocation, scaffold gap is present, inconsistency = 9421 22142454 22145350 39884 36996 NC_000014.9 velvet.60462 99.0 True inversion, scaffold gap is present 22135223 22142250 39895 46915 NC_000014.9 velvet.60462 99.72 True inversion, scaffold gap is present 22133335 22134877 48468 46926 NC_000014.9 velvet.60462 99.87 True relocation, scaffold gap is present, inconsistency = 10512 22145400 22150693 48479 53772 NC_000014.9 velvet.60462 99.79 True fake: not a misassembly (possible transposable element) 77561607 77563499 53783 55675 NC_000014.9 velvet.60462 99.84 True fake: not a misassembly (possible transposable element) 22150718 22151618 55686 56586 NC_000014.9 velvet.60462 99.89 True relocation, scaffold gap is present, inconsistency = 55411704 77565277 77566525 58541 59789 NC_000014.9 velvet.60462 99.84 True fake: scaffold gap size wrong estimation (local) 77567261 77568556 61352 62685 NC_000014.9 velvet.60462 99.45 True fake: scaffold gap size wrong estimation (local) 77569149 77569830 64295 64976 NC_000014.9 velvet.60462 99.71 True local misassembly 77570244 77571257 64977 65990 NC_000014.9 velvet.60462 98.82 True relocation, scaffold gap is present, inconsistency = -55409247 22162213 22169824 66193 73803 NC_000014.9 velvet.60462 99.78 True relocation, scaffold gap is present, inconsistency = 55408463 77580857 77581427 76373 76943 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 77593135 77595129 88650 90654 NC_000014.9 velvet.60462 99.05 True fake: scaffold gap size wrong estimation (local) 77595352 77596070 91621 92339 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 77596541 77597527 93024 94010 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 77609636 77610167 100750 101281 NC_000014.9 velvet.60462 99.81 True relocation, scaffold gap is present, inconsistency = -28043902 49566932 49567723 101948 102739 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 49569013 49569986 104642 105615 NC_000014.9 velvet.60462 98.97 True relocation, scaffold gap is present, inconsistency = 28026745 77607019 77608817 115903 117701 NC_000014.9 velvet.60462 99.89 True fake: scaffold gap size wrong estimation (local) 77608965 77609550 119113 119698 NC_000014.9 velvet.60462 100.0 True relocation, scaffold gap is present, inconsistency = 15275522 92885083 92894471 119709 129097 NC_000014.9 velvet.60462 99.87 True fake: scaffold gap size wrong estimation (local) 92896242 92897672 131029 132459 NC_000014.9 velvet.60462 100.0 True local misassembly 92895255 92896207 132470 133422 NC_000014.9 velvet.60462 99.9 True relocation, scaffold gap is present, inconsistency = -15278020 77619795 77620330 135030 135565 NC_000014.9 velvet.60462 100.0 True relocation, scaffold gap is present, inconsistency = -8483 77611858 77614408 135576 138126 NC_000014.9 velvet.60462 99.84 True local misassembly 77614992 77616471 138127 139606 NC_000014.9 velvet.60462 98.92 True local misassembly 77616472 77619521 140365 143414 NC_000014.9 velvet.60462 99.67 True fake: scaffold gap size wrong estimation (local) 77624094 77624803 143425 144134 NC_000014.9 velvet.60462 100.0 True local misassembly 77625018 77626087 144135 145204 NC_000014.9 velvet.60462 99.07 True local misassembly 77621207 77621861 145978 146632 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 77626832 77627878 146851 147897 NC_000014.9 velvet.60462 99.04 True fake: scaffold gap size wrong estimation (local) 77628632 77629452 149217 150037 NC_000014.9 velvet.60462 98.66 True local misassembly 77629698 77630306 150038 150646 NC_000014.9 velvet.60462 98.36 True fake: scaffold gap size wrong estimation (local) 77632548 77633241 153586 154279 NC_000014.9 velvet.60462 100.0 True local misassembly 77631558 77632254 154290 154986 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 77636000 77637256 161512 162768 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 77638461 77639149 166373 167061 NC_000014.9 velvet.60462 99.85 True local misassembly 77637534 77638180 167405 168051 NC_000014.9 velvet.60462 99.85 True fake: scaffold gap size wrong estimation (local) 77640766 77642586 171421 173158 NC_000014.9 velvet.60462 95.36 True fake: scaffold gap size wrong estimation (extensive) 77680976 77682767 204290 206081 NC_000014.9 velvet.60462 99.83 True relocation, scaffold gap is present, inconsistency = -24037 77687736 77688256 235087 235611 NC_000014.9 velvet.60462 99.24 True relocation, scaffold gap is present, inconsistency = -8544 77679723 77680678 235622 236577 NC_000014.9 velvet.60462 99.9 True fake: scaffold gap size wrong estimation (local) 77682996 77683492 239427 239970 NC_000014.9 velvet.60462 99.58 True fake: scaffold gap size wrong estimation (local) 77684623 77685234 241555 242166 NC_000014.9 velvet.60462 100.0 True local misassembly 77685757 77686505 242437 243185 NC_000014.9 velvet.60462 98.53 True fake: scaffold gap size wrong estimation (local) 77686923 77687705 244287 245073 NC_000014.9 velvet.60462 99.49 True fake: scaffold gap size wrong estimation (local) 77688874 77690825 246762 248713 NC_000014.9 velvet.60462 99.85 True fake: scaffold gap size wrong estimation (local) 77691105 77692822 249919 251636 NC_000014.9 velvet.60462 99.88 True fake: scaffold gap size wrong estimation (local) 77694015 77695162 253580 254727 NC_000014.9 velvet.60462 99.91 True relocation, scaffold gap is present, inconsistency = 17561 77712734 77714230 254738 256234 NC_000014.9 velvet.60462 99.93 True fake: scaffold gap size wrong estimation (local) 77714576 77715389 259130 259943 NC_000014.9 velvet.60462 99.75 True fake: scaffold gap size wrong estimation (local) 77717243 77717945 262482 263184 NC_000014.9 velvet.60462 100.0 True indel: indel (> 5bp) 77717959 77718728 263185 263954 NC_000014.9 velvet.60462 98.7 True fake: scaffold gap size wrong estimation (local) 77720394 77721759 266551 267916 NC_000014.9 velvet.60462 99.85 True fake: scaffold gap size wrong estimation (local) 77722043 77722860 268447 269264 NC_000014.9 velvet.60462 99.88 True fake: scaffold gap size wrong estimation (local) 77723139 77723697 270281 270839 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 77752444 77753702 299193 300451 NC_000014.9 velvet.60462 99.84 True fake: scaffold gap size wrong estimation (local) 77754344 77755159 300958 301773 NC_000014.9 velvet.60462 99.88 True relocation, scaffold gap is present, inconsistency = -30984 77724951 77725697 302549 303295 NC_000014.9 velvet.60462 98.66 True fake: scaffold gap size wrong estimation (local) 77728459 77731833 308340 311714 NC_000014.9 velvet.60462 99.91 True local misassembly 77731937 77732717 312094 312874 NC_000014.9 velvet.60462 99.87 True fake: scaffold gap size wrong estimation (local) 77732954 77733506 313808 314360 NC_000014.9 velvet.60462 100.0 True relocation, scaffold gap is present, inconsistency = 22237881 55464486 55467405 344947 342028 NC_000014.9 velvet.60462 99.93 True fake: scaffold gap size wrong estimation (local) 55460627 55461581 345912 344958 NC_000014.9 velvet.60462 100.0 True relocation, scaffold gap is present, inconsistency = 22306583 77768175 77769229 345923 346977 NC_000014.9 velvet.60462 99.91 True fake: scaffold gap size wrong estimation (local) 77770576 77771858 349221 350503 NC_000014.9 velvet.60462 99.69 True relocation, scaffold gap is present, inconsistency = 22298438 55467424 55471747 355217 350894 NC_000014.9 velvet.60462 99.98 True fake: scaffold gap size wrong estimation (extensive) 55457003 55459927 358152 355228 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 55449107 55455162 367605 360728 NC_000014.9 velvet.60462 98.39 True relocation, scaffold gap is present, inconsistency = -78946 55525867 55526728 369791 368930 NC_000014.9 velvet.60462 99.65 True local misassembly 55527001 55528255 371056 369802 NC_000014.9 velvet.60462 99.76 True fake: scaffold gap size wrong estimation (local) 55524696 55525246 374211 373661 NC_000014.9 velvet.60462 100.0 True relocation, scaffold gap is present, inconsistency = -13497 55537656 55538182 374748 374222 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 55532103 55537006 381990 376359 NC_000014.9 velvet.60462 98.88 True fake: scaffold gap size wrong estimation (local) 55521630 55522910 387388 386108 NC_000014.9 velvet.60462 99.69 True fake: scaffold gap size wrong estimation (local) 55518192 55520079 391772 389876 NC_000014.9 velvet.60462 99.74 True fake: scaffold gap size wrong estimation (local) 55511997 55517927 398797 392047 NC_000014.9 velvet.60462 99.11 True fake: scaffold gap size wrong estimation (local) 55510031 55511721 401325 399603 NC_000014.9 velvet.60462 99.94 True fake: scaffold gap size wrong estimation (local) 55508233 55509283 404284 403234 NC_000014.9 velvet.60462 100.0 True relocation, scaffold gap is present, inconsistency = 68704 55578235 55579412 404532 405709 NC_000014.9 velvet.60462 99.83 True fake: scaffold gap size wrong estimation (local) 55579580 55580168 405724 406360 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 55580516 55585047 407649 412066 NC_000014.9 velvet.60462 97.42 True fake: scaffold gap size wrong estimation (local) 55585162 55589351 413014 417203 NC_000014.9 velvet.60462 100.0 True fake: not a misassembly (possible transposable element) 55484380 55485221 422568 421727 NC_000014.9 velvet.60462 100.0 True fake: not a misassembly (possible transposable element) 55589959 55590703 422579 423323 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 55590976 55591580 423585 424189 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 55591879 55595884 425183 429245 NC_000014.9 velvet.60462 99.9 True fake: scaffold gap size wrong estimation (local) 55596194 55597606 430636 432039 NC_000014.9 velvet.60462 99.36 True relocation, scaffold gap is present, inconsistency = 10522 55611314 55613508 435225 437410 NC_000014.9 velvet.60462 99.41 True fake: scaffold gap size wrong estimation (local) 55613759 55619525 438296 444756 NC_000014.9 velvet.60462 99.34 True relocation, scaffold gap is present, inconsistency = 129227 55481240 55484313 448048 444975 NC_000014.9 velvet.60462 99.87 True fake: scaffold gap size wrong estimation (local) 55478987 55480294 451131 449824 NC_000014.9 velvet.60462 99.92 True fake: scaffold gap size wrong estimation (local) 55476550 55478284 454499 452765 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 55474469 55475709 457431 456191 NC_000014.9 velvet.60462 99.11 True fake: scaffold gap size wrong estimation (local) 55473342 55474043 458820 458119 NC_000014.9 velvet.60462 98.72 True fake: scaffold gap size wrong estimation (local) 55447855 55448871 478250 477190 NC_000014.9 velvet.60462 99.8 True fake: scaffold gap size wrong estimation (local) 55445738 55447609 483214 481380 NC_000014.9 velvet.60462 97.73 True fake: scaffold gap size wrong estimation (local) 55443700 55444355 486076 485421 NC_000014.9 velvet.60462 98.17 True local misassembly 55442722 55443317 486672 486077 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 55441212 55441764 489536 488984 NC_000014.9 velvet.60462 98.01 True local misassembly 55440099 55440905 490343 489537 NC_000014.9 velvet.60462 99.75 True fake: scaffold gap size wrong estimation (local) 55437426 55438898 493908 492436 NC_000014.9 velvet.60462 99.86 True fake: scaffold gap size wrong estimation (local) 55435983 55437349 498388 496996 NC_000014.9 velvet.60462 97.85 True fake: scaffold gap size wrong estimation (local) 55429791 55432134 500636 498399 NC_000014.9 velvet.60462 95.46 True fake: scaffold gap size wrong estimation (local) 55426277 55427821 504858 503314 NC_000014.9 velvet.60462 99.94 True relocation, scaffold gap is present, inconsistency = -9326 55433425 55435263 507036 505198 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 55428699 55429478 507826 507047 NC_000014.9 velvet.60462 100.0 True local misassembly 55432262 55433189 509198 508271 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 55422849 55425989 512571 509431 NC_000014.9 velvet.60462 99.94 True fake: scaffold gap size wrong estimation (local) 55421734 55422304 514572 514002 NC_000014.9 velvet.60462 99.65 True fake: scaffold gap size wrong estimation (local) 55417705 55420063 519403 517045 NC_000014.9 velvet.60462 99.96 True fake: scaffold gap size wrong estimation (local) 55415762 55417446 522118 520380 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 55408394 55415586 530604 522433 NC_000014.9 velvet.60462 99.41 True relocation, scaffold gap is present, inconsistency = 16437 55385588 55387711 534850 536973 NC_000014.9 velvet.60462 99.86 True relocation, scaffold gap is present, inconsistency = -18800 55370942 55371544 539004 539606 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 55371822 55373012 540021 541211 NC_000014.9 velvet.60462 99.92 True fake: scaffold gap size wrong estimation (local) 55373041 55373548 541678 542185 NC_000014.9 velvet.60462 99.61 True fake: scaffold gap size wrong estimation (local) 55373839 55375490 542364 544342 NC_000014.9 velvet.60462 99.94 True fake: scaffold gap size wrong estimation (local) 55375645 55377094 544906 546355 NC_000014.9 velvet.60462 99.93 True fake: scaffold gap size wrong estimation (local) 55377330 55378813 547249 548731 NC_000014.9 velvet.60462 99.87 True fake: scaffold gap size wrong estimation (local) 55379466 55380877 549703 551226 NC_000014.9 velvet.60462 98.02 True inversion, scaffold gap is present 55383528 55385303 553012 551237 NC_000014.9 velvet.60462 99.94 True relocation, scaffold gap is present, inconsistency = -24651 55407535 55408168 553656 553023 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 55402947 55406945 558722 554724 NC_000014.9 velvet.60462 99.97 True fake: scaffold gap size wrong estimation (local) 55400933 55402773 561453 559613 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 55398212 55400621 564918 562472 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 55395471 55397937 568447 565981 NC_000014.9 velvet.60462 99.92 True fake: scaffold gap size wrong estimation (local) 55394275 55395338 570422 569359 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 55393365 55394001 571352 570739 NC_000014.9 velvet.60462 96.33 True fake: scaffold gap size wrong estimation (local) 55391472 55392195 573942 573219 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 55390640 55391199 574657 574098 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 55388111 55390077 578050 576084 NC_000014.9 velvet.60462 99.95 True fake: not a misassembly (possible transposable element) 55380896 55382452 578061 579617 NC_000014.9 velvet.60462 99.87 True fake: not a misassembly (possible transposable element) 55382433 55383272 580467 579628 NC_000014.9 velvet.60462 99.52 True relocation, scaffold gap is present, inconsistency = 25682 55345825 55349599 591454 587619 NC_000014.9 velvet.60462 98.18 True fake: scaffold gap size wrong estimation (local) 55344861 55345649 593102 592314 NC_000014.9 velvet.60462 99.87 True fake: scaffold gap size wrong estimation (local) 55343498 55344531 594550 593517 NC_000014.9 velvet.60462 100.0 True fake: scaffold gap size wrong estimation (local) 55338926 55343226 599998 595558 NC_000014.9 velvet.60462 99.19 True fake: scaffold gap size wrong estimation (local) 55337247 55338041 602401 601607 NC_000014.9 velvet.60462 100.0 True relocation, scaffold gap is present, inconsistency = -25108 55356731 55359858 608030 604898 NC_000014.9 velvet.60462 99.9 True fake: scaffold gap size wrong estimation (local) 55349866 55356455 616069 609170 NC_000014.9 velvet.60462 96.35 True relocation, scaffold gap is present, inconsistency = -20883 55368510 55370738 618288 616080 NC_000014.9 velvet.60462 99.05 True fake: scaffold gap size wrong estimation (local) 55365242 55367457 622325 620127 NC_000014.9 velvet.60462 99.14 True fake: scaffold gap size wrong estimation (local) 55328181 55331531 654171 649982 NC_000014.9 velvet.60462 99.97 True fake: scaffold gap size wrong estimation (local) 55325746 55327896 657496 655346 NC_000014.9 velvet.60462 99.95 True fake: scaffold gap size wrong estimation (local) 55323642 55325462 660409 658589 NC_000014.9 velvet.60462 99.84 True fake: scaffold gap size wrong estimation (local) 55322312 55322886 662714 662140 NC_000014.9 velvet.60462 99.83 True relocation, scaffold gap is present, inconsistency = 15553 55289036 55290104 680437 679369 NC_000014.9 velvet.60462 99.91 True fake: scaffold gap size wrong estimation (local) 55287174 55288762 682929 681341 NC_000014.9 velvet.60462 99.94 True fake: scaffold gap size wrong estimation (local) 55285374 55286894 685460 683940 NC_000014.9 velvet.60462 99.93 True relocation, scaffold gap is present, inconsistency = -15514 55298372 55299472 687976 686876 NC_000014.9 velvet.60462 99.0 True local misassembly 55296912 55298240 689305 687977 NC_000014.9 velvet.60462 99.85 True relocation, scaffold gap is present, inconsistency = 11065 55282259 55283256 692893 691896 NC_000014.9 velvet.60462 100.0 True CONTIG velvet.60462 692994 misassembled 77790066 77791071 3190 4195 NC_000014.9 velvet.60468 100.0 True local misassembly 77791295 77792084 4196 4985 NC_000014.9 velvet.60468 98.73 True fake: scaffold gap size wrong estimation (local) 77795636 77796216 8991 9571 NC_000014.9 velvet.60468 100.0 True fake: scaffold gap size wrong estimation (local) 77825790 77827097 38633 39939 NC_000014.9 velvet.60468 99.77 True fake: scaffold gap size wrong estimation (local) 77858542 77863457 67815 72730 NC_000014.9 velvet.60468 99.8 True relocation, scaffold gap is present, inconsistency = -38730 77824738 77825657 72741 73660 NC_000014.9 velvet.60468 99.89 True relocation, scaffold gap is present, inconsistency = -27113368 50729324 50731274 90695 92641 NC_000014.9 velvet.60468 99.38 True fake: scaffold gap size wrong estimation (local) 50731792 50732733 93882 94823 NC_000014.9 velvet.60468 100.0 True fake: scaffold gap size wrong estimation (local) 50733384 50734099 95425 96140 NC_000014.9 velvet.60468 98.46 True relocation, scaffold gap is present, inconsistency = 27117737 77853088 77854567 97392 98802 NC_000014.9 velvet.60468 95.17 True fake: scaffold gap size wrong estimation (local) 77854676 77855953 99229 100499 NC_000014.9 velvet.60468 99.22 True relocation, scaffold gap is present, inconsistency = 36706 77892670 77893739 100510 101579 NC_000014.9 velvet.60468 100.0 True fake: scaffold gap size wrong estimation (local) 77894033 77894760 102300 103027 NC_000014.9 velvet.60468 99.86 True fake: scaffold gap size wrong estimation (local) 77895047 77898100 103747 106800 NC_000014.9 velvet.60468 99.9 True fake: scaffold gap size wrong estimation (local) 77901683 77905304 106811 110432 NC_000014.9 velvet.60468 99.92 True local misassembly 77905739 77906970 110461 111692 NC_000014.9 velvet.60468 99.11 True local misassembly 77900522 77901070 111843 112391 NC_000014.9 velvet.60468 99.64 True relocation, scaffold gap is present, inconsistency = -4615938 73285143 73285676 112402 112935 NC_000014.9 velvet.60468 100.0 True fake: scaffold gap size wrong estimation (local) 73285859 73287512 113009 114700 NC_000014.9 velvet.60468 99.69 True relocation, scaffold gap is present, inconsistency = 4620288 77909440 77911753 116340 118653 NC_000014.9 velvet.60468 99.7 True local misassembly 77911754 77912458 120600 121304 NC_000014.9 velvet.60468 98.3 True fake: scaffold gap size wrong estimation (local) 77912459 77913924 121391 122856 NC_000014.9 velvet.60468 98.16 True fake: not a misassembly (possible transposable element) 77898721 77899784 124295 123232 NC_000014.9 velvet.60468 99.91 True fake: not a misassembly (possible transposable element) 77917112 77919080 124306 126274 NC_000014.9 velvet.60468 99.95 True fake: scaffold gap size wrong estimation (local) 77924325 77926527 126411 128613 NC_000014.9 velvet.60468 99.91 True fake: scaffold gap size wrong estimation (local) 77946924 77948465 153308 154794 NC_000014.9 velvet.60468 95.03 True fake: not a misassembly (possible transposable element) 77948733 77951209 158584 156108 NC_000014.9 velvet.60468 99.76 True fake: not a misassembly (possible transposable element) 77951577 77952136 158595 159154 NC_000014.9 velvet.60468 100.0 True fake: scaffold gap size wrong estimation (local) 77952493 77954366 159954 161803 NC_000014.9 velvet.60468 98.61 True fake: scaffold gap size wrong estimation (local) 77955737 77957837 164462 166562 NC_000014.9 velvet.60468 99.95 True relocation, scaffold gap is present, inconsistency = -14119 77975659 77986218 198503 210945 NC_000014.9 velvet.60468 99.5 True fake: scaffold gap size wrong estimation (local) 77987295 77991763 212413 216879 NC_000014.9 velvet.60468 99.82 True relocation, scaffold gap is present, inconsistency = 67811 78059585 78063812 221178 216890 NC_000014.9 velvet.60468 99.81 True inversion, scaffold gap is present 78052989 78054158 221189 222358 NC_000014.9 velvet.60468 99.83 True fake: scaffold gap size wrong estimation (local) 78054430 78055042 225600 226212 NC_000014.9 velvet.60468 100.0 True inversion, scaffold gap is present 78058014 78059566 227775 226223 NC_000014.9 velvet.60468 99.94 True relocation, scaffold gap is present, inconsistency = 13060 78039195 78044943 233533 227786 NC_000014.9 velvet.60468 99.83 True fake: scaffold gap size wrong estimation (local) 78036878 78038447 236538 234969 NC_000014.9 velvet.60468 97.13 True fake: scaffold gap size wrong estimation (local) 78035116 78036395 238630 237351 NC_000014.9 velvet.60468 99.84 True fake: scaffold gap size wrong estimation (local) 78031947 78034591 242442 239798 NC_000014.9 velvet.60468 99.89 True fake: scaffold gap size wrong estimation (local) 78031059 78031675 244226 243610 NC_000014.9 velvet.60468 100.0 True fake: scaffold gap size wrong estimation (local) 78029320 78030547 245882 244655 NC_000014.9 velvet.60468 99.76 True fake: scaffold gap size wrong estimation (local) 78028420 78029045 247741 247116 NC_000014.9 velvet.60468 99.84 True fake: scaffold gap size wrong estimation (local) 78024298 78025786 252247 250817 NC_000014.9 velvet.60468 96.1 True inversion, scaffold gap is present 78022946 78024054 252320 253426 NC_000014.9 velvet.60468 99.73 True relocation, scaffold gap is present, inconsistency = 54935928 23085323 23087007 255107 253437 NC_000014.9 velvet.60468 99.1 True fake: not a misassembly (possible transposable element) 97826266 97829981 262482 258764 NC_000014.9 velvet.60468 99.46 True fake: not a misassembly (possible transposable element) 23075963 23082431 271167 263901 NC_000014.9 velvet.60468 99.97 True fake: scaffold gap size wrong estimation (local) 23074547 23075708 273284 272086 NC_000014.9 velvet.60468 99.47 True relocation, scaffold gap is present, inconsistency = 54945252 78021574 78022892 273898 275216 NC_000014.9 velvet.60468 100.0 True relocation, scaffold gap is present, inconsistency = 54961927 23050504 23059636 284459 275227 NC_000014.9 velvet.60468 100.0 True relocation, inconsistency = 54966201 78025845 78028238 284467 286860 NC_000014.9 velvet.60468 99.96 True relocation, scaffold gap is present, inconsistency = 53106415 24918478 24919419 287812 286871 NC_000014.9 velvet.60468 100.0 True relocation, scaffold gap is present, inconsistency = -53102833 78017789 78021300 291349 287823 NC_000014.9 velvet.60468 97.55 True fake: not a misassembly (possible transposable element) 87207255 87208613 293677 292319 NC_000014.9 velvet.60468 100.0 True fake: not a misassembly (possible transposable element) 78014533 78017319 296473 293688 NC_000014.9 velvet.60468 99.78 True relocation, scaffold gap is present, inconsistency = -19803609 97815290 97816583 299325 298032 NC_000014.9 velvet.60468 99.61 True fake: scaffold gap size wrong estimation (local) 97808932 97814994 306598 299775 NC_000014.9 velvet.60468 99.78 True relocation, scaffold gap is present, inconsistency = 74735528 23065461 23073393 314541 306609 NC_000014.9 velvet.60468 100.0 True fake: scaffold gap size wrong estimation (local) 23061967 23064616 319009 316360 NC_000014.9 velvet.60468 100.0 True fake: scaffold gap size wrong estimation (local) 23060680 23061688 320965 319957 NC_000014.9 velvet.60468 100.0 True relocation, scaffold gap is present, inconsistency = -74748612 97803853 97808718 327121 321539 NC_000014.9 velvet.60468 99.69 True fake: scaffold gap size wrong estimation (extensive) 97792002 97795762 331361 327601 NC_000014.9 velvet.60468 99.92 True fake: scaffold gap size wrong estimation (local) 97790884 97791809 332993 332068 NC_000014.9 velvet.60468 100.0 True relocation, scaffold gap is present, inconsistency = 74750939 23038546 23039252 334392 333686 NC_000014.9 velvet.60468 100.0 True relocation, scaffold gap is present, inconsistency = -11866 23041370 23049330 343199 335474 NC_000014.9 velvet.60468 96.99 True relocation, scaffold gap is present, inconsistency = -9307 23049429 23050487 344447 343389 NC_000014.9 velvet.60468 99.91 True fake: scaffold gap size wrong estimation (local) 23015465 23016299 379861 379027 NC_000014.9 velvet.60468 100.0 True fake: scaffold gap size wrong estimation (local) 23014436 23014940 380376 379872 NC_000014.9 velvet.60468 100.0 True fake: scaffold gap size wrong estimation (local) 23013003 23013728 383076 382351 NC_000014.9 velvet.60468 98.62 True CONTIG velvet.60468 383752 misassembled 73353718 73354304 5206 5792 NC_000014.9 velvet.60474 99.83 True fake: scaffold gap size wrong estimation (local) 73354845 73356391 7196 8742 NC_000014.9 velvet.60474 99.94 True fake: scaffold gap size wrong estimation (local) 73357766 73360302 10888 16117 NC_000014.9 velvet.60474 95.92 True fake: scaffold gap size wrong estimation (local) 73361173 73362499 17992 19318 NC_000014.9 velvet.60474 99.02 True fake: scaffold gap size wrong estimation (local) 73363727 73364304 21390 21967 NC_000014.9 velvet.60474 98.27 True fake: scaffold gap size wrong estimation (local) 73365343 73367293 23791 25741 NC_000014.9 velvet.60474 99.9 True fake: scaffold gap size wrong estimation (local) 73369351 73370440 28859 29948 NC_000014.9 velvet.60474 99.91 True fake: scaffold gap size wrong estimation (local) 73372414 73373705 32767 34058 NC_000014.9 velvet.60474 100.0 True local misassembly 73374160 73374743 34091 34674 NC_000014.9 velvet.60474 97.95 True fake: scaffold gap size wrong estimation (local) 73374973 73377462 36106 38637 NC_000014.9 velvet.60474 99.92 True fake: scaffold gap size wrong estimation (local) 73377915 73380741 39847 42701 NC_000014.9 velvet.60474 99.05 True fake: scaffold gap size wrong estimation (local) 73381027 73382177 43642 44792 NC_000014.9 velvet.60474 100.0 True fake: scaffold gap size wrong estimation (local) 73383121 73383761 46101 46741 NC_000014.9 velvet.60474 100.0 True fake: scaffold gap size wrong estimation (local) 73386231 73386883 49882 50534 NC_000014.9 velvet.60474 98.47 True fake: scaffold gap size wrong estimation (local) 73388072 73388716 52233 52877 NC_000014.9 velvet.60474 100.0 True fake: scaffold gap size wrong estimation (local) 73389644 73390662 53976 54994 NC_000014.9 velvet.60474 100.0 True fake: scaffold gap size wrong estimation (local) 73390950 73394054 55764 59380 NC_000014.9 velvet.60474 99.9 True fake: scaffold gap size wrong estimation (local) 73394240 73395051 59967 60738 NC_000014.9 velvet.60474 95.01 True fake: scaffold gap size wrong estimation (local) 73395620 73396176 61521 62077 NC_000014.9 velvet.60474 100.0 True fake: scaffold gap size wrong estimation (local) 73400054 73400960 62510 63416 NC_000014.9 velvet.60474 98.02 True fake: scaffold gap size wrong estimation (local) 73401986 73403706 65272 66992 NC_000014.9 velvet.60474 99.88 True fake: scaffold gap size wrong estimation (local) 73407339 73407971 72580 73212 NC_000014.9 velvet.60474 100.0 True local misassembly 73405597 73406107 73223 73733 NC_000014.9 velvet.60474 100.0 True fake: scaffold gap size wrong estimation (local) 73408928 73411102 77280 79454 NC_000014.9 velvet.60474 100.0 True fake: scaffold gap size wrong estimation (local) 73411354 73411939 80834 81419 NC_000014.9 velvet.60474 99.66 True fake: scaffold gap size wrong estimation (local) 73415767 73416347 86706 87286 NC_000014.9 velvet.60474 99.83 True fake: scaffold gap size wrong estimation (extensive) 73436037 73436724 98228 98911 NC_000014.9 velvet.60474 99.42 True fake: scaffold gap size wrong estimation (local) 73437262 73438398 99238 100405 NC_000014.9 velvet.60474 97.35 True fake: scaffold gap size wrong estimation (local) 73438661 73440603 101517 103439 NC_000014.9 velvet.60474 98.87 True fake: scaffold gap size wrong estimation (local) 73441550 73442113 105177 105740 NC_000014.9 velvet.60474 99.82 True relocation, scaffold gap is present, inconsistency = -14775 73456409 73459355 134811 137870 NC_000014.9 velvet.60474 99.93 True fake: scaffold gap size wrong estimation (local) 73460370 73463921 139725 143277 NC_000014.9 velvet.60474 99.92 True fake: scaffold gap size wrong estimation (local) 73464551 73465423 144833 145705 NC_000014.9 velvet.60474 99.77 True CONTIG velvet.60474 162492 misassembled CONTIG velvet.60487 3804 unaligned 51945134 51945845 1 684 NC_000014.9 velvet.60499 96.01 True CONTIG velvet.60499 684 correct 30835971 30836567 1766 2362 NC_000014.9 velvet.60500 100.0 True fake: scaffold gap size wrong estimation (local) 30837424 30837917 3267 3803 NC_000014.9 velvet.60500 100.0 True fake: scaffold gap size wrong estimation (local) 30839644 30840987 6634 7977 NC_000014.9 velvet.60500 99.11 True fake: scaffold gap size wrong estimation (local) 30841595 30843492 9555 11452 NC_000014.9 velvet.60500 99.95 True CONTIG velvet.60500 15145 correct 91586572 91588126 15383 13787 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 91584350 91585238 18515 17597 NC_000014.9 velvet.60506 96.74 True fake: scaffold gap size wrong estimation (local) 91545753 91547620 51667 49772 NC_000014.9 velvet.60506 97.94 True relocation, scaffold gap is present, inconsistency = -12066 91553787 91555855 55699 53631 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 91550712 91552117 57549 56140 NC_000014.9 velvet.60506 99.86 True fake: scaffold gap size wrong estimation (local) 91549662 91550190 65003 64475 NC_000014.9 velvet.60506 100.0 True relocation, scaffold gap is present, inconsistency = 41754591 49793909 49794575 66165 65499 NC_000014.9 velvet.60506 99.85 True fake: scaffold gap size wrong estimation (local) 49792502 49793886 70805 69422 NC_000014.9 velvet.60506 99.64 True fake: scaffold gap size wrong estimation (local) 49788821 49790712 75051 73160 NC_000014.9 velvet.60506 99.21 True fake: scaffold gap size wrong estimation (local) 49787489 49788011 77085 76563 NC_000014.9 velvet.60506 99.62 True fake: scaffold gap size wrong estimation (local) 49785890 49787400 78703 77193 NC_000014.9 velvet.60506 99.87 True relocation, scaffold gap is present, inconsistency = -41741768 91519245 91519976 87116 86385 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 91514628 91516623 92083 90088 NC_000014.9 velvet.60506 99.95 True inversion, scaffold gap is present 91517864 91518719 92385 93240 NC_000014.9 velvet.60506 99.88 True fake: scaffold gap size wrong estimation (local) 91520535 91521608 95823 96920 NC_000014.9 velvet.60506 97.81 True relocation, scaffold gap is present, inconsistency = 8823 91507513 91511644 102131 96988 NC_000014.9 velvet.60506 99.98 True fake: scaffold gap size wrong estimation (local) 91477096 91477661 130529 129964 NC_000014.9 velvet.60506 97.35 True fake: scaffold gap size wrong estimation (local) 91475059 91476544 133878 132398 NC_000014.9 velvet.60506 99.66 True relocation, scaffold gap is present, inconsistency = -12414109 103884729 103888203 138416 134843 NC_000014.9 velvet.60506 99.88 True fake: not a misassembly (possible transposable element) 76437336 76438521 139546 140731 NC_000014.9 velvet.60506 100.0 True fake: not a misassembly (possible transposable element) 103879233 103883601 146836 142279 NC_000014.9 velvet.60506 96.62 True fake: scaffold gap size wrong estimation (local) 103878285 103879040 147980 147237 NC_000014.9 velvet.60506 98.39 True relocation, scaffold gap is present, inconsistency = 12413583 91460892 91462912 151830 149770 NC_000014.9 velvet.60506 99.7 True fake: scaffold gap size wrong estimation (local) 91455241 91459126 158529 154644 NC_000014.9 velvet.60506 99.95 True fake: scaffold gap size wrong estimation (local) 91452781 91453564 161849 161066 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 91450938 91452211 164882 163596 NC_000014.9 velvet.60506 98.75 True relocation, scaffold gap is present, inconsistency = -12408191 103858160 103858912 165828 165099 NC_000014.9 velvet.60506 96.95 True fake: scaffold gap size wrong estimation (local) 103854446 103857773 170519 167192 NC_000014.9 velvet.60506 99.91 True indel: indel (> 5bp) 103853733 103854438 171317 170612 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 103851729 103852260 174083 173552 NC_000014.9 velvet.60506 100.0 True relocation, scaffold gap is present, inconsistency = 12401739 91448929 91449456 175134 174617 NC_000014.9 velvet.60506 98.07 True relocation, scaffold gap is present, inconsistency = -12413353 103847452 103850251 190013 187165 NC_000014.9 velvet.60506 99.89 True fake: scaffold gap size wrong estimation (local) 103844701 103847093 193578 191203 NC_000014.9 velvet.60506 99.24 True fake: scaffold gap size wrong estimation (local) 103841545 103842290 197651 196906 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 103839628 103840502 199820 198946 NC_000014.9 velvet.60506 99.89 True fake: scaffold gap size wrong estimation (local) 103838209 103839011 203590 202788 NC_000014.9 velvet.60506 98.75 True local misassembly 103836777 103837849 204663 203591 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 103830356 103830930 205343 204769 NC_000014.9 velvet.60506 99.83 True fake: scaffold gap size wrong estimation (local) 103828371 103829804 208665 207232 NC_000014.9 velvet.60506 99.93 True local misassembly 103827277 103828095 209484 208666 NC_000014.9 velvet.60506 98.66 True fake: scaffold gap size wrong estimation (local) 103826126 103826662 211771 211235 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 103824697 103825754 212961 211866 NC_000014.9 velvet.60506 99.9 True fake: scaffold gap size wrong estimation (local) 103823349 103824011 215561 214899 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 103820530 103821471 218836 217854 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 103819768 103820419 219498 218847 NC_000014.9 velvet.60506 99.85 True fake: scaffold gap size wrong estimation (local) 103816670 103819740 223381 220257 NC_000014.9 velvet.60506 99.93 True fake: scaffold gap size wrong estimation (local) 103814948 103815469 225656 225135 NC_000014.9 velvet.60506 99.81 True fake: scaffold gap size wrong estimation (local) 103812632 103814068 228406 226969 NC_000014.9 velvet.60506 99.79 True fake: scaffold gap size wrong estimation (local) 103808188 103809022 234674 233840 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 103805111 103807542 238625 236153 NC_000014.9 velvet.60506 99.75 True fake: scaffold gap size wrong estimation (local) 103803638 103804869 240967 239736 NC_000014.9 velvet.60506 99.51 True fake: scaffold gap size wrong estimation (local) 103802302 103803357 242694 241639 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 103801108 103802199 243948 242857 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 103772928 103775263 267950 265615 NC_000014.9 velvet.60506 99.87 True fake: scaffold gap size wrong estimation (local) 103770508 103771469 270683 269722 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 103746079 103747524 299363 297918 NC_000014.9 velvet.60506 100.0 True fake: not a misassembly (possible transposable element) 28885125 28888302 302551 299374 NC_000014.9 velvet.60506 100.0 True fake: not a misassembly (possible transposable element) 103737546 103745793 310809 302562 NC_000014.9 velvet.60506 99.94 True fake: scaffold gap size wrong estimation (local) 103731522 103737286 317682 311918 NC_000014.9 velvet.60506 99.97 True fake: scaffold gap size wrong estimation (local) 103704671 103710447 345245 339416 NC_000014.9 velvet.60506 99.97 True fake: scaffold gap size wrong estimation (local) 103701872 103704429 348917 346360 NC_000014.9 velvet.60506 99.88 True relocation, scaffold gap is present, inconsistency = -110639 103784590 103785249 376838 376179 NC_000014.9 velvet.60506 99.85 True fake: scaffold gap size wrong estimation (local) 103781067 103781672 381258 380653 NC_000014.9 velvet.60506 100.0 True local misassembly 103781925 103782808 382492 381609 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 103778660 103779156 386244 385701 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 103777257 103777899 389456 388814 NC_000014.9 velvet.60506 98.44 True fake: scaffold gap size wrong estimation (local) 103775527 103776145 390600 389982 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 103771759 103772658 394777 393878 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 103752773 103753831 410453 409395 NC_000014.9 velvet.60506 96.51 True local misassembly 103751799 103752523 411178 410454 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 103751102 103751750 412190 411542 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 103748090 103750403 416081 413768 NC_000014.9 velvet.60506 99.96 True relocation, scaffold gap is present, inconsistency = -20433 103767291 103768113 417313 416491 NC_000014.9 velvet.60506 99.88 True fake: scaffold gap size wrong estimation (local) 103764124 103764825 420355 419654 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 103761766 103762465 423846 423147 NC_000014.9 velvet.60506 100.0 True relocation, scaffold gap is present, inconsistency = -40555 103797099 103798137 429068 428030 NC_000014.9 velvet.60506 99.9 True fake: scaffold gap size wrong estimation (local) 103795165 103796013 431920 431072 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 103792986 103794310 436711 435387 NC_000014.9 velvet.60506 99.85 True relocation, scaffold gap is present, inconsistency = 47016083 56771174 56773408 442458 440206 NC_000014.9 velvet.60506 99.95 True fake: scaffold gap size wrong estimation (local) 56769458 56770959 445079 443578 NC_000014.9 velvet.60506 99.2 True local misassembly 56768436 56769172 445816 445080 NC_000014.9 velvet.60506 99.86 True fake: scaffold gap size wrong estimation (local) 56766600 56767300 449346 448646 NC_000014.9 velvet.60506 100.0 True relocation, scaffold gap is present, inconsistency = -47022649 103788692 103789238 449903 449357 NC_000014.9 velvet.60506 100.0 True relocation, scaffold gap is present, inconsistency = 15182754 88604868 88605396 450973 450445 NC_000014.9 velvet.60506 100.0 True local misassembly 88608338 88610631 453277 450984 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 88599059 88604583 459386 453288 NC_000014.9 velvet.60506 99.95 True fake: not a misassembly (possible transposable element) 54860842 54861482 461132 461772 NC_000014.9 velvet.60506 100.0 True fake: not a misassembly (possible transposable element) 88593897 88598805 466691 461783 NC_000014.9 velvet.60506 99.92 True fake: not a misassembly (possible transposable element) 56741845 56743631 468488 466702 NC_000014.9 velvet.60506 99.83 True fake: not a misassembly (possible transposable element) 88593236 88593874 469137 468499 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 88590131 88591158 473025 471998 NC_000014.9 velvet.60506 99.81 True relocation, scaffold gap is present, inconsistency = 31850463 56735415 56739124 477793 473569 NC_000014.9 velvet.60506 99.92 True fake: scaffold gap size wrong estimation (local) 56733216 56735158 480447 478505 NC_000014.9 velvet.60506 99.85 True fake: scaffold gap size wrong estimation (local) 56732428 56732941 481566 481053 NC_000014.9 velvet.60506 99.81 True fake: scaffold gap size wrong estimation (local) 56729730 56732179 484694 482225 NC_000014.9 velvet.60506 99.96 True fake: scaffold gap size wrong estimation (local) 56728113 56728653 485245 484705 NC_000014.9 velvet.60506 99.82 True fake: scaffold gap size wrong estimation (local) 56726022 56727299 488415 487138 NC_000014.9 velvet.60506 99.22 True local misassembly 56724918 56725731 489229 488416 NC_000014.9 velvet.60506 99.63 True local misassembly 56729006 56729709 490811 490108 NC_000014.9 velvet.60506 100.0 True relocation, scaffold gap is present, inconsistency = 14729 56684873 56685598 520215 519490 NC_000014.9 velvet.60506 100.0 True relocation, scaffold gap is present, inconsistency = -31892701 88577064 88577563 520725 520226 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 88575440 88576812 523085 521713 NC_000014.9 velvet.60506 97.31 True fake: scaffold gap size wrong estimation (local) 88571959 88573095 527095 525959 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 88570176 88571674 529814 528316 NC_000014.9 velvet.60506 99.93 True relocation, scaffold gap is present, inconsistency = -9761 88577843 88579926 531894 529825 NC_000014.9 velvet.60506 99.28 True fake: scaffold gap size wrong estimation (local) 88544318 88544821 559595 559092 NC_000014.9 velvet.60506 100.0 True fake: scaffold gap size wrong estimation (local) 88539519 88544073 565379 560806 NC_000014.9 velvet.60506 99.21 True fake: scaffold gap size wrong estimation (local) 88534854 88539088 570840 566606 NC_000014.9 velvet.60506 99.98 True CONTIG velvet.60506 572446 misassembled 35438856 35440673 2081 3940 NC_000014.9 velvet.60514 99.83 True fake: scaffold gap size wrong estimation (local) 35465726 35467991 30536 32795 NC_000014.9 velvet.60514 99.69 True fake: scaffold gap size wrong estimation (local) 35468187 35468938 33699 34450 NC_000014.9 velvet.60514 100.0 True fake: scaffold gap size wrong estimation (local) 35469213 35474992 35083 41943 NC_000014.9 velvet.60514 99.95 True fake: scaffold gap size wrong estimation (local) 35502641 35508094 65432 71062 NC_000014.9 velvet.60514 99.94 True fake: scaffold gap size wrong estimation (extensive) 35525899 35527354 98015 99470 NC_000014.9 velvet.60514 99.93 True fake: scaffold gap size wrong estimation (local) 35527656 35533563 100454 106361 NC_000014.9 velvet.60514 99.98 True fake: scaffold gap size wrong estimation (local) 35534590 35537369 108182 110961 NC_000014.9 velvet.60514 99.96 True CONTIG velvet.60514 110961 correct CONTIG velvet.60515 478 unaligned 62060513 62064357 1 3845 NC_000014.9 velvet.60516 99.92 True fake: scaffold gap size wrong estimation (local) 62066627 62067752 6672 7778 NC_000014.9 velvet.60516 98.21 True fake: scaffold gap size wrong estimation (local) 62067989 62068832 7970 8803 NC_000014.9 velvet.60516 98.58 True fake: scaffold gap size wrong estimation (local) 62069094 62086243 9983 28757 NC_000014.9 velvet.60516 99.74 True fake: scaffold gap size wrong estimation (local) 62086475 62088968 29785 32278 NC_000014.9 velvet.60516 99.72 True fake: scaffold gap size wrong estimation (local) 62092221 62099760 32421 39960 NC_000014.9 velvet.60516 99.67 True fake: scaffold gap size wrong estimation (local) 62099857 62107180 40855 48178 NC_000014.9 velvet.60516 99.24 True fake: scaffold gap size wrong estimation (local) 62107181 62109174 48871 50864 NC_000014.9 velvet.60516 98.6 True indel: indel (<= 5bp) 62109176 62114124 50865 55813 NC_000014.9 velvet.60516 99.76 True fake: scaffold gap size wrong estimation (local) 62114125 62116629 55936 58440 NC_000014.9 velvet.60516 99.2 True fake: scaffold gap size wrong estimation (local) 62116945 62120250 58951 62256 NC_000014.9 velvet.60516 99.7 True indel: indel (<= 5bp) 62120251 62129135 62260 71144 NC_000014.9 velvet.60516 99.88 True fake: scaffold gap size wrong estimation (local) 62129136 62130766 71259 72889 NC_000014.9 velvet.60516 98.47 True fake: scaffold gap size wrong estimation (local) 62130853 62134844 73628 77673 NC_000014.9 velvet.60516 99.9 True indel: indel (> 5bp) 62134873 62135432 77716 78278 NC_000014.9 velvet.60516 99.11 True relocation, scaffold gap is present, inconsistency = 12690 62149636 62150339 80495 79792 NC_000014.9 velvet.60516 99.72 True fake: scaffold gap size wrong estimation (local) 62147520 62148388 82773 81906 NC_000014.9 velvet.60516 98.85 True fake: scaffold gap size wrong estimation (local) 62137062 62147250 94000 83730 NC_000014.9 velvet.60516 99.64 True inversion, scaffold gap is present 62150600 62153776 95556 98734 NC_000014.9 velvet.60516 99.84 True fake: scaffold gap size wrong estimation (local) 62156734 62162227 98745 104270 NC_000014.9 velvet.60516 99.34 True relocation, scaffold gap is present, inconsistency = -8251 62153987 62155249 104281 105543 NC_000014.9 velvet.60516 99.84 True fake: scaffold gap size wrong estimation (local) 62155465 62156494 107290 108319 NC_000014.9 velvet.60516 99.81 True fake: scaffold gap size wrong estimation (local) 62162514 62171072 108330 116980 NC_000014.9 velvet.60516 98.48 True fake: scaffold gap size wrong estimation (local) 62171174 62173811 117163 119844 NC_000014.9 velvet.60516 98.14 True fake: scaffold gap size wrong estimation (local) 62178676 62193293 124811 139792 NC_000014.9 velvet.60516 99.13 True fake: scaffold gap size wrong estimation (local) 62193427 62197609 140724 144965 NC_000014.9 velvet.60516 99.98 True fake: scaffold gap size wrong estimation (local) 62197961 62199132 146186 147357 NC_000014.9 velvet.60516 100.0 True fake: scaffold gap size wrong estimation (local) 62222520 62230501 168587 176568 NC_000014.9 velvet.60516 99.99 True relocation, scaffold gap is present, inconsistency = 17222608 79454471 79456449 179908 177930 NC_000014.9 velvet.60516 100.0 True fake: scaffold gap size wrong estimation (local) 79453302 79454091 181437 180648 NC_000014.9 velvet.60516 100.0 True fake: scaffold gap size wrong estimation (local) 79450867 79453144 184426 182089 NC_000014.9 velvet.60516 100.0 True fake: scaffold gap size wrong estimation (local) 79449995 79450584 185690 185101 NC_000014.9 velvet.60516 100.0 True fake: scaffold gap size wrong estimation (local) 79445351 79449707 190723 186367 NC_000014.9 velvet.60516 100.0 True relocation, scaffold gap is present, inconsistency = -12909143 92351825 92354152 193397 191065 NC_000014.9 velvet.60516 99.66 True fake: not a misassembly (possible transposable element) 92349465 92351639 193408 195582 NC_000014.9 velvet.60516 99.91 True fake: not a misassembly (possible transposable element) 92347931 92349148 202949 201732 NC_000014.9 velvet.60516 100.0 True relocation, scaffold gap is present, inconsistency = 12877078 79466559 79470842 207243 202960 NC_000014.9 velvet.60516 99.95 True inversion, scaffold gap is present 79471005 79472061 207254 208310 NC_000014.9 velvet.60516 100.0 True relocation, scaffold gap is present, inconsistency = 12860190 92332262 92333150 209209 208321 NC_000014.9 velvet.60516 98.76 True relocation, scaffold gap is present, inconsistency = 12858052 79472161 79473761 211258 209658 NC_000014.9 velvet.60516 99.94 True relocation, scaffold gap is present, inconsistency = -12870211 92339042 92342361 214588 211269 NC_000014.9 velvet.60516 99.88 True relocation, scaffold gap is present, inconsistency = 48997 92394134 92395449 217364 218721 NC_000014.9 velvet.60516 96.76 True relocation, scaffold gap is present, inconsistency = 12969202 79422958 79424835 220695 218818 NC_000014.9 velvet.60516 99.79 True fake: scaffold gap size wrong estimation (local) 79412785 79422163 232832 222607 NC_000014.9 velvet.60516 99.89 True fake: scaffold gap size wrong estimation (local) 79409622 79412501 236704 233829 NC_000014.9 velvet.60516 99.86 True fake: scaffold gap size wrong estimation (local) 79402202 79406316 240803 236715 NC_000014.9 velvet.60516 99.37 True relocation, scaffold gap is present, inconsistency = -8388 79406334 79409584 245065 241809 NC_000014.9 velvet.60516 100.0 True fake: scaffold gap size wrong estimation (local) 79399036 79401834 247874 245076 NC_000014.9 velvet.60516 100.0 True fake: scaffold gap size wrong estimation (local) 79395810 79398741 251871 248940 NC_000014.9 velvet.60516 100.0 True fake: scaffold gap size wrong estimation (local) 79390309 79392004 253577 251882 NC_000014.9 velvet.60516 100.0 True local misassembly 79393808 79395521 255301 253588 NC_000014.9 velvet.60516 100.0 True fake: scaffold gap size wrong estimation (local) 79389165 79390037 256184 255312 NC_000014.9 velvet.60516 98.85 True local misassembly 79388085 79388818 257067 256334 NC_000014.9 velvet.60516 99.86 True fake: scaffold gap size wrong estimation (local) 79377733 79380136 264363 261960 NC_000014.9 velvet.60516 100.0 True fake: scaffold gap size wrong estimation (local) 79370592 79377477 272635 265289 NC_000014.9 velvet.60516 99.99 True relocation, scaffold gap is present, inconsistency = 17135238 62232837 62233763 274226 275152 NC_000014.9 velvet.60516 99.46 True fake: scaffold gap size wrong estimation (local) 62233885 62236103 276076 278294 NC_000014.9 velvet.60516 99.86 True fake: scaffold gap size wrong estimation (local) 62236341 62245001 279237 288006 NC_000014.9 velvet.60516 99.8 True fake: scaffold gap size wrong estimation (local) 62246839 62254404 290932 298571 NC_000014.9 velvet.60516 99.96 True relocation, scaffold gap is present, inconsistency = 17092991 79348648 79356764 307924 299824 NC_000014.9 velvet.60516 99.79 True fake: scaffold gap size wrong estimation (local) 79347694 79348361 309410 308743 NC_000014.9 velvet.60516 100.0 True fake: not a misassembly (possible transposable element) 62254678 62255599 309421 310342 NC_000014.9 velvet.60516 99.78 True fake: not a misassembly (possible transposable element) 79346402 79347426 314300 313276 NC_000014.9 velvet.60516 99.9 True relocation, scaffold gap is present, inconsistency = 17083386 62255897 62263005 314311 321410 NC_000014.9 velvet.60516 99.62 True fake: not a misassembly (possible transposable element) 62283331 62284465 321568 322702 NC_000014.9 velvet.60516 99.21 True fake: not a misassembly (possible transposable element) 62263305 62264063 322713 323471 NC_000014.9 velvet.60516 99.47 True fake: scaffold gap size wrong estimation (local) 62264346 62264956 323797 324407 NC_000014.9 velvet.60516 99.84 True fake: scaffold gap size wrong estimation (local) 62265216 62277257 325213 337254 NC_000014.9 velvet.60516 99.88 True fake: scaffold gap size wrong estimation (local) 62277511 62282697 338316 343502 NC_000014.9 velvet.60516 99.85 True fake: scaffold gap size wrong estimation (local) 62288719 62293514 346478 351474 NC_000014.9 velvet.60516 95.58 True fake: scaffold gap size wrong estimation (local) 62293788 62300062 352483 358757 NC_000014.9 velvet.60516 99.87 True fake: scaffold gap size wrong estimation (local) 62300264 62303353 359723 362812 NC_000014.9 velvet.60516 99.87 True fake: scaffold gap size wrong estimation (extensive) 62312958 62323760 363028 373933 NC_000014.9 velvet.60516 99.92 True relocation, scaffold gap is present, inconsistency = -15608 62329207 62331844 394988 397624 NC_000014.9 velvet.60516 99.51 True fake: scaffold gap size wrong estimation (local) 62331978 62342457 398553 409082 NC_000014.9 velvet.60516 99.52 True fake: scaffold gap size wrong estimation (local) 62342725 62344245 410114 411634 NC_000014.9 velvet.60516 100.0 True fake: scaffold gap size wrong estimation (local) 62345475 62351035 413638 419193 NC_000014.9 velvet.60516 99.66 True fake: scaffold gap size wrong estimation (local) 62351940 62363317 420894 433028 NC_000014.9 velvet.60516 99.55 True relocation, scaffold gap is present, inconsistency = 30050625 92424731 92425732 443817 444816 NC_000014.9 velvet.60516 99.8 True fake: scaffold gap size wrong estimation (local) 92425803 92434797 445581 455262 NC_000014.9 velvet.60516 98.71 True fake: scaffold gap size wrong estimation (local) 92435066 92436419 456313 457666 NC_000014.9 velvet.60516 100.0 True fake: not a misassembly (possible transposable element) 68200888 68202540 458785 460437 NC_000014.9 velvet.60516 100.0 True fake: not a misassembly (possible transposable element) 92438536 92444600 460448 466504 NC_000014.9 velvet.60516 99.87 True relocation, scaffold gap is present, inconsistency = -12970757 79473854 79485981 466515 478642 NC_000014.9 velvet.60516 99.93 True relocation, scaffold gap is present, inconsistency = 13419021 92905013 92906529 480169 478653 NC_000014.9 velvet.60516 99.93 True fake: scaffold gap size wrong estimation (local) 92902386 92904797 483482 481071 NC_000014.9 velvet.60516 99.96 True relocation, scaffold gap is present, inconsistency = 13374040 79509616 79511942 499886 502212 NC_000014.9 velvet.60516 99.96 True fake: scaffold gap size wrong estimation (local) 79512163 79517919 503271 509026 NC_000014.9 velvet.60516 99.97 True relocation, scaffold gap is present, inconsistency = -17934 79499996 79504629 509037 513889 NC_000014.9 velvet.60516 99.91 True fake: scaffold gap size wrong estimation (local) 79505247 79508406 515320 518479 NC_000014.9 velvet.60516 100.0 True relocation, scaffold gap is present, inconsistency = 12873685 92383280 92385253 519668 521641 NC_000014.9 velvet.60516 100.0 True relocation, scaffold gap is present, inconsistency = -24741373 67643891 67644745 521652 522506 NC_000014.9 velvet.60516 99.88 True fake: scaffold gap size wrong estimation (local) 67645025 67648283 523729 526987 NC_000014.9 velvet.60516 99.94 True relocation, scaffold gap is present, inconsistency = 24737233 92385527 92387194 526998 528665 NC_000014.9 velvet.60516 100.0 True fake: not a misassembly (possible transposable element) 92294381 92295181 533598 532798 NC_000014.9 velvet.60516 99.88 True fake: not a misassembly (possible transposable element) 92396119 92400015 533609 537505 NC_000014.9 velvet.60516 100.0 True fake: scaffold gap size wrong estimation (local) 92400471 92402752 538769 541050 NC_000014.9 velvet.60516 99.91 True fake: not a misassembly (possible transposable element) 92285019 92287269 543310 541061 NC_000014.9 velvet.60516 99.47 True fake: not a misassembly (possible transposable element) 92403638 92405880 547396 549638 NC_000014.9 velvet.60516 99.96 True fake: scaffold gap size wrong estimation (extensive) 92415757 92416905 549649 550801 NC_000014.9 velvet.60516 99.57 True relocation, scaffold gap is present, inconsistency = 15797020 76615452 76618572 554086 550966 NC_000014.9 velvet.60516 99.94 True local misassembly 76618888 76619863 555072 554097 NC_000014.9 velvet.60516 100.0 True relocation, scaffold gap is present, inconsistency = 15797148 92417022 92418737 555083 556798 NC_000014.9 velvet.60516 100.0 True relocation, scaffold gap is present, inconsistency = -24740908 67677840 67679419 556809 558388 NC_000014.9 velvet.60516 99.87 True fake: scaffold gap size wrong estimation (local) 67679707 67680521 559321 560135 NC_000014.9 velvet.60516 100.0 True relocation, scaffold gap is present, inconsistency = 38006860 29669851 29671581 563131 561401 NC_000014.9 velvet.60516 100.0 True relocation, scaffold gap is present, inconsistency = 62734424 92408208 92409856 565334 566982 NC_000014.9 velvet.60516 99.94 True relocation, scaffold gap is present, inconsistency = 122732 92278680 92284731 574141 567727 NC_000014.9 velvet.60516 99.92 True fake: scaffold gap size wrong estimation (local) 92269851 92272520 577700 575031 NC_000014.9 velvet.60516 99.63 True fake: scaffold gap size wrong estimation (local) 92243201 92245574 607398 605025 NC_000014.9 velvet.60516 99.83 True relocation, scaffold gap is present, inconsistency = 12867 92223964 92225891 613768 611841 NC_000014.9 velvet.60516 99.95 True fake: scaffold gap size wrong estimation (local) 92222235 92223703 616348 614880 NC_000014.9 velvet.60516 99.8 True relocation, scaffold gap is present, inconsistency = -10839 92206582 92208544 642842 640878 NC_000014.9 velvet.60516 99.8 True fake: scaffold gap size wrong estimation (local) 92201592 92205669 648591 644514 NC_000014.9 velvet.60516 99.83 True fake: scaffold gap size wrong estimation (local) 92200400 92201254 649809 648955 NC_000014.9 velvet.60516 99.88 True fake: scaffold gap size wrong estimation (local) 92199309 92200399 651450 650360 NC_000014.9 velvet.60516 99.82 True fake: scaffold gap size wrong estimation (local) 92198546 92199161 652476 651861 NC_000014.9 velvet.60516 98.38 True fake: scaffold gap size wrong estimation (local) 92196640 92197706 654823 653757 NC_000014.9 velvet.60516 99.91 True fake: scaffold gap size wrong estimation (local) 92195441 92196315 656218 655344 NC_000014.9 velvet.60516 96.46 True fake: scaffold gap size wrong estimation (local) 92192312 92194071 659585 657826 NC_000014.9 velvet.60516 99.94 True relocation, scaffold gap is present, inconsistency = 60585 92130048 92131621 659691 661264 NC_000014.9 velvet.60516 99.94 True relocation, scaffold gap is present, inconsistency = -9609 92122023 92122848 661275 662100 NC_000014.9 velvet.60516 100.0 True fake: scaffold gap size wrong estimation (local) 92123658 92126573 662468 665383 NC_000014.9 velvet.60516 99.59 True fake: scaffold gap size wrong estimation (local) 92126784 92128114 666476 667806 NC_000014.9 velvet.60516 100.0 True relocation, scaffold gap is present, inconsistency = 70783203 21339409 21340384 671978 671003 NC_000014.9 velvet.60516 99.9 True inversion, scaffold gap is present 21346467 21348680 673646 675890 NC_000014.9 velvet.60516 97.95 True fake: scaffold gap size wrong estimation (local) 21355549 21356926 677157 678534 NC_000014.9 velvet.60516 99.93 True relocation, scaffold gap is present, inconsistency = -7760 21350422 21354625 679790 683993 NC_000014.9 velvet.60516 99.98 True relocation, scaffold gap is present, inconsistency = 70774840 92133749 92135978 688277 690543 NC_000014.9 velvet.60516 98.02 True relocation, scaffold gap is present, inconsistency = 11569 92168798 92169642 712638 711794 NC_000014.9 velvet.60516 100.0 True fake: scaffold gap size wrong estimation (local) 92160236 92162922 715614 712928 NC_000014.9 velvet.60516 99.96 True fake: scaffold gap size wrong estimation (local) 92157521 92159432 719146 717235 NC_000014.9 velvet.60516 100.0 True relocation, scaffold gap is present, inconsistency = 106093 92266067 92266631 719688 720252 NC_000014.9 velvet.60516 100.0 True local misassembly 92267124 92267783 720502 721161 NC_000014.9 velvet.60516 98.48 True fake: scaffold gap size wrong estimation (local) 92273249 92274235 721793 722779 NC_000014.9 velvet.60516 100.0 True fake: scaffold gap size wrong estimation (local) 92274903 92278458 725758 729313 NC_000014.9 velvet.60516 98.51 True inversion, scaffold gap is present 92305811 92306354 755799 755251 NC_000014.9 velvet.60516 99.09 True relocation, scaffold gap is present, inconsistency = 9706 92295231 92296094 755810 756673 NC_000014.9 velvet.60516 100.0 True fake: not a misassembly (possible transposable element) 92387362 92393537 762760 756684 NC_000014.9 velvet.60516 98.38 True fake: not a misassembly (possible transposable element) 92306415 92315908 762771 772268 NC_000014.9 velvet.60516 99.83 True fake: scaffold gap size wrong estimation (local) 92316202 92319630 773358 776786 NC_000014.9 velvet.60516 99.8 True fake: scaffold gap size wrong estimation (local) 92319940 92323187 777869 781113 NC_000014.9 velvet.60516 99.69 True fake: scaffold gap size wrong estimation (local) 92323363 92329781 782074 788494 NC_000014.9 velvet.60516 99.75 True relocation, scaffold gap is present, inconsistency = -12892737 79437447 79441390 788897 792840 NC_000014.9 velvet.60516 100.0 True local misassembly 79435918 79437428 792851 794361 NC_000014.9 velvet.60516 100.0 True fake: scaffold gap size wrong estimation (local) 79441677 79445097 794372 797792 NC_000014.9 velvet.60516 99.94 True relocation, scaffold gap is present, inconsistency = 12771768 92241167 92242353 823280 822094 NC_000014.9 velvet.60516 99.92 True fake: scaffold gap size wrong estimation (local) 92237514 92241015 828220 824304 NC_000014.9 velvet.60516 99.51 True fake: scaffold gap size wrong estimation (local) 92233491 92237078 832750 829163 NC_000014.9 velvet.60516 99.89 True relocation, scaffold gap is present, inconsistency = 123308 92360397 92363591 832761 835963 NC_000014.9 velvet.60516 99.31 True fake: scaffold gap size wrong estimation (local) 92368365 92373046 837304 841915 NC_000014.9 velvet.60516 98.27 True relocation, scaffold gap is present, inconsistency = -9195 92363862 92368333 841926 846397 NC_000014.9 velvet.60516 99.71 True fake: scaffold gap size wrong estimation (local) 92373348 92381064 846408 854124 NC_000014.9 velvet.60516 99.86 True fake: scaffold gap size wrong estimation (local) 92381563 92383248 855411 857096 NC_000014.9 velvet.60516 99.88 True relocation, scaffold gap is present, inconsistency = -47592 92335667 92339059 857107 860499 NC_000014.9 velvet.60516 99.94 True relocation, scaffold gap is present, inconsistency = -9280 92329797 92331440 860517 862161 NC_000014.9 velvet.60516 99.76 True relocation, scaffold gap is present, inconsistency = -12869072 79462637 79466343 862430 866136 NC_000014.9 velvet.60516 99.95 True relocation, scaffold gap is present, inconsistency = 12879380 92345734 92347676 866147 868089 NC_000014.9 velvet.60516 100.0 True relocation, scaffold gap is present, inconsistency = 7011 92355075 92358691 872093 868477 NC_000014.9 velvet.60516 99.59 True relocation, scaffold gap is present, inconsistency = 12892546 79456728 79462117 872505 877955 NC_000014.9 velvet.60516 99.98 True CONTIG velvet.60516 878016 misassembled 63388405 63389145 741 1 NC_000014.9 velvet.60517 100.0 True fake: scaffold gap size wrong estimation (local) 63386925 63388093 2679 1511 NC_000014.9 velvet.60517 100.0 True fake: scaffold gap size wrong estimation (local) 63385260 63386636 4598 3222 NC_000014.9 velvet.60517 99.93 True fake: scaffold gap size wrong estimation (extensive) 63347219 63348090 35128 34257 NC_000014.9 velvet.60517 98.85 True fake: scaffold gap size wrong estimation (local) 63341504 63347069 42028 36463 NC_000014.9 velvet.60517 99.17 True fake: scaffold gap size wrong estimation (extensive) 63326637 63333107 48598 42128 NC_000014.9 velvet.60517 99.91 True relocation, scaffold gap is present, inconsistency = 42189949 105524344 105525133 49886 50675 NC_000014.9 velvet.60517 100.0 True local misassembly 105525381 105526526 50676 51821 NC_000014.9 velvet.60517 96.6 True fake: scaffold gap size wrong estimation (local) 105526842 105535390 53085 61630 NC_000014.9 velvet.60517 99.93 True fake: scaffold gap size wrong estimation (local) 105535983 105538392 63014 65423 NC_000014.9 velvet.60517 99.96 True relocation, scaffold gap is present, inconsistency = -42190259 63348144 63350608 65434 67898 NC_000014.9 velvet.60517 100.0 True relocation, scaffold gap is present, inconsistency = 42172253 105523094 105523832 68131 68869 NC_000014.9 velvet.60517 100.0 True relocation, scaffold gap is present, inconsistency = 9641 105501472 105502022 80851 80300 NC_000014.9 velvet.60517 99.82 True fake: not a misassembly (possible transposable element) 33122898 33123822 82039 81115 NC_000014.9 velvet.60517 99.89 True fake: not a misassembly (possible transposable element) 105495132 105501111 88214 82235 NC_000014.9 velvet.60517 99.82 True relocation, scaffold gap is present, inconsistency = 42132584 63357520 63359648 91114 93242 NC_000014.9 velvet.60517 100.0 True fake: scaffold gap size wrong estimation (local) 63359931 63370698 94252 105019 NC_000014.9 velvet.60517 99.98 True relocation, scaffold gap is present, inconsistency = 42121961 105494016 105494881 107241 106376 NC_000014.9 velvet.60517 100.0 True fake: scaffold gap size wrong estimation (local) 105479976 105493932 121498 107419 NC_000014.9 velvet.60517 99.89 True fake: scaffold gap size wrong estimation (local) 105462858 105474583 139796 128071 NC_000014.9 velvet.60517 99.59 True fake: scaffold gap size wrong estimation (local) 105460216 105462110 143577 141683 NC_000014.9 velvet.60517 99.95 True fake: scaffold gap size wrong estimation (local) 105452574 105453402 145615 144787 NC_000014.9 velvet.60517 99.88 True local misassembly 105457929 105458972 146780 145737 NC_000014.9 velvet.60517 99.62 True relocation, scaffold gap is present, inconsistency = 54904826 50548782 50552459 151101 147424 NC_000014.9 velvet.60517 99.75 True relocation, scaffold gap is present, inconsistency = 12824689 63377159 63379043 151112 152992 NC_000014.9 velvet.60517 99.79 True fake: scaffold gap size wrong estimation (local) 63380685 63381549 155265 156129 NC_000014.9 velvet.60517 98.27 True indel: indel (<= 5bp) 63381550 63382416 156132 156998 NC_000014.9 velvet.60517 100.0 True fake: scaffold gap size wrong estimation (local) 63382703 63384800 158195 160292 NC_000014.9 velvet.60517 100.0 True fake: scaffold gap size wrong estimation (local) 63391725 63393478 160899 162652 NC_000014.9 velvet.60517 100.0 True fake: scaffold gap size wrong estimation (local) 63394355 63395491 164306 165442 NC_000014.9 velvet.60517 99.12 True fake: scaffold gap size wrong estimation (local) 63396420 63397255 167456 168291 NC_000014.9 velvet.60517 100.0 True fake: scaffold gap size wrong estimation (local) 63398025 63398552 168675 169202 NC_000014.9 velvet.60517 100.0 True fake: scaffold gap size wrong estimation (local) 63398749 63399385 170126 170762 NC_000014.9 velvet.60517 100.0 True fake: scaffold gap size wrong estimation (local) 63403669 63406159 170773 173263 NC_000014.9 velvet.60517 100.0 True fake: scaffold gap size wrong estimation (local) 63406442 63408870 174344 176772 NC_000014.9 velvet.60517 100.0 True fake: scaffold gap size wrong estimation (local) 63409424 63416727 178092 185476 NC_000014.9 velvet.60517 100.0 True relocation, scaffold gap is present, inconsistency = 12882999 50525747 50526353 186154 185548 NC_000014.9 velvet.60517 99.01 True fake: scaffold gap size wrong estimation (local) 50523293 50525579 188647 186361 NC_000014.9 velvet.60517 99.91 True fake: scaffold gap size wrong estimation (local) 50521091 50523025 191713 189779 NC_000014.9 velvet.60517 99.9 True relocation, scaffold gap is present, inconsistency = 12901654 63424766 63429860 191800 197080 NC_000014.9 velvet.60517 99.92 True fake: scaffold gap size wrong estimation (local) 63430424 63431017 198029 198622 NC_000014.9 velvet.60517 98.32 True fake: scaffold gap size wrong estimation (local) 63431296 63432052 199225 199981 NC_000014.9 velvet.60517 100.0 True relocation, scaffold gap is present, inconsistency = 42022085 105455011 105457693 203503 200855 NC_000014.9 velvet.60517 98.36 True fake: scaffold gap size wrong estimation (local) 105444791 105451752 210477 203514 NC_000014.9 velvet.60517 99.87 True fake: scaffold gap size wrong estimation (local) 105442832 105443465 216121 215488 NC_000014.9 velvet.60517 99.37 True fake: scaffold gap size wrong estimation (local) 105441778 105442642 217115 216251 NC_000014.9 velvet.60517 99.54 True fake: scaffold gap size wrong estimation (local) 105436247 105441525 223523 218394 NC_000014.9 velvet.60517 97.04 True fake: scaffold gap size wrong estimation (local) 105434775 105435926 225645 224494 NC_000014.9 velvet.60517 99.83 True fake: scaffold gap size wrong estimation (local) 105432510 105433870 228617 227257 NC_000014.9 velvet.60517 99.56 True fake: scaffold gap size wrong estimation (local) 105430022 105431164 232041 230899 NC_000014.9 velvet.60517 99.65 True fake: scaffold gap size wrong estimation (local) 105428768 105429303 233454 232919 NC_000014.9 velvet.60517 99.44 True fake: scaffold gap size wrong estimation (local) 105424766 105427733 241687 235034 NC_000014.9 velvet.60517 97.86 True fake: scaffold gap size wrong estimation (local) 105423573 105424201 242674 242046 NC_000014.9 velvet.60517 100.0 True fake: scaffold gap size wrong estimation (local) 105420313 105423209 246950 244014 NC_000014.9 velvet.60517 99.93 True fake: scaffold gap size wrong estimation (local) 105417670 105419775 250413 248308 NC_000014.9 velvet.60517 99.86 True fake: scaffold gap size wrong estimation (local) 105410360 105416847 258850 251873 NC_000014.9 velvet.60517 98.37 True fake: scaffold gap size wrong estimation (local) 105408686 105409484 261442 260644 NC_000014.9 velvet.60517 98.62 True fake: scaffold gap size wrong estimation (local) 105405286 105406660 265318 263944 NC_000014.9 velvet.60517 99.42 True fake: scaffold gap size wrong estimation (local) 105402758 105405024 268382 266115 NC_000014.9 velvet.60517 99.78 True fake: scaffold gap size wrong estimation (local) 105396769 105401388 275140 270521 NC_000014.9 velvet.60517 99.98 True fake: scaffold gap size wrong estimation (local) 105394038 105396483 278756 276311 NC_000014.9 velvet.60517 100.0 True fake: scaffold gap size wrong estimation (local) 105378970 105393575 294578 280070 NC_000014.9 velvet.60517 99.32 True relocation, scaffold gap is present, inconsistency = 46576 105322567 105330099 296873 304264 NC_000014.9 velvet.60517 98.13 True fake: scaffold gap size wrong estimation (local) 105330338 105331017 304944 305623 NC_000014.9 velvet.60517 100.0 True fake: scaffold gap size wrong estimation (local) 105331491 105335349 306626 310484 NC_000014.9 velvet.60517 99.97 True fake: scaffold gap size wrong estimation (local) 105335470 105339460 311494 315484 NC_000014.9 velvet.60517 99.97 True relocation, scaffold gap is present, inconsistency = 24269 105366285 105370211 321966 318040 NC_000014.9 velvet.60517 99.95 True fake: scaffold gap size wrong estimation (local) 105364956 105366064 323999 322891 NC_000014.9 velvet.60517 100.0 True fake: scaffold gap size wrong estimation (local) 105362815 105364172 326699 325342 NC_000014.9 velvet.60517 99.71 True inversion, scaffold gap is present 105370863 105372653 340076 341866 NC_000014.9 velvet.60517 100.0 True fake: scaffold gap size wrong estimation (local) 105372933 105373646 342976 343689 NC_000014.9 velvet.60517 100.0 True fake: scaffold gap size wrong estimation (local) 105374177 105375038 344065 344926 NC_000014.9 velvet.60517 98.84 True fake: scaffold gap size wrong estimation (local) 105375513 105378896 346254 349619 NC_000014.9 velvet.60517 99.47 True CONTIG velvet.60517 349619 misassembled 94953618 94954612 1 995 NC_000014.9 velvet.60518 99.8 True CONTIG velvet.60518 995 correct CONTIG velvet.60550 267 unaligned 87592531 87598358 1 5828 NC_000014.9 velvet.60567 99.88 True fake: scaffold gap size wrong estimation (local) 87598559 87605233 6729 13403 NC_000014.9 velvet.60567 99.91 True relocation, scaffold gap is present, inconsistency = 6807917 94417552 94418069 18322 17805 NC_000014.9 velvet.60567 100.0 True relocation, scaffold gap is present, inconsistency = -9983801 104395612 104401113 24021 18562 NC_000014.9 velvet.60567 99.0 True relocation, scaffold gap is present, inconsistency = 153100 104235572 104241115 25418 31206 NC_000014.9 velvet.60567 99.38 True fake: scaffold gap size wrong estimation (local) 104243053 104250830 33995 42728 NC_000014.9 velvet.60567 99.81 True local misassembly 104252100 104255570 42729 46505 NC_000014.9 velvet.60567 99.94 True fake: scaffold gap size wrong estimation (local) 104255666 104265299 47136 56768 NC_000014.9 velvet.60567 99.01 True relocation, scaffold gap is present, inconsistency = 59550565 44699284 44705089 63484 56780 NC_000014.9 velvet.60567 99.81 True fake: scaffold gap size wrong estimation (extensive) 44672794 44673524 81216 80502 NC_000014.9 velvet.60567 97.78 True relocation, scaffold gap is present, inconsistency = 16440198 61119038 61122902 86532 90512 NC_000014.9 velvet.60567 96.82 True fake: not a misassembly (possible transposable element) 60194854 60199725 95503 90624 NC_000014.9 velvet.60567 99.96 True fake: not a misassembly (possible transposable element) 61123198 61124942 95682 97426 NC_000014.9 velvet.60567 99.77 True fake: scaffold gap size wrong estimation (local) 61125091 61133126 98251 106424 NC_000014.9 velvet.60567 99.9 True relocation, scaffold gap is present, inconsistency = 7151 61144840 61151655 117801 110987 NC_000014.9 velvet.60567 99.94 True relocation, scaffold gap is present, inconsistency = 36676754 97830290 97830848 119682 120232 NC_000014.9 velvet.60567 98.0 True relocation, scaffold gap is present, inconsistency = -37587531 60243879 60244666 120794 121581 NC_000014.9 velvet.60567 100.0 True fake: scaffold gap size wrong estimation (local) 60244894 60247385 122864 125355 NC_000014.9 velvet.60567 100.0 True fake: scaffold gap size wrong estimation (local) 60249785 60255171 125366 131574 NC_000014.9 velvet.60567 99.98 True fake: scaffold gap size wrong estimation (local) 60255476 60256169 131982 132675 NC_000014.9 velvet.60567 100.0 True relocation, scaffold gap is present, inconsistency = 13292 60279389 60280096 143305 142603 NC_000014.9 velvet.60567 99.15 True fake: scaffold gap size wrong estimation (local) 60275847 60279162 147283 143912 NC_000014.9 velvet.60567 99.97 True fake: scaffold gap size wrong estimation (local) 60269814 60272026 149614 147402 NC_000014.9 velvet.60567 100.0 True inversion, scaffold gap is present 60280306 60284388 151594 155676 NC_000014.9 velvet.60567 100.0 True fake: scaffold gap size wrong estimation (local) 60284738 60305023 156798 177566 NC_000014.9 velvet.60567 100.0 True fake: scaffold gap size wrong estimation (local) 60305135 60307504 178577 180861 NC_000014.9 velvet.60567 96.31 True fake: scaffold gap size wrong estimation (local) 60307713 60312055 181870 186212 NC_000014.9 velvet.60567 100.0 True fake: scaffold gap size wrong estimation (local) 60319481 60325243 196108 201895 NC_000014.9 velvet.60567 99.93 True fake: scaffold gap size wrong estimation (local) 60325959 60329890 203504 207435 NC_000014.9 velvet.60567 100.0 True fake: scaffold gap size wrong estimation (local) 60330079 60332493 208406 210857 NC_000014.9 velvet.60567 100.0 True fake: scaffold gap size wrong estimation (local) 60332857 60334035 211790 212968 NC_000014.9 velvet.60567 99.32 True fake: scaffold gap size wrong estimation (local) 60343159 60349149 216306 222373 NC_000014.9 velvet.60567 99.98 True fake: not a misassembly (possible transposable element) 60236916 60237464 222649 223196 NC_000014.9 velvet.60567 97.81 True fake: not a misassembly (possible transposable element) 60349423 60364772 223354 238864 NC_000014.9 velvet.60567 99.39 True fake: scaffold gap size wrong estimation (local) 60365176 60367682 240086 242592 NC_000014.9 velvet.60567 100.0 True relocation, scaffold gap is present, inconsistency = -127627 60240270 60243656 242807 246193 NC_000014.9 velvet.60567 100.0 True fake: scaffold gap size wrong estimation (local) 60247662 60249364 246585 248287 NC_000014.9 velvet.60567 100.0 True relocation, scaffold gap is present, inconsistency = 126582 60388604 60391387 260945 263728 NC_000014.9 velvet.60567 100.0 True local misassembly 60387689 60388599 263739 264648 NC_000014.9 velvet.60567 99.67 True fake: scaffold gap size wrong estimation (local) 60391436 60393787 264659 267759 NC_000014.9 velvet.60567 96.18 True fake: scaffold gap size wrong estimation (local) 60394113 60394816 268089 268792 NC_000014.9 velvet.60567 99.29 True fake: scaffold gap size wrong estimation (local) 60395727 60402477 270540 277541 NC_000014.9 velvet.60567 100.0 True fake: scaffold gap size wrong estimation (local) 60402767 60404870 278604 280707 NC_000014.9 velvet.60567 100.0 True fake: scaffold gap size wrong estimation (local) 60408493 60412179 285511 290410 NC_000014.9 velvet.60567 99.72 True relocation, scaffold gap is present, inconsistency = -77875 60334315 60336339 290421 292445 NC_000014.9 velvet.60567 100.0 True fake: scaffold gap size wrong estimation (local) 60338241 60340002 295049 296810 NC_000014.9 velvet.60567 100.0 True fake: scaffold gap size wrong estimation (extensive) 60367889 60368778 315908 316797 NC_000014.9 velvet.60567 100.0 True fake: scaffold gap size wrong estimation (local) 60368996 60370563 317418 319029 NC_000014.9 velvet.60567 99.87 True fake: scaffold gap size wrong estimation (local) 60370695 60374629 319656 323518 NC_000014.9 velvet.60567 97.96 True fake: scaffold gap size wrong estimation (local) 60374900 60377420 324742 327262 NC_000014.9 velvet.60567 99.96 True fake: scaffold gap size wrong estimation (local) 60377716 60378689 328969 329942 NC_000014.9 velvet.60567 100.0 True local misassembly 60378981 60380039 329943 331001 NC_000014.9 velvet.60567 99.06 True fake: scaffold gap size wrong estimation (local) 60380781 60382414 332871 334540 NC_000014.9 velvet.60567 99.87 True fake: scaffold gap size wrong estimation (local) 60412422 60413589 366595 367762 NC_000014.9 velvet.60567 99.83 True local misassembly 60413807 60414685 368115 368995 NC_000014.9 velvet.60567 99.77 True fake: scaffold gap size wrong estimation (local) 60414979 60416585 369377 370983 NC_000014.9 velvet.60567 100.0 True fake: scaffold gap size wrong estimation (local) 60416865 60418220 372254 373609 NC_000014.9 velvet.60567 100.0 True fake: scaffold gap size wrong estimation (local) 60418537 60419257 373935 374655 NC_000014.9 velvet.60567 99.86 True fake: scaffold gap size wrong estimation (local) 60419475 60421174 375684 377383 NC_000014.9 velvet.60567 100.0 True fake: scaffold gap size wrong estimation (local) 60449161 60449968 401199 402006 NC_000014.9 velvet.60567 100.0 True fake: scaffold gap size wrong estimation (local) 60450056 60451187 402137 403268 NC_000014.9 velvet.60567 100.0 True fake: scaffold gap size wrong estimation (local) 60452197 60452744 404606 405153 NC_000014.9 velvet.60567 99.45 True indel: indel (<= 5bp) 60452745 60456426 405157 408838 NC_000014.9 velvet.60567 99.78 True indel: indel (<= 5bp) 60456427 60462211 408840 414624 NC_000014.9 velvet.60567 99.86 True indel: indel (> 5bp) 60462221 60462762 414625 415166 NC_000014.9 velvet.60567 97.05 True local misassembly 60462763 60465851 418531 421619 NC_000014.9 velvet.60567 99.64 True indel: indel (> 5bp) 60465874 60467949 421620 423695 NC_000014.9 velvet.60567 100.0 True fake: scaffold gap size wrong estimation (local) 60468286 60469948 424258 425920 NC_000014.9 velvet.60567 99.88 True relocation, scaffold gap is present, inconsistency = 10451 60480410 60490322 435967 425931 NC_000014.9 velvet.60567 99.58 True inversion, scaffold gap is present 60469960 60472449 442721 445209 NC_000014.9 velvet.60567 99.8 True fake: scaffold gap size wrong estimation (local) 60478198 60480228 445226 447252 NC_000014.9 velvet.60567 99.46 True relocation, scaffold gap is present, inconsistency = -21754836 38726315 38744287 448175 466216 NC_000014.9 velvet.60567 99.55 True fake: scaffold gap size wrong estimation (local) 38744594 38748029 467251 470686 NC_000014.9 velvet.60567 99.97 True fake: not a misassembly (possible transposable element) 38749070 38755383 478920 472607 NC_000014.9 velvet.60567 99.95 True fake: not a misassembly (possible transposable element) 38755589 38757104 478931 480445 NC_000014.9 velvet.60567 99.87 True fake: scaffold gap size wrong estimation (local) 38758076 38764130 485667 491721 NC_000014.9 velvet.60567 99.95 True relocation, scaffold gap is present, inconsistency = 42730925 81496336 81499891 496653 493002 NC_000014.9 velvet.60567 97.32 True fake: scaffold gap size wrong estimation (local) 81493514 81495662 500155 498009 NC_000014.9 velvet.60567 99.91 True fake: scaffold gap size wrong estimation (local) 81492256 81493246 502494 501504 NC_000014.9 velvet.60567 98.99 True local misassembly 81490791 81492028 503732 502495 NC_000014.9 velvet.60567 100.0 True fake: scaffold gap size wrong estimation (local) 81487014 81490617 508359 504756 NC_000014.9 velvet.60567 100.0 True fake: not a misassembly (possible transposable element) 20529428 20530908 508370 509910 NC_000014.9 velvet.60567 96.04 True fake: not a misassembly (possible transposable element) 81485517 81486953 511347 509921 NC_000014.9 velvet.60567 99.3 True fake: scaffold gap size wrong estimation (extensive) 81470152 81470703 517431 516880 NC_000014.9 velvet.60567 100.0 True fake: scaffold gap size wrong estimation (local) 81467858 81468544 520190 519504 NC_000014.9 velvet.60567 100.0 True fake: scaffold gap size wrong estimation (local) 81466455 81467567 521827 520715 NC_000014.9 velvet.60567 99.91 True fake: scaffold gap size wrong estimation (local) 81465411 81466135 523524 522800 NC_000014.9 velvet.60567 99.72 True relocation, scaffold gap is present, inconsistency = 13043117 68420272 68422283 525546 523535 NC_000014.9 velvet.60567 99.8 True relocation, scaffold gap is present, inconsistency = 139290 68278006 68280971 528521 525557 NC_000014.9 velvet.60567 99.93 True fake: scaffold gap size wrong estimation (local) 68275816 68277794 531612 529634 NC_000014.9 velvet.60567 100.0 True inversion, scaffold gap is present 68282287 68289460 531623 538797 NC_000014.9 velvet.60567 99.92 True fake: scaffold gap size wrong estimation (local) 68289747 68290809 539643 540705 NC_000014.9 velvet.60567 100.0 True fake: scaffold gap size wrong estimation (local) 68291504 68300321 541999 550816 NC_000014.9 velvet.60567 99.89 True fake: scaffold gap size wrong estimation (local) 68301863 68302922 553076 554152 NC_000014.9 velvet.60567 97.68 True relocation, scaffold gap is present, inconsistency = 39663016 28632958 28635625 560139 557374 NC_000014.9 velvet.60567 99.92 True fake: scaffold gap size wrong estimation (local) 28630687 28632705 563237 561179 NC_000014.9 velvet.60567 99.75 True fake: not a misassembly (possible transposable element) 28629734 28630531 564132 564929 NC_000014.9 velvet.60567 99.75 True fake: not a misassembly (possible transposable element) 28625796 28629667 569112 564944 NC_000014.9 velvet.60567 98.8 True fake: scaffold gap size wrong estimation (local) 28617078 28625330 578978 570303 NC_000014.9 velvet.60567 99.9 True fake: scaffold gap size wrong estimation (local) 28611940 28616937 585274 579542 NC_000014.9 velvet.60567 99.81 True fake: scaffold gap size wrong estimation (local) 28602047 28609707 595626 587913 NC_000014.9 velvet.60567 99.24 True fake: scaffold gap size wrong estimation (local) 28593448 28601702 605467 596687 NC_000014.9 velvet.60567 99.99 True fake: scaffold gap size wrong estimation (local) 28588876 28593140 610398 606137 NC_000014.9 velvet.60567 99.91 True fake: scaffold gap size wrong estimation (local) 28587666 28588551 612064 611179 NC_000014.9 velvet.60567 98.87 True local misassembly 28579664 28582039 614440 612065 NC_000014.9 velvet.60567 100.0 True relocation, scaffold gap is present, inconsistency = -52881212 81459179 81459683 616137 615633 NC_000014.9 velvet.60567 100.0 True fake: not a misassembly (possible transposable element) 32187565 32188499 618131 619065 NC_000014.9 velvet.60567 100.0 True fake: not a misassembly (possible transposable element) 81456622 81457375 619829 619076 NC_000014.9 velvet.60567 99.47 True fake: not a misassembly (possible transposable element) 32189426 32190353 622384 623309 NC_000014.9 velvet.60567 99.78 True fake: not a misassembly (possible transposable element) 81452232 81453912 625035 623364 NC_000014.9 velvet.60567 99.34 True relocation, scaffold gap is present, inconsistency = 32864556 48575638 48584889 627822 637897 NC_000014.9 velvet.60567 98.93 True relocation, scaffold gap is present, inconsistency = 32856731 81441631 81445096 641330 637908 NC_000014.9 velvet.60567 98.73 True fake: scaffold gap size wrong estimation (local) 81431847 81436173 645667 641341 NC_000014.9 velvet.60567 100.0 True relocation, scaffold gap is present, inconsistency = -9535 81439741 81441371 647308 645678 NC_000014.9 velvet.60567 100.0 True fake: scaffold gap size wrong estimation (extensive) 81429937 81431354 648736 647319 NC_000014.9 velvet.60567 100.0 True relocation, scaffold gap is present, inconsistency = -9634 81438122 81439560 650185 648747 NC_000014.9 velvet.60567 100.0 True relocation, scaffold gap is present, inconsistency = 13083909 68349637 68354202 654761 650196 NC_000014.9 velvet.60567 99.89 True relocation, scaffold gap is present, inconsistency = 27742 68315823 68321884 654772 660844 NC_000014.9 velvet.60567 99.67 True relocation, scaffold gap is present, inconsistency = 35658 68357553 68361682 664921 660855 NC_000014.9 velvet.60567 98.42 True fake: scaffold gap size wrong estimation (local) 68354486 68356114 668773 667150 NC_000014.9 velvet.60567 99.63 True relocation, scaffold gap is present, inconsistency = 19798021 48552709 48556454 672529 668784 NC_000014.9 velvet.60567 99.89 True relocation, scaffold gap is present, inconsistency = 19765587 68322052 68323579 672540 674067 NC_000014.9 velvet.60567 99.74 True fake: scaffold gap size wrong estimation (local) 68323790 68325586 675256 677052 NC_000014.9 velvet.60567 99.94 True relocation, scaffold gap is present, inconsistency = 13155125 81480722 81481785 677063 678126 NC_000014.9 velvet.60567 100.0 True fake: scaffold gap size wrong estimation (local) 81482066 81485319 678877 682130 NC_000014.9 velvet.60567 100.0 True relocation, scaffold gap is present, inconsistency = -32869726 48615604 48617937 682141 684474 NC_000014.9 velvet.60567 99.87 True fake: scaffold gap size wrong estimation (local) 48617938 48622079 685253 689394 NC_000014.9 velvet.60567 99.2 True local misassembly 48625213 48628364 689395 692546 NC_000014.9 velvet.60567 99.56 True fake: scaffold gap size wrong estimation (local) 48655572 48658504 716700 719632 NC_000014.9 velvet.60567 99.9 True relocation, scaffold gap is present, inconsistency = 128092 48526636 48527250 720476 719862 NC_000014.9 velvet.60567 100.0 True fake: scaffold gap size wrong estimation (local) 48524634 48526472 722543 720705 NC_000014.9 velvet.60567 99.95 True fake: scaffold gap size wrong estimation (local) 48514714 48524444 733511 723548 NC_000014.9 velvet.60567 99.81 True fake: scaffold gap size wrong estimation (local) 48510523 48514600 738586 734412 NC_000014.9 velvet.60567 99.93 True fake: scaffold gap size wrong estimation (local) 48506683 48510251 743105 739537 NC_000014.9 velvet.60567 99.83 True fake: scaffold gap size wrong estimation (local) 48501795 48506474 748712 744033 NC_000014.9 velvet.60567 99.96 True fake: scaffold gap size wrong estimation (local) 48496756 48501553 754530 749733 NC_000014.9 velvet.60567 99.9 True fake: scaffold gap size wrong estimation (local) 48477745 48481502 776823 772994 NC_000014.9 velvet.60567 99.95 True fake: scaffold gap size wrong estimation (local) 48475673 48477606 779597 777654 NC_000014.9 velvet.60567 99.28 True fake: scaffold gap size wrong estimation (local) 48471778 48475378 783979 780419 NC_000014.9 velvet.60567 98.89 True fake: scaffold gap size wrong estimation (local) 48469064 48471493 787432 785003 NC_000014.9 velvet.60567 99.92 True inversion, scaffold gap is present 48460057 48468983 787443 796784 NC_000014.9 velvet.60567 98.2 True fake: scaffold gap size wrong estimation (local) 48486418 48487565 817230 818373 NC_000014.9 velvet.60567 99.65 True fake: scaffold gap size wrong estimation (local) 48487763 48493427 819397 825354 NC_000014.9 velvet.60567 99.59 True fake: scaffold gap size wrong estimation (local) 48527567 48531825 855445 859682 NC_000014.9 velvet.60567 99.34 True relocation, scaffold gap is present, inconsistency = -38455 48493447 48495106 859759 861418 NC_000014.9 velvet.60567 99.76 True fake: scaffold gap size wrong estimation (local) 48495218 48496759 861593 863188 NC_000014.9 velvet.60567 95.67 True CONTIG velvet.60567 863188 misassembled 72639082 72645310 6276 1 NC_000014.9 velvet.60581 99.95 True fake: scaffold gap size wrong estimation (local) 72632721 72638803 13422 7340 NC_000014.9 velvet.60581 99.74 True local misassembly 72626909 72632708 22040 16241 NC_000014.9 velvet.60581 99.5 True fake: scaffold gap size wrong estimation (local) 72624611 72626908 24504 22207 NC_000014.9 velvet.60581 100.0 True fake: scaffold gap size wrong estimation (local) 72614778 72618022 27759 24515 NC_000014.9 velvet.60581 99.88 True fake: scaffold gap size wrong estimation (local) 72599694 72613864 43991 29387 NC_000014.9 velvet.60581 99.87 True fake: scaffold gap size wrong estimation (local) 72597254 72599367 47126 45015 NC_000014.9 velvet.60581 99.39 True fake: scaffold gap size wrong estimation (local) 72593666 72596952 51556 48266 NC_000014.9 velvet.60581 99.7 True fake: scaffold gap size wrong estimation (local) 72589512 72593374 56450 52586 NC_000014.9 velvet.60581 99.82 True fake: scaffold gap size wrong estimation (local) 72569609 72586504 73440 56461 NC_000014.9 velvet.60581 99.92 True fake: not a misassembly (possible transposable element) 72586510 72589266 77385 74629 NC_000014.9 velvet.60581 99.82 True fake: not a misassembly (possible transposable element) 72560805 72566625 83482 77662 NC_000014.9 velvet.60581 99.78 True local misassembly 72556247 72560804 90486 85929 NC_000014.9 velvet.60581 99.74 True fake: scaffold gap size wrong estimation (local) 72550956 72556073 96481 91371 NC_000014.9 velvet.60581 99.84 True fake: scaffold gap size wrong estimation (local) 72549830 72550870 98172 97132 NC_000014.9 velvet.60581 100.0 True fake: scaffold gap size wrong estimation (local) 72543997 72549579 104349 98768 NC_000014.9 velvet.60581 99.93 True fake: scaffold gap size wrong estimation (local) 72531317 72543778 118604 105376 NC_000014.9 velvet.60581 99.28 True fake: scaffold gap size wrong estimation (local) 72526379 72530405 124318 120292 NC_000014.9 velvet.60581 99.93 True fake: scaffold gap size wrong estimation (local) 72515590 72526090 135999 125395 NC_000014.9 velvet.60581 99.99 True fake: scaffold gap size wrong estimation (local) 72509369 72515395 143200 137012 NC_000014.9 velvet.60581 99.98 True fake: scaffold gap size wrong estimation (local) 72507147 72509079 146123 144112 NC_000014.9 velvet.60581 99.89 True fake: scaffold gap size wrong estimation (local) 72505048 72506863 148885 147070 NC_000014.9 velvet.60581 99.94 True fake: scaffold gap size wrong estimation (local) 72502713 72504772 151854 149795 NC_000014.9 velvet.60581 99.95 True fake: scaffold gap size wrong estimation (local) 72490389 72502483 166013 152873 NC_000014.9 velvet.60581 99.86 True indel: indel (> 5bp) 72489165 72490349 167269 166085 NC_000014.9 velvet.60581 99.66 True fake: scaffold gap size wrong estimation (local) 72483969 72485926 169723 167768 NC_000014.9 velvet.60581 99.9 True relocation, scaffold gap is present, inconsistency = 40883543 31596182 31599907 175001 170242 NC_000014.9 velvet.60581 99.92 True fake: scaffold gap size wrong estimation (local) 31593515 31595917 178537 176146 NC_000014.9 velvet.60581 99.46 True relocation, scaffold gap is present, inconsistency = 22058 31569475 31571446 180519 178548 NC_000014.9 velvet.60581 99.85 True relocation, scaffold gap is present, inconsistency = 32258 31534952 31536081 181655 182784 NC_000014.9 velvet.60581 99.91 True relocation, scaffold gap is present, inconsistency = 37987108 69523200 69529253 188904 182795 NC_000014.9 velvet.60581 98.94 True relocation, scaffold gap is present, inconsistency = -855226 70375446 70378415 191884 188915 NC_000014.9 velvet.60581 99.63 True relocation, scaffold gap is present, inconsistency = 38815642 31551765 31559603 192085 199880 NC_000014.9 velvet.60581 99.43 True fake: not a misassembly (possible transposable element) 31564509 31568676 204058 199891 NC_000014.9 velvet.60581 99.83 True fake: not a misassembly (possible transposable element) 31560247 31562603 204069 206437 NC_000014.9 velvet.60581 98.95 True fake: scaffold gap size wrong estimation (local) 31562924 31564444 207557 209077 NC_000014.9 velvet.60581 100.0 True relocation, scaffold gap is present, inconsistency = 37940215 69507214 69507717 212135 211632 NC_000014.9 velvet.60581 100.0 True relocation, scaffold gap is present, inconsistency = -7631175 77125136 77138378 225901 212146 NC_000014.9 velvet.60581 99.57 True fake: scaffold gap size wrong estimation (local) 77120692 77125020 231206 226877 NC_000014.9 velvet.60581 99.88 True fake: scaffold gap size wrong estimation (local) 77119681 77120376 232701 232006 NC_000014.9 velvet.60581 100.0 True fake: scaffold gap size wrong estimation (local) 77115936 77118472 237090 234554 NC_000014.9 velvet.60581 99.88 True fake: scaffold gap size wrong estimation (local) 77112982 77115671 240862 238183 NC_000014.9 velvet.60581 99.51 True fake: scaffold gap size wrong estimation (local) 77108674 77112735 245991 241930 NC_000014.9 velvet.60581 100.0 True fake: scaffold gap size wrong estimation (local) 77102330 77108424 253169 246935 NC_000014.9 velvet.60581 99.79 True relocation, scaffold gap is present, inconsistency = -12934634 90034013 90034897 256120 255236 NC_000014.9 velvet.60581 99.77 True indel: indel (> 5bp) 90031634 90034012 258555 256177 NC_000014.9 velvet.60581 99.83 True fake: scaffold gap size wrong estimation (local) 90029769 90030752 260982 259999 NC_000014.9 velvet.60581 100.0 True fake: scaffold gap size wrong estimation (local) 90027195 90029184 264289 262300 NC_000014.9 velvet.60581 100.0 True fake: scaffold gap size wrong estimation (local) 90021054 90026456 271226 265824 NC_000014.9 velvet.60581 100.0 True fake: scaffold gap size wrong estimation (local) 90016315 90020471 276857 272630 NC_000014.9 velvet.60581 99.98 True fake: scaffold gap size wrong estimation (local) 90013978 90016038 280036 278023 NC_000014.9 velvet.60581 97.67 True relocation, scaffold gap is present, inconsistency = 25972 89981956 89985771 282271 286086 NC_000014.9 velvet.60581 99.97 True fake: scaffold gap size wrong estimation (local) 89986043 89990568 287164 291787 NC_000014.9 velvet.60581 99.98 True relocation, scaffold gap is present, inconsistency = 10067 90000646 90002679 293823 291798 NC_000014.9 velvet.60581 99.61 True fake: scaffold gap size wrong estimation (local) 89990550 90000438 305343 294750 NC_000014.9 velvet.60581 99.99 True relocation, scaffold gap is present, inconsistency = 2687340 87299598 87303199 305354 308936 NC_000014.9 velvet.60581 99.03 True relocation, scaffold gap is present, inconsistency = 65796522 21500364 21502971 311690 309041 NC_000014.9 velvet.60581 99.77 True fake: scaffold gap size wrong estimation (local) 21497799 21500078 315032 312753 NC_000014.9 velvet.60581 99.87 True fake: scaffold gap size wrong estimation (local) 21496423 21497500 317240 316163 NC_000014.9 velvet.60581 100.0 True fake: scaffold gap size wrong estimation (local) 21494981 21496024 318679 317636 NC_000014.9 velvet.60581 100.0 True fake: scaffold gap size wrong estimation (local) 21492267 21493406 322140 321001 NC_000014.9 velvet.60581 99.91 True relocation, scaffold gap is present, inconsistency = -38841 21521337 21527722 331970 325526 NC_000014.9 velvet.60581 99.92 True relocation, scaffold gap is present, inconsistency = -10212 21528140 21529550 335379 333969 NC_000014.9 velvet.60581 100.0 True relocation, scaffold gap is present, inconsistency = -55523509 77051014 77051638 336014 335390 NC_000014.9 velvet.60581 98.4 True fake: scaffold gap size wrong estimation (local) 77047927 77048684 340048 339245 NC_000014.9 velvet.60581 99.86 True fake: scaffold gap size wrong estimation (local) 77042950 77047089 346158 341867 NC_000014.9 velvet.60581 97.28 True fake: scaffold gap size wrong estimation (local) 77036348 77042701 353694 347174 NC_000014.9 velvet.60581 99.81 True fake: scaffold gap size wrong estimation (local) 77035220 77036074 355546 354697 NC_000014.9 velvet.60581 98.83 True relocation, scaffold gap is present, inconsistency = 55539571 21486230 21489583 365041 361612 NC_000014.9 velvet.60581 99.91 True relocation, scaffold gap is present, inconsistency = -68498110 89975351 89976130 374029 373251 NC_000014.9 velvet.60581 99.87 True relocation, scaffold gap is present, inconsistency = -10721210 100694249 100696550 376341 374040 NC_000014.9 velvet.60581 100.0 True local misassembly 100697447 100699571 378476 376352 NC_000014.9 velvet.60581 99.91 True fake: scaffold gap size wrong estimation (local) 100690588 100694185 382030 378487 NC_000014.9 velvet.60581 98.38 True relocation, scaffold gap is present, inconsistency = 23612304 77075579 77076845 384765 383469 NC_000014.9 velvet.60581 97.61 True fake: scaffold gap size wrong estimation (local) 77067633 77071007 388925 385023 NC_000014.9 velvet.60581 99.85 True fake: scaffold gap size wrong estimation (local) 77066171 77067408 391014 389777 NC_000014.9 velvet.60581 98.3 True fake: scaffold gap size wrong estimation (local) 77063225 77065489 394551 392287 NC_000014.9 velvet.60581 99.56 True local misassembly 77057930 77060001 396623 394552 NC_000014.9 velvet.60581 99.95 True relocation, scaffold gap is present, inconsistency = -15060751 92114059 92114691 401245 400613 NC_000014.9 velvet.60581 98.42 True local misassembly 92113345 92113936 401837 401246 NC_000014.9 velvet.60581 100.0 True fake: scaffold gap size wrong estimation (local) 92109433 92110771 406252 404914 NC_000014.9 velvet.60581 99.78 True fake: scaffold gap size wrong estimation (local) 92088342 92089039 421275 420578 NC_000014.9 velvet.60581 100.0 True fake: scaffold gap size wrong estimation (local) 92086641 92088038 423550 422153 NC_000014.9 velvet.60581 99.93 True fake: scaffold gap size wrong estimation (local) 92085381 92086135 425040 424286 NC_000014.9 velvet.60581 100.0 True fake: scaffold gap size wrong estimation (local) 92082843 92083768 428327 427402 NC_000014.9 velvet.60581 98.81 True fake: scaffold gap size wrong estimation (local) 92081484 92082611 430549 429422 NC_000014.9 velvet.60581 99.11 True relocation, scaffold gap is present, inconsistency = 14976479 77100839 77101731 434715 433823 NC_000014.9 velvet.60581 99.89 True fake: scaffold gap size wrong estimation (local) 77096817 77100227 439575 436165 NC_000014.9 velvet.60581 99.97 True fake: scaffold gap size wrong estimation (local) 77096057 77096566 441101 440592 NC_000014.9 velvet.60581 99.8 True fake: scaffold gap size wrong estimation (local) 77094569 77095921 442570 441218 NC_000014.9 velvet.60581 99.85 True fake: scaffold gap size wrong estimation (local) 77092389 77094293 445398 443494 NC_000014.9 velvet.60581 99.84 True fake: scaffold gap size wrong estimation (local) 77090799 77092139 447455 446115 NC_000014.9 velvet.60581 100.0 True fake: scaffold gap size wrong estimation (local) 77087923 77090243 451023 448672 NC_000014.9 velvet.60581 98.68 True fake: scaffold gap size wrong estimation (local) 77081887 77083722 457285 455450 NC_000014.9 velvet.60581 100.0 True fake: scaffold gap size wrong estimation (local) 77080991 77081658 460979 460311 NC_000014.9 velvet.60581 99.85 True fake: scaffold gap size wrong estimation (local) 77078093 77079277 464131 462899 NC_000014.9 velvet.60581 99.74 True relocation, scaffold gap is present, inconsistency = -10809 77084685 77087182 468348 465851 NC_000014.9 velvet.60581 99.96 True relocation, scaffold gap is present, inconsistency = -23255116 100336338 100338295 471811 469854 NC_000014.9 velvet.60581 99.69 True fake: scaffold gap size wrong estimation (local) 100332044 100335366 477032 473710 NC_000014.9 velvet.60581 99.97 True fake: scaffold gap size wrong estimation (local) 100328381 100331791 481529 478119 NC_000014.9 velvet.60581 99.82 True relocation, scaffold gap is present, inconsistency = 23844488 76480074 76483879 481543 485341 NC_000014.9 velvet.60581 99.76 True fake: not a misassembly (possible transposable element) 22530904 22534570 485352 489018 NC_000014.9 velvet.60581 100.0 True fake: not a misassembly (possible transposable element) 76489485 76493242 489029 492774 NC_000014.9 velvet.60581 99.47 True relocation, scaffold gap is present, inconsistency = 53994332 22471196 22491219 516731 496708 NC_000014.9 velvet.60581 99.94 True relocation, scaffold gap is present, inconsistency = 72088389 94579619 94585792 516742 522915 NC_000014.9 velvet.60581 99.89 True relocation, inconsistency = 1017349 95603173 95603782 522947 523556 NC_000014.9 velvet.60581 99.51 True relocation, scaffold gap is present, inconsistency = 6396068 89205152 89207094 525509 523567 NC_000014.9 velvet.60581 100.0 True relocation, scaffold gap is present, inconsistency = 29940470 59260057 59264671 525520 530197 NC_000014.9 velvet.60581 97.62 True relocation, scaffold gap is present, inconsistency = 35321127 94585809 94589194 530208 533593 NC_000014.9 velvet.60581 99.68 True relocation, scaffold gap is present, inconsistency = -35336501 59252704 59259789 533604 540689 NC_000014.9 velvet.60581 99.93 True relocation, scaffold gap is present, inconsistency = 36800028 22447329 22452665 546036 540700 NC_000014.9 velvet.60581 99.74 True local misassembly 22441634 22444105 548508 546037 NC_000014.9 velvet.60581 99.88 True relocation, scaffold gap is present, inconsistency = -206690 22643773 22647098 553059 549734 NC_000014.9 velvet.60581 99.97 True fake: scaffold gap size wrong estimation (local) 22610297 22614751 581647 576319 NC_000014.9 velvet.60581 99.86 True fake: scaffold gap size wrong estimation (local) 22578581 22579202 612116 611495 NC_000014.9 velvet.60581 99.2 True fake: scaffold gap size wrong estimation (local) 22577355 22577965 613341 612731 NC_000014.9 velvet.60581 99.84 True fake: scaffold gap size wrong estimation (local) 22566577 22568680 625124 623042 NC_000014.9 velvet.60581 98.95 True relocation, scaffold gap is present, inconsistency = 135945 22423400 22430621 625135 633168 NC_000014.9 velvet.60581 99.9 True fake: scaffold gap size wrong estimation (local) 22430855 22431507 634006 634658 NC_000014.9 velvet.60581 100.0 True fake: scaffold gap size wrong estimation (local) 22431650 22433807 635068 637225 NC_000014.9 velvet.60581 99.81 True relocation, scaffold gap is present, inconsistency = 141997 22575815 22576983 638404 637236 NC_000014.9 velvet.60581 100.0 True fake: scaffold gap size wrong estimation (local) 22574782 22575567 639953 639168 NC_000014.9 velvet.60581 98.6 True indel: indel (> 5bp) 22573728 22574751 640977 639954 NC_000014.9 velvet.60581 98.34 True fake: scaffold gap size wrong estimation (local) 22572203 22573148 643131 642186 NC_000014.9 velvet.60581 99.58 True fake: not a misassembly (possible transposable element) 22468500 22471189 643487 646266 NC_000014.9 velvet.60581 99.92 True fake: not a misassembly (possible transposable element) 22562703 22563276 657724 657151 NC_000014.9 velvet.60581 99.83 True relocation, scaffold gap is present, inconsistency = 17058 22580345 22581490 657735 658880 NC_000014.9 velvet.60581 99.91 True relocation, scaffold gap is present, inconsistency = -165850 22415873 22418472 659113 661712 NC_000014.9 velvet.60581 99.92 True relocation, scaffold gap is present, inconsistency = 40555 22461349 22462345 664034 665030 NC_000014.9 velvet.60581 100.0 True fake: scaffold gap size wrong estimation (local) 22462623 22468245 666602 672224 NC_000014.9 velvet.60581 100.0 True relocation, scaffold gap is present, inconsistency = 10484823 32953079 32957387 672235 677206 NC_000014.9 velvet.60581 99.98 True fake: scaffold gap size wrong estimation (local) 32957684 32961158 677469 681566 NC_000014.9 velvet.60581 99.68 True fake: scaffold gap size wrong estimation (local) 32961442 32962573 682556 683687 NC_000014.9 velvet.60581 100.0 True fake: scaffold gap size wrong estimation (local) 32962852 32964185 684254 685587 NC_000014.9 velvet.60581 100.0 True CONTIG velvet.60581 685587 misassembled 39211612 39213803 1 2254 NC_000014.9 velvet.60610 99.91 True fake: scaffold gap size wrong estimation (local) 39215029 39217170 4337 6478 NC_000014.9 velvet.60610 99.86 True fake: scaffold gap size wrong estimation (local) 39217708 39218743 7954 8989 NC_000014.9 velvet.60610 99.61 True fake: scaffold gap size wrong estimation (local) 39221040 39221775 12499 13234 NC_000014.9 velvet.60610 99.73 True fake: scaffold gap size wrong estimation (local) 39222390 39223368 14526 15504 NC_000014.9 velvet.60610 99.8 True local misassembly 39223635 39224724 15505 16594 NC_000014.9 velvet.60610 98.81 True fake: scaffold gap size wrong estimation (local) 39226515 39227059 19361 19905 NC_000014.9 velvet.60610 100.0 True relocation, scaffold gap is present, inconsistency = 4544621 43772050 43773614 21839 20275 NC_000014.9 velvet.60610 100.0 True fake: scaffold gap size wrong estimation (local) 43762592 43771761 32875 22871 NC_000014.9 velvet.60610 99.97 True relocation, scaffold gap is present, inconsistency = 4515246 39243872 39244797 35424 36349 NC_000014.9 velvet.60610 99.89 True fake: scaffold gap size wrong estimation (local) 39245234 39246106 36659 37531 NC_000014.9 velvet.60610 99.89 True fake: scaffold gap size wrong estimation (local) 39246398 39249199 38725 42006 NC_000014.9 velvet.60610 99.85 True fake: scaffold gap size wrong estimation (local) 39249569 39250335 43369 44135 NC_000014.9 velvet.60610 100.0 True fake: scaffold gap size wrong estimation (local) 39250742 39255277 44997 49532 NC_000014.9 velvet.60610 99.96 True relocation, scaffold gap is present, inconsistency = -27368 39227920 39232178 49543 54622 NC_000014.9 velvet.60610 97.78 True fake: not a misassembly (possible transposable element) 69751620 69752153 85060 85593 NC_000014.9 velvet.60610 99.81 True fake: not a misassembly (possible transposable element) 39264210 39269536 85604 91152 NC_000014.9 velvet.60610 98.67 True fake: scaffold gap size wrong estimation (local) 39270640 39271870 92801 94031 NC_000014.9 velvet.60610 99.19 True fake: scaffold gap size wrong estimation (extensive) 39279186 39280479 94260 95542 NC_000014.9 velvet.60610 98.99 True fake: scaffold gap size wrong estimation (local) 39301360 39305692 121780 126113 NC_000014.9 velvet.60610 99.84 True fake: scaffold gap size wrong estimation (local) 39305968 39307411 127064 128511 NC_000014.9 velvet.60610 99.86 True relocation, scaffold gap is present, inconsistency = -39298 39295003 39295609 155401 156007 NC_000014.9 velvet.60610 100.0 True fake: scaffold gap size wrong estimation (local) 39295862 39296523 156149 156810 NC_000014.9 velvet.60610 99.85 True fake: scaffold gap size wrong estimation (local) 39297384 39298415 158508 159519 NC_000014.9 velvet.60610 97.85 True fake: scaffold gap size wrong estimation (local) 39299524 39300608 161823 162907 NC_000014.9 velvet.60610 100.0 True local misassembly 39298589 39299088 162918 163417 NC_000014.9 velvet.60610 100.0 True fake: scaffold gap size wrong estimation (extensive) 39307716 39311323 164197 167802 NC_000014.9 velvet.60610 99.81 True fake: scaffold gap size wrong estimation (local) 39312125 39314132 169327 171390 NC_000014.9 velvet.60610 99.8 True fake: scaffold gap size wrong estimation (local) 39314417 39315030 172228 172829 NC_000014.9 velvet.60610 97.85 True fake: scaffold gap size wrong estimation (local) 39315336 39321336 173661 179661 NC_000014.9 velvet.60610 99.9 True fake: scaffold gap size wrong estimation (local) 39340139 39341072 195799 196732 NC_000014.9 velvet.60610 100.0 True fake: scaffold gap size wrong estimation (local) 39341343 39342076 196818 197551 NC_000014.9 velvet.60610 100.0 True fake: scaffold gap size wrong estimation (local) 39342612 39343217 199860 200465 NC_000014.9 velvet.60610 99.83 True local misassembly 39343441 39345100 200466 202125 NC_000014.9 velvet.60610 99.34 True fake: scaffold gap size wrong estimation (local) 39345369 39346772 203255 204658 NC_000014.9 velvet.60610 99.86 True fake: scaffold gap size wrong estimation (local) 39347036 39347841 204999 205804 NC_000014.9 velvet.60610 99.88 True fake: scaffold gap size wrong estimation (local) 39348099 39350709 206541 209712 NC_000014.9 velvet.60610 99.92 True fake: scaffold gap size wrong estimation (local) 39351000 39351751 210130 211016 NC_000014.9 velvet.60610 100.0 True CONTIG velvet.60610 211263 misassembled CONTIG velvet.60612 246 unaligned 33012719 33018947 6309 1 NC_000014.9 velvet.60658 99.77 True fake: scaffold gap size wrong estimation (local) 33010957 33012550 8779 6837 NC_000014.9 velvet.60658 99.49 True fake: scaffold gap size wrong estimation (local) 32999469 33010797 21595 9380 NC_000014.9 velvet.60658 99.34 True fake: scaffold gap size wrong estimation (local) 32997894 32999225 24039 22708 NC_000014.9 velvet.60658 99.92 True fake: scaffold gap size wrong estimation (local) 32994905 32995681 27262 26486 NC_000014.9 velvet.60658 99.87 True fake: scaffold gap size wrong estimation (local) 32993012 32994470 30608 29111 NC_000014.9 velvet.60658 100.0 True fake: scaffold gap size wrong estimation (local) 32989655 32990798 34529 33386 NC_000014.9 velvet.60658 100.0 True fake: scaffold gap size wrong estimation (local) 32984008 32989358 41113 35593 NC_000014.9 velvet.60658 99.91 True fake: scaffold gap size wrong estimation (local) 32982507 32983758 43439 42188 NC_000014.9 velvet.60658 100.0 True fake: scaffold gap size wrong estimation (local) 32973807 32975307 49881 48381 NC_000014.9 velvet.60658 99.93 True fake: scaffold gap size wrong estimation (local) 32972214 32973522 52190 50882 NC_000014.9 velvet.60658 99.85 True fake: scaffold gap size wrong estimation (local) 32971359 32971932 52989 52416 NC_000014.9 velvet.60658 100.0 True fake: scaffold gap size wrong estimation (local) 32968883 32971072 56334 54145 NC_000014.9 velvet.60658 99.86 True fake: scaffold gap size wrong estimation (local) 32967547 32968755 58506 57007 NC_000014.9 velvet.60658 99.91 True relocation, scaffold gap is present, inconsistency = 12544824 20421160 20422010 60069 59219 NC_000014.9 velvet.60658 99.88 True fake: scaffold gap size wrong estimation (local) 20419277 20420113 62550 61674 NC_000014.9 velvet.60658 99.76 True relocation, scaffold gap is present, inconsistency = -74127362 94540857 94544232 68332 64957 NC_000014.9 velvet.60658 99.91 True relocation, scaffold gap is present, inconsistency = 61547970 32991175 32992876 70044 68343 NC_000014.9 velvet.60658 99.94 True fake: scaffold gap size wrong estimation (extensive) 32977667 32982432 75051 70285 NC_000014.9 velvet.60658 99.92 True relocation, scaffold gap is present, inconsistency = -29917660 62893728 62895316 76650 75062 NC_000014.9 velvet.60658 99.87 True relocation, scaffold gap is present, inconsistency = 40395581 22496478 22498136 78319 76661 NC_000014.9 velvet.60658 100.0 True fake: scaffold gap size wrong estimation (local) 22491547 22496231 83982 79298 NC_000014.9 velvet.60658 99.94 True relocation, scaffold gap is present, inconsistency = 19817 22516059 22519233 83993 87167 NC_000014.9 velvet.60658 99.94 True fake: scaffold gap size wrong estimation (local) 22519473 22527801 88258 96840 NC_000014.9 velvet.60658 99.94 True relocation, scaffold gap is present, inconsistency = 8632 22507999 22510830 99734 96851 NC_000014.9 velvet.60658 99.93 True fake: scaffold gap size wrong estimation (local) 22504979 22507757 103640 100805 NC_000014.9 velvet.60658 99.42 True fake: scaffold gap size wrong estimation (local) 22498403 22504395 110980 104987 NC_000014.9 velvet.60658 99.9 True relocation, scaffold gap is present, inconsistency = 72042365 94546771 94549875 110991 115220 NC_000014.9 velvet.60658 99.77 True relocation, scaffold gap is present, inconsistency = 72085460 22452693 22461300 124680 115231 NC_000014.9 velvet.60658 99.94 True relocation, scaffold gap is present, inconsistency = -10514862 32966891 32967544 125344 124691 NC_000014.9 velvet.60658 98.32 True local misassembly 32964940 32966535 126940 125345 NC_000014.9 velvet.60658 100.0 True relocation, scaffold gap is present, inconsistency = 10514878 22433860 22441128 143871 135874 NC_000014.9 velvet.60658 98.59 True fake: scaffold gap size wrong estimation (local) 22418471 22423086 155143 150310 NC_000014.9 velvet.60658 99.8 True relocation, scaffold gap is present, inconsistency = 68055359 90481164 90484700 157862 161398 NC_000014.9 velvet.60658 99.92 True fake: scaffold gap size wrong estimation (local) 90485971 90488328 163441 165798 NC_000014.9 velvet.60658 99.96 True relocation, scaffold gap is present, inconsistency = 8790210 99278549 99281318 168578 165809 NC_000014.9 velvet.60658 99.96 True relocation, scaffold gap is present, inconsistency = 8760736 90516459 90517802 169932 168589 NC_000014.9 velvet.60658 99.85 True fake: scaffold gap size wrong estimation (local) 90515373 90515938 171271 170706 NC_000014.9 velvet.60658 100.0 True fake: scaffold gap size wrong estimation (local) 90513768 90514794 173465 172439 NC_000014.9 velvet.60658 99.03 True fake: scaffold gap size wrong estimation (local) 90511265 90513767 176113 173611 NC_000014.9 velvet.60658 99.56 True local misassembly 90506439 90507990 177665 176114 NC_000014.9 velvet.60658 99.94 True fake: scaffold gap size wrong estimation (local) 90505371 90506113 178937 178195 NC_000014.9 velvet.60658 98.65 True fake: scaffold gap size wrong estimation (local) 90501763 90504137 183487 181113 NC_000014.9 velvet.60658 99.87 True fake: scaffold gap size wrong estimation (local) 90497769 90501450 188127 184544 NC_000014.9 velvet.60658 97.23 True inversion, scaffold gap is present 90493156 90493800 188138 188782 NC_000014.9 velvet.60658 100.0 True fake: scaffold gap size wrong estimation (local) 90494029 90495902 189969 191842 NC_000014.9 velvet.60658 99.95 True relocation, scaffold gap is present, inconsistency = 15318678 75172589 75173246 194621 193947 NC_000014.9 velvet.60658 98.91 True relocation, scaffold gap is present, inconsistency = 19098095 56071490 56074483 197729 194632 NC_000014.9 velvet.60658 96.26 True relocation, scaffold gap is present, inconsistency = 20815875 76891079 76891909 198450 199280 NC_000014.9 velvet.60658 100.0 True fake: scaffold gap size wrong estimation (local) 76893332 76895652 201421 203741 NC_000014.9 velvet.60658 99.96 True fake: scaffold gap size wrong estimation (local) 76895887 76896610 204871 205594 NC_000014.9 velvet.60658 100.0 True relocation, scaffold gap is present, inconsistency = 1769466 75119289 75122516 212755 209499 NC_000014.9 velvet.60658 97.19 True inversion, scaffold gap is present 75125070 75126954 212766 214650 NC_000014.9 velvet.60658 99.36 True local misassembly 75126955 75127537 214855 215437 NC_000014.9 velvet.60658 99.14 True relocation, scaffold gap is present, inconsistency = 7900 75117009 75119044 217483 215448 NC_000014.9 velvet.60658 99.9 True relocation, scaffold gap is present, inconsistency = -15425428 90540397 90541939 219523 217981 NC_000014.9 velvet.60658 99.94 True relocation, scaffold gap is present, inconsistency = 10146 90529104 90530009 220670 219765 NC_000014.9 velvet.60658 100.0 True local misassembly 90527955 90528626 221588 220917 NC_000014.9 velvet.60658 99.85 True fake: scaffold gap size wrong estimation (local) 90526869 90527543 223943 223269 NC_000014.9 velvet.60658 99.85 True inversion, scaffold gap is present 90523644 90525993 223954 226300 NC_000014.9 velvet.60658 99.83 True relocation, scaffold gap is present, inconsistency = -16030 90509974 90511017 226311 227354 NC_000014.9 velvet.60658 100.0 True fake: scaffold gap size wrong estimation (local) 90517886 90523357 227533 233004 NC_000014.9 velvet.60658 99.89 True relocation, scaffold gap is present, inconsistency = 14095 90537463 90539232 234776 233015 NC_000014.9 velvet.60658 99.21 True inversion, scaffold gap is present 90531651 90537286 234787 240445 NC_000014.9 velvet.60658 99.47 True inversion, scaffold gap is present 90539264 90540392 241584 240456 NC_000014.9 velvet.60658 100.0 True relocation, scaffold gap is present, inconsistency = 7963 90530256 90531290 241595 242629 NC_000014.9 velvet.60658 99.9 True relocation, scaffold gap is present, inconsistency = 8766822 99298123 99298970 242640 243487 NC_000014.9 velvet.60658 100.0 True fake: scaffold gap size wrong estimation (local) 99299617 99301017 244712 246112 NC_000014.9 velvet.60658 100.0 True relocation, scaffold gap is present, inconsistency = -22432049 76869793 76871842 246937 248986 NC_000014.9 velvet.60658 99.9 True fake: scaffold gap size wrong estimation (local) 76872539 76876496 250482 254438 NC_000014.9 velvet.60658 99.87 True relocation, scaffold gap is present, inconsistency = 8335109 85230676 85233034 273509 275874 NC_000014.9 velvet.60658 99.79 True fake: scaffold gap size wrong estimation (local) 85233073 85233640 276843 277410 NC_000014.9 velvet.60658 99.47 True fake: scaffold gap size wrong estimation (local) 85233873 85235543 277518 279188 NC_000014.9 velvet.60658 99.94 True relocation, scaffold gap is present, inconsistency = -8333069 76908811 76909684 285525 286398 NC_000014.9 velvet.60658 99.89 True fake: not a misassembly (possible transposable element) 49537301 49538611 286504 287836 NC_000014.9 velvet.60658 96.5 True fake: not a misassembly (possible transposable element) 76910359 76910875 287847 288363 NC_000014.9 velvet.60658 100.0 True relocation, scaffold gap is present, inconsistency = -27372350 49538853 49540704 288691 290542 NC_000014.9 velvet.60658 99.89 True relocation, scaffold gap is present, inconsistency = 35687783 85240781 85241579 302836 303634 NC_000014.9 velvet.60658 100.0 True relocation, scaffold gap is present, inconsistency = 20612 85263392 85264711 304835 306154 NC_000014.9 velvet.60658 99.7 True fake: scaffold gap size wrong estimation (local) 85265144 85267432 307291 309576 NC_000014.9 velvet.60658 99.52 True fake: scaffold gap size wrong estimation (local) 85267529 85272598 310490 315502 NC_000014.9 velvet.60658 98.72 True CONTIG velvet.60658 315502 misassembled 40570944 40575411 4473 1 NC_000014.9 velvet.60661 99.71 True fake: scaffold gap size wrong estimation (local) 40566672 40570685 9451 5441 NC_000014.9 velvet.60661 99.65 True fake: scaffold gap size wrong estimation (local) 40565691 40566577 11260 10328 NC_000014.9 velvet.60661 99.43 True fake: not a misassembly (possible transposable element) 40562487 40563054 14621 15188 NC_000014.9 velvet.60661 99.47 True fake: not a misassembly (possible transposable element) 40561238 40562204 19989 19025 NC_000014.9 velvet.60661 99.28 True relocation, scaffold gap is present, inconsistency = -55771 40596357 40596875 40641 40123 NC_000014.9 velvet.60661 100.0 True relocation, scaffold gap is present, inconsistency = 34044 40557377 40559710 45555 43244 NC_000014.9 velvet.60661 98.71 True fake: scaffold gap size wrong estimation (local) 40551059 40556808 53666 46975 NC_000014.9 velvet.60661 97.39 True fake: scaffold gap size wrong estimation (local) 40547356 40550959 58815 54730 NC_000014.9 velvet.60661 99.49 True fake: scaffold gap size wrong estimation (local) 40544964 40547093 61748 59621 NC_000014.9 velvet.60661 99.48 True fake: scaffold gap size wrong estimation (local) 40540486 40544126 67841 63313 NC_000014.9 velvet.60661 99.61 True fake: scaffold gap size wrong estimation (local) 40537641 40539298 71526 69869 NC_000014.9 velvet.60661 99.76 True fake: not a misassembly (possible transposable element) 40580152 40581956 71537 73341 NC_000014.9 velvet.60661 99.11 True fake: not a misassembly (possible transposable element) 40534884 40536592 75051 73342 NC_000014.9 velvet.60661 99.77 True relocation, inconsistency = 45375 40581968 40583903 75052 76987 NC_000014.9 velvet.60661 99.17 True relocation, scaffold gap is present, inconsistency = -8793 40576038 40580151 77915 82271 NC_000014.9 velvet.60661 99.56 True relocation, scaffold gap is present, inconsistency = 13204 40593975 40595312 84228 82891 NC_000014.9 velvet.60661 98.8 True fake: scaffold gap size wrong estimation (local) 40592510 40593974 85832 84368 NC_000014.9 velvet.60661 99.8 True inversion, scaffold gap is present 40597046 40604009 87904 94867 NC_000014.9 velvet.60661 99.91 True fake: scaffold gap size wrong estimation (local) 40604197 40606163 95855 97874 NC_000014.9 velvet.60661 99.74 True fake: scaffold gap size wrong estimation (local) 40611036 40611909 104035 104908 NC_000014.9 velvet.60661 99.77 True fake: scaffold gap size wrong estimation (local) 40634559 40636157 132331 133929 NC_000014.9 velvet.60661 99.94 True relocation, scaffold gap is present, inconsistency = 115750 40515049 40516505 137689 136233 NC_000014.9 velvet.60661 99.93 True fake: scaffold gap size wrong estimation (local) 40512533 40513798 140778 139513 NC_000014.9 velvet.60661 99.45 True fake: scaffold gap size wrong estimation (local) 40511445 40512532 143351 142264 NC_000014.9 velvet.60661 96.6 True fake: scaffold gap size wrong estimation (local) 40509491 40511444 146412 144459 NC_000014.9 velvet.60661 99.74 True fake: scaffold gap size wrong estimation (local) 40500173 40507116 156276 149350 NC_000014.9 velvet.60661 99.68 True fake: scaffold gap size wrong estimation (local) 40495731 40500060 161412 157083 NC_000014.9 velvet.60661 99.82 True fake: not a misassembly (possible transposable element) 56413484 56415348 161423 163287 NC_000014.9 velvet.60661 99.84 True fake: not a misassembly (possible transposable element) 40492422 40495510 166376 163288 NC_000014.9 velvet.60661 99.87 True relocation, scaffold gap is present, inconsistency = -17541 40507343 40509469 168996 166870 NC_000014.9 velvet.60661 99.95 True relocation, scaffold gap is present, inconsistency = 15895134 56407584 56413462 171977 177915 NC_000014.9 velvet.60661 99.04 True fake: scaffold gap size wrong estimation (local) 56415380 56416520 180581 181721 NC_000014.9 velvet.60661 99.82 True fake: scaffold gap size wrong estimation (local) 56417232 56417851 183752 184371 NC_000014.9 velvet.60661 99.84 True relocation, scaffold gap is present, inconsistency = -23885 56393977 56394975 184382 185380 NC_000014.9 velvet.60661 99.8 True fake: scaffold gap size wrong estimation (local) 56418112 56421834 204021 207743 NC_000014.9 velvet.60661 99.81 True fake: scaffold gap size wrong estimation (local) 56422135 56424988 208869 211721 NC_000014.9 velvet.60661 99.86 True fake: scaffold gap size wrong estimation (local) 56425243 56432441 212446 219735 NC_000014.9 velvet.60661 99.3 True fake: scaffold gap size wrong estimation (local) 56432601 56434679 220616 222694 NC_000014.9 velvet.60661 99.81 True fake: scaffold gap size wrong estimation (local) 56434897 56437197 223623 225924 NC_000014.9 velvet.60661 99.78 True fake: scaffold gap size wrong estimation (local) 56449409 56454641 233732 238965 NC_000014.9 velvet.60661 99.81 True fake: scaffold gap size wrong estimation (extensive) 56463035 56469154 256063 262182 NC_000014.9 velvet.60661 99.8 True fake: scaffold gap size wrong estimation (local) 56469155 56469665 264039 264549 NC_000014.9 velvet.60661 100.0 True indel: indel (> 5bp) 56469671 56470653 264580 265562 NC_000014.9 velvet.60661 99.69 True indel: indel (> 5bp) 56470654 56475203 265569 270118 NC_000014.9 velvet.60661 99.85 True fake: scaffold gap size wrong estimation (local) 56475685 56478810 271376 274552 NC_000014.9 velvet.60661 99.97 True fake: scaffold gap size wrong estimation (local) 56479742 56481727 276122 278152 NC_000014.9 velvet.60661 99.9 True fake: scaffold gap size wrong estimation (local) 56481937 56484497 279199 281759 NC_000014.9 velvet.60661 99.84 True fake: scaffold gap size wrong estimation (local) 56484659 56489335 282716 287392 NC_000014.9 velvet.60661 99.81 True fake: scaffold gap size wrong estimation (local) 56522755 56523428 315277 315948 NC_000014.9 velvet.60661 99.7 True fake: scaffold gap size wrong estimation (local) 56523647 56529405 317127 322964 NC_000014.9 velvet.60661 99.93 True fake: scaffold gap size wrong estimation (local) 56529673 56534121 324020 329247 NC_000014.9 velvet.60661 99.95 True fake: scaffold gap size wrong estimation (local) 56547382 56559503 341493 353940 NC_000014.9 velvet.60661 99.93 True fake: scaffold gap size wrong estimation (local) 56559778 56560376 355225 355823 NC_000014.9 velvet.60661 100.0 True fake: scaffold gap size wrong estimation (local) 56560680 56561189 356000 356509 NC_000014.9 velvet.60661 99.8 True fake: scaffold gap size wrong estimation (local) 56562719 56563598 358566 359445 NC_000014.9 velvet.60661 99.77 True fake: scaffold gap size wrong estimation (local) 56564879 56568664 361318 365103 NC_000014.9 velvet.60661 99.97 True fake: scaffold gap size wrong estimation (local) 56568953 56570877 366168 368092 NC_000014.9 velvet.60661 100.0 True fake: scaffold gap size wrong estimation (local) 56571765 56573017 369933 371169 NC_000014.9 velvet.60661 98.71 True fake: scaffold gap size wrong estimation (local) 56573278 56575440 371745 374112 NC_000014.9 velvet.60661 99.86 True fake: scaffold gap size wrong estimation (local) 56584038 56588717 376503 381182 NC_000014.9 velvet.60661 99.94 True relocation, scaffold gap is present, inconsistency = -13721 56575685 56584015 381871 391107 NC_000014.9 velvet.60661 99.94 True fake: scaffold gap size wrong estimation (local) 56588741 56593702 391118 396079 NC_000014.9 velvet.60661 99.96 True fake: scaffold gap size wrong estimation (local) 56594268 56596395 397417 399520 NC_000014.9 velvet.60661 98.82 True fake: scaffold gap size wrong estimation (local) 56596839 56606650 400767 411365 NC_000014.9 velvet.60661 99.97 True fake: scaffold gap size wrong estimation (local) 56606881 56610297 412398 415814 NC_000014.9 velvet.60661 99.94 True fake: scaffold gap size wrong estimation (extensive) 56622372 56624319 418201 420148 NC_000014.9 velvet.60661 99.95 True fake: scaffold gap size wrong estimation (local) 56624583 56628907 421157 425481 NC_000014.9 velvet.60661 99.93 True relocation, scaffold gap is present, inconsistency = -8695 56620223 56622089 425492 427358 NC_000014.9 velvet.60661 100.0 True fake: scaffold gap size wrong estimation (local) 56630073 56631368 430097 431392 NC_000014.9 velvet.60661 100.0 True relocation, scaffold gap is present, inconsistency = -20491 56611970 56613670 432485 434178 NC_000014.9 velvet.60661 99.59 True fake: scaffold gap size wrong estimation (local) 56614393 56619369 435797 440773 NC_000014.9 velvet.60661 99.98 True fake: scaffold gap size wrong estimation (local) 56647954 56649713 466291 468089 NC_000014.9 velvet.60661 99.19 True fake: scaffold gap size wrong estimation (local) 56650793 56651336 470235 470778 NC_000014.9 velvet.60661 100.0 True fake: scaffold gap size wrong estimation (local) 56656397 56657432 470789 471824 NC_000014.9 velvet.60661 99.81 True fake: scaffold gap size wrong estimation (local) 56657497 56658274 471925 472702 NC_000014.9 velvet.60661 100.0 True relocation, scaffold gap is present, inconsistency = 31843562 88501847 88503066 472713 473915 NC_000014.9 velvet.60661 98.52 True fake: scaffold gap size wrong estimation (local) 88503334 88506088 474938 477692 NC_000014.9 velvet.60661 99.96 True fake: not a misassembly (possible transposable element) 88525046 88525691 478127 478768 NC_000014.9 velvet.60661 99.38 True fake: not a misassembly (possible transposable element) 88511650 88513230 478779 480359 NC_000014.9 velvet.60661 100.0 True fake: scaffold gap size wrong estimation (local) 88513466 88514480 480818 481832 NC_000014.9 velvet.60661 99.9 True inversion, scaffold gap is present 88518704 88521407 485912 483218 NC_000014.9 velvet.60661 99.59 True fake: scaffold gap size wrong estimation (local) 88514735 88517651 492412 489496 NC_000014.9 velvet.60661 99.93 True relocation, scaffold gap is present, inconsistency = 16362173 72148367 72152210 496607 492764 NC_000014.9 velvet.60661 99.9 True relocation, scaffold gap is present, inconsistency = 8942122 81095968 81101918 498243 504329 NC_000014.9 velvet.60661 98.54 True fake: scaffold gap size wrong estimation (local) 81102154 81106695 505368 509909 NC_000014.9 velvet.60661 99.8 True fake: scaffold gap size wrong estimation (local) 81106972 81108356 510902 512286 NC_000014.9 velvet.60661 99.49 True fake: scaffold gap size wrong estimation (local) 81108512 81109162 512465 513115 NC_000014.9 velvet.60661 99.54 True fake: scaffold gap size wrong estimation (local) 81109468 81114145 514129 518807 NC_000014.9 velvet.60661 99.66 True relocation, scaffold gap is present, inconsistency = -24435160 56679304 56680833 519126 520655 NC_000014.9 velvet.60661 99.15 True relocation, scaffold gap is present, inconsistency = 15436312 72117525 72118138 521648 521035 NC_000014.9 velvet.60661 99.84 True relocation, scaffold gap is present, inconsistency = -16384247 88498162 88501761 525879 521659 NC_000014.9 velvet.60661 99.8 True fake: scaffold gap size wrong estimation (local) 88495558 88497429 529212 527341 NC_000014.9 velvet.60661 99.95 True relocation, scaffold gap is present, inconsistency = 7328598 81142911 81150659 545513 553261 NC_000014.9 velvet.60661 99.88 True fake: scaffold gap size wrong estimation (local) 81150948 81151940 554045 555037 NC_000014.9 velvet.60661 100.0 True fake: scaffold gap size wrong estimation (local) 81174662 81181579 579472 586434 NC_000014.9 velvet.60661 99.94 True fake: not a misassembly (possible transposable element) 54861754 54862402 586445 587093 NC_000014.9 velvet.60661 99.85 True fake: not a misassembly (possible transposable element) 81181846 81185900 587462 591516 NC_000014.9 velvet.60661 100.0 True fake: scaffold gap size wrong estimation (local) 81186155 81187104 592594 593542 NC_000014.9 velvet.60661 99.79 True fake: scaffold gap size wrong estimation (local) 81187386 81188349 593738 594701 NC_000014.9 velvet.60661 100.0 True fake: scaffold gap size wrong estimation (local) 81188810 81189418 596234 596842 NC_000014.9 velvet.60661 100.0 True CONTIG velvet.60661 597125 misassembled 31290247 31292600 2447 1 NC_000014.9 velvet.60665 97.28 True fake: scaffold gap size wrong estimation (local) 31285821 31288860 7878 4489 NC_000014.9 velvet.60665 95.95 True fake: scaffold gap size wrong estimation (local) 31284578 31285084 10020 9514 NC_000014.9 velvet.60665 98.03 True local misassembly 31283386 31284366 11001 10021 NC_000014.9 velvet.60665 98.88 True fake: scaffold gap size wrong estimation (local) 31280769 31282276 14500 12993 NC_000014.9 velvet.60665 99.93 True inversion, scaffold gap is present 31251284 31252552 38569 39836 NC_000014.9 velvet.60665 99.76 True fake: scaffold gap size wrong estimation (local) 31252840 31253452 43218 43830 NC_000014.9 velvet.60665 99.84 True fake: scaffold gap size wrong estimation (local) 31256426 31257646 48800 50002 NC_000014.9 velvet.60665 98.35 True fake: scaffold gap size wrong estimation (local) 31257893 31258773 50281 51152 NC_000014.9 velvet.60665 98.51 True fake: scaffold gap size wrong estimation (local) 31259756 31260432 52724 53400 NC_000014.9 velvet.60665 99.7 True fake: scaffold gap size wrong estimation (local) 31267689 31269216 54770 56297 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 31271668 31272219 59242 59793 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 31273957 31274688 62570 63296 NC_000014.9 velvet.60665 99.18 True fake: scaffold gap size wrong estimation (local) 31277019 31277760 66122 66863 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 31280091 31280673 69692 70280 NC_000014.9 velvet.60665 100.0 True local misassembly 31278842 31279444 70402 71004 NC_000014.9 velvet.60665 100.0 True relocation, scaffold gap is present, inconsistency = -9714 31272264 31273053 73538 74327 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 31307105 31308255 105784 106934 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 31308534 31309820 107210 109070 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 31310678 31312428 110145 112336 NC_000014.9 velvet.60665 98.47 True fake: scaffold gap size wrong estimation (local) 31312859 31314002 113224 114367 NC_000014.9 velvet.60665 100.0 True fake: not a misassembly (possible transposable element) 29769297 29770874 115984 114378 NC_000014.9 velvet.60665 98.01 True fake: not a misassembly (possible transposable element) 31315136 31316028 116380 117272 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 31316755 31317319 117283 117845 NC_000014.9 velvet.60665 99.64 True fake: scaffold gap size wrong estimation (local) 31317598 31318515 124571 125488 NC_000014.9 velvet.60665 99.89 True fake: scaffold gap size wrong estimation (local) 31319999 31321220 127734 128955 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 31321446 31324700 129220 133072 NC_000014.9 velvet.60665 99.36 True fake: scaffold gap size wrong estimation (local) 31324759 31325511 133834 134586 NC_000014.9 velvet.60665 100.0 True local misassembly 31325786 31326689 134587 135490 NC_000014.9 velvet.60665 98.89 True relocation, scaffold gap is present, inconsistency = 72118088 103444788 103446283 135501 136996 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 103446796 103447806 137459 138469 NC_000014.9 velvet.60665 99.01 True fake: scaffold gap size wrong estimation (extensive) 103456919 103458207 138480 139768 NC_000014.9 velvet.60665 99.84 True relocation, scaffold gap is present, inconsistency = -10146 103448072 103449318 139779 141025 NC_000014.9 velvet.60665 99.92 True fake: scaffold gap size wrong estimation (local) 103449444 103450889 141288 142733 NC_000014.9 velvet.60665 99.86 True fake: scaffold gap size wrong estimation (local) 103451216 103452426 142852 144062 NC_000014.9 velvet.60665 99.09 True fake: scaffold gap size wrong estimation (local) 103458488 103459538 144436 145486 NC_000014.9 velvet.60665 99.81 True local misassembly 103452775 103454294 145497 147016 NC_000014.9 velvet.60665 99.93 True fake: scaffold gap size wrong estimation (local) 103460369 103461781 147447 148859 NC_000014.9 velvet.60665 99.29 True fake: scaffold gap size wrong estimation (local) 103462067 103464311 149924 152166 NC_000014.9 velvet.60665 99.6 True fake: scaffold gap size wrong estimation (local) 103485510 103486094 169952 170536 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 103488098 103490061 173350 175313 NC_000014.9 velvet.60665 99.85 True fake: scaffold gap size wrong estimation (local) 103490183 103493629 176231 180277 NC_000014.9 velvet.60665 99.91 True fake: scaffold gap size wrong estimation (local) 103495500 103496330 182340 183170 NC_000014.9 velvet.60665 98.68 True fake: scaffold gap size wrong estimation (local) 103496717 103497970 184592 185845 NC_000014.9 velvet.60665 99.84 True fake: scaffold gap size wrong estimation (local) 103498492 103499217 186096 186821 NC_000014.9 velvet.60665 98.62 True fake: scaffold gap size wrong estimation (local) 103499868 103500644 187342 188118 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 103500908 103504476 189517 193085 NC_000014.9 velvet.60665 99.86 True fake: scaffold gap size wrong estimation (local) 103507299 103508315 196390 197406 NC_000014.9 velvet.60665 99.8 True local misassembly 103508450 103509190 197407 198147 NC_000014.9 velvet.60665 96.76 True fake: scaffold gap size wrong estimation (local) 103509667 103511589 199622 201544 NC_000014.9 velvet.60665 99.9 True fake: scaffold gap size wrong estimation (local) 103512451 103514204 203266 205019 NC_000014.9 velvet.60665 99.71 True fake: scaffold gap size wrong estimation (local) 103514888 103515665 206195 206972 NC_000014.9 velvet.60665 99.61 True fake: scaffold gap size wrong estimation (local) 103522864 103525752 209465 212297 NC_000014.9 velvet.60665 97.7 True fake: scaffold gap size wrong estimation (local) 103525842 103539804 212485 226651 NC_000014.9 velvet.60665 99.86 True fake: scaffold gap size wrong estimation (local) 103540051 103547941 227669 235638 NC_000014.9 velvet.60665 99.91 True fake: scaffold gap size wrong estimation (local) 103548062 103553591 236571 242100 NC_000014.9 velvet.60665 99.91 True fake: scaffold gap size wrong estimation (local) 103556486 103557767 242991 244272 NC_000014.9 velvet.60665 100.0 True local misassembly 103553693 103555309 244283 245832 NC_000014.9 velvet.60665 95.8 True fake: scaffold gap size wrong estimation (local) 103555548 103556229 247390 248071 NC_000014.9 velvet.60665 100.0 True relocation, scaffold gap is present, inconsistency = -18383930 85173163 85184786 248935 261017 NC_000014.9 velvet.60665 99.98 True fake: scaffold gap size wrong estimation (local) 85185082 85189520 261620 266636 NC_000014.9 velvet.60665 98.66 True fake: scaffold gap size wrong estimation (local) 85189913 85191751 267518 269356 NC_000014.9 velvet.60665 99.89 True fake: scaffold gap size wrong estimation (local) 85191951 85192487 269816 270352 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 85192806 85195097 271127 273418 NC_000014.9 velvet.60665 99.91 True fake: scaffold gap size wrong estimation (local) 85228796 85229950 301169 302411 NC_000014.9 velvet.60665 96.67 True relocation, scaffold gap is present, inconsistency = -24235 85205726 85207233 302422 303929 NC_000014.9 velvet.60665 99.87 True fake: scaffold gap size wrong estimation (local) 85207594 85210536 305076 308053 NC_000014.9 velvet.60665 99.86 True fake: scaffold gap size wrong estimation (local) 85210712 85211470 308943 309701 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 85213298 85214238 312070 313010 NC_000014.9 velvet.60665 100.0 True indel: indel (<= 5bp) 85214239 85214805 313012 313578 NC_000014.9 velvet.60665 99.82 True local misassembly 85214987 85215672 313579 314264 NC_000014.9 velvet.60665 97.08 True fake: scaffold gap size wrong estimation (local) 85215952 85220210 315519 320586 NC_000014.9 velvet.60665 99.55 True fake: scaffold gap size wrong estimation (local) 85220586 85223091 321595 324359 NC_000014.9 velvet.60665 99.08 True fake: scaffold gap size wrong estimation (local) 85223369 85224227 325256 326114 NC_000014.9 velvet.60665 99.88 True fake: scaffold gap size wrong estimation (local) 85224259 85225369 329079 330189 NC_000014.9 velvet.60665 99.82 True fake: scaffold gap size wrong estimation (local) 85252872 85255505 357141 359774 NC_000014.9 velvet.60665 99.89 True fake: scaffold gap size wrong estimation (local) 85255622 85256226 360544 361148 NC_000014.9 velvet.60665 99.83 True relocation, scaffold gap is present, inconsistency = -7428 85248809 85249682 361159 362032 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 85250131 85252755 363112 365723 NC_000014.9 velvet.60665 99.43 True relocation, scaffold gap is present, inconsistency = 35760929 49488325 49489191 366600 365734 NC_000014.9 velvet.60665 99.77 True fake: scaffold gap size wrong estimation (local) 49480031 49487934 375744 367849 NC_000014.9 velvet.60665 99.75 True relocation, scaffold gap is present, inconsistency = 57107 49420933 49422913 375755 377735 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 49423180 49431415 378789 387024 NC_000014.9 velvet.60665 99.96 True fake: scaffold gap size wrong estimation (local) 49432056 49433201 388493 389638 NC_000014.9 velvet.60665 98.95 True relocation, scaffold gap is present, inconsistency = 11865 49454858 49455364 399936 399430 NC_000014.9 velvet.60665 99.8 True fake: scaffold gap size wrong estimation (local) 49444051 49454606 411974 401114 NC_000014.9 velvet.60665 99.93 True relocation, scaffold gap is present, inconsistency = 8676 49463293 49467533 411985 416881 NC_000014.9 velvet.60665 99.95 True fake: scaffold gap size wrong estimation (local) 49468159 49469474 418231 419546 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 49470127 49471153 419983 421009 NC_000014.9 velvet.60665 98.73 True relocation, scaffold gap is present, inconsistency = 38569 49415525 49420171 437039 432396 NC_000014.9 velvet.60665 99.91 True fake: scaffold gap size wrong estimation (local) 49414535 49415248 438269 437556 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 49380421 49385944 473102 466756 NC_000014.9 velvet.60665 99.54 True relocation, scaffold gap is present, inconsistency = 35851847 85237802 85240587 473113 476419 NC_000014.9 velvet.60665 99.64 True local misassembly 85235842 85237798 476430 478386 NC_000014.9 velvet.60665 99.9 True fake: scaffold gap size wrong estimation (local) 85241611 85247739 478397 485306 NC_000014.9 velvet.60665 99.84 True fake: scaffold gap size wrong estimation (local) 85248024 85248778 485980 486734 NC_000014.9 velvet.60665 100.0 True relocation, scaffold gap is present, inconsistency = -35756588 49492201 49494082 486745 488626 NC_000014.9 velvet.60665 99.95 True indel: indel (<= 5bp) 49494084 49495527 488627 490070 NC_000014.9 velvet.60665 99.93 True fake: scaffold gap size wrong estimation (local) 49495730 49496995 491175 492440 NC_000014.9 velvet.60665 99.13 True fake: scaffold gap size wrong estimation (local) 49496996 49498792 493547 495343 NC_000014.9 velvet.60665 99.44 True fake: scaffold gap size wrong estimation (local) 49501124 49502821 498140 499837 NC_000014.9 velvet.60665 99.76 True fake: scaffold gap size wrong estimation (local) 49503426 49504606 501217 502397 NC_000014.9 velvet.60665 100.0 True relocation, scaffold gap is present, inconsistency = 27384778 76911467 76912819 524480 525832 NC_000014.9 velvet.60665 99.93 True fake: not a misassembly (possible transposable element) 49540780 49541817 526178 527212 NC_000014.9 velvet.60665 99.61 True fake: not a misassembly (possible transposable element) 76913258 76914488 527223 528453 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 76916068 76916660 529839 530431 NC_000014.9 velvet.60665 99.83 True relocation, scaffold gap is present, inconsistency = -27374597 49542074 49545422 530442 533790 NC_000014.9 velvet.60665 99.88 True fake: scaffold gap size wrong estimation (local) 49545559 49547474 534697 536612 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 49552632 49553797 538255 539420 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 49557777 49560186 540249 542658 NC_000014.9 velvet.60665 100.0 True relocation, scaffold gap is present, inconsistency = -8374 49553806 49554541 544652 545387 NC_000014.9 velvet.60665 99.86 True fake: scaffold gap size wrong estimation (local) 49555168 49555769 545398 545999 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 49563496 49564074 550449 551027 NC_000014.9 velvet.60665 98.27 True fake: scaffold gap size wrong estimation (local) 49565515 49566085 553700 554270 NC_000014.9 velvet.60665 100.0 True local misassembly 49564355 49565231 554353 555193 NC_000014.9 velvet.60665 95.85 True relocation, scaffold gap is present, inconsistency = -17129 49548534 49552343 555625 559428 NC_000014.9 velvet.60665 98.31 True relocation, scaffold gap is present, inconsistency = 35722005 85275197 85278069 560277 563149 NC_000014.9 velvet.60665 99.62 True fake: scaffold gap size wrong estimation (local) 85289210 85292971 571623 575384 NC_000014.9 velvet.60665 99.97 True relocation, scaffold gap is present, inconsistency = -14348 85278634 85285391 575395 582152 NC_000014.9 velvet.60665 99.94 True fake: scaffold gap size wrong estimation (extensive) 85293125 85295868 582163 584906 NC_000014.9 velvet.60665 99.96 True relocation, scaffold gap is present, inconsistency = -23249 85272630 85274663 584917 586949 NC_000014.9 velvet.60665 99.71 True fake: scaffold gap size wrong estimation (extensive) 85285411 85288349 588698 591871 NC_000014.9 velvet.60665 99.97 True relocation, scaffold gap is present, inconsistency = -35718085 49570275 49572004 591882 593611 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 49572212 49573111 593771 594670 NC_000014.9 velvet.60665 99.89 True fake: scaffold gap size wrong estimation (local) 49573498 49575077 595954 597533 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 49575342 49576244 597765 598667 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 49577184 49578577 600344 601737 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 49578859 49579495 602167 602803 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 49583493 49584256 602814 603609 NC_000014.9 velvet.60665 95.98 True fake: scaffold gap size wrong estimation (local) 49585310 49586602 605041 606360 NC_000014.9 velvet.60665 98.35 True fake: scaffold gap size wrong estimation (extensive) 49594374 49595760 606812 608198 NC_000014.9 velvet.60665 99.93 True relocation, scaffold gap is present, inconsistency = -8898 49586873 49588565 608209 609901 NC_000014.9 velvet.60665 100.0 True relocation, scaffold gap is present, inconsistency = 35706573 85296296 85298400 611059 613163 NC_000014.9 velvet.60665 99.81 True relocation, scaffold gap is present, inconsistency = -35718993 49579498 49580627 613254 614383 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 49581221 49583299 616328 618372 NC_000014.9 velvet.60665 98.36 True fake: scaffold gap size wrong estimation (local) 49592906 49593447 622011 622552 NC_000014.9 velvet.60665 100.0 True local misassembly 49593715 49594355 622553 623193 NC_000014.9 velvet.60665 98.44 True relocation, scaffold gap is present, inconsistency = 35715411 85310565 85312873 623992 626300 NC_000014.9 velvet.60665 99.91 True fake: scaffold gap size wrong estimation (local) 85318872 85337797 626311 645269 NC_000014.9 velvet.60665 99.8 True relocation, scaffold gap is present, inconsistency = -35740426 49597943 49599776 645841 647674 NC_000014.9 velvet.60665 99.45 True fake: scaffold gap size wrong estimation (local) 49599956 49601839 648733 650616 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 49602216 49602850 651410 652044 NC_000014.9 velvet.60665 100.0 True relocation, scaffold gap is present, inconsistency = 16063 49621037 49626231 654168 659546 NC_000014.9 velvet.60665 96.25 True relocation, scaffold gap is present, inconsistency = 47114175 96740433 96741126 659573 660266 NC_000014.9 velvet.60665 100.0 True relocation, scaffold gap is present, inconsistency = 23917624 72814812 72817364 668263 665711 NC_000014.9 velvet.60665 99.84 True fake: not a misassembly (possible transposable element) 49631574 49632461 668274 669161 NC_000014.9 velvet.60665 100.0 True fake: not a misassembly (possible transposable element) 72805838 72814535 678060 669358 NC_000014.9 velvet.60665 99.64 True relocation, scaffold gap is present, inconsistency = -16811 72821135 72821737 679574 678972 NC_000014.9 velvet.60665 99.83 True fake: scaffold gap size wrong estimation (local) 72819879 72820723 680533 679689 NC_000014.9 velvet.60665 99.88 True relocation, scaffold gap is present, inconsistency = -41803 72860837 72861671 681357 680544 NC_000014.9 velvet.60665 97.09 True local misassembly 72861784 72863075 682933 681642 NC_000014.9 velvet.60665 99.77 True relocation, scaffold gap is present, inconsistency = 34920 72825158 72826853 684662 682944 NC_000014.9 velvet.60665 99.88 True fake: scaffold gap size wrong estimation (local) 72822375 72824534 688297 686138 NC_000014.9 velvet.60665 99.91 True fake: scaffold gap size wrong estimation (local) 72818205 72819656 693556 692105 NC_000014.9 velvet.60665 99.93 True relocation, scaffold gap is present, inconsistency = 12522 72799463 72805175 700532 694064 NC_000014.9 velvet.60665 99.25 True fake: scaffold gap size wrong estimation (local) 72798261 72799393 701675 700543 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 72796464 72797981 703885 702368 NC_000014.9 velvet.60665 99.8 True fake: scaffold gap size wrong estimation (local) 72789793 72796224 711465 704682 NC_000014.9 velvet.60665 97.42 True fake: scaffold gap size wrong estimation (local) 72786235 72789722 716040 712554 NC_000014.9 velvet.60665 99.83 True fake: scaffold gap size wrong estimation (local) 72784921 72785976 717756 716701 NC_000014.9 velvet.60665 99.91 True fake: scaffold gap size wrong estimation (local) 72782774 72784783 720527 718518 NC_000014.9 velvet.60665 96.82 True fake: scaffold gap size wrong estimation (local) 72778558 72782212 725519 721865 NC_000014.9 velvet.60665 99.92 True fake: scaffold gap size wrong estimation (local) 72775977 72778462 728246 725761 NC_000014.9 velvet.60665 99.36 True fake: scaffold gap size wrong estimation (local) 72774266 72775976 731388 729678 NC_000014.9 velvet.60665 99.71 True fake: scaffold gap size wrong estimation (local) 72773452 72773998 732757 732211 NC_000014.9 velvet.60665 99.82 True fake: scaffold gap size wrong estimation (local) 72771168 72773132 735297 733333 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 72767761 72768944 739390 738207 NC_000014.9 velvet.60665 99.75 True indel: indel (<= 5bp) 72766708 72767760 740444 739392 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 72765899 72766519 741848 741228 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 72764768 72765660 742991 742099 NC_000014.9 velvet.60665 99.89 True fake: scaffold gap size wrong estimation (local) 72756905 72764478 751523 743848 NC_000014.9 velvet.60665 98.61 True fake: scaffold gap size wrong estimation (local) 72752623 72756541 756741 752735 NC_000014.9 velvet.60665 99.95 True fake: scaffold gap size wrong estimation (local) 72739242 72742448 771702 768495 NC_000014.9 velvet.60665 99.88 True fake: scaffold gap size wrong estimation (local) 72732583 72739005 779662 772597 NC_000014.9 velvet.60665 99.89 True fake: scaffold gap size wrong estimation (local) 72729232 72730891 783722 782063 NC_000014.9 velvet.60665 99.88 True fake: scaffold gap size wrong estimation (local) 72727577 72728964 785739 784352 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 72724959 72727297 789105 786767 NC_000014.9 velvet.60665 99.83 True fake: scaffold gap size wrong estimation (local) 72723213 72724213 791360 790360 NC_000014.9 velvet.60665 99.9 True fake: scaffold gap size wrong estimation (local) 72719175 72723032 796034 792112 NC_000014.9 velvet.60665 99.92 True fake: scaffold gap size wrong estimation (local) 72712828 72718765 803134 797197 NC_000014.9 velvet.60665 99.83 True fake: scaffold gap size wrong estimation (local) 72707865 72712586 808947 804226 NC_000014.9 velvet.60665 99.98 True fake: scaffold gap size wrong estimation (extensive) 72691729 72699243 816495 808958 NC_000014.9 velvet.60665 99.36 True inversion, scaffold gap is present 72699550 72705296 816506 822252 NC_000014.9 velvet.60665 99.93 True relocation, scaffold gap is present, inconsistency = 8095 72688303 72691444 825404 822263 NC_000014.9 velvet.60665 100.0 True relocation, scaffold gap is present, inconsistency = 4269750 76963278 76963779 827488 827989 NC_000014.9 velvet.60665 100.0 True local misassembly 76961529 76962985 828000 829456 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 76964652 76966297 832038 833723 NC_000014.9 velvet.60665 99.82 True fake: scaffold gap size wrong estimation (local) 76966673 76967364 835022 835756 NC_000014.9 velvet.60665 100.0 True relocation, scaffold gap is present, inconsistency = -2909098 74070530 74072644 848020 850134 NC_000014.9 velvet.60665 100.0 True relocation, scaffold gap is present, inconsistency = 1382374 72684506 72688145 853784 850145 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 72683321 72684083 855601 854838 NC_000014.9 velvet.60665 99.87 True fake: scaffold gap size wrong estimation (local) 72682218 72683042 856825 856001 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 72676678 72681941 862836 857573 NC_000014.9 velvet.60665 99.98 True indel: indel (<= 5bp) 72672023 72676499 867489 863013 NC_000014.9 velvet.60665 98.93 True fake: scaffold gap size wrong estimation (local) 72663167 72672022 876424 867569 NC_000014.9 velvet.60665 99.95 True fake: scaffold gap size wrong estimation (local) 72662405 72662938 877253 876720 NC_000014.9 velvet.60665 98.5 True relocation, scaffold gap is present, inconsistency = -17904 72661861 72662394 895701 895168 NC_000014.9 velvet.60665 97.94 True indel: indel (> 5bp) 72648571 72661854 908985 895702 NC_000014.9 velvet.60665 99.92 True fake: not a misassembly (possible transposable element) 72731198 72732581 908996 910379 NC_000014.9 velvet.60665 99.78 True fake: not a misassembly (possible transposable element) 72645350 72648321 913357 910390 NC_000014.9 velvet.60665 99.76 True relocation, scaffold gap is present, inconsistency = 100663 72749900 72752409 914273 916938 NC_000014.9 velvet.60665 99.88 True relocation, scaffold gap is present, inconsistency = -8772 72743648 72747632 916949 921002 NC_000014.9 velvet.60665 99.85 True relocation, scaffold gap is present, inconsistency = 25290244 98039330 98047967 931854 922456 NC_000014.9 velvet.60665 99.65 True fake: scaffold gap size wrong estimation (local) 98034041 98039240 937302 932099 NC_000014.9 velvet.60665 99.9 True fake: scaffold gap size wrong estimation (local) 98032172 98033889 939754 938042 NC_000014.9 velvet.60665 99.65 True fake: scaffold gap size wrong estimation (local) 98026030 98031996 946549 940551 NC_000014.9 velvet.60665 98.97 True fake: scaffold gap size wrong estimation (local) 98017077 98020891 950374 946560 NC_000014.9 velvet.60665 99.63 True fake: scaffold gap size wrong estimation (local) 98014690 98016920 953572 951362 NC_000014.9 velvet.60665 98.6 True relocation, scaffold gap is present, inconsistency = 25399909 72613911 72614770 954442 953583 NC_000014.9 velvet.60665 99.53 True relocation, scaffold gap is present, inconsistency = -10441 72621145 72624326 957649 954468 NC_000014.9 velvet.60665 100.0 True relocation, scaffold gap is present, inconsistency = -25403419 98021183 98022252 961030 959961 NC_000014.9 velvet.60665 99.72 True relocation, scaffold gap is present, inconsistency = 145140 97871844 97876032 961041 965230 NC_000014.9 velvet.60665 99.93 True fake: scaffold gap size wrong estimation (local) 97876638 97877605 966346 967313 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 97877754 97881408 967929 971572 NC_000014.9 velvet.60665 99.64 True relocation, scaffold gap is present, inconsistency = 140850 98022269 98026010 975324 971583 NC_000014.9 velvet.60665 99.92 True fake: scaffold gap size wrong estimation (local) 98000417 98002199 999614 997832 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (extensive) 97988828 97989959 1003819 1002688 NC_000014.9 velvet.60665 99.91 True relocation, scaffold gap is present, inconsistency = 98589 97881886 97889099 1004959 1012972 NC_000014.9 velvet.60665 99.96 True fake: scaffold gap size wrong estimation (local) 97892379 97899627 1012983 1020217 NC_000014.9 velvet.60665 99.52 True inversion, scaffold gap is present 97891067 97892263 1021424 1020228 NC_000014.9 velvet.60665 99.67 True fake: scaffold gap size wrong estimation (local) 97890009 97890982 1024045 1023072 NC_000014.9 velvet.60665 99.69 True relocation, scaffold gap is present, inconsistency = -125971 98010689 98013667 1029336 1026358 NC_000014.9 velvet.60665 99.9 True fake: scaffold gap size wrong estimation (local) 98009350 98010403 1031265 1030212 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 98007473 98009062 1033485 1031896 NC_000014.9 velvet.60665 99.37 True fake: scaffold gap size wrong estimation (local) 98006111 98007472 1035630 1034269 NC_000014.9 velvet.60665 99.41 True relocation, scaffold gap is present, inconsistency = 52208 97933371 97938461 1051072 1056587 NC_000014.9 velvet.60665 99.68 True relocation, scaffold gap is present, inconsistency = -35943 97902533 97903098 1056602 1057167 NC_000014.9 velvet.60665 100.0 True relocation, scaffold gap is present, inconsistency = 22803 97925912 97927987 1057178 1059253 NC_000014.9 velvet.60665 99.95 True fake: scaffold gap size wrong estimation (local) 97928279 97932180 1060329 1064250 NC_000014.9 velvet.60665 99.39 True fake: scaffold gap size wrong estimation (local) 97938479 97939786 1066155 1067462 NC_000014.9 velvet.60665 99.77 True fake: not a misassembly (possible transposable element) 97939788 97945162 1073361 1067987 NC_000014.9 velvet.60665 99.85 True fake: not a misassembly (possible transposable element) 97945196 97953617 1073373 1081794 NC_000014.9 velvet.60665 99.92 True fake: scaffold gap size wrong estimation (local) 97954033 97958034 1082967 1087021 NC_000014.9 velvet.60665 99.68 True fake: scaffold gap size wrong estimation (local) 97958214 97968313 1087943 1098037 NC_000014.9 velvet.60665 99.79 True relocation, scaffold gap is present, inconsistency = 32469 97924722 97925655 1099060 1098127 NC_000014.9 velvet.60665 99.79 True fake: scaffold gap size wrong estimation (local) 97921055 97924611 1103222 1099666 NC_000014.9 velvet.60665 99.94 True fake: scaffold gap size wrong estimation (local) 97919795 97920868 1105162 1104089 NC_000014.9 velvet.60665 99.81 True fake: scaffold gap size wrong estimation (local) 97906223 97918669 1120473 1107116 NC_000014.9 velvet.60665 99.76 True relocation, scaffold gap is present, inconsistency = 49964 97969014 97970997 1120854 1122880 NC_000014.9 velvet.60665 99.8 True fake: scaffold gap size wrong estimation (local) 97971245 97976148 1123906 1128809 NC_000014.9 velvet.60665 99.92 True indel: indel (> 5bp) 97976185 97977393 1128828 1130036 NC_000014.9 velvet.60665 99.92 True indel: indel (<= 5bp) 97977396 97978358 1130037 1130999 NC_000014.9 velvet.60665 98.86 True fake: scaffold gap size wrong estimation (local) 97978359 97983224 1137382 1142247 NC_000014.9 velvet.60665 99.65 True fake: scaffold gap size wrong estimation (local) 97983225 97987471 1142461 1146707 NC_000014.9 velvet.60665 99.39 True fake: scaffold gap size wrong estimation (local) 97987472 97988583 1146818 1147929 NC_000014.9 velvet.60665 98.02 True fake: scaffold gap size wrong estimation (local) 97990295 98000426 1150284 1160415 NC_000014.9 velvet.60665 99.91 True relocation, scaffold gap is present, inconsistency = -169555 97831086 97834172 1160630 1163716 NC_000014.9 velvet.60665 99.61 True fake: scaffold gap size wrong estimation (local) 97834472 97835188 1164835 1165551 NC_000014.9 velvet.60665 99.86 True relocation, scaffold gap is present, inconsistency = 33837 97869036 97871793 1168309 1165562 NC_000014.9 velvet.60665 99.53 True relocation, scaffold gap is present, inconsistency = 74772756 23091913 23096269 1168320 1172675 NC_000014.9 velvet.60665 99.98 True fake: scaffold gap size wrong estimation (local) 23096683 23098672 1173926 1175915 NC_000014.9 velvet.60665 100.0 True relocation, scaffold gap is present, inconsistency = -11619 23087064 23089111 1175926 1177940 NC_000014.9 velvet.60665 98.28 True fake: scaffold gap size wrong estimation (local) 23089340 23090936 1178811 1180407 NC_000014.9 velvet.60665 99.94 True fake: scaffold gap size wrong estimation (extensive) 23100165 23103349 1181988 1185172 NC_000014.9 velvet.60665 99.91 True fake: scaffold gap size wrong estimation (local) 23103607 23105779 1186282 1188443 NC_000014.9 velvet.60665 97.85 True relocation, scaffold gap is present, inconsistency = 74755578 97862862 97867960 1195526 1189948 NC_000014.9 velvet.60665 99.98 True fake: scaffold gap size wrong estimation (local) 97862177 97862731 1196356 1195802 NC_000014.9 velvet.60665 99.82 True relocation, scaffold gap is present, inconsistency = 74761637 23098955 23099576 1197320 1197941 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 23106238 23107167 1199930 1200859 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 23108886 23110153 1203635 1204859 NC_000014.9 velvet.60665 96.42 True inversion, scaffold gap is present 23110789 23111551 1205632 1204870 NC_000014.9 velvet.60665 100.0 True relocation, scaffold gap is present, inconsistency = -74753916 97858718 97861519 1211619 1208818 NC_000014.9 velvet.60665 99.79 True fake: scaffold gap size wrong estimation (local) 97856804 97858409 1214240 1212632 NC_000014.9 velvet.60665 99.32 True fake: scaffold gap size wrong estimation (local) 97849455 97856564 1222784 1214936 NC_000014.9 velvet.60665 99.75 True fake: scaffold gap size wrong estimation (local) 97847690 97849131 1225410 1223988 NC_000014.9 velvet.60665 98.67 True fake: scaffold gap size wrong estimation (local) 97842402 97844829 1228483 1226140 NC_000014.9 velvet.60665 96.47 True local misassembly 97845479 97847451 1230501 1228529 NC_000014.9 velvet.60665 99.95 True fake: scaffold gap size wrong estimation (local) 97840683 97842322 1232150 1230512 NC_000014.9 velvet.60665 99.88 True fake: scaffold gap size wrong estimation (local) 97824765 97825916 1245182 1244042 NC_000014.9 velvet.60665 98.61 True fake: scaffold gap size wrong estimation (local) 97821773 97824628 1248888 1246033 NC_000014.9 velvet.60665 99.75 True fake: scaffold gap size wrong estimation (local) 97817951 97819425 1253412 1251933 NC_000014.9 velvet.60665 99.19 True relocation, scaffold gap is present, inconsistency = 29473578 68339388 68344362 1253423 1259165 NC_000014.9 velvet.60665 99.74 True fake: scaffold gap size wrong estimation (local) 68344976 68345673 1259939 1260636 NC_000014.9 velvet.60665 99.86 True inversion, scaffold gap is present 68345889 68348618 1263376 1260647 NC_000014.9 velvet.60665 99.78 True relocation, scaffold gap is present, inconsistency = -29464661 97788429 97790594 1285497 1283332 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 97745765 97753657 1324667 1316686 NC_000014.9 velvet.60665 99.87 True relocation, scaffold gap is present, inconsistency = 74742237 23002796 23003517 1325399 1324678 NC_000014.9 velvet.60665 99.86 True relocation, scaffold gap is present, inconsistency = 65337923 88341933 88343606 1325892 1327565 NC_000014.9 velvet.60665 100.0 True fake: not a misassembly (possible transposable element) 88309540 88310135 1328186 1327591 NC_000014.9 velvet.60665 99.83 True fake: not a misassembly (possible transposable element) 88339007 88341505 1329637 1332135 NC_000014.9 velvet.60665 100.0 True relocation, scaffold gap is present, inconsistency = 9401616 97743627 97745035 1334087 1332641 NC_000014.9 velvet.60665 96.96 True fake: scaffold gap size wrong estimation (local) 97740973 97743419 1337696 1335250 NC_000014.9 velvet.60665 99.88 True relocation, scaffold gap is present, inconsistency = 9392697 88344330 88347006 1338966 1341642 NC_000014.9 velvet.60665 99.96 True fake: scaffold gap size wrong estimation (local) 88347806 88349414 1343175 1344783 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 88349684 88354153 1345816 1350285 NC_000014.9 velvet.60665 99.98 True relocation, scaffold gap is present, inconsistency = 15730006 104086072 104089015 1355141 1352198 NC_000014.9 velvet.60665 99.9 True fake: scaffold gap size wrong estimation (local) 104084152 104085404 1358130 1356878 NC_000014.9 velvet.60665 99.92 True fake: scaffold gap size wrong estimation (local) 104077764 104079108 1359516 1358141 NC_000014.9 velvet.60665 97.6 True relocation, scaffold gap is present, inconsistency = 15720797 88354589 88355574 1360909 1361894 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 88356372 88360411 1363198 1368099 NC_000014.9 velvet.60665 99.04 True relocation, scaffold gap is present, inconsistency = 15699891 104066310 104067115 1374913 1374107 NC_000014.9 velvet.60665 98.76 True local misassembly 104069834 104070788 1375878 1374924 NC_000014.9 velvet.60665 98.95 True local misassembly 104067983 104069833 1378103 1376253 NC_000014.9 velvet.60665 99.08 True fake: scaffold gap size wrong estimation (local) 104063407 104065222 1379905 1378114 NC_000014.9 velvet.60665 98.5 True relocation, scaffold gap is present, inconsistency = 15681867 88379388 88381529 1379916 1382057 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 88381842 88383009 1382926 1384093 NC_000014.9 velvet.60665 100.0 True indel: indel (> 5bp) 88383077 88383739 1384094 1384756 NC_000014.9 velvet.60665 98.19 True fake: scaffold gap size wrong estimation (local) 88383740 88385935 1387570 1389765 NC_000014.9 velvet.60665 99.82 True indel: indel (<= 5bp) 88385937 88387976 1389766 1391805 NC_000014.9 velvet.60665 100.0 True relocation, scaffold gap is present, inconsistency = 9943 88401187 88401817 1395703 1395073 NC_000014.9 velvet.60665 100.0 True inversion, scaffold gap is present 88403358 88404467 1395714 1396823 NC_000014.9 velvet.60665 99.91 True fake: scaffold gap size wrong estimation (local) 88404730 88406201 1397938 1399409 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 88437234 88440733 1429436 1432935 NC_000014.9 velvet.60665 99.97 True relocation, scaffold gap is present, inconsistency = -26120 88417570 88418556 1435892 1436878 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 88418777 88419456 1437660 1438339 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 88421144 88421696 1440458 1441010 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 88421970 88423341 1441288 1442659 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 88423867 88434442 1443733 1455215 NC_000014.9 velvet.60665 99.94 True fake: scaffold gap size wrong estimation (local) 88434734 88436895 1456442 1458609 NC_000014.9 velvet.60665 99.81 True fake: scaffold gap size wrong estimation (local) 88461840 88463870 1478624 1480654 NC_000014.9 velvet.60665 100.0 True relocation, scaffold gap is present, inconsistency = -9063 88454818 88455762 1480665 1481609 NC_000014.9 velvet.60665 99.89 True fake: scaffold gap size wrong estimation (local) 88465476 88472794 1490984 1498485 NC_000014.9 velvet.60665 99.92 True fake: scaffold gap size wrong estimation (local) 88490305 88494759 1515247 1519701 NC_000014.9 velvet.60665 99.96 True relocation, scaffold gap is present, inconsistency = -22135 88474163 88474873 1521240 1521950 NC_000014.9 velvet.60665 99.44 True fake: scaffold gap size wrong estimation (local) 88475117 88477312 1523087 1525282 NC_000014.9 velvet.60665 99.95 True fake: scaffold gap size wrong estimation (local) 88483237 88484060 1525298 1526121 NC_000014.9 velvet.60665 100.0 True local misassembly 88477476 88482402 1526291 1531291 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 88484246 88486722 1534021 1536398 NC_000014.9 velvet.60665 95.91 True fake: scaffold gap size wrong estimation (local) 88486971 88489444 1537525 1539877 NC_000014.9 velvet.60665 95.02 True relocation, scaffold gap is present, inconsistency = 16356023 72099398 72100222 1571427 1570603 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 72092640 72095984 1575516 1572148 NC_000014.9 velvet.60665 98.76 True inversion, scaffold gap is present 72087421 72092157 1575527 1580476 NC_000014.9 velvet.60665 99.38 True relocation, scaffold gap is present, inconsistency = 15341733 56743871 56744787 1582293 1581377 NC_000014.9 velvet.60665 99.67 True fake: scaffold gap size wrong estimation (local) 56739358 56741073 1587232 1585517 NC_000014.9 velvet.60665 99.94 True relocation, scaffold gap is present, inconsistency = -31853138 88591371 88592485 1588335 1587243 NC_000014.9 velvet.60665 97.74 True relocation, scaffold gap is present, inconsistency = 7447847 81131000 81134153 1600859 1597706 NC_000014.9 velvet.60665 99.94 True relocation, scaffold gap is present, inconsistency = 9043651 72079202 72087167 1601041 1609886 NC_000014.9 velvet.60665 99.87 True relocation, scaffold gap is present, inconsistency = 15355972 56719842 56723219 1613303 1609897 NC_000014.9 velvet.60665 98.62 True relocation, scaffold gap is present, inconsistency = -31843080 88559664 88561624 1616561 1614601 NC_000014.9 velvet.60665 99.85 True fake: scaffold gap size wrong estimation (local) 88558813 88559466 1618578 1617925 NC_000014.9 velvet.60665 99.69 True relocation, scaffold gap is present, inconsistency = -12102 88567388 88570144 1622102 1619349 NC_000014.9 velvet.60665 99.82 True relocation, scaffold gap is present, inconsistency = 7424586 81142325 81142791 1622620 1622113 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 81141083 81142126 1623968 1622884 NC_000014.9 velvet.60665 100.0 True relocation, scaffold gap is present, inconsistency = -7425581 88566152 88566653 1624480 1623979 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 88561698 88565177 1629740 1626261 NC_000014.9 velvet.60665 99.91 True relocation, scaffold gap is present, inconsistency = 33665199 54893079 54896488 1629751 1633158 NC_000014.9 velvet.60665 99.82 True relocation, scaffold gap is present, inconsistency = 1817095 56713594 56717363 1636938 1633169 NC_000014.9 velvet.60665 99.84 True fake: scaffold gap size wrong estimation (local) 56712204 56713363 1639209 1638050 NC_000014.9 velvet.60665 99.83 True relocation, scaffold gap is present, inconsistency = -24428641 81138458 81140834 1641596 1639220 NC_000014.9 velvet.60665 99.92 True relocation, scaffold gap is present, inconsistency = -7419074 88554703 88557521 1644425 1641607 NC_000014.9 velvet.60665 99.93 True fake: scaffold gap size wrong estimation (local) 88550182 88554580 1649705 1645307 NC_000014.9 velvet.60665 99.93 True fake: scaffold gap size wrong estimation (local) 88546577 88549658 1654061 1650985 NC_000014.9 velvet.60665 99.77 True fake: scaffold gap size wrong estimation (local) 88545094 88545689 1656217 1655622 NC_000014.9 velvet.60665 99.83 True relocation, scaffold gap is present, inconsistency = 10842 88532278 88534241 1658219 1656228 NC_000014.9 velvet.60665 98.44 True fake: scaffold gap size wrong estimation (local) 88529974 88530772 1661331 1660533 NC_000014.9 velvet.60665 98.62 True relocation, scaffold gap is present, inconsistency = 16338334 72188486 72191406 1664485 1661565 NC_000014.9 velvet.60665 99.83 True fake: scaffold gap size wrong estimation (local) 72156456 72157861 1695286 1693881 NC_000014.9 velvet.60665 99.79 True fake: scaffold gap size wrong estimation (local) 72153881 72156201 1698718 1696321 NC_000014.9 velvet.60665 95.61 True relocation, scaffold gap is present, inconsistency = 25915938 46235844 46237932 1698729 1700817 NC_000014.9 velvet.60665 100.0 True fake: not a misassembly (possible transposable element) 72143354 72144730 1702235 1700859 NC_000014.9 velvet.60665 99.93 True fake: not a misassembly (possible transposable element) 46238544 46249359 1702246 1713255 NC_000014.9 velvet.60665 98.92 True relocation, scaffold gap is present, inconsistency = -15401745 30847625 30851120 1713266 1716761 NC_000014.9 velvet.60665 99.91 True relocation, scaffold gap is present, inconsistency = 41272082 72123213 72132263 1725821 1716772 NC_000014.9 velvet.60665 99.83 True relocation, scaffold gap is present, inconsistency = -18673 72136691 72141875 1731063 1725832 NC_000014.9 velvet.60665 99.88 True fake: scaffold gap size wrong estimation (local) 72118160 72122965 1751757 1746893 NC_000014.9 velvet.60665 99.94 True fake: scaffold gap size wrong estimation (local) 72116968 72117506 1753176 1752638 NC_000014.9 velvet.60665 99.63 True fake: scaffold gap size wrong estimation (local) 72101167 72116678 1769712 1754191 NC_000014.9 velvet.60665 99.85 True relocation, scaffold gap is present, inconsistency = 15389842 56706855 56711314 1769723 1774182 NC_000014.9 velvet.60665 99.96 True relocation, scaffold gap is present, inconsistency = 24422741 81134414 81138207 1774541 1778334 NC_000014.9 velvet.60665 99.97 True relocation, scaffold gap is present, inconsistency = -15886 81122332 81122872 1778345 1778885 NC_000014.9 velvet.60665 99.82 True fake: scaffold gap size wrong estimation (local) 81123160 81130736 1779337 1787780 NC_000014.9 velvet.60665 99.04 True relocation, scaffold gap is present, inconsistency = 9052360 72067446 72068123 1791134 1790457 NC_000014.9 velvet.60665 99.85 True fake: scaffold gap size wrong estimation (local) 72065943 72066935 1792463 1791474 NC_000014.9 velvet.60665 99.6 True fake: scaffold gap size wrong estimation (local) 72059168 72065754 1800164 1793493 NC_000014.9 velvet.60665 99.83 True fake: scaffold gap size wrong estimation (local) 72057319 72058913 1802660 1801019 NC_000014.9 velvet.60665 100.0 True fake: scaffold gap size wrong estimation (local) 72053400 72057052 1807164 1803517 NC_000014.9 velvet.60665 99.75 True fake: scaffold gap size wrong estimation (local) 72047944 72052919 1813527 1808451 NC_000014.9 velvet.60665 99.94 True fake: scaffold gap size wrong estimation (local) 72044830 72047797 1817384 1814418 NC_000014.9 velvet.60665 99.93 True fake: scaffold gap size wrong estimation (local) 72018195 72021454 1851198 1847367 NC_000014.9 velvet.60665 99.88 True CONTIG velvet.60665 1851263 misassembled 92190051 92192090 2040 1 NC_000014.9 velvet.60674 99.75 True fake: scaffold gap size wrong estimation (local) 92187932 92189931 5054 3055 NC_000014.9 velvet.60674 99.95 True relocation, scaffold gap is present, inconsistency = -31135 92184641 92185254 39480 38867 NC_000014.9 velvet.60674 99.67 True fake: scaffold gap size wrong estimation (local) 92181340 92182593 43676 42423 NC_000014.9 velvet.60674 99.84 True fake: scaffold gap size wrong estimation (local) 92154056 92155645 67155 65566 NC_000014.9 velvet.60674 99.94 True fake: scaffold gap size wrong estimation (local) 92152674 92153662 70722 69734 NC_000014.9 velvet.60674 100.0 True fake: scaffold gap size wrong estimation (local) 92150377 92151107 73861 73131 NC_000014.9 velvet.60674 100.0 True fake: scaffold gap size wrong estimation (local) 92121138 92121791 106272 105619 NC_000014.9 velvet.60674 99.85 True CONTIG velvet.60674 113787 misassembled 65685620 65688543 2850 1 NC_000014.9 velvet.60677 97.23 True fake: scaffold gap size wrong estimation (local) 65683284 65685471 5983 3685 NC_000014.9 velvet.60677 99.95 True fake: scaffold gap size wrong estimation (local) 65675983 65682355 14034 7589 NC_000014.9 velvet.60677 100.0 True fake: scaffold gap size wrong estimation (local) 65668454 65672484 18370 14255 NC_000014.9 velvet.60677 98.96 True relocation, scaffold gap is present, inconsistency = -7261 65672530 65675704 21582 18381 NC_000014.9 velvet.60677 98.81 True fake: scaffold gap size wrong estimation (local) 65650731 65654349 36641 33023 NC_000014.9 velvet.60677 100.0 True relocation, scaffold gap is present, inconsistency = -17524 65666747 65667717 38149 37179 NC_000014.9 velvet.60677 99.9 True local misassembly 65665872 65666737 39117 38252 NC_000014.9 velvet.60677 99.88 True fake: scaffold gap size wrong estimation (local) 65662287 65665636 43456 40107 NC_000014.9 velvet.60677 99.97 True fake: scaffold gap size wrong estimation (local) 65657817 65662141 50168 45844 NC_000014.9 velvet.60677 99.7 True fake: scaffold gap size wrong estimation (local) 65655476 65656057 53239 52658 NC_000014.9 velvet.60677 100.0 True fake: scaffold gap size wrong estimation (local) 65644643 65649984 59224 53613 NC_000014.9 velvet.60677 100.0 True fake: scaffold gap size wrong estimation (local) 65643689 65644293 60761 60157 NC_000014.9 velvet.60677 100.0 True fake: scaffold gap size wrong estimation (local) 65642599 65643372 61876 61103 NC_000014.9 velvet.60677 100.0 True fake: scaffold gap size wrong estimation (local) 65636404 65642319 68639 62722 NC_000014.9 velvet.60677 99.98 True fake: scaffold gap size wrong estimation (local) 65635346 65635924 70502 69924 NC_000014.9 velvet.60677 99.83 True fake: scaffold gap size wrong estimation (local) 65610669 65611180 97368 96857 NC_000014.9 velvet.60677 100.0 True relocation, scaffold gap is present, inconsistency = -12974 65623011 65623632 97990 97379 NC_000014.9 velvet.60677 98.34 True fake: scaffold gap size wrong estimation (local) 65622090 65622896 99005 98199 NC_000014.9 velvet.60677 100.0 True fake: scaffold gap size wrong estimation (local) 65618046 65621256 103759 100549 NC_000014.9 velvet.60677 99.97 True fake: scaffold gap size wrong estimation (local) 65614113 65617659 108499 104897 NC_000014.9 velvet.60677 98.36 True fake: not a misassembly (possible transposable element) 70592604 70595096 111002 108510 NC_000014.9 velvet.60677 99.96 True fake: not a misassembly (possible transposable element) 65611934 65613860 112978 111052 NC_000014.9 velvet.60677 100.0 True relocation, scaffold gap is present, inconsistency = 4894868 70513168 70520536 117418 124785 NC_000014.9 velvet.60677 99.88 True relocation, scaffold gap is present, inconsistency = -4923027 65599091 65602344 126367 129620 NC_000014.9 velvet.60677 99.91 True fake: scaffold gap size wrong estimation (local) 65602694 65603257 130770 131318 NC_000014.9 velvet.60677 97.11 True fake: scaffold gap size wrong estimation (local) 65606373 65607810 135395 136832 NC_000014.9 velvet.60677 100.0 True fake: scaffold gap size wrong estimation (local) 65608087 65609042 137587 138542 NC_000014.9 velvet.60677 100.0 True relocation, scaffold gap is present, inconsistency = -27883403 37725650 37727312 138553 140215 NC_000014.9 velvet.60677 100.0 True fake: scaffold gap size wrong estimation (local) 37727591 37728325 140541 141278 NC_000014.9 velvet.60677 99.32 True fake: scaffold gap size wrong estimation (local) 37728459 37732195 142097 145833 NC_000014.9 velvet.60677 99.92 True fake: scaffold gap size wrong estimation (local) 37732881 37736132 147265 150516 NC_000014.9 velvet.60677 99.66 True fake: scaffold gap size wrong estimation (local) 37736268 37739323 150767 154520 NC_000014.9 velvet.60677 99.61 True fake: scaffold gap size wrong estimation (local) 37740484 37741298 155771 156585 NC_000014.9 velvet.60677 99.51 True fake: scaffold gap size wrong estimation (local) 37761023 37762713 170877 172567 NC_000014.9 velvet.60677 100.0 True relocation, scaffold gap is present, inconsistency = 27846225 65609326 65610405 172955 174034 NC_000014.9 velvet.60677 100.0 True relocation, scaffold gap is present, inconsistency = -27868826 37741590 37742476 174045 174931 NC_000014.9 velvet.60677 99.66 True fake: scaffold gap size wrong estimation (local) 37773288 37773860 204013 204585 NC_000014.9 velvet.60677 99.83 True relocation, scaffold gap is present, inconsistency = -14435 37763190 37764953 208350 210113 NC_000014.9 velvet.60677 99.94 True fake: scaffold gap size wrong estimation (local) 37765358 37766630 211526 212767 NC_000014.9 velvet.60677 97.23 True relocation, scaffold gap is present, inconsistency = -7685832 30087222 30089476 219191 221445 NC_000014.9 velvet.60677 99.87 True fake: scaffold gap size wrong estimation (local) 30094163 30094850 229618 230305 NC_000014.9 velvet.60677 100.0 True relocation, scaffold gap is present, inconsistency = 35528415 65623727 65624828 230767 231910 NC_000014.9 velvet.60677 100.0 True fake: scaffold gap size wrong estimation (local) 65625103 65631651 232697 239328 NC_000014.9 velvet.60677 99.45 True fake: scaffold gap size wrong estimation (local) 65632362 65632900 240892 241432 NC_000014.9 velvet.60677 99.63 True relocation, scaffold gap is present, inconsistency = 4848182 70484183 70485507 245857 244533 NC_000014.9 velvet.60677 100.0 True relocation, scaffold gap is present, inconsistency = 26706252 97191770 97192400 245868 246493 NC_000014.9 velvet.60677 99.21 True fake: scaffold gap size wrong estimation (local) 97194105 97194727 249666 250288 NC_000014.9 velvet.60677 97.11 True relocation, scaffold gap is present, inconsistency = 136118 97330921 97333398 252759 250364 NC_000014.9 velvet.60677 96.68 True fake: scaffold gap size wrong estimation (local) 97327129 97330548 257423 253972 NC_000014.9 velvet.60677 99.02 True relocation, scaffold gap is present, inconsistency = 127587 97196545 97197297 259668 260421 NC_000014.9 velvet.60677 99.73 True fake: scaffold gap size wrong estimation (local) 97197581 97202636 261402 266457 NC_000014.9 velvet.60677 99.96 True fake: scaffold gap size wrong estimation (local) 97202901 97204781 267368 269248 NC_000014.9 velvet.60677 100.0 True fake: scaffold gap size wrong estimation (local) 97204929 97213091 270058 279008 NC_000014.9 velvet.60677 99.96 True fake: scaffold gap size wrong estimation (local) 97213293 97215635 280067 282370 NC_000014.9 velvet.60677 98.33 True fake: not a misassembly (possible transposable element) 70470506 70475202 289961 285050 NC_000014.9 velvet.60677 99.66 True fake: not a misassembly (possible transposable element) 97226976 97228435 290941 292400 NC_000014.9 velvet.60677 99.93 True fake: scaffold gap size wrong estimation (local) 97228656 97233018 293227 297589 NC_000014.9 velvet.60677 99.98 True fake: scaffold gap size wrong estimation (extensive) 97240393 97241381 297950 298938 NC_000014.9 velvet.60677 100.0 True relocation, scaffold gap is present, inconsistency = -8088 97233304 97235733 298949 301378 NC_000014.9 velvet.60677 100.0 True relocation, scaffold gap is present, inconsistency = 87933 97323677 97324609 302321 301389 NC_000014.9 velvet.60677 100.0 True fake: scaffold gap size wrong estimation (local) 97321499 97322767 305401 304133 NC_000014.9 velvet.60677 99.21 True relocation, scaffold gap is present, inconsistency = 15011 97303078 97306101 308811 305788 NC_000014.9 velvet.60677 99.77 True fake: scaffold gap size wrong estimation (local) 97290447 97302898 323881 309781 NC_000014.9 velvet.60677 99.85 True relocation, scaffold gap is present, inconsistency = 44860 97241409 97245374 324094 328059 NC_000014.9 velvet.60677 99.95 True relocation, scaffold gap is present, inconsistency = 12110 97264665 97269539 340083 335240 NC_000014.9 velvet.60677 99.36 True fake: scaffold gap size wrong estimation (local) 97263715 97264364 341603 340954 NC_000014.9 velvet.60677 100.0 True fake: scaffold gap size wrong estimation (local) 97261434 97263430 344188 342192 NC_000014.9 velvet.60677 100.0 True fake: scaffold gap size wrong estimation (local) 97260296 97261110 346363 345549 NC_000014.9 velvet.60677 99.88 True relocation, scaffold gap is present, inconsistency = -51813 97309453 97312098 349019 346374 NC_000014.9 velvet.60677 99.96 True relocation, scaffold gap is present, inconsistency = 53925 97245406 97255517 349030 359230 NC_000014.9 velvet.60677 99.06 True relocation, scaffold gap is present, inconsistency = 12776 97278510 97280357 371294 369447 NC_000014.9 velvet.60677 99.89 True relocation, scaffold gap is present, inconsistency = -11284 97288269 97289783 372819 371305 NC_000014.9 velvet.60677 99.87 True fake: scaffold gap size wrong estimation (local) 97284550 97288040 377609 373652 NC_000014.9 velvet.60677 99.97 True fake: scaffold gap size wrong estimation (local) 97280612 97284256 382056 378412 NC_000014.9 velvet.60677 99.92 True inversion, scaffold gap is present 97269623 97278520 382067 391716 NC_000014.9 velvet.60677 99.6 True relocation, scaffold gap is present, inconsistency = 26826491 70436708 70443035 398140 391813 NC_000014.9 velvet.60677 99.86 True relocation, scaffold gap is present, inconsistency = 3490271 66942285 66946426 402293 398151 NC_000014.9 velvet.60677 99.98 True fake: scaffold gap size wrong estimation (local) 66937570 66942048 407680 403202 NC_000014.9 velvet.60677 99.93 True relocation, scaffold gap is present, inconsistency = 6007078 72949738 72951035 408292 409588 NC_000014.9 velvet.60677 99.92 True fake: scaffold gap size wrong estimation (local) 72951637 72952688 410766 411816 NC_000014.9 velvet.60677 99.9 True relocation, scaffold gap is present, inconsistency = -48501338 24454014 24462394 414480 422899 NC_000014.9 velvet.60677 99.28 True fake: scaffold gap size wrong estimation (local) 24462866 24465147 424192 426468 NC_000014.9 velvet.60677 99.04 True fake: scaffold gap size wrong estimation (local) 24465261 24469375 426479 431523 NC_000014.9 velvet.60677 99.61 True relocation, scaffold gap is present, inconsistency = 42416666 66895478 66904097 450702 440960 NC_000014.9 velvet.60677 98.89 True relocation, scaffold gap is present, inconsistency = 42380431 24500180 24503625 462124 465568 NC_000014.9 velvet.60677 99.42 True local misassembly 24497935 24500163 465599 467828 NC_000014.9 velvet.60677 99.69 True relocation, scaffold gap is present, inconsistency = 25738927 50267589 50268122 496327 496860 NC_000014.9 velvet.60677 100.0 True fake: scaffold gap size wrong estimation (local) 50268473 50270518 497576 499621 NC_000014.9 velvet.60677 100.0 True fake: scaffold gap size wrong estimation (local) 50270810 50271597 500336 501123 NC_000014.9 velvet.60677 100.0 True fake: scaffold gap size wrong estimation (local) 50272096 50273919 502047 503840 NC_000014.9 velvet.60677 98.24 True relocation, scaffold gap is present, inconsistency = 8477423 41784900 41792076 515366 506437 NC_000014.9 velvet.60677 99.93 True fake: scaffold gap size wrong estimation (local) 41781670 41784609 519381 516380 NC_000014.9 velvet.60677 99.97 True fake: scaffold gap size wrong estimation (local) 41775316 41781492 526413 520240 NC_000014.9 velvet.60677 99.89 True fake: scaffold gap size wrong estimation (local) 41765358 41775080 537127 527405 NC_000014.9 velvet.60677 99.88 True fake: scaffold gap size wrong estimation (local) 41763829 41765060 539361 538157 NC_000014.9 velvet.60677 97.81 True relocation, scaffold gap is present, inconsistency = 17077898 24678492 24685920 539372 546804 NC_000014.9 velvet.60677 99.91 True fake: scaffold gap size wrong estimation (local) 24686837 24692191 548535 554178 NC_000014.9 velvet.60677 99.92 True fake: scaffold gap size wrong estimation (local) 24692712 24696123 555471 558882 NC_000014.9 velvet.60677 100.0 True fake: scaffold gap size wrong estimation (local) 24719694 24723503 576205 580014 NC_000014.9 velvet.60677 99.95 True relocation, scaffold gap is present, inconsistency = -12819 24710695 24711600 580025 580930 NC_000014.9 velvet.60677 100.0 True fake: scaffold gap size wrong estimation (local) 24711886 24719533 581995 590473 NC_000014.9 velvet.60677 99.82 True relocation, scaffold gap is present, inconsistency = 45894699 70614245 70615806 592044 590486 NC_000014.9 velvet.60677 99.36 True fake: scaffold gap size wrong estimation (local) 70612410 70613570 594203 593043 NC_000014.9 velvet.60677 99.91 True fake: scaffold gap size wrong estimation (local) 70608563 70612327 598929 595221 NC_000014.9 velvet.60677 98.46 True fake: scaffold gap size wrong estimation (local) 70607452 70608182 600898 600168 NC_000014.9 velvet.60677 100.0 True relocation, scaffold gap is present, inconsistency = -32127 70637039 70639448 603437 601029 NC_000014.9 velvet.60677 99.71 True fake: scaffold gap size wrong estimation (local) 70606016 70607111 630801 629706 NC_000014.9 velvet.60677 99.73 True fake: scaffold gap size wrong estimation (local) 70598457 70605066 639937 632464 NC_000014.9 velvet.60677 99.91 True fake: scaffold gap size wrong estimation (local) 70595146 70597970 644036 641212 NC_000014.9 velvet.60677 99.89 True fake: scaffold gap size wrong estimation (local) 70585598 70588403 646874 644069 NC_000014.9 velvet.60677 99.93 True relocation, scaffold gap is present, inconsistency = 45847381 24737368 24738206 646885 647721 NC_000014.9 velvet.60677 99.52 True fake: scaffold gap size wrong estimation (local) 24738308 24739719 647862 649288 NC_000014.9 velvet.60677 97.28 True fake: scaffold gap size wrong estimation (local) 24739801 24747635 650296 659006 NC_000014.9 velvet.60677 99.51 True relocation, scaffold gap is present, inconsistency = 40247618 64996269 64996787 660022 660540 NC_000014.9 velvet.60677 100.0 True relocation, scaffold gap is present, inconsistency = -16218134 48780840 48784070 662727 665957 NC_000014.9 velvet.60677 99.88 True relocation, scaffold gap is present, inconsistency = -24031867 24752214 24753813 665968 667567 NC_000014.9 velvet.60677 100.0 True relocation, scaffold gap is present, inconsistency = 45820942 70575403 70578738 671550 668215 NC_000014.9 velvet.60677 100.0 True relocation, scaffold gap is present, inconsistency = 23384063 47181497 47191329 671561 681393 NC_000014.9 velvet.60677 99.95 True fake: scaffold gap size wrong estimation (local) 47191460 47192400 681896 682836 NC_000014.9 velvet.60677 99.89 True relocation, scaffold gap is present, inconsistency = 13601903 33585069 33588629 687324 683764 NC_000014.9 velvet.60677 100.0 True fake: scaffold gap size wrong estimation (local) 33582971 33584383 690253 688841 NC_000014.9 velvet.60677 99.93 True fake: scaffold gap size wrong estimation (local) 33581835 33582970 691937 690802 NC_000014.9 velvet.60677 99.21 True relocation, scaffold gap is present, inconsistency = 37033151 70616323 70619367 692139 695123 NC_000014.9 velvet.60677 97.9 True relocation, scaffold gap is present, inconsistency = 7497021 63109375 63110372 705050 704053 NC_000014.9 velvet.60677 100.0 True relocation, scaffold gap is present, inconsistency = 38372662 24734221 24736702 707541 705061 NC_000014.9 velvet.60677 99.6 True relocation, scaffold gap is present, inconsistency = -22423375 47155980 47157585 709146 707552 NC_000014.9 velvet.60677 99.25 True local misassembly 47157715 47158358 709825 709157 NC_000014.9 velvet.60677 95.96 True fake: scaffold gap size wrong estimation (local) 47150926 47155841 716143 711086 NC_000014.9 velvet.60677 99.96 True relocation, scaffold gap is present, inconsistency = 22419666 24708579 24710650 738824 736753 NC_000014.9 velvet.60677 100.0 True fake: scaffold gap size wrong estimation (local) 24698847 24708279 750072 739855 NC_000014.9 velvet.60677 99.99 True CONTIG velvet.60677 750072 misassembled 62561505 62570456 251 9290 NC_000014.9 velvet.60702 99.96 True fake: scaffold gap size wrong estimation (local) 62570797 62571504 10385 11092 NC_000014.9 velvet.60702 100.0 True CONTIG velvet.60702 17747 correct 70459458 70460031 7024 7597 NC_000014.9 velvet.60719 99.83 True fake: scaffold gap size wrong estimation (local) 70462084 70463600 11195 12711 NC_000014.9 velvet.60719 99.74 True fake: scaffold gap size wrong estimation (local) 70465602 70466314 15418 16130 NC_000014.9 velvet.60719 99.44 True fake: scaffold gap size wrong estimation (local) 70467839 70468393 18827 19381 NC_000014.9 velvet.60719 100.0 True local misassembly 70466890 70467750 19537 20452 NC_000014.9 velvet.60719 99.65 True relocation, scaffold gap is present, inconsistency = -15913 70455051 70456081 23666 24696 NC_000014.9 velvet.60719 99.9 True fake: scaffold gap size wrong estimation (local) 70493685 70494222 62098 62635 NC_000014.9 velvet.60719 99.63 True fake: scaffold gap size wrong estimation (local) 70496435 70498672 65583 67820 NC_000014.9 velvet.60719 99.87 True relocation, scaffold gap is present, inconsistency = -1337245 69165999 69167108 72392 73501 NC_000014.9 velvet.60719 99.46 True fake: scaffold gap size wrong estimation (local) 69167820 69169610 75099 76889 NC_000014.9 velvet.60719 99.94 True fake: scaffold gap size wrong estimation (local) 69170220 69171947 78306 80033 NC_000014.9 velvet.60719 100.0 True fake: scaffold gap size wrong estimation (local) 69172206 69173280 80350 81419 NC_000014.9 velvet.60719 99.35 True fake: scaffold gap size wrong estimation (local) 69173544 69176275 82433 85268 NC_000014.9 velvet.60719 99.74 True relocation, scaffold gap is present, inconsistency = 1336655 70520699 70530027 93037 102456 NC_000014.9 velvet.60719 99.97 True fake: scaffold gap size wrong estimation (local) 70530134 70533078 103156 106090 NC_000014.9 velvet.60719 99.56 True fake: scaffold gap size wrong estimation (local) 70534140 70536210 107890 109960 NC_000014.9 velvet.60719 99.81 True fake: scaffold gap size wrong estimation (local) 70537003 70538837 111574 113408 NC_000014.9 velvet.60719 99.84 True CONTIG velvet.60719 115474 misassembled CONTIG velvet.60732 367 unaligned 93220224 93220939 30250 29535 NC_000014.9 velvet.60753 100.0 True relocation, scaffold gap is present, inconsistency = -9714 93225610 93226505 34578 33683 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 93223509 93224359 37858 37008 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 93219035 93219702 44029 43362 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 93217266 93217816 45617 45067 NC_000014.9 velvet.60753 99.82 True fake: scaffold gap size wrong estimation (local) 93215690 93216234 47894 47350 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 93214197 93215399 49819 48617 NC_000014.9 velvet.60753 99.92 True fake: scaffold gap size wrong estimation (local) 93211888 93213088 53076 51876 NC_000014.9 velvet.60753 99.92 True fake: scaffold gap size wrong estimation (local) 93210342 93211021 55812 55133 NC_000014.9 velvet.60753 98.53 True local misassembly 93209541 93210073 56345 55813 NC_000014.9 velvet.60753 98.12 True fake: not a misassembly (possible transposable element) 93132464 93133088 60693 61317 NC_000014.9 velvet.60753 100.0 True fake: not a misassembly (possible transposable element) 93206270 93208448 63919 61772 NC_000014.9 velvet.60753 98.52 True fake: scaffold gap size wrong estimation (local) 93204253 93205384 66698 65567 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 93202567 93204021 68607 67153 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 93200573 93201092 71446 70927 NC_000014.9 velvet.60753 98.08 True fake: scaffold gap size wrong estimation (local) 93196688 93197275 76135 75548 NC_000014.9 velvet.60753 100.0 True relocation, scaffold gap is present, inconsistency = 57848 93137651 93138829 76146 77323 NC_000014.9 velvet.60753 99.75 True fake: not a misassembly (possible transposable element) 54853248 54855308 77475 79535 NC_000014.9 velvet.60753 100.0 True fake: not a misassembly (possible transposable element) 93140791 93141501 80994 81698 NC_000014.9 velvet.60753 98.73 True fake: scaffold gap size wrong estimation (local) 93145808 93146647 87617 88458 NC_000014.9 velvet.60753 99.05 True local misassembly 93142596 93143400 89199 90003 NC_000014.9 velvet.60753 99.63 True fake: scaffold gap size wrong estimation (local) 93144815 93145518 92533 93236 NC_000014.9 velvet.60753 99.29 True fake: scaffold gap size wrong estimation (local) 93147544 93148202 96098 96756 NC_000014.9 velvet.60753 99.85 True fake: scaffold gap size wrong estimation (local) 93150208 93151515 99076 100383 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 93154761 93155535 103919 104693 NC_000014.9 velvet.60753 99.87 True fake: scaffold gap size wrong estimation (local) 93156600 93157706 106928 108034 NC_000014.9 velvet.60753 100.0 True local misassembly 93152771 93153601 108230 109054 NC_000014.9 velvet.60753 99.27 True fake: scaffold gap size wrong estimation (local) 93160199 93160997 109065 109863 NC_000014.9 velvet.60753 100.0 True local misassembly 93161386 93162207 109864 110685 NC_000014.9 velvet.60753 98.78 True fake: scaffold gap size wrong estimation (local) 93163329 93164062 113046 113779 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 93165851 93166401 118397 118947 NC_000014.9 velvet.60753 100.0 True relocation, scaffold gap is present, inconsistency = 38236150 54925172 54925789 123476 122859 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 54922342 54923622 127107 125827 NC_000014.9 velvet.60753 99.92 True fake: scaffold gap size wrong estimation (local) 54891542 54892411 152605 151736 NC_000014.9 velvet.60753 99.66 True fake: scaffold gap size wrong estimation (local) 54890486 54891051 154612 154047 NC_000014.9 velvet.60753 99.65 True fake: scaffold gap size wrong estimation (local) 54888797 54890220 156202 154779 NC_000014.9 velvet.60753 99.86 True fake: scaffold gap size wrong estimation (local) 54886605 54888501 159220 157322 NC_000014.9 velvet.60753 99.79 True fake: scaffold gap size wrong estimation (local) 54885696 54886315 160336 159721 NC_000014.9 velvet.60753 99.03 True relocation, scaffold gap is present, inconsistency = -38294729 93175605 93176141 165156 164620 NC_000014.9 velvet.60753 97.95 True fake: scaffold gap size wrong estimation (local) 93173529 93174608 167845 166766 NC_000014.9 velvet.60753 98.98 True local misassembly 93172221 93173001 168917 168137 NC_000014.9 velvet.60753 100.0 True inversion, scaffold gap is present 93179277 93180155 176301 177179 NC_000014.9 velvet.60753 98.86 True fake: scaffold gap size wrong estimation (local) 93181491 93182677 179457 180640 NC_000014.9 velvet.60753 99.66 True fake: scaffold gap size wrong estimation (local) 93182944 93185915 181237 184208 NC_000014.9 velvet.60753 99.97 True fake: scaffold gap size wrong estimation (local) 93186171 93187408 184945 186182 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 93188200 93189561 187678 189039 NC_000014.9 velvet.60753 99.93 True fake: scaffold gap size wrong estimation (local) 93190701 93191303 191154 191756 NC_000014.9 velvet.60753 99.83 True local misassembly 93191592 93192154 191757 192319 NC_000014.9 velvet.60753 97.87 True relocation, scaffold gap is present, inconsistency = 29172701 64017335 64018254 193875 192956 NC_000014.9 velvet.60753 100.0 True relocation, scaffold gap is present, inconsistency = -9739684 73751886 73757008 199073 193886 NC_000014.9 velvet.60753 99.78 True relocation, scaffold gap is present, inconsistency = 13062771 60686573 60689104 201615 199084 NC_000014.9 velvet.60753 100.0 True relocation, scaffold gap is present, inconsistency = -3326745 64010911 64013307 204021 201626 NC_000014.9 velvet.60753 99.96 True fake: scaffold gap size wrong estimation (local) 64009537 64010742 206019 204814 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 64007891 64009275 207909 206525 NC_000014.9 velvet.60753 100.0 True relocation, scaffold gap is present, inconsistency = 12629830 51374167 51375210 210760 212160 NC_000014.9 velvet.60753 99.42 True fake: scaffold gap size wrong estimation (local) 51375291 51376082 213612 214403 NC_000014.9 velvet.60753 99.75 True fake: scaffold gap size wrong estimation (local) 51376765 51377346 215269 215850 NC_000014.9 velvet.60753 99.48 True fake: scaffold gap size wrong estimation (local) 51378342 51381350 217547 220604 NC_000014.9 velvet.60753 99.97 True fake: scaffold gap size wrong estimation (local) 51381621 51385851 221700 225930 NC_000014.9 velvet.60753 99.86 True fake: scaffold gap size wrong estimation (local) 51390729 51391914 226416 227601 NC_000014.9 velvet.60753 99.58 True fake: scaffold gap size wrong estimation (local) 51391915 51393076 227716 228877 NC_000014.9 velvet.60753 97.68 True fake: scaffold gap size wrong estimation (local) 51393740 51399944 234425 240629 NC_000014.9 velvet.60753 99.97 True fake: scaffold gap size wrong estimation (local) 51400152 51402343 241020 243211 NC_000014.9 velvet.60753 99.91 True fake: scaffold gap size wrong estimation (local) 51402938 51405728 244719 248079 NC_000014.9 velvet.60753 95.68 True fake: scaffold gap size wrong estimation (local) 51418606 51419293 259597 260287 NC_000014.9 velvet.60753 98.97 True fake: scaffold gap size wrong estimation (local) 51419543 51420825 260465 261716 NC_000014.9 velvet.60753 97.35 True fake: scaffold gap size wrong estimation (local) 51421024 51435322 262749 277065 NC_000014.9 velvet.60753 99.73 True fake: scaffold gap size wrong estimation (local) 51435451 51436780 277934 279263 NC_000014.9 velvet.60753 99.7 True relocation, scaffold gap is present, inconsistency = -18750 51437603 51443958 298836 305192 NC_000014.9 velvet.60753 99.78 True fake: scaffold gap size wrong estimation (local) 51444229 51456237 306219 318540 NC_000014.9 velvet.60753 99.87 True fake: scaffold gap size wrong estimation (local) 51456652 51459579 319748 322675 NC_000014.9 velvet.60753 99.9 True fake: scaffold gap size wrong estimation (local) 51459912 51466983 323787 330879 NC_000014.9 velvet.60753 99.62 True fake: scaffold gap size wrong estimation (local) 51468332 51468951 332831 333450 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 51469645 51470270 334682 335307 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 51470509 51471237 335602 336330 NC_000014.9 velvet.60753 99.86 True fake: scaffold gap size wrong estimation (local) 51471518 51472345 336773 337600 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 51472595 51477727 338388 343616 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 51478027 51482693 344717 349383 NC_000014.9 velvet.60753 99.87 True fake: scaffold gap size wrong estimation (local) 51482991 51486067 350164 353304 NC_000014.9 velvet.60753 99.84 True fake: scaffold gap size wrong estimation (local) 51486329 51493329 353972 361529 NC_000014.9 velvet.60753 99.97 True fake: scaffold gap size wrong estimation (local) 51493630 51500274 361834 368599 NC_000014.9 velvet.60753 99.91 True fake: scaffold gap size wrong estimation (local) 51500573 51501584 369755 370788 NC_000014.9 velvet.60753 97.39 True fake: scaffold gap size wrong estimation (local) 51501779 51502347 371077 371644 NC_000014.9 velvet.60753 99.82 True fake: scaffold gap size wrong estimation (local) 51504176 51509270 377779 382852 NC_000014.9 velvet.60753 99.53 True fake: scaffold gap size wrong estimation (local) 51511898 51512627 386143 386872 NC_000014.9 velvet.60753 99.86 True fake: scaffold gap size wrong estimation (local) 51512648 51514337 388233 389982 NC_000014.9 velvet.60753 99.88 True local misassembly 51509806 51511714 390371 392326 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 51514775 51519027 393044 397338 NC_000014.9 velvet.60753 99.93 True fake: scaffold gap size wrong estimation (local) 51519243 51520836 398564 400171 NC_000014.9 velvet.60753 97.44 True indel: indel (> 5bp) 51520875 51525099 400235 404459 NC_000014.9 velvet.60753 99.88 True fake: scaffold gap size wrong estimation (local) 51525582 51530525 405714 410647 NC_000014.9 velvet.60753 99.7 True fake: not a misassembly (possible transposable element) 51550646 51551538 414009 414901 NC_000014.9 velvet.60753 100.0 True fake: not a misassembly (possible transposable element) 51530771 51532116 414912 416257 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 51532400 51536469 417081 421675 NC_000014.9 velvet.60753 96.95 True fake: scaffold gap size wrong estimation (local) 51536721 51546398 422783 432460 NC_000014.9 velvet.60753 99.99 True fake: scaffold gap size wrong estimation (local) 51546620 51549608 433107 436492 NC_000014.9 velvet.60753 99.93 True fake: scaffold gap size wrong estimation (local) 51555836 51557291 438368 439819 NC_000014.9 velvet.60753 99.59 True fake: scaffold gap size wrong estimation (local) 51558497 51560527 439830 441860 NC_000014.9 velvet.60753 99.9 True relocation, scaffold gap is present, inconsistency = -8808 51551730 51555567 441871 445708 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 51557293 51557902 448132 448741 NC_000014.9 velvet.60753 99.84 True fake: scaffold gap size wrong estimation (extensive) 51566167 51567405 448752 449990 NC_000014.9 velvet.60753 99.6 True local misassembly 51560785 51563417 450001 452633 NC_000014.9 velvet.60753 99.96 True fake: scaffold gap size wrong estimation (local) 51567407 51568861 452736 454190 NC_000014.9 velvet.60753 100.0 True local misassembly 51563657 51565910 454577 456830 NC_000014.9 velvet.60753 99.87 True fake: scaffold gap size wrong estimation (local) 51570115 51585834 458223 474052 NC_000014.9 velvet.60753 99.75 True fake: scaffold gap size wrong estimation (local) 51586117 51586616 474995 475494 NC_000014.9 velvet.60753 99.8 True fake: scaffold gap size wrong estimation (local) 51586996 51589822 476146 478965 NC_000014.9 velvet.60753 99.29 True fake: scaffold gap size wrong estimation (local) 51590094 51591616 479931 481453 NC_000014.9 velvet.60753 99.74 True fake: scaffold gap size wrong estimation (local) 51599152 51603956 485052 490628 NC_000014.9 velvet.60753 99.71 True relocation, scaffold gap is present, inconsistency = 10754465 62363817 62365193 496024 497350 NC_000014.9 velvet.60753 95.84 True fake: scaffold gap size wrong estimation (local) 62365798 62366943 497840 498985 NC_000014.9 velvet.60753 99.74 True fake: scaffold gap size wrong estimation (local) 62367690 62376269 500431 508956 NC_000014.9 velvet.60753 99.28 True fake: scaffold gap size wrong estimation (local) 62376529 62380350 510042 513863 NC_000014.9 velvet.60753 99.92 True fake: scaffold gap size wrong estimation (local) 62380641 62383988 514918 518265 NC_000014.9 velvet.60753 99.97 True fake: scaffold gap size wrong estimation (local) 62384123 62385178 519258 520313 NC_000014.9 velvet.60753 100.0 True relocation, scaffold gap is present, inconsistency = -4634755 57750434 57752491 520324 522373 NC_000014.9 velvet.60753 99.27 True fake: scaffold gap size wrong estimation (local) 57752765 57754120 523179 524534 NC_000014.9 velvet.60753 100.0 True relocation, scaffold gap is present, inconsistency = 4623446 62385465 62386447 532433 533415 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 62386923 62390164 533856 537142 NC_000014.9 velvet.60753 98.6 True fake: scaffold gap size wrong estimation (local) 62390454 62394301 538213 542060 NC_000014.9 velvet.60753 99.92 True fake: scaffold gap size wrong estimation (local) 62394594 62395653 543274 544333 NC_000014.9 velvet.60753 99.91 True fake: scaffold gap size wrong estimation (local) 62404361 62406066 551441 553146 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 62406251 62406928 553452 554129 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 62407204 62417191 555029 565441 NC_000014.9 velvet.60753 99.92 True relocation, scaffold gap is present, inconsistency = -2932006 59485911 59486945 566167 567201 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 59489226 59489886 569930 570575 NC_000014.9 velvet.60753 97.7 True fake: scaffold gap size wrong estimation (extensive) 59497044 59499035 570602 572593 NC_000014.9 velvet.60753 99.85 True fake: scaffold gap size wrong estimation (local) 59499279 59502755 573609 577085 NC_000014.9 velvet.60753 99.88 True relocation, scaffold gap is present, inconsistency = 2923747 62435048 62446168 585631 596915 NC_000014.9 velvet.60753 99.56 True fake: scaffold gap size wrong estimation (local) 62448476 62451921 601815 605837 NC_000014.9 velvet.60753 99.56 True relocation, scaffold gap is present, inconsistency = -2948884 59503048 59506289 605848 609088 NC_000014.9 velvet.60753 99.81 True fake: scaffold gap size wrong estimation (local) 59506588 59507259 610295 610966 NC_000014.9 velvet.60753 99.85 True fake: scaffold gap size wrong estimation (local) 59531385 59533745 633558 635918 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 59533990 59535695 636842 638547 NC_000014.9 velvet.60753 99.94 True fake: scaffold gap size wrong estimation (local) 59535938 59536811 639398 640271 NC_000014.9 velvet.60753 98.86 True local misassembly 59537060 59537902 640272 641114 NC_000014.9 velvet.60753 98.46 True relocation, scaffold gap is present, inconsistency = -1753395 57784581 57786963 641188 643548 NC_000014.9 velvet.60753 98.9 True fake: scaffold gap size wrong estimation (local) 57792668 57793803 650450 651585 NC_000014.9 velvet.60753 99.91 True fake: scaffold gap size wrong estimation (local) 57794481 57795971 653161 654651 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 57798156 57800309 657465 659618 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 57801094 57801781 661380 662056 NC_000014.9 velvet.60753 97.97 True relocation, scaffold gap is present, inconsistency = 23139328 34660276 34661229 663546 662593 NC_000014.9 velvet.60753 100.0 True relocation, scaffold gap is present, inconsistency = 23134158 57796066 57798148 664225 666307 NC_000014.9 velvet.60753 100.0 True relocation, scaffold gap is present, inconsistency = 10788863 68587022 68595935 675291 666318 NC_000014.9 velvet.60753 99.29 True relocation, scaffold gap is present, inconsistency = 12525490 56056209 56061521 675302 680614 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 56061801 56064492 681665 684352 NC_000014.9 velvet.60753 99.85 True relocation, scaffold gap is present, inconsistency = 12518543 68583046 68585655 686962 684363 NC_000014.9 velvet.60753 99.5 True relocation, scaffold gap is present, inconsistency = 12524879 56054790 56056121 689008 690339 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 56074532 56077279 705555 708302 NC_000014.9 velvet.60753 100.0 True relocation, scaffold gap is present, inconsistency = -4482515 51594775 51599020 708313 713277 NC_000014.9 velvet.60753 96.87 True relocation, scaffold gap is present, inconsistency = 16950657 68549688 68554839 718439 713288 NC_000014.9 velvet.60753 99.98 True fake: scaffold gap size wrong estimation (local) 68540168 68549397 728758 719529 NC_000014.9 velvet.60753 99.9 True relocation, scaffold gap is present, inconsistency = -33933 68570901 68574090 731991 728769 NC_000014.9 velvet.60753 99.81 True relocation, scaffold gap is present, inconsistency = -7251 68577507 68578141 732636 732002 NC_000014.9 velvet.60753 99.84 True relocation, scaffold gap is present, inconsistency = 16976709 51591842 51594159 739275 741592 NC_000014.9 velvet.60753 99.74 True fake: scaffold gap size wrong estimation (local) 51605382 51622829 749231 767488 NC_000014.9 velvet.60753 99.94 True relocation, scaffold gap is present, inconsistency = 16915791 68538631 68540160 769028 767499 NC_000014.9 velvet.60753 99.87 True relocation, scaffold gap is present, inconsistency = 12421128 56107254 56109874 776657 779277 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 56110839 56111624 780672 781457 NC_000014.9 velvet.60753 99.87 True fake: scaffold gap size wrong estimation (local) 56112050 56118248 782625 788779 NC_000014.9 velvet.60753 99.29 True fake: scaffold gap size wrong estimation (local) 56121270 56122608 788796 790133 NC_000014.9 velvet.60753 99.33 True relocation, scaffold gap is present, inconsistency = 4480282 51639436 51640977 791685 790144 NC_000014.9 velvet.60753 99.94 True fake: scaffold gap size wrong estimation (local) 51637180 51638969 794587 792833 NC_000014.9 velvet.60753 95.34 True fake: scaffold gap size wrong estimation (local) 51633622 51636936 799182 795501 NC_000014.9 velvet.60753 99.97 True fake: scaffold gap size wrong estimation (local) 51631984 51633257 801507 800239 NC_000014.9 velvet.60753 99.37 True relocation, scaffold gap is present, inconsistency = 10118 51644432 51646064 802564 804141 NC_000014.9 velvet.60753 96.61 True fake: scaffold gap size wrong estimation (local) 51646348 51647866 804828 806346 NC_000014.9 velvet.60753 99.93 True fake: scaffold gap size wrong estimation (local) 51648143 51649801 807156 808814 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 51656692 51662353 810849 817318 NC_000014.9 velvet.60753 99.95 True fake: scaffold gap size wrong estimation (local) 51663724 51665917 819436 821629 NC_000014.9 velvet.60753 99.91 True fake: scaffold gap size wrong estimation (local) 51666025 51668399 822686 825060 NC_000014.9 velvet.60753 99.87 True relocation, scaffold gap is present, inconsistency = 1212625 52881035 52882944 825071 826986 NC_000014.9 velvet.60753 99.69 True fake: scaffold gap size wrong estimation (local) 52883178 52883941 827632 828395 NC_000014.9 velvet.60753 98.56 True relocation, scaffold gap is present, inconsistency = 15619490 68504665 68505538 830502 829629 NC_000014.9 velvet.60753 99.89 True relocation, scaffold gap is present, inconsistency = 16854241 51649812 51650413 830513 831114 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 51650693 51651728 831699 832734 NC_000014.9 velvet.60753 99.9 True fake: scaffold gap size wrong estimation (local) 51651873 51656429 833595 838730 NC_000014.9 velvet.60753 99.89 True relocation, scaffold gap is present, inconsistency = 1249205 52907237 52909553 840333 842649 NC_000014.9 velvet.60753 99.91 True relocation, scaffold gap is present, inconsistency = -39414 52885346 52886296 857856 858806 NC_000014.9 velvet.60753 100.0 True relocation, scaffold gap is present, inconsistency = 15607974 68494281 68504627 869134 858817 NC_000014.9 velvet.60753 99.61 True fake: scaffold gap size wrong estimation (local) 68484630 68487533 872059 869156 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 68482183 68484344 875294 873133 NC_000014.9 velvet.60753 99.95 True relocation, scaffold gap is present, inconsistency = -11820 68489123 68493992 880174 875305 NC_000014.9 velvet.60753 99.94 True fake: scaffold gap size wrong estimation (local) 68487711 68488960 882423 881174 NC_000014.9 velvet.60753 99.92 True fake: scaffold gap size wrong estimation (extensive) 68471694 68479658 891518 882632 NC_000014.9 velvet.60753 100.0 True relocation, scaffold gap is present, inconsistency = 40667550 27800527 27804133 891529 895129 NC_000014.9 velvet.60753 99.75 True relocation, scaffold gap is present, inconsistency = 23864575 51668966 51670071 895387 896492 NC_000014.9 velvet.60753 99.91 True relocation, scaffold gap is present, inconsistency = 10372674 62042756 62043424 896503 897171 NC_000014.9 velvet.60753 100.0 True relocation, scaffold gap is present, inconsistency = 2506324 64554422 64556117 903540 901845 NC_000014.9 velvet.60753 99.88 True fake: scaffold gap size wrong estimation (local) 64553218 64554139 905088 904167 NC_000014.9 velvet.60753 99.78 True fake: scaffold gap size wrong estimation (local) 64552479 64553121 906152 905511 NC_000014.9 velvet.60753 99.84 True fake: scaffold gap size wrong estimation (local) 64548319 64552194 910710 906833 NC_000014.9 velvet.60753 99.87 True relocation, scaffold gap is present, inconsistency = -3911859 68457957 68460167 912931 910721 NC_000014.9 velvet.60753 100.0 True local misassembly 68460444 68462589 915085 912942 NC_000014.9 velvet.60753 99.86 True relocation, scaffold gap is present, inconsistency = 11471 68442707 68446932 921346 917126 NC_000014.9 velvet.60753 99.79 True fake: scaffold gap size wrong estimation (local) 68441547 68442429 923271 922389 NC_000014.9 velvet.60753 99.77 True fake: scaffold gap size wrong estimation (local) 68440749 68441253 924243 923739 NC_000014.9 velvet.60753 100.0 True relocation, scaffold gap is present, inconsistency = 3868830 64571377 64571908 924785 924254 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 64567928 64569725 929001 927204 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 64566445 64567660 931040 929825 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 64563230 64565984 934960 932160 NC_000014.9 velvet.60753 99.78 True relocation, scaffold gap is present, inconsistency = 36736254 27825092 27826965 934971 937434 NC_000014.9 velvet.60753 99.28 True fake: scaffold gap size wrong estimation (local) 27826988 27827550 937931 938493 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 27827839 27831532 938626 943009 NC_000014.9 velvet.60753 99.86 True relocation, scaffold gap is present, inconsistency = -17943 27831572 27841308 960992 970727 NC_000014.9 velvet.60753 99.88 True fake: scaffold gap size wrong estimation (local) 27841480 27842852 971440 972801 NC_000014.9 velvet.60753 99.12 True fake: scaffold gap size wrong estimation (local) 27842948 27845234 973485 975771 NC_000014.9 velvet.60753 99.91 True fake: scaffold gap size wrong estimation (local) 27851260 27851764 977762 978289 NC_000014.9 velvet.60753 95.27 True relocation, scaffold gap is present, inconsistency = -8400 27846964 27850045 981889 984970 NC_000014.9 velvet.60753 99.77 True fake: scaffold gap size wrong estimation (local) 27872193 27877542 1002994 1008413 NC_000014.9 velvet.60753 99.87 True fake: scaffold gap size wrong estimation (local) 27877731 27878928 1009316 1010513 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 27879470 27880635 1011574 1012718 NC_000014.9 velvet.60753 98.18 True fake: scaffold gap size wrong estimation (local) 27881046 27887196 1013987 1020137 NC_000014.9 velvet.60753 99.93 True fake: scaffold gap size wrong estimation (local) 27887625 27888645 1021290 1022310 NC_000014.9 velvet.60753 100.0 True relocation, scaffold gap is present, inconsistency = -36911 27854606 27861089 1025182 1033186 NC_000014.9 velvet.60753 96.91 True fake: scaffold gap size wrong estimation (local) 27888757 27890877 1059658 1061778 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 27892256 27893624 1063442 1064826 NC_000014.9 velvet.60753 98.63 True fake: scaffold gap size wrong estimation (local) 27894259 27894790 1066280 1066811 NC_000014.9 velvet.60753 100.0 True fake: scaffold gap size wrong estimation (local) 27894815 27897105 1068488 1070775 NC_000014.9 velvet.60753 99.3 True fake: scaffold gap size wrong estimation (local) 27897277 27903432 1071735 1078606 NC_000014.9 velvet.60753 99.9 True indel: indel (> 5bp) 27903520 27906280 1078719 1081478 NC_000014.9 velvet.60753 99.93 True fake: scaffold gap size wrong estimation (local) 27906432 27908135 1082392 1084095 NC_000014.9 velvet.60753 99.88 True fake: scaffold gap size wrong estimation (local) 27909567 27913349 1086429 1090284 NC_000014.9 velvet.60753 99.92 True fake: scaffold gap size wrong estimation (local) 27913456 27919482 1090903 1097692 NC_000014.9 velvet.60753 99.85 True fake: scaffold gap size wrong estimation (local) 27921452 27928103 1100311 1107696 NC_000014.9 velvet.60753 99.85 True fake: scaffold gap size wrong estimation (local) 27928224 27934136 1108598 1115191 NC_000014.9 velvet.60753 99.86 True CONTIG velvet.60753 1115191 misassembled 56302399 56308197 315 6112 NC_000014.9 velvet.60756 99.88 True fake: scaffold gap size wrong estimation (local) 56312465 56313473 6123 7128 NC_000014.9 velvet.60756 99.41 True fake: scaffold gap size wrong estimation (local) 56313616 56317651 8052 12237 NC_000014.9 velvet.60756 99.7 True relocation, scaffold gap is present, inconsistency = -9258 56308404 56312357 12248 16209 NC_000014.9 velvet.60756 99.62 True fake: scaffold gap size wrong estimation (local) 56333012 56337576 36300 41493 NC_000014.9 velvet.60756 100.0 True relocation, scaffold gap is present, inconsistency = -8331 56329256 56331145 41504 43403 NC_000014.9 velvet.60756 99.26 True fake: scaffold gap size wrong estimation (local) 56331321 56332752 44519 45950 NC_000014.9 velvet.60756 99.93 True local misassembly 56327577 56329213 45961 47597 NC_000014.9 velvet.60756 99.88 True relocation, scaffold gap is present, inconsistency = 11153 56403090 56404211 110321 111441 NC_000014.9 velvet.60756 99.82 True relocation, scaffold gap is present, inconsistency = -37562 56372572 56373252 117364 118043 NC_000014.9 velvet.60756 99.85 True CONTIG velvet.60756 118043 misassembled 86921600 86923689 2091 1 NC_000014.9 velvet.60768 100.0 True fake: scaffold gap size wrong estimation (local) 86913965 86920628 10540 3806 NC_000014.9 velvet.60768 99.91 True fake: scaffold gap size wrong estimation (extensive) 86887460 86888038 29035 28457 NC_000014.9 velvet.60768 99.31 True fake: scaffold gap size wrong estimation (local) 86882157 86883760 36843 35240 NC_000014.9 velvet.60768 99.94 True fake: scaffold gap size wrong estimation (local) 86880098 86881404 39875 38569 NC_000014.9 velvet.60768 99.85 True fake: scaffold gap size wrong estimation (local) 86877678 86878342 42915 42251 NC_000014.9 velvet.60768 100.0 True relocation, scaffold gap is present, inconsistency = -27027 86903601 86904693 44019 42927 NC_000014.9 velvet.60768 99.91 True fake: scaffold gap size wrong estimation (local) 86889081 86903332 60124 45138 NC_000014.9 velvet.60768 99.43 True relocation, scaffold gap is present, inconsistency = 3270970 83606205 83614270 63965 72021 NC_000014.9 velvet.60768 98.73 True fake: scaffold gap size wrong estimation (local) 83614494 83619699 73044 78725 NC_000014.9 velvet.60768 99.75 True fake: scaffold gap size wrong estimation (local) 83619978 83624607 79637 84294 NC_000014.9 velvet.60768 99.57 True fake: scaffold gap size wrong estimation (local) 83645308 83649765 100826 106194 NC_000014.9 velvet.60768 99.93 True fake: scaffold gap size wrong estimation (local) 83650334 83651237 107219 108122 NC_000014.9 velvet.60768 99.89 True fake: scaffold gap size wrong estimation (local) 83651428 83654999 108798 112369 NC_000014.9 velvet.60768 99.92 True fake: scaffold gap size wrong estimation (local) 83655249 83666869 113395 125288 NC_000014.9 velvet.60768 99.3 True fake: scaffold gap size wrong estimation (local) 83668817 83676114 128017 135607 NC_000014.9 velvet.60768 98.16 True fake: scaffold gap size wrong estimation (local) 83676390 83678166 136551 138327 NC_000014.9 velvet.60768 99.94 True relocation, scaffold gap is present, inconsistency = 3196820 86875182 86877398 140739 138523 NC_000014.9 velvet.60768 100.0 True fake: scaffold gap size wrong estimation (local) 86860303 86865557 153026 147124 NC_000014.9 velvet.60768 99.87 True relocation, scaffold gap is present, inconsistency = -12132 86866668 86872424 159315 153037 NC_000014.9 velvet.60768 97.05 True fake: scaffold gap size wrong estimation (local) 86857175 86859485 162854 160544 NC_000014.9 velvet.60768 99.96 True fake: scaffold gap size wrong estimation (local) 86854711 86856800 166095 164007 NC_000014.9 velvet.60768 99.95 True fake: scaffold gap size wrong estimation (local) 86841759 86854611 179511 166426 NC_000014.9 velvet.60768 99.82 True fake: scaffold gap size wrong estimation (local) 86838390 86840797 183658 181259 NC_000014.9 velvet.60768 99.63 True fake: scaffold gap size wrong estimation (local) 86819803 86838263 203016 184585 NC_000014.9 velvet.60768 99.35 True fake: scaffold gap size wrong estimation (local) 86813699 86819584 209931 204030 NC_000014.9 velvet.60768 99.76 True relocation, scaffold gap is present, inconsistency = 156709 86994960 86996598 228598 230236 NC_000014.9 velvet.60768 100.0 True fake: scaffold gap size wrong estimation (local) 86996938 87012289 231463 247085 NC_000014.9 velvet.60768 99.96 True fake: scaffold gap size wrong estimation (local) 87012408 87016062 247898 251552 NC_000014.9 velvet.60768 99.97 True fake: scaffold gap size wrong estimation (local) 87016544 87018814 252861 255128 NC_000014.9 velvet.60768 99.87 True fake: scaffold gap size wrong estimation (local) 87019100 87020705 256312 257874 NC_000014.9 velvet.60768 96.74 True fake: scaffold gap size wrong estimation (local) 87021586 87026200 259538 264892 NC_000014.9 velvet.60768 99.93 True fake: scaffold gap size wrong estimation (local) 87026502 87028378 265676 267552 NC_000014.9 velvet.60768 100.0 True fake: scaffold gap size wrong estimation (local) 87028667 87031655 268571 272337 NC_000014.9 velvet.60768 99.93 True fake: scaffold gap size wrong estimation (local) 87056970 87058067 299116 300213 NC_000014.9 velvet.60768 100.0 True fake: scaffold gap size wrong estimation (local) 87058238 87063790 301145 306807 NC_000014.9 velvet.60768 97.85 True fake: scaffold gap size wrong estimation (local) 87064074 87065107 307067 308155 NC_000014.9 velvet.60768 100.0 True relocation, scaffold gap is present, inconsistency = 16981802 104046920 104049097 310341 308166 NC_000014.9 velvet.60768 99.91 True fake: scaffold gap size wrong estimation (local) 104045147 104045964 313009 312145 NC_000014.9 velvet.60768 100.0 True fake: scaffold gap size wrong estimation (local) 104043507 104044872 314549 313184 NC_000014.9 velvet.60768 99.93 True fake: scaffold gap size wrong estimation (local) 104039120 104043156 319758 315722 NC_000014.9 velvet.60768 99.93 True fake: scaffold gap size wrong estimation (local) 104034460 104038653 325571 320815 NC_000014.9 velvet.60768 99.85 True fake: scaffold gap size wrong estimation (local) 104032476 104034176 328241 326541 NC_000014.9 velvet.60768 99.82 True fake: scaffold gap size wrong estimation (local) 104030960 104032179 330186 328918 NC_000014.9 velvet.60768 99.83 True relocation, scaffold gap is present, inconsistency = 9298561 94730188 94732071 330514 332397 NC_000014.9 velvet.60768 100.0 True fake: scaffold gap size wrong estimation (local) 94732374 94732943 333329 333898 NC_000014.9 velvet.60768 100.0 True fake: scaffold gap size wrong estimation (local) 94733170 94734830 334250 335910 NC_000014.9 velvet.60768 100.0 True fake: scaffold gap size wrong estimation (local) 94735314 94737339 337248 339274 NC_000014.9 velvet.60768 99.8 True relocation, scaffold gap is present, inconsistency = -6332673 88411403 88412548 346011 347156 NC_000014.9 velvet.60768 99.65 True inversion, scaffold gap is present 88413926 88417285 351419 347167 NC_000014.9 velvet.60768 98.82 True relocation, scaffold gap is present, inconsistency = -15677297 104072523 104073275 370119 369367 NC_000014.9 velvet.60768 100.0 True relocation, scaffold gap is present, inconsistency = 17022490 87039988 87047938 372214 380970 NC_000014.9 velvet.60768 99.92 True fake: scaffold gap size wrong estimation (local) 87048253 87053798 382060 388333 NC_000014.9 velvet.60768 99.91 True fake: scaffold gap size wrong estimation (local) 87054280 87056710 389436 391867 NC_000014.9 velvet.60768 99.67 True fake: scaffold gap size wrong estimation (local) 87075113 87079890 404570 409347 NC_000014.9 velvet.60768 99.96 True relocation, scaffold gap is present, inconsistency = -66991388 20088513 20093125 409358 414586 NC_000014.9 velvet.60768 99.8 True fake: scaffold gap size wrong estimation (local) 20093250 20094497 415146 416393 NC_000014.9 velvet.60768 99.52 True fake: not a misassembly (possible transposable element) 87069443 87070305 417994 418856 NC_000014.9 velvet.60768 100.0 True fake: not a misassembly (possible transposable element) 20094834 20096221 419057 420444 NC_000014.9 velvet.60768 99.28 True fake: scaffold gap size wrong estimation (local) 20096404 20099085 421522 424203 NC_000014.9 velvet.60768 99.85 True relocation, scaffold gap is present, inconsistency = 11379613 31478722 31480852 424227 426357 NC_000014.9 velvet.60768 100.0 True relocation, scaffold gap is present, inconsistency = 55589684 87070547 87072280 426368 428101 NC_000014.9 velvet.60768 99.94 True fake: scaffold gap size wrong estimation (local) 87072538 87075096 429029 431579 NC_000014.9 velvet.60768 99.65 True fake: scaffold gap size wrong estimation (local) 87079895 87089572 431590 442000 NC_000014.9 velvet.60768 99.61 True fake: scaffold gap size wrong estimation (local) 87089873 87094130 443033 447421 NC_000014.9 velvet.60768 99.81 True fake: scaffold gap size wrong estimation (local) 87094311 87106177 448307 460173 NC_000014.9 velvet.60768 99.86 True fake: scaffold gap size wrong estimation (local) 87106452 87117481 461239 472920 NC_000014.9 velvet.60768 99.96 True fake: scaffold gap size wrong estimation (local) 87117608 87118442 473821 474630 NC_000014.9 velvet.60768 96.85 True relocation, scaffold gap is present, inconsistency = -56373480 30744973 30745793 474641 475461 NC_000014.9 velvet.60768 99.88 True relocation, scaffold gap is present, inconsistency = 35493414 66242993 66246028 482333 479247 NC_000014.9 velvet.60768 99.73 True fake: scaffold gap size wrong estimation (local) 66240765 66242700 485287 483352 NC_000014.9 velvet.60768 100.0 True relocation, scaffold gap is present, inconsistency = 20881838 87124549 87125064 485298 485813 NC_000014.9 velvet.60768 100.0 True relocation, scaffold gap is present, inconsistency = 15832729 71287576 71289995 490064 487638 NC_000014.9 velvet.60768 99.92 True fake: scaffold gap size wrong estimation (local) 71285998 71287455 492487 491030 NC_000014.9 velvet.60768 99.86 True relocation, scaffold gap is present, inconsistency = 28386387 99673853 99675122 492498 493767 NC_000014.9 velvet.60768 99.92 True fake: scaffold gap size wrong estimation (local) 99675274 99680576 494508 499810 NC_000014.9 velvet.60768 99.87 True fake: scaffold gap size wrong estimation (local) 99680951 99681763 501004 501816 NC_000014.9 velvet.60768 100.0 True relocation, scaffold gap is present, inconsistency = -76054447 23627736 23628265 502236 502765 NC_000014.9 velvet.60768 100.0 True fake: scaffold gap size wrong estimation (local) 23628626 23629159 502857 503390 NC_000014.9 velvet.60768 100.0 True fake: scaffold gap size wrong estimation (local) 23629719 23631216 505109 506606 NC_000014.9 velvet.60768 99.6 True fake: not a misassembly (possible transposable element) 87151711 87154868 507709 510866 NC_000014.9 velvet.60768 100.0 True fake: not a misassembly (possible transposable element) 23631248 23634083 511517 514352 NC_000014.9 velvet.60768 100.0 True relocation, scaffold gap is present, inconsistency = 66140573 89774677 89776469 516165 514373 NC_000014.9 velvet.60768 99.72 True relocation, scaffold gap is present, inconsistency = 2612717 87157454 87159321 518804 520671 NC_000014.9 velvet.60768 99.95 True fake: scaffold gap size wrong estimation (local) 87159935 87162215 522096 524376 NC_000014.9 velvet.60768 99.82 True fake: scaffold gap size wrong estimation (local) 87162522 87167214 525539 530217 NC_000014.9 velvet.60768 99.62 True fake: scaffold gap size wrong estimation (local) 87167510 87168661 531280 532431 NC_000014.9 velvet.60768 99.91 True fake: scaffold gap size wrong estimation (local) 87168807 87169801 532594 533581 NC_000014.9 velvet.60768 98.88 True fake: scaffold gap size wrong estimation (local) 87169897 87171899 533763 535702 NC_000014.9 velvet.60768 96.69 True fake: scaffold gap size wrong estimation (local) 87172183 87178991 536791 543600 NC_000014.9 velvet.60768 99.79 True fake: scaffold gap size wrong estimation (local) 87179211 87179790 543746 544325 NC_000014.9 velvet.60768 100.0 True fake: not a misassembly (possible transposable element) 35331466 35334757 544423 547714 NC_000014.9 velvet.60768 99.97 True fake: not a misassembly (possible transposable element) 87190078 87198528 547725 556915 NC_000014.9 velvet.60768 99.98 True CONTIG velvet.60768 556915 misassembled CONTIG velvet.60816 369 unaligned 85939992 85944637 5650 1 NC_000014.9 velvet.60823 99.56 True fake: scaffold gap size wrong estimation (local) 85937991 85939247 8582 7327 NC_000014.9 velvet.60823 99.68 True fake: scaffold gap size wrong estimation (local) 85935308 85936763 10003 8593 NC_000014.9 velvet.60823 96.47 True fake: scaffold gap size wrong estimation (local) 85934421 85935211 13920 13133 NC_000014.9 velvet.60823 99.62 True inversion, scaffold gap is present 85929779 85930513 14656 15396 NC_000014.9 velvet.60823 100.0 True fake: scaffold gap size wrong estimation (local) 85931269 85933225 17355 19321 NC_000014.9 velvet.60823 99.69 True relocation, scaffold gap is present, inconsistency = -33593 85906585 85907729 26274 27453 NC_000014.9 velvet.60823 98.63 True fake: scaffold gap size wrong estimation (local) 85908096 85912586 29230 33765 NC_000014.9 velvet.60823 99.75 True fake: scaffold gap size wrong estimation (local) 85912858 85914345 34760 36247 NC_000014.9 velvet.60823 100.0 True fake: scaffold gap size wrong estimation (local) 85914483 85916052 36774 38343 NC_000014.9 velvet.60823 99.94 True fake: scaffold gap size wrong estimation (local) 85916332 85920203 39240 43101 NC_000014.9 velvet.60823 99.61 True fake: scaffold gap size wrong estimation (local) 85920485 85927710 43966 51590 NC_000014.9 velvet.60823 99.86 True fake: not a misassembly (possible transposable element) 67127285 67128273 51601 52589 NC_000014.9 velvet.60823 100.0 True fake: not a misassembly (possible transposable element) 85927928 85929776 52600 54492 NC_000014.9 velvet.60823 99.89 True relocation, scaffold gap is present, inconsistency = 17331264 68574361 68577488 76795 73668 NC_000014.9 velvet.60823 99.87 True relocation, scaffold gap is present, inconsistency = 12487579 56077291 56079986 83591 86286 NC_000014.9 velvet.60823 100.0 True relocation, scaffold gap is present, inconsistency = 29809497 85891665 85902087 99741 88468 NC_000014.9 velvet.60823 99.35 True relocation, scaffold gap is present, inconsistency = 42489 85944660 85945989 99825 101195 NC_000014.9 velvet.60823 96.72 True fake: scaffold gap size wrong estimation (local) 85946967 85958649 102577 115662 NC_000014.9 velvet.60823 99.1 True fake: scaffold gap size wrong estimation (local) 85958922 85969083 116645 128364 NC_000014.9 velvet.60823 100.0 True fake: scaffold gap size wrong estimation (local) 85974408 85974999 134552 135183 NC_000014.9 velvet.60823 99.26 True fake: scaffold gap size wrong estimation (local) 85975176 85984992 135433 146894 NC_000014.9 velvet.60823 99.83 True fake: scaffold gap size wrong estimation (local) 85986154 85998546 148858 161318 NC_000014.9 velvet.60823 99.87 True relocation, scaffold gap is present, inconsistency = 44379287 41604628 41606851 163557 161334 NC_000014.9 velvet.60823 99.87 True fake: not a misassembly (possible transposable element) 64053884 64055392 164412 165920 NC_000014.9 velvet.60823 99.8 True fake: not a misassembly (possible transposable element) 41575266 41577264 191143 189145 NC_000014.9 velvet.60823 99.95 True relocation, scaffold gap is present, inconsistency = 12586088 28983837 28989167 191154 196544 NC_000014.9 velvet.60823 98.68 True relocation, scaffold gap is present, inconsistency = 57011416 86000837 86001593 196798 197554 NC_000014.9 velvet.60823 99.74 True fake: scaffold gap size wrong estimation (local) 86001939 86016178 198022 212839 NC_000014.9 velvet.60823 99.81 True fake: scaffold gap size wrong estimation (local) 86016262 86024657 213002 221397 NC_000014.9 velvet.60823 99.86 True fake: scaffold gap size wrong estimation (local) 86026074 86029164 223527 226617 NC_000014.9 velvet.60823 99.81 True fake: scaffold gap size wrong estimation (local) 86029457 86042398 227707 240647 NC_000014.9 velvet.60823 99.95 True fake: scaffold gap size wrong estimation (local) 86047140 86057961 243998 255163 NC_000014.9 velvet.60823 99.36 True fake: scaffold gap size wrong estimation (local) 86058138 86071423 256115 269873 NC_000014.9 velvet.60823 99.87 True fake: scaffold gap size wrong estimation (local) 86071715 86074524 270994 273796 NC_000014.9 velvet.60823 99.54 True fake: not a misassembly (possible transposable element) 29000858 29001866 275565 276573 NC_000014.9 velvet.60823 100.0 True fake: not a misassembly (possible transposable element) 86080515 86086225 278218 284790 NC_000014.9 velvet.60823 99.96 True fake: scaffold gap size wrong estimation (local) 86086461 86090749 285849 290670 NC_000014.9 velvet.60823 99.69 True fake: scaffold gap size wrong estimation (local) 86091041 86092678 291383 293037 NC_000014.9 velvet.60823 98.55 True fake: scaffold gap size wrong estimation (local) 86092960 86093688 293474 294202 NC_000014.9 velvet.60823 100.0 True fake: scaffold gap size wrong estimation (local) 86093986 86095802 295245 297013 NC_000014.9 velvet.60823 97.29 True relocation, scaffold gap is present, inconsistency = 49079585 37011124 37014390 300879 297024 NC_000014.9 velvet.60823 99.91 True fake: scaffold gap size wrong estimation (local) 37009467 37010649 302959 301777 NC_000014.9 velvet.60823 99.92 True fake: scaffold gap size wrong estimation (local) 37007601 37009210 305826 303366 NC_000014.9 velvet.60823 99.94 True fake: scaffold gap size wrong estimation (local) 37005942 37007314 307210 305838 NC_000014.9 velvet.60823 100.0 True fake: not a misassembly (possible transposable element) 36998761 37000862 307221 309322 NC_000014.9 velvet.60823 99.71 True fake: not a misassembly (possible transposable element) 37000875 37005917 315229 309333 NC_000014.9 velvet.60823 99.9 True relocation, scaffold gap is present, inconsistency = 7685 37014450 37015005 316077 316632 NC_000014.9 velvet.60823 100.0 True relocation, scaffold gap is present, inconsistency = 49093641 86111335 86114900 319321 322855 NC_000014.9 velvet.60823 99.04 True inversion, scaffold gap is present 86116044 86117173 324243 323114 NC_000014.9 velvet.60823 100.0 True relocation, scaffold gap is present, inconsistency = 49094639 37016540 37017212 328436 329108 NC_000014.9 velvet.60823 99.85 True relocation, scaffold gap is present, inconsistency = 49103597 86121768 86124917 330067 333215 NC_000014.9 velvet.60823 99.87 True fake: scaffold gap size wrong estimation (local) 86125118 86129841 334099 338746 NC_000014.9 velvet.60823 98.39 True fake: scaffold gap size wrong estimation (local) 86130557 86131726 339955 341124 NC_000014.9 velvet.60823 100.0 True fake: scaffold gap size wrong estimation (local) 86131752 86134810 341749 344807 NC_000014.9 velvet.60823 99.9 True fake: scaffold gap size wrong estimation (local) 86135100 86138406 345885 349170 NC_000014.9 velvet.60823 99.24 True fake: scaffold gap size wrong estimation (local) 86138621 86142688 350266 354333 NC_000014.9 velvet.60823 99.98 True relocation, scaffold gap is present, inconsistency = -25715083 60427616 60430145 354344 356878 NC_000014.9 velvet.60823 99.8 True relocation, scaffold gap is present, inconsistency = 22065373 38356289 38362232 363145 356889 NC_000014.9 velvet.60823 99.63 True relocation, scaffold gap is present, inconsistency = 1369038 36969634 36972997 380760 377399 NC_000014.9 velvet.60823 99.88 True fake: scaffold gap size wrong estimation (extensive) 36959612 36961218 383197 381591 NC_000014.9 velvet.60823 99.75 True CONTIG velvet.60823 383197 misassembled 71122941 71124235 1 1337 NC_000014.9 velvet.60839 100.0 True CONTIG velvet.60839 4440 correct 79865053 79865705 2899 3551 NC_000014.9 velvet.60854 100.0 True fake: scaffold gap size wrong estimation (local) 79865791 79870046 6742 10996 NC_000014.9 velvet.60854 99.86 True fake: scaffold gap size wrong estimation (local) 79870813 79875396 12618 17177 NC_000014.9 velvet.60854 99.19 True fake: scaffold gap size wrong estimation (local) 79875702 79876743 18023 19064 NC_000014.9 velvet.60854 99.81 True relocation, scaffold gap is present, inconsistency = 12192772 92072726 92073458 22275 23007 NC_000014.9 velvet.60854 100.0 True fake: scaffold gap size wrong estimation (local) 92074344 92075181 25587 26424 NC_000014.9 velvet.60854 99.88 True fake: scaffold gap size wrong estimation (local) 92079216 92079775 32544 33103 NC_000014.9 velvet.60854 100.0 True relocation, scaffold gap is present, inconsistency = -48896 92031399 92031952 33623 34176 NC_000014.9 velvet.60854 98.01 True fake: scaffold gap size wrong estimation (local) 92034456 92035059 37125 37724 NC_000014.9 velvet.60854 99.17 True fake: scaffold gap size wrong estimation (local) 92037014 92037621 40568 41175 NC_000014.9 velvet.60854 99.84 True relocation, scaffold gap is present, inconsistency = -26115 92011517 92013017 41186 42686 NC_000014.9 velvet.60854 99.93 True fake: scaffold gap size wrong estimation (local) 92013284 92014920 43647 45283 NC_000014.9 velvet.60854 100.0 True fake: scaffold gap size wrong estimation (local) 92015641 92017326 46696 48381 NC_000014.9 velvet.60854 100.0 True relocation, scaffold gap is present, inconsistency = -12197352 79844576 79848429 72983 76676 NC_000014.9 velvet.60854 95.2 True fake: scaffold gap size wrong estimation (local) 79848551 79857229 77563 86388 NC_000014.9 velvet.60854 99.92 True relocation, scaffold gap is present, inconsistency = 12175621 92032864 92034134 86402 87672 NC_000014.9 velvet.60854 100.0 True fake: scaffold gap size wrong estimation (local) 92037842 92040541 87683 90382 NC_000014.9 velvet.60854 99.56 True relocation, scaffold gap is present, inconsistency = -12183112 79857602 79858172 90555 91125 NC_000014.9 velvet.60854 100.0 True fake: scaffold gap size wrong estimation (local) 79858173 79858973 91168 91968 NC_000014.9 velvet.60854 99.63 True fake: not a misassembly (possible transposable element) 92040542 92041325 91995 92778 NC_000014.9 velvet.60854 98.72 True fake: not a misassembly (possible transposable element) 79858974 79863517 93050 97593 NC_000014.9 velvet.60854 99.93 True indel: indel (<= 5bp) 79863519 79864733 97594 98808 NC_000014.9 velvet.60854 99.84 True relocation, scaffold gap is present, inconsistency = -15790580 64077418 64078834 102073 103487 NC_000014.9 velvet.60854 99.72 True fake: scaffold gap size wrong estimation (local) 64079083 64079927 105324 106168 NC_000014.9 velvet.60854 100.0 True relocation, scaffold gap is present, inconsistency = 22168 64102293 64103338 107458 106366 NC_000014.9 velvet.60854 100.0 True fake: scaffold gap size wrong estimation (local) 64100619 64102162 110270 108726 NC_000014.9 velvet.60854 99.93 True relocation, scaffold gap is present, inconsistency = 8459 64110632 64111551 110281 111164 NC_000014.9 velvet.60854 96.04 True fake: not a misassembly (possible transposable element) 64116688 64117320 112127 111495 NC_000014.9 velvet.60854 100.0 True fake: not a misassembly (possible transposable element) 64111787 64115903 112687 116857 NC_000014.9 velvet.60854 99.83 True relocation, scaffold gap is present, inconsistency = -35216 64082117 64083954 118287 120113 NC_000014.9 velvet.60854 99.29 True relocation, scaffold gap is present, inconsistency = -8334 64075631 64077395 120124 121886 NC_000014.9 velvet.60854 99.77 True fake: scaffold gap size wrong estimation (local) 64084230 64086723 121897 124352 NC_000014.9 velvet.60854 98.31 True relocation, scaffold gap is present, inconsistency = -14753 64071981 64072515 124363 124897 NC_000014.9 velvet.60854 100.0 True fake: scaffold gap size wrong estimation (local) 64072972 64074711 125090 126829 NC_000014.9 velvet.60854 99.77 True relocation, scaffold gap is present, inconsistency = 59375 64150570 64154541 143313 147196 NC_000014.9 velvet.60854 97.73 True fake: scaffold gap size wrong estimation (local) 64154678 64156472 147937 149765 NC_000014.9 velvet.60854 99.94 True fake: scaffold gap size wrong estimation (local) 64156761 64161090 150730 155059 NC_000014.9 velvet.60854 100.0 True relocation, scaffold gap is present, inconsistency = 13385297 77572084 77573671 180756 182415 NC_000014.9 velvet.60854 95.91 True fake: scaffold gap size wrong estimation (local) 77575210 77577497 184565 186852 NC_000014.9 velvet.60854 99.96 True fake: scaffold gap size wrong estimation (local) 77578733 77580224 188955 190483 NC_000014.9 velvet.60854 99.59 True fake: scaffold gap size wrong estimation (local) 77582343 77582978 193453 194088 NC_000014.9 velvet.60854 99.84 True fake: scaffold gap size wrong estimation (local) 77583090 77586091 194996 197985 NC_000014.9 velvet.60854 99.47 True fake: scaffold gap size wrong estimation (local) 77586375 77586970 199117 199712 NC_000014.9 velvet.60854 99.83 True relocation, scaffold gap is present, inconsistency = 2308009 79894990 79897366 199723 202099 NC_000014.9 velvet.60854 99.87 True fake: scaffold gap size wrong estimation (local) 79898633 79901375 204247 206989 NC_000014.9 velvet.60854 100.0 True fake: scaffold gap size wrong estimation (local) 79901524 79902733 208079 209288 NC_000014.9 velvet.60854 100.0 True fake: scaffold gap size wrong estimation (local) 79925852 79929795 230121 234064 NC_000014.9 velvet.60854 100.0 True fake: scaffold gap size wrong estimation (local) 79937074 79944525 235472 243721 NC_000014.9 velvet.60854 99.95 True fake: scaffold gap size wrong estimation (local) 79944814 79953270 244735 253325 NC_000014.9 velvet.60854 99.87 True fake: scaffold gap size wrong estimation (local) 79959332 79960094 259895 260657 NC_000014.9 velvet.60854 99.21 True fake: scaffold gap size wrong estimation (local) 79960333 79965075 261673 266415 NC_000014.9 velvet.60854 99.85 True fake: scaffold gap size wrong estimation (local) 79965348 79967612 267526 269790 NC_000014.9 velvet.60854 99.65 True fake: scaffold gap size wrong estimation (extensive) 79974815 79977916 269801 272902 NC_000014.9 velvet.60854 99.68 True relocation, scaffold gap is present, inconsistency = -11145 79967932 79974800 274063 280932 NC_000014.9 velvet.60854 99.77 True fake: scaffold gap size wrong estimation (local) 79978345 79979441 280957 282020 NC_000014.9 velvet.60854 95.87 True fake: scaffold gap size wrong estimation (local) 79982224 79985970 282676 286337 NC_000014.9 velvet.60854 97.51 True local misassembly 79979863 79982196 286348 288673 NC_000014.9 velvet.60854 99.44 True fake: scaffold gap size wrong estimation (local) 79986030 79990643 288684 293501 NC_000014.9 velvet.60854 99.91 True fake: scaffold gap size wrong estimation (local) 79990818 79999059 294477 303517 NC_000014.9 velvet.60854 99.91 True fake: scaffold gap size wrong estimation (local) 79999333 80010489 304572 315928 NC_000014.9 velvet.60854 99.89 True fake: scaffold gap size wrong estimation (local) 80011636 80018449 317852 324696 NC_000014.9 velvet.60854 99.75 True fake: scaffold gap size wrong estimation (local) 80019247 80028463 326190 336959 NC_000014.9 velvet.60854 99.89 True fake: scaffold gap size wrong estimation (local) 80053324 80053932 359979 360587 NC_000014.9 velvet.60854 100.0 True fake: scaffold gap size wrong estimation (local) 80054043 80062375 360821 369105 NC_000014.9 velvet.60854 99.27 True relocation, scaffold gap is present, inconsistency = -31635 80033731 80034411 372096 372776 NC_000014.9 velvet.60854 100.0 True fake: scaffold gap size wrong estimation (local) 80034706 80038020 373507 376822 NC_000014.9 velvet.60854 99.94 True fake: scaffold gap size wrong estimation (local) 80044920 80046011 387134 388222 NC_000014.9 velvet.60854 99.73 True fake: scaffold gap size wrong estimation (local) 80046202 80053295 389190 397148 NC_000014.9 velvet.60854 99.06 True fake: scaffold gap size wrong estimation (extensive) 80062440 80063963 397380 398907 NC_000014.9 velvet.60854 99.67 True fake: scaffold gap size wrong estimation (local) 80064179 80069623 400067 406407 NC_000014.9 velvet.60854 99.04 True fake: scaffold gap size wrong estimation (local) 80069870 80082713 407601 422241 NC_000014.9 velvet.60854 99.89 True fake: scaffold gap size wrong estimation (local) 80082996 80088540 423356 428865 NC_000014.9 velvet.60854 99.31 True fake: scaffold gap size wrong estimation (local) 80100680 80102842 441477 443639 NC_000014.9 velvet.60854 99.82 True relocation, scaffold gap is present, inconsistency = -57244388 22861464 22862618 446649 447803 NC_000014.9 velvet.60854 100.0 True fake: scaffold gap size wrong estimation (local) 22864972 22867013 450946 452986 NC_000014.9 velvet.60854 99.51 True relocation, scaffold gap is present, inconsistency = 57225942 80094679 80095248 454710 455279 NC_000014.9 velvet.60854 99.82 True local misassembly 80095385 80096622 455280 456517 NC_000014.9 velvet.60854 99.19 True fake: scaffold gap size wrong estimation (local) 80097722 80100657 458381 461316 NC_000014.9 velvet.60854 99.93 True fake: scaffold gap size wrong estimation (local) 80102881 80113202 464046 475915 NC_000014.9 velvet.60854 99.84 True fake: scaffold gap size wrong estimation (local) 80128534 80147470 487296 507209 NC_000014.9 velvet.60854 99.93 True relocation, scaffold gap is present, inconsistency = -57264196 22883285 22888612 507220 512547 NC_000014.9 velvet.60854 99.94 True relocation, scaffold gap is present, inconsistency = 57230939 80120621 80122007 513617 515003 NC_000014.9 velvet.60854 99.78 True indel: indel (> 5bp) 80122047 80122736 515004 515693 NC_000014.9 velvet.60854 97.97 True fake: scaffold gap size wrong estimation (local) 80122737 80125208 516970 519441 NC_000014.9 velvet.60854 99.6 True fake: scaffold gap size wrong estimation (local) 80125354 80126152 519539 520337 NC_000014.9 velvet.60854 99.87 True fake: not a misassembly (possible transposable element) 22892298 22894474 520348 522513 NC_000014.9 velvet.60854 99.31 True fake: not a misassembly (possible transposable element) 80126324 80128415 522524 524615 NC_000014.9 velvet.60854 99.86 True relocation, scaffold gap is present, inconsistency = -57224802 22942300 22942897 563302 563899 NC_000014.9 velvet.60854 100.0 True fake: scaffold gap size wrong estimation (local) 22954071 22954748 569296 569973 NC_000014.9 velvet.60854 100.0 True relocation, scaffold gap is present, inconsistency = -7672 22947089 22948362 569986 571259 NC_000014.9 velvet.60854 99.37 True fake: scaffold gap size wrong estimation (local) 22952319 22953176 576896 577753 NC_000014.9 velvet.60854 99.88 True relocation, scaffold gap is present, inconsistency = -7281 22945906 22946799 577764 578657 NC_000014.9 velvet.60854 100.0 True fake: scaffold gap size wrong estimation (local) 22976181 22980780 608662 613261 NC_000014.9 velvet.60854 99.96 True fake: scaffold gap size wrong estimation (local) 22980987 22983753 614273 617039 NC_000014.9 velvet.60854 99.89 True fake: scaffold gap size wrong estimation (local) 22984325 22988149 618411 622235 NC_000014.9 velvet.60854 100.0 True fake: scaffold gap size wrong estimation (local) 22989272 22990486 624183 625397 NC_000014.9 velvet.60854 99.18 True fake: scaffold gap size wrong estimation (local) 22994766 22995425 630888 631547 NC_000014.9 velvet.60854 100.0 True fake: scaffold gap size wrong estimation (local) 22995712 23000464 632256 637113 NC_000014.9 velvet.60854 100.0 True fake: scaffold gap size wrong estimation (local) 23000744 23001502 637968 638726 NC_000014.9 velvet.60854 100.0 True relocation, scaffold gap is present, inconsistency = 15583264 38588770 38589967 642730 643927 NC_000014.9 velvet.60854 99.17 True fake: scaffold gap size wrong estimation (local) 38590809 38595496 645464 650196 NC_000014.9 velvet.60854 99.96 True fake: not a misassembly (possible transposable element) 38611480 38613434 650417 652371 NC_000014.9 velvet.60854 99.95 True fake: not a misassembly (possible transposable element) 38603194 38603845 652382 653033 NC_000014.9 velvet.60854 100.0 True fake: scaffold gap size wrong estimation (local) 38625096 38628539 681026 684427 NC_000014.9 velvet.60854 98.72 True inversion, scaffold gap is present 38623273 38624672 686030 684622 NC_000014.9 velvet.60854 100.0 True relocation, scaffold gap is present, inconsistency = 12080 38610249 38611182 686041 686983 NC_000014.9 velvet.60854 99.89 True fake: scaffold gap size wrong estimation (local) 38613455 38619393 689833 695771 NC_000014.9 velvet.60854 99.98 True fake: scaffold gap size wrong estimation (local) 38641911 38642617 719675 720381 NC_000014.9 velvet.60854 100.0 True fake: scaffold gap size wrong estimation (local) 38642623 38644532 723141 725162 NC_000014.9 velvet.60854 98.66 True fake: scaffold gap size wrong estimation (local) 38644877 38648599 726240 730157 NC_000014.9 velvet.60854 99.97 True fake: scaffold gap size wrong estimation (local) 38649191 38671778 731431 755214 NC_000014.9 velvet.60854 99.73 True fake: scaffold gap size wrong estimation (local) 38677298 38680500 759844 763490 NC_000014.9 velvet.60854 99.94 True relocation, scaffold gap is present, inconsistency = 27759296 66447456 66456008 779635 771150 NC_000014.9 velvet.60854 99.2 True fake: scaffold gap size wrong estimation (local) 66441372 66447166 786557 780640 NC_000014.9 velvet.60854 99.98 True relocation, scaffold gap is present, inconsistency = 7997 66456041 66456545 787435 787939 NC_000014.9 velvet.60854 100.0 True relocation, scaffold gap is present, inconsistency = -27759630 38696926 38698522 787950 789544 NC_000014.9 velvet.60854 99.87 True fake: scaffold gap size wrong estimation (local) 38702033 38702603 794895 795456 NC_000014.9 velvet.60854 98.4 True indel: indel (> 5bp) 38702666 38703376 795538 796248 NC_000014.9 velvet.60854 100.0 True relocation, scaffold gap is present, inconsistency = 277464 38980851 38981426 796834 796259 NC_000014.9 velvet.60854 99.31 True relocation, scaffold gap is present, inconsistency = 27488774 66470831 66471695 797465 798329 NC_000014.9 velvet.60854 100.0 True relocation, scaffold gap is present, inconsistency = 37027 66429608 66433793 802587 798340 NC_000014.9 velvet.60854 99.93 True fake: scaffold gap size wrong estimation (local) 66428031 66429441 804658 803248 NC_000014.9 velvet.60854 100.0 True relocation, scaffold gap is present, inconsistency = -13235 66435234 66441255 810690 804669 NC_000014.9 velvet.60854 100.0 True relocation, scaffold gap is present, inconsistency = 22376392 44048494 44058831 810701 821038 NC_000014.9 velvet.60854 99.92 True relocation, scaffold gap is present, inconsistency = 22412910 66471752 66473933 821049 823230 NC_000014.9 velvet.60854 100.0 True fake: not a misassembly (possible transposable element) 38969296 38972185 826130 823241 NC_000014.9 velvet.60854 100.0 True fake: not a misassembly (possible transposable element) 66475572 66484059 826141 834619 NC_000014.9 velvet.60854 99.88 True fake: scaffold gap size wrong estimation (local) 66484905 66492353 836304 843752 NC_000014.9 velvet.60854 100.0 True fake: scaffold gap size wrong estimation (local) 66492643 66494763 844824 846944 NC_000014.9 velvet.60854 100.0 True relocation, scaffold gap is present, inconsistency = -22429425 44065349 44075374 846955 856900 NC_000014.9 velvet.60854 99.1 True relocation, scaffold gap is present, inconsistency = -31811 44043574 44045895 856911 859261 NC_000014.9 velvet.60854 98.09 True fake: scaffold gap size wrong estimation (local) 44076125 44082395 885790 892060 NC_000014.9 velvet.60854 99.94 True fake: scaffold gap size wrong estimation (local) 44082619 44083289 892789 893459 NC_000014.9 velvet.60854 100.0 True relocation, scaffold gap is present, inconsistency = 41306381 85389681 85394536 898325 893470 NC_000014.9 velvet.60854 99.94 True local misassembly 85394825 85395333 898844 898336 NC_000014.9 velvet.60854 100.0 True relocation, scaffold gap is present, inconsistency = 41298988 44090208 44095033 899648 904534 NC_000014.9 velvet.60854 98.63 True fake: scaffold gap size wrong estimation (local) 44095134 44101754 905371 912743 NC_000014.9 velvet.60854 99.82 True relocation, scaffold gap is present, inconsistency = 22404886 66506927 66515995 922098 913030 NC_000014.9 velvet.60854 100.0 True fake: scaffold gap size wrong estimation (local) 66504900 66506701 924920 923119 NC_000014.9 velvet.60854 99.94 True fake: scaffold gap size wrong estimation (local) 66500638 66504318 929941 926070 NC_000014.9 velvet.60854 96.49 True relocation, scaffold gap is present, inconsistency = 22388797 44102445 44110641 931141 939349 NC_000014.9 velvet.60854 99.83 True fake: scaffold gap size wrong estimation (local) 44111035 44115962 940616 945427 NC_000014.9 velvet.60854 97.52 True fake: scaffold gap size wrong estimation (local) 44116044 44119105 946062 949123 NC_000014.9 velvet.60854 99.77 True CONTIG velvet.60854 949123 misassembled 31263375 31264821 1456 10 NC_000014.9 velvet.60863 99.86 True fake: scaffold gap size wrong estimation (local) 31261272 31263096 4135 2314 NC_000014.9 velvet.60863 99.73 True fake: scaffold gap size wrong estimation (local) 31244391 31245058 20657 19990 NC_000014.9 velvet.60863 98.35 True fake: scaffold gap size wrong estimation (local) 31240833 31242379 24795 23249 NC_000014.9 velvet.60863 99.94 True fake: scaffold gap size wrong estimation (local) 31239304 31240568 26574 25310 NC_000014.9 velvet.60863 99.84 True fake: scaffold gap size wrong estimation (local) 31237507 31238320 28831 28018 NC_000014.9 velvet.60863 98.53 True fake: scaffold gap size wrong estimation (local) 31235251 31235918 32444 31730 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 31233019 31234237 35591 34373 NC_000014.9 velvet.60863 99.75 True fake: scaffold gap size wrong estimation (local) 31231874 31232493 37139 36520 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 31228291 31229286 38884 37889 NC_000014.9 velvet.60863 99.9 True local misassembly 31230540 31231064 39419 38895 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 31229304 31230318 40985 39971 NC_000014.9 velvet.60863 99.9 True fake: scaffold gap size wrong estimation (local) 31223034 31224193 48392 47233 NC_000014.9 velvet.60863 99.74 True fake: scaffold gap size wrong estimation (local) 31221333 31221868 51211 50676 NC_000014.9 velvet.60863 97.76 True fake: scaffold gap size wrong estimation (local) 31214969 31215953 59210 58265 NC_000014.9 velvet.60863 95.9 True fake: scaffold gap size wrong estimation (extensive) 31193905 31195679 71396 69624 NC_000014.9 velvet.60863 99.61 True fake: scaffold gap size wrong estimation (local) 31192926 31193641 72415 71700 NC_000014.9 velvet.60863 100.0 True fake: not a misassembly (possible transposable element) 31196868 31198935 74424 76518 NC_000014.9 velvet.60863 99.9 True fake: not a misassembly (possible transposable element) 31188451 31189505 78504 77450 NC_000014.9 velvet.60863 99.91 True fake: scaffold gap size wrong estimation (local) 31185727 31186403 81856 81180 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 31183079 31183695 85343 84727 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 31180706 31181575 88720 87851 NC_000014.9 velvet.60863 98.62 True fake: scaffold gap size wrong estimation (local) 31166116 31168761 103899 100915 NC_000014.9 velvet.60863 99.73 True relocation, scaffold gap is present, inconsistency = -79631 31211749 31212310 137897 137336 NC_000014.9 velvet.60863 99.47 True fake: scaffold gap size wrong estimation (local) 31210301 31211455 140577 139431 NC_000014.9 velvet.60863 99.3 True fake: scaffold gap size wrong estimation (local) 31204410 31209659 146503 141181 NC_000014.9 velvet.60863 99.94 True fake: scaffold gap size wrong estimation (local) 31202200 31202805 149334 148729 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 31200746 31201506 151753 150993 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 31199715 31200359 152497 151853 NC_000014.9 velvet.60863 100.0 True relocation, scaffold gap is present, inconsistency = 11719 31187317 31187836 152657 153176 NC_000014.9 velvet.60863 98.08 True fake: scaffold gap size wrong estimation (local) 31189665 31190717 155873 156925 NC_000014.9 velvet.60863 99.91 True inversion, scaffold gap is present 31184537 31185054 160936 160422 NC_000014.9 velvet.60863 99.42 True fake: scaffold gap size wrong estimation (local) 31177891 31178501 168986 168376 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 31175875 31176596 173516 172795 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 31174499 31175478 174619 173649 NC_000014.9 velvet.60863 99.08 True fake: scaffold gap size wrong estimation (local) 31171393 31174265 178593 175721 NC_000014.9 velvet.60863 99.97 True fake: scaffold gap size wrong estimation (local) 31170328 31171129 180099 179298 NC_000014.9 velvet.60863 98.75 True fake: scaffold gap size wrong estimation (local) 31163903 31165905 182887 180895 NC_000014.9 velvet.60863 99.25 True local misassembly 31169045 31169619 184632 184058 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 31162232 31162976 186659 185915 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 31159908 31160783 190005 189130 NC_000014.9 velvet.60863 99.89 True local misassembly 31160926 31161534 190624 190016 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 31156775 31157707 197617 196685 NC_000014.9 velvet.60863 98.5 True fake: scaffold gap size wrong estimation (local) 31154572 31155836 200743 199442 NC_000014.9 velvet.60863 99.92 True fake: scaffold gap size wrong estimation (local) 31153468 31154112 201941 201297 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 31151659 31152783 204238 203115 NC_000014.9 velvet.60863 99.73 True fake: scaffold gap size wrong estimation (local) 31149887 31151095 206183 204975 NC_000014.9 velvet.60863 99.92 True fake: scaffold gap size wrong estimation (local) 31147684 31149431 209400 207663 NC_000014.9 velvet.60863 99.42 True fake: scaffold gap size wrong estimation (local) 31141509 31142428 216756 215837 NC_000014.9 velvet.60863 99.89 True fake: scaffold gap size wrong estimation (local) 31139041 31140913 219975 218103 NC_000014.9 velvet.60863 99.52 True fake: not a misassembly (possible transposable element) 30701536 30703871 219979 222314 NC_000014.9 velvet.60863 100.0 True fake: not a misassembly (possible transposable element) 31137901 31139023 223447 222325 NC_000014.9 velvet.60863 99.11 True fake: scaffold gap size wrong estimation (local) 31136027 31136830 225876 225073 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (extensive) 31115733 31116628 236577 235682 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 31112877 31115488 240283 237642 NC_000014.9 velvet.60863 98.75 True fake: scaffold gap size wrong estimation (local) 31112084 31112615 241700 241169 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 31110274 31111252 243660 242719 NC_000014.9 velvet.60863 96.15 True fake: scaffold gap size wrong estimation (local) 31101781 31102423 245753 245111 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 31098883 31101509 249151 246525 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 31097889 31098698 250922 250113 NC_000014.9 velvet.60863 100.0 True relocation, scaffold gap is present, inconsistency = -13588 31108663 31109988 253736 252411 NC_000014.9 velvet.60863 99.85 True fake: scaffold gap size wrong estimation (local) 31105281 31108087 257980 255174 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 31103889 31104853 260187 259185 NC_000014.9 velvet.60863 100.0 True relocation, scaffold gap is present, inconsistency = 9864369 21233068 21237897 261810 266639 NC_000014.9 velvet.60863 99.98 True relocation, scaffold gap is present, inconsistency = 25961515 47217251 47219336 284478 286563 NC_000014.9 velvet.60863 100.0 True relocation, scaffold gap is present, inconsistency = -25976293 21243054 21244042 286574 287562 NC_000014.9 velvet.60863 99.8 True local misassembly 21244235 21244925 287563 288253 NC_000014.9 velvet.60863 98.55 True relocation, scaffold gap is present, inconsistency = 25975283 47221708 47222968 289753 291013 NC_000014.9 velvet.60863 99.92 True fake: scaffold gap size wrong estimation (local) 47223072 47225118 291281 293362 NC_000014.9 velvet.60863 97.65 True relocation, scaffold gap is present, inconsistency = 16087383 31132440 31134025 296611 295026 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 31127626 31132156 302535 297315 NC_000014.9 velvet.60863 98.77 True fake: scaffold gap size wrong estimation (local) 31125246 31126867 305787 304166 NC_000014.9 velvet.60863 99.88 True relocation, scaffold gap is present, inconsistency = 9899707 21223687 21225178 306148 307639 NC_000014.9 velvet.60863 99.33 True fake: not a misassembly (possible transposable element) 21225442 21226033 308441 307850 NC_000014.9 velvet.60863 100.0 True fake: not a misassembly (possible transposable element) 21229393 21231250 310331 312188 NC_000014.9 velvet.60863 99.89 True local misassembly 21226908 21228433 312199 313724 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 21231257 21232590 314861 316227 NC_000014.9 velvet.60863 99.92 True relocation, scaffold gap is present, inconsistency = 37365169 58597770 58603021 316238 321489 NC_000014.9 velvet.60863 99.92 True relocation, scaffold gap is present, inconsistency = 55352 58658518 58660501 323617 321634 NC_000014.9 velvet.60863 99.95 True relocation, scaffold gap is present, inconsistency = 37493788 21161567 21164349 326780 323998 NC_000014.9 velvet.60863 99.75 True relocation, scaffold gap is present, inconsistency = 26046547 47210937 47214051 326821 329935 NC_000014.9 velvet.60863 99.97 True fake: scaffold gap size wrong estimation (local) 47214148 47217219 330827 333898 NC_000014.9 velvet.60863 99.9 True relocation, scaffold gap is present, inconsistency = 34140811 81358041 81365518 333909 342090 NC_000014.9 velvet.60863 99.83 True fake: scaffold gap size wrong estimation (local) 81365760 81366502 342743 343485 NC_000014.9 velvet.60863 100.0 True relocation, scaffold gap is present, inconsistency = 22715496 58644436 58649065 350090 344684 NC_000014.9 velvet.60863 100.0 True relocation, scaffold gap is present, inconsistency = -10268217 68910834 68912576 351933 350167 NC_000014.9 velvet.60863 98.31 True fake: scaffold gap size wrong estimation (extensive) 68897246 68901173 355832 351944 NC_000014.9 velvet.60863 98.98 True relocation, scaffold gap is present, inconsistency = 47763952 21132572 21133080 356554 356046 NC_000014.9 velvet.60863 98.04 True fake: not a misassembly (possible transposable element) 21158624 21161252 362435 359807 NC_000014.9 velvet.60863 99.73 True fake: not a misassembly (possible transposable element) 21128084 21129704 364066 362446 NC_000014.9 velvet.60863 99.88 True fake: scaffold gap size wrong estimation (local) 21120503 21121527 365961 364937 NC_000014.9 velvet.60863 100.0 True relocation, scaffold gap is present, inconsistency = -7020 21125808 21127376 367676 366108 NC_000014.9 velvet.60863 99.3 True local misassembly 21123048 21124340 368969 367677 NC_000014.9 velvet.60863 99.69 True relocation, scaffold gap is present, inconsistency = 60247358 81371709 81372290 368980 369561 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 81372459 81374209 369582 371470 NC_000014.9 velvet.60863 99.42 True fake: scaffold gap size wrong estimation (local) 81374322 81377894 372468 376040 NC_000014.9 velvet.60863 99.92 True fake: scaffold gap size wrong estimation (local) 81378507 81379989 377300 378782 NC_000014.9 velvet.60863 99.26 True fake: scaffold gap size wrong estimation (local) 81382248 81384390 381956 384098 NC_000014.9 velvet.60863 99.95 True fake: scaffold gap size wrong estimation (local) 81384515 81385781 385036 386302 NC_000014.9 velvet.60863 99.92 True fake: scaffold gap size wrong estimation (local) 81388250 81389957 391843 393550 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 81390214 81393933 394697 398416 NC_000014.9 velvet.60863 99.89 True relocation, scaffold gap is present, inconsistency = 11630 81405896 81409225 398749 402078 NC_000014.9 velvet.60863 99.91 True fake: scaffold gap size wrong estimation (local) 81409433 81411454 402983 405050 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 81411676 81413452 405802 407578 NC_000014.9 velvet.60863 99.32 True relocation, scaffold gap is present, inconsistency = -32862796 48550667 48552118 407589 409040 NC_000014.9 velvet.60863 99.86 True inversion, scaffold gap is present 48552099 48552653 409605 409051 NC_000014.9 velvet.60863 99.82 True relocation, scaffold gap is present, inconsistency = 32862132 81415700 81418134 410520 412954 NC_000014.9 velvet.60863 99.88 True fake: scaffold gap size wrong estimation (local) 81423050 81424194 424778 425922 NC_000014.9 velvet.60863 99.74 True relocation, scaffold gap is present, inconsistency = 18234843 63184558 63188196 429571 425933 NC_000014.9 velvet.60863 99.97 True relocation, scaffold gap is present, inconsistency = 34652091 28529969 28531190 432069 430848 NC_000014.9 velvet.60863 99.92 True relocation, scaffold gap is present, inconsistency = 39793812 68326341 68327378 433408 434445 NC_000014.9 velvet.60863 99.81 True fake: scaffold gap size wrong estimation (local) 68327471 68329069 434727 436324 NC_000014.9 velvet.60863 99.81 True relocation, scaffold gap is present, inconsistency = -19798177 48531826 48533119 437258 438551 NC_000014.9 velvet.60863 99.77 True fake: scaffold gap size wrong estimation (local) 48533366 48541749 439401 447783 NC_000014.9 velvet.60863 99.92 True fake: scaffold gap size wrong estimation (local) 48542012 48543187 448835 450010 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 48545061 48546688 452615 454243 NC_000014.9 velvet.60863 99.82 True fake: scaffold gap size wrong estimation (local) 48546967 48548700 455582 457315 NC_000014.9 velvet.60863 99.94 True relocation, scaffold gap is present, inconsistency = 14584572 63149148 63153672 478498 473191 NC_000014.9 velvet.60863 99.89 True fake: not a misassembly (possible transposable element) 28496633 28498482 480488 478639 NC_000014.9 velvet.60863 99.95 True fake: not a misassembly (possible transposable element) 63148334 63149128 481293 480499 NC_000014.9 velvet.60863 99.75 True fake: scaffold gap size wrong estimation (local) 63144965 63147407 485453 483025 NC_000014.9 velvet.60863 98.64 True relocation, scaffold gap is present, inconsistency = 34622960 28518822 28519428 488636 488030 NC_000014.9 velvet.60863 98.19 True local misassembly 28517934 28518601 489304 488637 NC_000014.9 velvet.60863 99.85 True fake: not a misassembly (possible transposable element) 28553849 28555567 491311 489593 NC_000014.9 velvet.60863 99.42 True fake: not a misassembly (possible transposable element) 28515734 28517635 493265 491367 NC_000014.9 velvet.60863 99.74 True relocation, inconsistency = -38117 28552172 28553848 494944 493268 NC_000014.9 velvet.60863 99.52 True fake: scaffold gap size wrong estimation (local) 28549291 28552065 498551 495777 NC_000014.9 velvet.60863 99.93 True relocation, scaffold gap is present, inconsistency = 40471 28500438 28505749 507030 501622 NC_000014.9 velvet.60863 98.02 True fake: scaffold gap size wrong estimation (local) 28487196 28496051 523559 514052 NC_000014.9 velvet.60863 98.72 True fake: scaffold gap size wrong estimation (local) 28484958 28487087 526603 524474 NC_000014.9 velvet.60863 99.95 True fake: scaffold gap size wrong estimation (local) 28481600 28484013 530762 528349 NC_000014.9 velvet.60863 99.96 True fake: scaffold gap size wrong estimation (local) 28478498 28481318 534681 531861 NC_000014.9 velvet.60863 98.72 True fake: scaffold gap size wrong estimation (local) 28476493 28477088 537368 536773 NC_000014.9 velvet.60863 97.99 True local misassembly 28475669 28476314 538014 537369 NC_000014.9 velvet.60863 99.69 True fake: scaffold gap size wrong estimation (local) 28474473 28475622 540294 539145 NC_000014.9 velvet.60863 99.83 True fake: scaffold gap size wrong estimation (extensive) 28459710 28463474 548089 543797 NC_000014.9 velvet.60863 99.6 True relocation, scaffold gap is present, inconsistency = -15598 28471170 28472975 552753 550422 NC_000014.9 velvet.60863 96.83 True fake: scaffold gap size wrong estimation (local) 28463789 28471049 560215 552950 NC_000014.9 velvet.60863 99.86 True fake: scaffold gap size wrong estimation (local) 28456619 28459678 563956 560897 NC_000014.9 velvet.60863 99.18 True fake: scaffold gap size wrong estimation (local) 28454005 28456618 566882 564269 NC_000014.9 velvet.60863 99.81 True indel: indel (> 5bp) 28444463 28454004 576480 566939 NC_000014.9 velvet.60863 99.83 True fake: scaffold gap size wrong estimation (local) 28443956 28444462 580141 579635 NC_000014.9 velvet.60863 95.86 True indel: indel (<= 5bp) 28440897 28443952 583197 580142 NC_000014.9 velvet.60863 98.53 True fake: scaffold gap size wrong estimation (local) 28439837 28440896 585084 584025 NC_000014.9 velvet.60863 99.91 True fake: scaffold gap size wrong estimation (local) 28435542 28437044 590178 588676 NC_000014.9 velvet.60863 99.87 True fake: scaffold gap size wrong estimation (local) 28432651 28434679 593748 591720 NC_000014.9 velvet.60863 99.85 True fake: scaffold gap size wrong estimation (local) 28430340 28432143 596814 594894 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 28428196 28430232 599475 597439 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 28421061 28427973 608280 600581 NC_000014.9 velvet.60863 99.93 True fake: scaffold gap size wrong estimation (local) 28415694 28420777 614328 609236 NC_000014.9 velvet.60863 99.82 True fake: scaffold gap size wrong estimation (local) 28409860 28412884 620510 617479 NC_000014.9 velvet.60863 99.9 True fake: scaffold gap size wrong estimation (local) 28409341 28409853 622045 621533 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 28392228 28400629 642742 633522 NC_000014.9 velvet.60863 99.95 True fake: scaffold gap size wrong estimation (local) 28388667 28391624 647078 644121 NC_000014.9 velvet.60863 99.9 True fake: scaffold gap size wrong estimation (local) 28387528 28388189 649034 648373 NC_000014.9 velvet.60863 99.7 True fake: scaffold gap size wrong estimation (local) 28386475 28387193 650218 649500 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 28376139 28381869 656695 650229 NC_000014.9 velvet.60863 98.82 True fake: scaffold gap size wrong estimation (local) 28349626 28353818 681692 677344 NC_000014.9 velvet.60863 99.93 True fake: scaffold gap size wrong estimation (local) 28337369 28349135 695606 682926 NC_000014.9 velvet.60863 99.91 True fake: scaffold gap size wrong estimation (local) 28336530 28337314 697212 696461 NC_000014.9 velvet.60863 95.74 True fake: scaffold gap size wrong estimation (local) 28319077 28324706 712130 705641 NC_000014.9 velvet.60863 99.82 True relocation, scaffold gap is present, inconsistency = 46283367 74608748 74612743 712805 716800 NC_000014.9 velvet.60863 100.0 True relocation, scaffold gap is present, inconsistency = 46286946 28309634 28312470 728968 726132 NC_000014.9 velvet.60863 99.96 True relocation, scaffold gap is present, inconsistency = -30103696 58410317 58411169 731981 731129 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 58408418 58409566 734407 733259 NC_000014.9 velvet.60863 100.0 True relocation, scaffold gap is present, inconsistency = 16219988 74641562 74644006 746415 748859 NC_000014.9 velvet.60863 99.84 True relocation, scaffold gap is present, inconsistency = 5734694 68905984 68906857 749743 748870 NC_000014.9 velvet.60863 99.89 True relocation, scaffold gap is present, inconsistency = -9768 68914544 68915741 750951 749754 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (extensive) 68903519 68905718 753161 750962 NC_000014.9 velvet.60863 100.0 True relocation, scaffold gap is present, inconsistency = 10528768 58370785 58374278 753634 757128 NC_000014.9 velvet.60863 99.83 True relocation, scaffold gap is present, inconsistency = 30092951 28275241 28277823 759721 757139 NC_000014.9 velvet.60863 99.96 True local misassembly 28278109 28281337 762960 759732 NC_000014.9 velvet.60863 99.97 True relocation, scaffold gap is present, inconsistency = -30093313 58369616 58370296 764766 764086 NC_000014.9 velvet.60863 100.0 True relocation, scaffold gap is present, inconsistency = -59628 58425335 58425900 768709 768110 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 58423517 58424669 770456 769304 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 58420836 58421999 774468 773305 NC_000014.9 velvet.60863 99.14 True local misassembly 58419874 58420451 775046 774469 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 58417499 58419171 778474 776802 NC_000014.9 velvet.60863 99.76 True relocation, scaffold gap is present, inconsistency = 13926 58401601 58402349 779698 780446 NC_000014.9 velvet.60863 99.87 True local misassembly 58402580 58403115 780447 780982 NC_000014.9 velvet.60863 97.76 True fake: scaffold gap size wrong estimation (local) 58405805 58408162 784875 787232 NC_000014.9 velvet.60863 100.0 True fake: not a misassembly (possible transposable element) 28239995 28244005 791965 787243 NC_000014.9 velvet.60863 99.87 True fake: not a misassembly (possible transposable element) 58439490 58440047 813665 814222 NC_000014.9 velvet.60863 99.82 True fake: scaffold gap size wrong estimation (local) 58440635 58441210 814317 814891 NC_000014.9 velvet.60863 99.83 True fake: not a misassembly (possible transposable element) 68330005 68331104 815734 816833 NC_000014.9 velvet.60863 99.73 True fake: not a misassembly (possible transposable element) 58442374 58443465 817161 818252 NC_000014.9 velvet.60863 99.91 True local misassembly 58443706 58444585 818253 819132 NC_000014.9 velvet.60863 98.75 True relocation, scaffold gap is present, inconsistency = 5113893 63573092 63573967 834621 833746 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 63571106 63572117 837810 836799 NC_000014.9 velvet.60863 99.01 True fake: scaffold gap size wrong estimation (local) 63567539 63568368 841899 841070 NC_000014.9 velvet.60863 100.0 True relocation, scaffold gap is present, inconsistency = 4787934 68357013 68357574 842610 843171 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 68361976 68362577 843626 844227 NC_000014.9 velvet.60863 100.0 True fake: scaffold gap size wrong estimation (local) 68362859 68370790 844940 852871 NC_000014.9 velvet.60863 99.91 True CONTIG velvet.60863 854836 misassembled 28542534 28543394 861 1 NC_000014.9 velvet.60867 99.77 True fake: scaffold gap size wrong estimation (local) 28541403 28542502 2807 1709 NC_000014.9 velvet.60867 99.55 True fake: scaffold gap size wrong estimation (local) 28512117 28515699 34895 31313 NC_000014.9 velvet.60867 99.94 True CONTIG velvet.60867 42067 correct 72894112 72896107 2091 96 NC_000014.9 velvet.60870 99.7 True indel: indel (<= 5bp) 72893578 72894111 2629 2096 NC_000014.9 velvet.60870 97.94 True local misassembly 72887692 72890218 5156 2630 NC_000014.9 velvet.60870 99.88 True fake: scaffold gap size wrong estimation (local) 72886348 72887139 6589 5798 NC_000014.9 velvet.60870 99.75 True fake: scaffold gap size wrong estimation (local) 72883940 72884810 9773 8903 NC_000014.9 velvet.60870 98.62 True fake: scaffold gap size wrong estimation (local) 72879393 72883233 15641 11302 NC_000014.9 velvet.60870 99.76 True relocation, scaffold gap is present, inconsistency = 23797398 96680655 96688077 15665 23087 NC_000014.9 velvet.60870 99.89 True fake: scaffold gap size wrong estimation (local) 96688451 96700295 24264 36176 NC_000014.9 velvet.60870 99.32 True fake: scaffold gap size wrong estimation (local) 96700868 96703497 37548 40215 NC_000014.9 velvet.60870 97.94 True relocation, scaffold gap is present, inconsistency = 23835081 72864684 72865776 41318 40226 NC_000014.9 velvet.60870 99.82 True indel: indel (> 5bp) 72863153 72864671 42837 41319 NC_000014.9 velvet.60870 99.28 True fake: scaffold gap size wrong estimation (local) 72858311 72859484 44729 43556 NC_000014.9 velvet.60870 97.1 True fake: scaffold gap size wrong estimation (local) 72854286 72857573 49570 46283 NC_000014.9 velvet.60870 99.91 True fake: scaffold gap size wrong estimation (local) 72843004 72843564 56413 55853 NC_000014.9 velvet.60870 99.29 True fake: scaffold gap size wrong estimation (local) 72835323 72836914 58355 56764 NC_000014.9 velvet.60870 99.87 True fake: scaffold gap size wrong estimation (local) 72830017 72831932 65418 63504 NC_000014.9 velvet.60870 99.79 True fake: scaffold gap size wrong estimation (local) 72828538 72829390 67876 67024 NC_000014.9 velvet.60870 99.88 True fake: scaffold gap size wrong estimation (local) 72827852 72828414 68458 67896 NC_000014.9 velvet.60870 99.29 True relocation, scaffold gap is present, inconsistency = 23885854 96714789 96715761 68979 69999 NC_000014.9 velvet.60870 99.78 True fake: scaffold gap size wrong estimation (local) 96715884 96716738 70971 71825 NC_000014.9 velvet.60870 100.0 True local misassembly 96712929 96714561 72068 73700 NC_000014.9 velvet.60870 99.88 True fake: scaffold gap size wrong estimation (local) 96717836 96718911 73711 74790 NC_000014.9 velvet.60870 99.44 True fake: scaffold gap size wrong estimation (local) 96719638 96720861 75796 77013 NC_000014.9 velvet.60870 99.34 True relocation, scaffold gap is present, inconsistency = 23876868 72842091 72842759 77692 77024 NC_000014.9 velvet.60870 99.55 True fake: scaffold gap size wrong estimation (local) 72839191 72841804 81583 78967 NC_000014.9 velvet.60870 99.85 True relocation, scaffold gap is present, inconsistency = 23884418 96726233 96727818 81594 83175 NC_000014.9 velvet.60870 99.68 True fake: scaffold gap size wrong estimation (local) 96728009 96740383 83772 97318 NC_000014.9 velvet.60870 99.29 True relocation, scaffold gap is present, inconsistency = 23874538 72850118 72853460 101301 97329 NC_000014.9 velvet.60870 99.58 True fake: scaffold gap size wrong estimation (local) 72848417 72849831 103419 102005 NC_000014.9 velvet.60870 99.22 True fake: scaffold gap size wrong estimation (local) 72846678 72847528 105622 104772 NC_000014.9 velvet.60870 99.88 True fake: scaffold gap size wrong estimation (local) 72843815 72846077 109131 106373 NC_000014.9 velvet.60870 99.91 True relocation, scaffold gap is present, inconsistency = 23875105 96721193 96725961 109142 113910 NC_000014.9 velvet.60870 99.98 True relocation, scaffold gap is present, inconsistency = 8239461 104965433 104971403 119889 113921 NC_000014.9 velvet.60870 99.87 True fake: scaffold gap size wrong estimation (local) 104964001 104965134 122118 120985 NC_000014.9 velvet.60870 99.82 True fake: scaffold gap size wrong estimation (local) 104961514 104962536 125495 124480 NC_000014.9 velvet.60870 99.32 True fake: scaffold gap size wrong estimation (local) 104958424 104959063 129162 128523 NC_000014.9 velvet.60870 100.0 True inversion, scaffold gap is present 104971537 104978311 136031 142805 NC_000014.9 velvet.60870 99.97 True fake: scaffold gap size wrong estimation (local) 104978537 104985280 143894 150637 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 104985571 104987625 151775 153829 NC_000014.9 velvet.60870 99.9 True fake: scaffold gap size wrong estimation (local) 104988643 104990459 155616 157431 NC_000014.9 velvet.60870 99.89 True fake: scaffold gap size wrong estimation (extensive) 105003869 105004471 163501 164080 NC_000014.9 velvet.60870 95.95 True fake: scaffold gap size wrong estimation (local) 105005453 105008700 166001 169248 NC_000014.9 velvet.60870 99.88 True fake: scaffold gap size wrong estimation (local) 105009271 105015726 172089 178543 NC_000014.9 velvet.60870 99.64 True fake: scaffold gap size wrong estimation (local) 105015952 105017269 179564 180881 NC_000014.9 velvet.60870 99.85 True fake: scaffold gap size wrong estimation (local) 105017851 105018753 181814 182716 NC_000014.9 velvet.60870 99.67 True fake: scaffold gap size wrong estimation (local) 105019038 105019668 183445 184075 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105021343 105022210 186770 187637 NC_000014.9 velvet.60870 99.88 True fake: scaffold gap size wrong estimation (local) 105023409 105024504 188612 189707 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105026958 105027604 192690 193336 NC_000014.9 velvet.60870 100.0 True local misassembly 105027876 105028726 193337 194187 NC_000014.9 velvet.60870 98.24 True relocation, scaffold gap is present, inconsistency = 45017981 60000238 60009512 203859 194570 NC_000014.9 velvet.60870 99.32 True fake: scaffold gap size wrong estimation (local) 59996008 60000084 208892 204816 NC_000014.9 velvet.60870 99.9 True relocation, scaffold gap is present, inconsistency = -22583 60013088 60018580 215006 208903 NC_000014.9 velvet.60870 99.24 True fake: scaffold gap size wrong estimation (local) 60011342 60012946 217163 215559 NC_000014.9 velvet.60870 99.81 True relocation, scaffold gap is present, inconsistency = -45032328 105038658 105039201 222175 221632 NC_000014.9 velvet.60870 98.16 True local misassembly 105037801 105038495 222870 222176 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105035744 105036405 226043 225382 NC_000014.9 velvet.60870 98.49 True fake: scaffold gap size wrong estimation (local) 105033673 105034794 229209 228088 NC_000014.9 velvet.60870 99.73 True local misassembly 105032763 105033486 229933 229210 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105031245 105031777 232494 231961 NC_000014.9 velvet.60870 99.44 True fake: scaffold gap size wrong estimation (local) 105026022 105026538 233169 232653 NC_000014.9 velvet.60870 100.0 True relocation, scaffold gap is present, inconsistency = 14322 105041826 105044242 234135 236551 NC_000014.9 velvet.60870 99.71 True fake: scaffold gap size wrong estimation (local) 105044514 105045340 237388 238214 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105045588 105046475 238755 239639 NC_000014.9 velvet.60870 99.66 True fake: scaffold gap size wrong estimation (local) 105046865 105048493 240316 241944 NC_000014.9 velvet.60870 99.88 True relocation, scaffold gap is present, inconsistency = 45074680 59968973 59970157 245156 243972 NC_000014.9 velvet.60870 99.92 True fake: scaffold gap size wrong estimation (local) 59942708 59945128 270217 267798 NC_000014.9 velvet.60870 99.88 True fake: scaffold gap size wrong estimation (local) 59939117 59942524 274633 271034 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 59935296 59938828 279199 275597 NC_000014.9 velvet.60870 99.91 True relocation, scaffold gap is present, inconsistency = 45130158 105069595 105071370 279808 281583 NC_000014.9 velvet.60870 99.83 True fake: scaffold gap size wrong estimation (local) 105098191 105099275 308228 309312 NC_000014.9 velvet.60870 99.91 True local misassembly 105096459 105098166 309323 311065 NC_000014.9 velvet.60870 97.64 True fake: scaffold gap size wrong estimation (extensive) 105108067 105108745 311076 311754 NC_000014.9 velvet.60870 100.0 True relocation, scaffold gap is present, inconsistency = -21147 105087609 105092970 311765 317214 NC_000014.9 velvet.60870 99.87 True fake: scaffold gap size wrong estimation (local) 105093529 105094946 318461 319912 NC_000014.9 velvet.60870 99.78 True fake: scaffold gap size wrong estimation (local) 105095143 105096071 320254 321182 NC_000014.9 velvet.60870 100.0 True fake: not a misassembly (possible transposable element) 59929787 59935002 326453 321231 NC_000014.9 velvet.60870 99.94 True fake: not a misassembly (possible transposable element) 105100881 105101471 326906 327496 NC_000014.9 velvet.60870 100.0 True relocation, scaffold gap is present, inconsistency = 21910736 83180889 83186412 336752 331229 NC_000014.9 velvet.60870 99.87 True fake: scaffold gap size wrong estimation (local) 83178828 83180589 339654 337910 NC_000014.9 velvet.60870 98.67 True fake: scaffold gap size wrong estimation (local) 83171384 83174463 346641 343480 NC_000014.9 velvet.60870 99.8 True relocation, scaffold gap is present, inconsistency = 23241011 59923915 59929027 353173 347987 NC_000014.9 velvet.60870 99.78 True relocation, scaffold gap is present, inconsistency = -23254869 83174533 83178680 357424 353277 NC_000014.9 velvet.60870 99.78 True relocation, scaffold gap is present, inconsistency = 27160484 56010248 56014038 357435 361225 NC_000014.9 velvet.60870 100.0 True relocation, scaffold gap is present, inconsistency = 27134669 83148718 83160655 361236 373872 NC_000014.9 velvet.60870 99.86 True fake: scaffold gap size wrong estimation (local) 83160759 83165955 374734 379930 NC_000014.9 velvet.60870 99.81 True fake: scaffold gap size wrong estimation (local) 83166056 83167732 380704 382380 NC_000014.9 velvet.60870 99.94 True fake: scaffold gap size wrong estimation (local) 83168003 83169379 383174 384550 NC_000014.9 velvet.60870 99.42 True relocation, scaffold gap is present, inconsistency = -20662968 62507015 62510092 385154 388231 NC_000014.9 velvet.60870 99.97 True relocation, scaffold gap is present, inconsistency = 2600943 59900356 59906061 394871 388242 NC_000014.9 velvet.60870 99.98 True fake: scaffold gap size wrong estimation (local) 59893530 59900062 402400 395870 NC_000014.9 velvet.60870 99.82 True inversion, scaffold gap is present 59914620 59921736 410804 417920 NC_000014.9 velvet.60870 99.97 True fake: scaffold gap size wrong estimation (local) 59922024 59923716 418978 420670 NC_000014.9 velvet.60870 100.0 True relocation, scaffold gap is present, inconsistency = 71282 59995009 59995705 421377 420681 NC_000014.9 velvet.60870 99.71 True fake: scaffold gap size wrong estimation (local) 59990193 59991725 426481 424960 NC_000014.9 velvet.60870 98.23 True fake: scaffold gap size wrong estimation (local) 59979962 59989926 438698 427680 NC_000014.9 velvet.60870 99.8 True fake: scaffold gap size wrong estimation (local) 59975166 59979126 444657 440585 NC_000014.9 velvet.60870 99.85 True fake: scaffold gap size wrong estimation (local) 59970749 59975031 449877 445563 NC_000014.9 velvet.60870 98.93 True relocation, scaffold gap is present, inconsistency = 45087293 105064635 105068238 452188 455791 NC_000014.9 velvet.60870 99.72 True fake: scaffold gap size wrong estimation (local) 105068774 105069401 456935 457562 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105071404 105075182 460196 463974 NC_000014.9 velvet.60870 99.79 True fake: scaffold gap size wrong estimation (local) 105083578 105086308 467547 470365 NC_000014.9 velvet.60870 99.93 True fake: scaffold gap size wrong estimation (local) 105086594 105087599 471532 472536 NC_000014.9 velvet.60870 99.7 True relocation, scaffold gap is present, inconsistency = 22670911 82413343 82415660 474973 472559 NC_000014.9 velvet.60870 99.74 True fake: scaffold gap size wrong estimation (local) 82409588 82413232 479531 475746 NC_000014.9 velvet.60870 99.64 True fake: scaffold gap size wrong estimation (local) 82408171 82409446 481439 480164 NC_000014.9 velvet.60870 99.92 True fake: scaffold gap size wrong estimation (local) 82402529 82407863 487866 482532 NC_000014.9 velvet.60870 99.79 True fake: scaffold gap size wrong estimation (local) 82401196 82402257 490005 488944 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 82395673 82401130 496162 490705 NC_000014.9 velvet.60870 99.85 True relocation, scaffold gap is present, inconsistency = 61003 82324309 82334659 506523 496173 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (extensive) 82303903 82308619 536700 531983 NC_000014.9 velvet.60870 99.94 True fake: scaffold gap size wrong estimation (local) 82296770 82303636 544595 537728 NC_000014.9 velvet.60870 99.9 True relocation, scaffold gap is present, inconsistency = 6485629 88798682 88799910 554012 555234 NC_000014.9 velvet.60870 99.43 True relocation, scaffold gap is present, inconsistency = -9194131 79605790 79607690 555245 557145 NC_000014.9 velvet.60870 99.95 True fake: scaffold gap size wrong estimation (local) 79612761 79615570 557731 560540 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 79615861 79618563 562003 564705 NC_000014.9 velvet.60870 99.67 True fake: scaffold gap size wrong estimation (local) 79618669 79622619 565485 569494 NC_000014.9 velvet.60870 98.48 True fake: scaffold gap size wrong estimation (local) 79622900 79624802 570490 572390 NC_000014.9 velvet.60870 99.84 True relocation, scaffold gap is present, inconsistency = 25483222 105109807 105110333 574173 574699 NC_000014.9 velvet.60870 99.81 True fake: not a misassembly (possible transposable element) 105099712 105100517 575846 576651 NC_000014.9 velvet.60870 100.0 True fake: not a misassembly (possible transposable element) 105115130 105116395 577349 578614 NC_000014.9 velvet.60870 99.84 True relocation, scaffold gap is present, inconsistency = -14705 105102061 105104586 578985 581510 NC_000014.9 velvet.60870 99.68 True fake: scaffold gap size wrong estimation (local) 105104812 105105960 582514 583662 NC_000014.9 velvet.60870 99.83 True fake: scaffold gap size wrong estimation (local) 105106288 105106791 584005 584508 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105106889 105107511 584889 585511 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (extensive) 105116673 105125521 585822 594721 NC_000014.9 velvet.60870 99.85 True fake: scaffold gap size wrong estimation (local) 105132191 105135210 594732 597802 NC_000014.9 velvet.60870 99.93 True relocation, scaffold gap is present, inconsistency = -9160 105126061 105127462 597813 599214 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105128999 105130154 601597 602754 NC_000014.9 velvet.60870 99.65 True fake: scaffold gap size wrong estimation (local) 105131103 105131965 604815 605677 NC_000014.9 velvet.60870 99.88 True relocation, scaffold gap is present, inconsistency = -35063570 70068638 70072441 605920 609608 NC_000014.9 velvet.60870 96.84 True relocation, scaffold gap is present, inconsistency = 35054000 105127746 105128480 610913 611647 NC_000014.9 velvet.60870 100.0 True fake: not a misassembly (possible transposable element) 70066845 70068413 611665 613233 NC_000014.9 velvet.60870 100.0 True fake: not a misassembly (possible transposable element) 105136252 105149824 614361 627932 NC_000014.9 velvet.60870 99.79 True relocation, scaffold gap is present, inconsistency = -16324379 88826675 88836804 629162 639852 NC_000014.9 velvet.60870 99.89 True fake: scaffold gap size wrong estimation (local) 88837072 88844561 640445 647934 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 88844845 88846080 648814 650049 NC_000014.9 velvet.60870 99.92 True relocation, scaffold gap is present, inconsistency = 16329508 105175702 105180344 650163 654804 NC_000014.9 velvet.60870 99.74 True fake: scaffold gap size wrong estimation (local) 105180486 105181108 655323 655945 NC_000014.9 velvet.60870 100.0 True relocation, scaffold gap is present, inconsistency = -10440866 94740253 94741550 655956 657253 NC_000014.9 velvet.60870 100.0 True local misassembly 94741766 94742413 657254 657901 NC_000014.9 velvet.60870 98.46 True fake: scaffold gap size wrong estimation (local) 94746185 94747304 657912 659023 NC_000014.9 velvet.60870 99.29 True relocation, scaffold gap is present, inconsistency = 60125842 34619412 34620332 659954 659034 NC_000014.9 velvet.60870 100.0 True relocation, scaffold gap is present, inconsistency = -47675999 82291282 82295311 664499 660054 NC_000014.9 velvet.60870 99.95 True fake: scaffold gap size wrong estimation (local) 82283884 82285584 667439 665735 NC_000014.9 velvet.60870 99.47 True fake: scaffold gap size wrong estimation (local) 82282366 82283624 669338 668080 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 82278103 82282229 674257 670131 NC_000014.9 velvet.60870 99.9 True relocation, scaffold gap is present, inconsistency = 14672228 67604689 67605717 675443 674415 NC_000014.9 velvet.60870 98.93 True fake: scaffold gap size wrong estimation (local) 67601840 67603795 678697 676743 NC_000014.9 velvet.60870 98.72 True relocation, scaffold gap is present, inconsistency = 12037502 79641308 79645386 678708 682786 NC_000014.9 velvet.60870 99.95 True local misassembly 79648219 79656630 682787 691198 NC_000014.9 velvet.60870 99.88 True fake: scaffold gap size wrong estimation (local) 79656631 79659203 691276 693848 NC_000014.9 velvet.60870 99.34 True fake: scaffold gap size wrong estimation (local) 79659204 79661921 694616 697333 NC_000014.9 velvet.60870 99.26 True indel: indel (<= 5bp) 79661922 79662585 697339 698002 NC_000014.9 velvet.60870 98.95 True relocation, scaffold gap is present, inconsistency = -45075330 34590462 34591240 701209 701987 NC_000014.9 velvet.60870 99.87 True fake: scaffold gap size wrong estimation (local) 34592370 34593416 704463 705509 NC_000014.9 velvet.60870 99.81 True relocation, scaffold gap is present, inconsistency = 70540387 105151239 105159719 722945 732338 NC_000014.9 velvet.60870 99.92 True fake: scaffold gap size wrong estimation (local) 105161242 105167529 734809 740995 NC_000014.9 velvet.60870 98.2 True fake: not a misassembly (possible transposable element) 105150054 105151203 741006 742155 NC_000014.9 velvet.60870 99.83 True fake: not a misassembly (possible transposable element) 105168960 105175415 743233 749688 NC_000014.9 velvet.60870 99.78 True fake: scaffold gap size wrong estimation (local) 105181944 105183462 752855 754373 NC_000014.9 velvet.60870 99.67 True fake: scaffold gap size wrong estimation (local) 105183560 105185081 755245 756765 NC_000014.9 velvet.60870 99.87 True fake: scaffold gap size wrong estimation (local) 105185217 105186218 757103 758104 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105187105 105188404 759476 760775 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105188505 105190176 761236 762981 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105190448 105191485 764048 765085 NC_000014.9 velvet.60870 100.0 True indel: indel (<= 5bp) 105191486 105192324 765087 765925 NC_000014.9 velvet.60870 99.64 True local misassembly 105192832 105195265 765926 768359 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105195669 105206300 768719 779350 NC_000014.9 velvet.60870 99.7 True fake: scaffold gap size wrong estimation (local) 105206963 105209839 779461 782337 NC_000014.9 velvet.60870 99.83 True fake: scaffold gap size wrong estimation (local) 105209840 105213427 782397 785984 NC_000014.9 velvet.60870 99.8 True fake: scaffold gap size wrong estimation (local) 105244378 105245106 815180 815908 NC_000014.9 velvet.60870 100.0 True local misassembly 105240948 105242431 815938 817421 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105245389 105246129 821408 822148 NC_000014.9 velvet.60870 100.0 True relocation, scaffold gap is present, inconsistency = -32670 105213470 105222645 822159 831173 NC_000014.9 velvet.60870 97.66 True fake: scaffold gap size wrong estimation (local) 105228575 105229655 831184 832264 NC_000014.9 velvet.60870 99.81 True relocation, scaffold gap is present, inconsistency = -7155 105223402 105225661 833166 835336 NC_000014.9 velvet.60870 95.86 True fake: scaffold gap size wrong estimation (local) 105225944 105226892 836452 837400 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105227400 105228303 840283 841186 NC_000014.9 velvet.60870 99.89 True fake: scaffold gap size wrong estimation (local) 105246760 105248571 861098 862909 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105249019 105254290 864224 869525 NC_000014.9 velvet.60870 99.4 True fake: scaffold gap size wrong estimation (local) 105254865 105256016 870705 871856 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105256146 105258240 872582 874676 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105258807 105259668 875799 876663 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105259762 105260426 876773 877437 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105260667 105262753 878408 880494 NC_000014.9 velvet.60870 99.95 True fake: scaffold gap size wrong estimation (local) 105266053 105270189 885361 889594 NC_000014.9 velvet.60870 99.0 True fake: scaffold gap size wrong estimation (local) 105270790 105271904 891082 892196 NC_000014.9 velvet.60870 99.55 True fake: scaffold gap size wrong estimation (local) 105272245 105273518 892313 893586 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105274475 105275926 895471 896922 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105279022 105281070 901262 903344 NC_000014.9 velvet.60870 97.74 True fake: scaffold gap size wrong estimation (local) 105281777 105282710 904520 905453 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105282956 105286639 906186 909869 NC_000014.9 velvet.60870 99.97 True fake: scaffold gap size wrong estimation (local) 105286769 105288223 910865 912319 NC_000014.9 velvet.60870 100.0 True relocation, scaffold gap is present, inconsistency = -3368365 101929504 101930420 921965 922881 NC_000014.9 velvet.60870 99.89 True relocation, scaffold gap is present, inconsistency = -14721588 87208910 87218326 922959 933352 NC_000014.9 velvet.60870 99.88 True fake: scaffold gap size wrong estimation (local) 87218478 87221464 934225 937214 NC_000014.9 velvet.60870 99.87 True fake: scaffold gap size wrong estimation (local) 87221661 87222229 937836 938404 NC_000014.9 velvet.60870 99.82 True fake: scaffold gap size wrong estimation (local) 87222516 87230243 938961 946980 NC_000014.9 velvet.60870 98.14 True relocation, scaffold gap is present, inconsistency = 18058730 105290415 105291482 948422 949489 NC_000014.9 velvet.60870 99.06 True fake: scaffold gap size wrong estimation (local) 105292366 105295239 951407 954280 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105295338 105295985 954481 955190 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105297962 105298601 957435 958074 NC_000014.9 velvet.60870 98.12 True fake: scaffold gap size wrong estimation (local) 105299412 105301892 959921 962410 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105303531 105304249 964888 965606 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105305387 105306313 967311 968237 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105306902 105308094 969036 970633 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 105308785 105309798 971669 972681 NC_000014.9 velvet.60870 99.9 True fake: scaffold gap size wrong estimation (local) 105342965 105343712 1003137 1003884 NC_000014.9 velvet.60870 100.0 True relocation, scaffold gap is present, inconsistency = 13302 105357025 105359357 1006227 1003895 NC_000014.9 velvet.60870 100.0 True local misassembly 105354372 105356720 1008576 1006228 NC_000014.9 velvet.60870 99.96 True relocation, scaffold gap is present, inconsistency = 9286 105340048 105342383 1011279 1013606 NC_000014.9 velvet.60870 99.32 True relocation, scaffold gap is present, inconsistency = 18132818 87199218 87207219 1021730 1013617 NC_000014.9 velvet.60870 99.94 True relocation, scaffold gap is present, inconsistency = -18153402 105346969 105351580 1027155 1022770 NC_000014.9 velvet.60870 95.1 True fake: scaffold gap size wrong estimation (local) 105345377 105346459 1029637 1028555 NC_000014.9 velvet.60870 100.0 True relocation, scaffold gap is present, inconsistency = 15600859 89741517 89744507 1029648 1032638 NC_000014.9 velvet.60870 99.77 True local misassembly 89737642 89738495 1032649 1033502 NC_000014.9 velvet.60870 99.88 True relocation, scaffold gap is present, inconsistency = 2548950 87182244 87188681 1040262 1033513 NC_000014.9 velvet.60870 95.38 True fake: scaffold gap size wrong estimation (local) 87180918 87181998 1042096 1041016 NC_000014.9 velvet.60870 99.07 True fake: scaffold gap size wrong estimation (local) 87179952 87180893 1044075 1043134 NC_000014.9 velvet.60870 100.0 True relocation, scaffold gap is present, inconsistency = -2621820 89801060 89801761 1044787 1044086 NC_000014.9 velvet.60870 99.57 True fake: scaffold gap size wrong estimation (local) 89800137 89800756 1045533 1044918 NC_000014.9 velvet.60870 99.35 True fake: scaffold gap size wrong estimation (local) 89799051 89799902 1047102 1046251 NC_000014.9 velvet.60870 100.0 True relocation, scaffold gap is present, inconsistency = 60641144 29153941 29157896 1051168 1047113 NC_000014.9 velvet.60870 99.9 True fake: scaffold gap size wrong estimation (local) 29152235 29153662 1053617 1052190 NC_000014.9 velvet.60870 99.93 True fake: scaffold gap size wrong estimation (local) 29150906 29151804 1054849 1053974 NC_000014.9 velvet.60870 96.97 True fake: not a misassembly (possible transposable element) 83188337 83189203 1064452 1063547 NC_000014.9 velvet.60870 97.95 True fake: not a misassembly (possible transposable element) 29136327 29138966 1068006 1065367 NC_000014.9 velvet.60870 100.0 True relocation, scaffold gap is present, inconsistency = 12053290 41192648 41194370 1068398 1070119 NC_000014.9 velvet.60870 99.88 True relocation, scaffold gap is present, inconsistency = 3478047 44673759 44674664 1071461 1072366 NC_000014.9 velvet.60870 100.0 True relocation, scaffold gap is present, inconsistency = 39208161 83882836 83885208 1074749 1072377 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 83881707 83882470 1076406 1075643 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 83879112 83881321 1079522 1077287 NC_000014.9 velvet.60870 98.75 True fake: scaffold gap size wrong estimation (local) 83873316 83878843 1086148 1080605 NC_000014.9 velvet.60870 98.98 True relocation, scaffold gap is present, inconsistency = 31378 83910357 83918218 1086284 1094141 NC_000014.9 velvet.60870 99.95 True fake: scaffold gap size wrong estimation (local) 83918463 83919677 1094928 1096142 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 83919950 83923443 1096859 1100352 NC_000014.9 velvet.60870 100.0 True relocation, scaffold gap is present, inconsistency = 5834266 89759606 89764860 1108385 1102249 NC_000014.9 velvet.60870 99.81 True fake: scaffold gap size wrong estimation (local) 89758696 89759439 1110100 1109357 NC_000014.9 velvet.60870 100.0 True relocation, scaffold gap is present, inconsistency = 5829972 83923462 83925439 1113385 1115362 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 83930446 83932181 1115373 1117181 NC_000014.9 velvet.60870 95.52 True fake: scaffold gap size wrong estimation (local) 83932460 83934545 1118275 1120360 NC_000014.9 velvet.60870 99.95 True relocation, scaffold gap is present, inconsistency = -39258411 44677674 44681768 1121900 1125988 NC_000014.9 velvet.60870 99.8 True fake: not a misassembly (possible transposable element) 29737367 29738776 1125999 1127408 NC_000014.9 velvet.60870 100.0 True fake: not a misassembly (possible transposable element) 44682027 44682812 1127419 1128204 NC_000014.9 velvet.60870 100.0 True relocation, scaffold gap is present, inconsistency = -14943935 29738888 29740750 1128215 1129991 NC_000014.9 velvet.60870 95.3 True fake: scaffold gap size wrong estimation (local) 29741246 29744673 1131313 1134740 NC_000014.9 velvet.60870 99.85 True fake: scaffold gap size wrong estimation (local) 29744808 29745534 1135637 1136363 NC_000014.9 velvet.60870 99.72 True fake: scaffold gap size wrong estimation (local) 29745621 29747814 1136493 1138685 NC_000014.9 velvet.60870 99.95 True fake: scaffold gap size wrong estimation (local) 29768741 29769315 1154880 1155454 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 29770969 29773214 1157984 1160229 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 29773491 29775194 1161348 1163051 NC_000014.9 velvet.60870 100.0 True relocation, scaffold gap is present, inconsistency = 54165846 83941122 83944110 1163133 1166168 NC_000014.9 velvet.60870 96.48 True relocation, scaffold gap is present, inconsistency = 8894016 92845763 92848495 1173805 1176777 NC_000014.9 velvet.60870 99.67 True fake: scaffold gap size wrong estimation (local) 92849466 92850946 1178166 1179646 NC_000014.9 velvet.60870 99.93 True fake: scaffold gap size wrong estimation (local) 92851168 92852558 1182480 1183870 NC_000014.9 velvet.60870 99.86 True relocation, scaffold gap is present, inconsistency = -8887678 83964891 83967995 1183881 1186984 NC_000014.9 velvet.60870 99.94 True fake: scaffold gap size wrong estimation (local) 83968137 83970524 1187971 1190336 NC_000014.9 velvet.60870 99.07 True relocation, scaffold gap is present, inconsistency = 8892075 92862610 92864781 1190347 1192518 NC_000014.9 velvet.60870 99.91 True relocation, scaffold gap is present, inconsistency = -16587 92848670 92849450 1192994 1193774 NC_000014.9 velvet.60870 100.0 True relocation, scaffold gap is present, inconsistency = -8878684 83970777 83980191 1193785 1203466 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 83980385 83981496 1204117 1205228 NC_000014.9 velvet.60870 99.82 True fake: scaffold gap size wrong estimation (local) 83999249 84000422 1220497 1221670 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 84000706 84002458 1222479 1224231 NC_000014.9 velvet.60870 99.94 True fake: scaffold gap size wrong estimation (local) 84002725 84004577 1225110 1226962 NC_000014.9 velvet.60870 100.0 True relocation, scaffold gap is present, inconsistency = -22766 83982421 83984140 1227572 1229291 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 83984766 83985347 1231059 1231640 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 84006524 84014939 1257372 1265787 NC_000014.9 velvet.60870 99.95 True fake: scaffold gap size wrong estimation (local) 84015247 84028220 1266848 1279804 NC_000014.9 velvet.60870 99.75 True relocation, scaffold gap is present, inconsistency = 9296384 74717352 74718065 1281315 1280602 NC_000014.9 velvet.60870 98.6 True fake: scaffold gap size wrong estimation (local) 74714277 74717173 1285316 1282324 NC_000014.9 velvet.60870 99.9 True fake: scaffold gap size wrong estimation (local) 74711544 74714170 1288287 1285634 NC_000014.9 velvet.60870 99.77 True fake: scaffold gap size wrong estimation (local) 74707921 74710948 1292644 1289617 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 74705313 74707089 1296078 1294302 NC_000014.9 velvet.60870 99.94 True relocation, scaffold gap is present, inconsistency = 9332332 84039432 84044343 1296089 1301121 NC_000014.9 velvet.60870 99.13 True fake: scaffold gap size wrong estimation (local) 84044762 84047123 1302297 1304658 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 84047372 84049035 1305633 1307296 NC_000014.9 velvet.60870 100.0 True relocation, scaffold gap is present, inconsistency = 34965 84084209 84085619 1309171 1307505 NC_000014.9 velvet.60870 99.4 True relocation, scaffold gap is present, inconsistency = 9401838 74669164 74672486 1319056 1322446 NC_000014.9 velvet.60870 99.97 True fake: scaffold gap size wrong estimation (local) 74672609 74674359 1323250 1325000 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 74678528 74679572 1325484 1326480 NC_000014.9 velvet.60870 95.27 True fake: scaffold gap size wrong estimation (local) 74680093 74680938 1326655 1327500 NC_000014.9 velvet.60870 99.76 True local misassembly 74677849 74678429 1327780 1328360 NC_000014.9 velvet.60870 99.83 True local misassembly 74674621 74676818 1328456 1330653 NC_000014.9 velvet.60870 100.0 True relocation, scaffold gap is present, inconsistency = -46432520 28244309 28248484 1330664 1334839 NC_000014.9 velvet.60870 99.86 True relocation, scaffold gap is present, inconsistency = 46433348 74681843 74688013 1341013 1334850 NC_000014.9 velvet.60870 99.74 True fake: scaffold gap size wrong estimation (local) 74680953 74681495 1342633 1342086 NC_000014.9 velvet.60870 99.81 True relocation, scaffold gap is present, inconsistency = 13874 74695380 74696715 1342644 1343979 NC_000014.9 velvet.60870 100.0 True fake: scaffold gap size wrong estimation (local) 74696997 74700527 1345059 1349586 NC_000014.9 velvet.60870 95.06 True fake: scaffold gap size wrong estimation (local) 74731109 74735584 1375006 1380118 NC_000014.9 velvet.60870 99.98 True fake: scaffold gap size wrong estimation (local) 74763828 74766581 1406313 1409066 NC_000014.9 velvet.60870 99.93 True fake: scaffold gap size wrong estimation (local) 74768538 74769099 1411742 1412303 NC_000014.9 velvet.60870 99.82 True CONTIG velvet.60870 1412375 misassembled CONTIG velvet.60902 33567 unaligned CONTIG velvet.60919 266 unaligned 49132250 49134543 5390 7683 NC_000014.9 velvet.60930 99.96 True fake: scaffold gap size wrong estimation (local) 49134837 49144005 8786 18149 NC_000014.9 velvet.60930 99.88 True CONTIG velvet.60930 53932 correct 22510865 22514383 1 3519 NC_000014.9 velvet.60938 99.94 True fake: scaffold gap size wrong estimation (local) 22515110 22516027 5035 5952 NC_000014.9 velvet.60938 99.89 True fake: scaffold gap size wrong estimation (extensive) 22528119 22530880 9230 11991 NC_000014.9 velvet.60938 99.89 True fake: scaffold gap size wrong estimation (local) 22534741 22543671 20530 29459 NC_000014.9 velvet.60938 99.93 True fake: scaffold gap size wrong estimation (local) 22543963 22548623 30529 35295 NC_000014.9 velvet.60938 99.94 True fake: scaffold gap size wrong estimation (local) 22548962 22551221 36375 38634 NC_000014.9 velvet.60938 99.96 True fake: scaffold gap size wrong estimation (extensive) 22561196 22562259 38645 39708 NC_000014.9 velvet.60938 99.81 True fake: scaffold gap size wrong estimation (local) 22563546 22564489 41949 42892 NC_000014.9 velvet.60938 99.15 True fake: not a misassembly (possible transposable element) 22551450 22554150 42903 45582 NC_000014.9 velvet.60938 98.85 True fake: not a misassembly (possible transposable element) 22564521 22566350 45593 47422 NC_000014.9 velvet.60938 99.95 True relocation, scaffold gap is present, inconsistency = -11870 22554491 22559061 47433 52138 NC_000014.9 velvet.60938 96.84 True fake: scaffold gap size wrong estimation (local) 22559093 22559796 52866 53569 NC_000014.9 velvet.60938 99.86 True fake: scaffold gap size wrong estimation (local) 22560109 22561164 53927 54982 NC_000014.9 velvet.60938 99.34 True fake: scaffold gap size wrong estimation (extensive) 22569466 22571025 55396 56955 NC_000014.9 velvet.60938 99.68 True fake: scaffold gap size wrong estimation (local) 22590975 22596105 75197 80293 NC_000014.9 velvet.60938 99.26 True fake: scaffold gap size wrong estimation (local) 22597262 22604260 82335 89493 NC_000014.9 velvet.60938 99.87 True fake: scaffold gap size wrong estimation (local) 22604908 22608718 90916 94726 NC_000014.9 velvet.60938 99.87 True fake: scaffold gap size wrong estimation (local) 22609300 22610121 95891 96712 NC_000014.9 velvet.60938 99.88 True relocation, scaffold gap is present, inconsistency = 24399 22641633 22642310 103825 104502 NC_000014.9 velvet.60938 99.85 True relocation, scaffold gap is present, inconsistency = -17350 22625923 22627236 105465 106778 NC_000014.9 velvet.60938 100.0 True fake: scaffold gap size wrong estimation (local) 22627414 22630882 107791 112038 NC_000014.9 velvet.60938 99.74 True relocation, scaffold gap is present, inconsistency = 15473 22648142 22652115 113825 118548 NC_000014.9 velvet.60938 99.9 True fake: scaffold gap size wrong estimation (local) 22711504 22713082 172919 174506 NC_000014.9 velvet.60938 100.0 True relocation, scaffold gap is present, inconsistency = 5494526 28207619 28209030 175928 174517 NC_000014.9 velvet.60938 100.0 True fake: scaffold gap size wrong estimation (local) 28206509 28207365 177975 177119 NC_000014.9 velvet.60938 99.88 True fake: not a misassembly (possible transposable element) 22713472 22715239 177986 179753 NC_000014.9 velvet.60938 99.83 True fake: not a misassembly (possible transposable element) 28204513 28206448 181720 179827 NC_000014.9 velvet.60938 97.66 True fake: scaffold gap size wrong estimation (local) 28201781 28203211 185704 184274 NC_000014.9 velvet.60938 100.0 True fake: not a misassembly (possible transposable element) 22718544 22719505 186518 187479 NC_000014.9 velvet.60938 99.48 True fake: not a misassembly (possible transposable element) 28199817 28201605 189278 187490 NC_000014.9 velvet.60938 99.83 True relocation, scaffold gap is present, inconsistency = 5444369 22732152 22733163 211563 212574 NC_000014.9 velvet.60938 99.8 True fake: scaffold gap size wrong estimation (local) 22733808 22734740 213076 214008 NC_000014.9 velvet.60938 100.0 True fake: scaffold gap size wrong estimation (local) 22737054 22737697 216943 217586 NC_000014.9 velvet.60938 100.0 True relocation, scaffold gap is present, inconsistency = 12022 22750407 22751533 218274 219400 NC_000014.9 velvet.60938 99.65 True local misassembly 22749207 22750119 219411 220323 NC_000014.9 velvet.60938 100.0 True local misassembly 22747668 22749102 220334 221768 NC_000014.9 velvet.60938 99.79 True fake: scaffold gap size wrong estimation (local) 22752577 22753487 221779 222689 NC_000014.9 velvet.60938 100.0 True fake: scaffold gap size wrong estimation (local) 22755114 22756003 225570 226459 NC_000014.9 velvet.60938 100.0 True fake: scaffold gap size wrong estimation (local) 22759198 22759708 228567 229077 NC_000014.9 velvet.60938 100.0 True fake: scaffold gap size wrong estimation (local) 22760339 22761556 232593 233810 NC_000014.9 velvet.60938 100.0 True fake: scaffold gap size wrong estimation (local) 22762375 22763489 235680 236783 NC_000014.9 velvet.60938 98.91 True fake: scaffold gap size wrong estimation (local) 22795774 22798041 265096 267363 NC_000014.9 velvet.60938 99.69 True fake: scaffold gap size wrong estimation (local) 22802454 22803163 267374 268083 NC_000014.9 velvet.60938 99.72 True local misassembly 22798304 22799462 268468 269630 NC_000014.9 velvet.60938 99.57 True fake: not a misassembly (possible transposable element) 22780231 22782138 269641 271548 NC_000014.9 velvet.60938 99.84 True fake: not a misassembly (possible transposable element) 22803427 22804126 276601 277300 NC_000014.9 velvet.60938 99.86 True fake: scaffold gap size wrong estimation (local) 22807200 22807972 277311 278083 NC_000014.9 velvet.60938 99.48 True fake: scaffold gap size wrong estimation (local) 22808633 22809223 278464 279054 NC_000014.9 velvet.60938 98.31 True fake: scaffold gap size wrong estimation (local) 22810979 22811602 281796 282419 NC_000014.9 velvet.60938 100.0 True fake: scaffold gap size wrong estimation (local) 22812819 22813664 284044 284889 NC_000014.9 velvet.60938 100.0 True fake: scaffold gap size wrong estimation (local) 22814500 22816229 286303 288032 NC_000014.9 velvet.60938 99.94 True fake: scaffold gap size wrong estimation (local) 22821354 22823833 288043 290522 NC_000014.9 velvet.60938 100.0 True fake: scaffold gap size wrong estimation (local) 22824745 22825375 292324 292954 NC_000014.9 velvet.60938 100.0 True relocation, scaffold gap is present, inconsistency = 42337671 65163709 65165135 293617 295043 NC_000014.9 velvet.60938 100.0 True fake: scaffold gap size wrong estimation (local) 65165769 65167886 296552 298669 NC_000014.9 velvet.60938 99.76 True fake: scaffold gap size wrong estimation (local) 65167990 65169889 299542 301440 NC_000014.9 velvet.60938 99.47 True relocation, scaffold gap is present, inconsistency = -42336955 22833149 22833678 301655 302184 NC_000014.9 velvet.60938 99.81 True fake: scaffold gap size wrong estimation (local) 22834886 22839981 304133 309228 NC_000014.9 velvet.60938 99.92 True fake: scaffold gap size wrong estimation (local) 22840812 22843940 310969 314096 NC_000014.9 velvet.60938 99.81 True fake: scaffold gap size wrong estimation (local) 22850600 22852345 314107 315900 NC_000014.9 velvet.60938 99.83 True relocation, scaffold gap is present, inconsistency = -9342 22844242 22846129 317139 319026 NC_000014.9 velvet.60938 99.52 True local misassembly 22846143 22848437 319564 321858 NC_000014.9 velvet.60938 99.48 True indel: indel (> 5bp) 22848438 22850339 321872 323773 NC_000014.9 velvet.60938 99.84 True fake: scaffold gap size wrong estimation (local) 22852821 22854118 324084 325381 NC_000014.9 velvet.60938 99.85 True fake: scaffold gap size wrong estimation (local) 22855648 22856647 327685 328684 NC_000014.9 velvet.60938 100.0 True local misassembly 22856906 22857579 328734 329407 NC_000014.9 velvet.60938 98.37 True fake: scaffold gap size wrong estimation (local) 22871755 22873540 336923 338708 NC_000014.9 velvet.60938 99.94 True fake: scaffold gap size wrong estimation (local) 22873818 22874636 339271 340089 NC_000014.9 velvet.60938 100.0 True fake: scaffold gap size wrong estimation (local) 22874888 22880141 341132 346385 NC_000014.9 velvet.60938 99.92 True fake: scaffold gap size wrong estimation (local) 22880996 22883181 348095 350280 NC_000014.9 velvet.60938 99.95 True CONTIG velvet.60938 350280 misassembled 60768034 60769214 1391 169 NC_000014.9 velvet.60954 99.83 True fake: scaffold gap size wrong estimation (local) 60766693 60767691 4034 3036 NC_000014.9 velvet.60954 100.0 True fake: scaffold gap size wrong estimation (local) 60745679 60746233 22640 22086 NC_000014.9 velvet.60954 98.2 True local misassembly 60744320 60745468 23789 22641 NC_000014.9 velvet.60954 99.91 True fake: scaffold gap size wrong estimation (local) 60743549 60744159 25645 25035 NC_000014.9 velvet.60954 98.36 True local misassembly 60742326 60743275 26595 25646 NC_000014.9 velvet.60954 98.95 True indel: indel (> 5bp) 60741674 60742284 27206 26596 NC_000014.9 velvet.60954 99.84 True fake: scaffold gap size wrong estimation (local) 60740104 60741371 29595 28328 NC_000014.9 velvet.60954 100.0 True fake: scaffold gap size wrong estimation (local) 60738807 60739873 31109 30043 NC_000014.9 velvet.60954 99.91 True fake: scaffold gap size wrong estimation (local) 60733029 60737773 37485 32741 NC_000014.9 velvet.60954 99.96 True indel: indel (> 5bp) 60731800 60732971 38773 37602 NC_000014.9 velvet.60954 100.0 True fake: scaffold gap size wrong estimation (local) 60728730 60730473 42588 40845 NC_000014.9 velvet.60954 99.94 True fake: scaffold gap size wrong estimation (local) 60727975 60728601 44698 44072 NC_000014.9 velvet.60954 100.0 True relocation, scaffold gap is present, inconsistency = 24283387 36420118 36431619 57667 69647 NC_000014.9 velvet.60954 99.86 True fake: scaffold gap size wrong estimation (local) 36432631 36434222 71437 73028 NC_000014.9 velvet.60954 99.94 True relocation, scaffold gap is present, inconsistency = 946990 37381825 37388167 73641 80210 NC_000014.9 velvet.60954 99.83 True relocation, scaffold gap is present, inconsistency = -30995 37357183 37357692 80221 80730 NC_000014.9 velvet.60954 99.41 True fake: scaffold gap size wrong estimation (local) 37388978 37389941 108108 109071 NC_000014.9 velvet.60954 97.3 True fake: scaffold gap size wrong estimation (local) 37391697 37393418 111470 113190 NC_000014.9 velvet.60954 99.77 True relocation, scaffold gap is present, inconsistency = -930908 36462590 36464661 113270 115341 NC_000014.9 velvet.60954 99.95 True relocation, scaffold gap is present, inconsistency = 58084831 94550077 94550814 115926 116663 NC_000014.9 velvet.60954 99.59 True fake: scaffold gap size wrong estimation (local) 94555828 94556433 122874 123479 NC_000014.9 velvet.60954 99.83 True CONTIG velvet.60954 123479 misassembled CONTIG velvet.60955 314 unaligned CONTIG velvet.60960 245 unaligned 20385644 20386950 1 1307 NC_000014.9 velvet.60968 99.92 True fake: scaffold gap size wrong estimation (local) 20387567 20388896 2485 3814 NC_000014.9 velvet.60968 100.0 True fake: scaffold gap size wrong estimation (local) 20389139 20392847 4731 8423 NC_000014.9 velvet.60968 99.57 True fake: scaffold gap size wrong estimation (local) 20423368 20424452 36125 37209 NC_000014.9 velvet.60968 99.91 True fake: scaffold gap size wrong estimation (local) 20424555 20426254 37946 39645 NC_000014.9 velvet.60968 99.65 True fake: scaffold gap size wrong estimation (local) 20427204 20431485 41326 45607 NC_000014.9 velvet.60968 99.81 True fake: scaffold gap size wrong estimation (local) 20432995 20434298 47987 49290 NC_000014.9 velvet.60968 99.77 True fake: scaffold gap size wrong estimation (local) 20434577 20435552 50158 51133 NC_000014.9 velvet.60968 99.9 True relocation, scaffold gap is present, inconsistency = 74167595 94606340 94607398 55384 54326 NC_000014.9 velvet.60968 100.0 True fake: scaffold gap size wrong estimation (local) 94601572 94602459 56282 55395 NC_000014.9 velvet.60968 100.0 True relocation, scaffold gap is present, inconsistency = 74139010 20452122 20452722 66122 66722 NC_000014.9 velvet.60968 99.67 True fake: not a misassembly (possible transposable element) 94544493 94546742 66910 69159 NC_000014.9 velvet.60968 99.96 True fake: not a misassembly (possible transposable element) 20454204 20463309 69170 78326 NC_000014.9 velvet.60968 99.96 True relocation, scaffold gap is present, inconsistency = 74105544 94568864 94577595 87880 78337 NC_000014.9 velvet.60968 99.92 True fake: scaffold gap size wrong estimation (local) 94565769 94568586 91773 88956 NC_000014.9 velvet.60968 99.96 True fake: scaffold gap size wrong estimation (local) 94556516 94565565 101804 92759 NC_000014.9 velvet.60968 99.83 True inversion, scaffold gap is present 94551794 94552768 101815 102789 NC_000014.9 velvet.60968 99.08 True relocation, scaffold gap is present, inconsistency = 13018569 81518661 81524587 117361 111427 NC_000014.9 velvet.60968 99.95 True relocation, scaffold gap is present, inconsistency = 61013847 20501246 20504467 117708 120929 NC_000014.9 velvet.60968 99.84 True relocation, scaffold gap is present, inconsistency = -9246 20495232 20497267 120940 122975 NC_000014.9 velvet.60968 99.9 True relocation, scaffold gap is present, inconsistency = 28149530 48646808 48655369 132211 122986 NC_000014.9 velvet.60968 97.32 True fake: scaffold gap size wrong estimation (local) 48644251 48646525 135330 132987 NC_000014.9 velvet.60968 99.91 True fake: scaffold gap size wrong estimation (local) 48641634 48644126 138503 136011 NC_000014.9 velvet.60968 99.92 True fake: scaffold gap size wrong estimation (local) 48613227 48615489 169305 167012 NC_000014.9 velvet.60968 98.34 True relocation, scaffold gap is present, inconsistency = 54369717 102988385 102988887 172484 172986 NC_000014.9 velvet.60968 100.0 True fake: not a misassembly (possible transposable element) 20530928 20533481 173254 175808 NC_000014.9 velvet.60968 99.88 True fake: not a misassembly (possible transposable element) 102991150 102992792 175819 177461 NC_000014.9 velvet.60968 100.0 True relocation, scaffold gap is present, inconsistency = -50534242 52458561 52459749 177472 178660 NC_000014.9 velvet.60968 100.0 True relocation, scaffold gap is present, inconsistency = -31925555 20534205 20536191 178671 180657 NC_000014.9 velvet.60968 99.9 True relocation, scaffold gap is present, inconsistency = 82456931 102993133 102994382 180668 181917 NC_000014.9 velvet.60968 99.92 True relocation, scaffold gap is present, inconsistency = -9569 102985474 102987809 182578 184911 NC_000014.9 velvet.60968 99.87 True fake: not a misassembly (possible transposable element) 103054136 103054657 187636 187115 NC_000014.9 velvet.60968 99.81 True fake: not a misassembly (possible transposable element) 102988902 102989617 188288 189003 NC_000014.9 velvet.60968 100.0 True local misassembly 102989860 102991125 189004 190269 NC_000014.9 velvet.60968 99.21 True relocation, scaffold gap is present, inconsistency = -82454737 20536399 20537521 190280 191402 NC_000014.9 velvet.60968 99.91 True fake: scaffold gap size wrong estimation (local) 20537714 20538305 191663 192254 NC_000014.9 velvet.60968 100.0 True fake: scaffold gap size wrong estimation (local) 20539442 20540729 194439 195726 NC_000014.9 velvet.60968 98.91 True fake: scaffold gap size wrong estimation (local) 20541462 20543360 197349 199247 NC_000014.9 velvet.60968 99.89 True fake: not a misassembly (possible transposable element) 92342646 92343603 203958 204915 NC_000014.9 velvet.60968 99.9 True fake: not a misassembly (possible transposable element) 20546081 20547894 204926 206742 NC_000014.9 velvet.60968 99.83 True fake: scaffold gap size wrong estimation (local) 20548112 20548764 207146 207798 NC_000014.9 velvet.60968 100.0 True relocation, scaffold gap is present, inconsistency = 71795223 92343998 92345446 207809 209257 NC_000014.9 velvet.60968 99.93 True relocation, scaffold gap is present, inconsistency = -71810572 20554250 20555325 228633 229707 NC_000014.9 velvet.60968 99.72 True fake: scaffold gap size wrong estimation (local) 20555610 20566918 230610 242703 NC_000014.9 velvet.60968 95.98 True relocation, scaffold gap is present, inconsistency = 14133809 34709070 34709592 251046 251568 NC_000014.9 velvet.60968 100.0 True fake: scaffold gap size wrong estimation (local) 34709711 34714278 252386 257396 NC_000014.9 velvet.60968 99.96 True fake: scaffold gap size wrong estimation (local) 34714687 34716949 258443 260703 NC_000014.9 velvet.60968 99.56 True fake: scaffold gap size wrong estimation (local) 34717223 34717882 262180 262839 NC_000014.9 velvet.60968 99.7 True relocation, scaffold gap is present, inconsistency = -14124342 20593551 20594273 262850 263572 NC_000014.9 velvet.60968 99.72 True fake: scaffold gap size wrong estimation (local) 20594568 20595414 263905 264751 NC_000014.9 velvet.60968 100.0 True fake: scaffold gap size wrong estimation (local) 20596260 20598606 266394 268740 NC_000014.9 velvet.60968 99.96 True fake: scaffold gap size wrong estimation (local) 20598755 20599563 269061 269869 NC_000014.9 velvet.60968 100.0 True fake: scaffold gap size wrong estimation (local) 20599821 20603308 270764 274252 NC_000014.9 velvet.60968 99.68 True local misassembly 20604805 20605484 274253 274932 NC_000014.9 velvet.60968 99.88 True fake: scaffold gap size wrong estimation (local) 20605771 20608310 276106 278645 NC_000014.9 velvet.60968 99.92 True fake: scaffold gap size wrong estimation (local) 20608663 20613427 279765 284529 NC_000014.9 velvet.60968 99.92 True inversion, scaffold gap is present 20603279 20604630 285902 284551 NC_000014.9 velvet.60968 100.0 True relocation, scaffold gap is present, inconsistency = 8832 20613488 20615764 285928 288204 NC_000014.9 velvet.60968 99.87 True fake: scaffold gap size wrong estimation (local) 20615970 20617402 288907 290339 NC_000014.9 velvet.60968 99.93 True fake: scaffold gap size wrong estimation (local) 20617655 20619593 291176 293112 NC_000014.9 velvet.60968 99.64 True fake: scaffold gap size wrong estimation (local) 20620397 20621531 294545 295679 NC_000014.9 velvet.60968 99.91 True fake: scaffold gap size wrong estimation (local) 20626947 20633976 295690 302719 NC_000014.9 velvet.60968 99.89 True relocation, scaffold gap is present, inconsistency = 42369912 63003899 63004654 302730 303485 NC_000014.9 velvet.60968 99.87 True fake: scaffold gap size wrong estimation (local) 63004757 63011229 304043 310515 NC_000014.9 velvet.60968 100.0 True relocation, scaffold gap is present, inconsistency = 42158204 20844296 20846338 312758 310730 NC_000014.9 velvet.60968 99.21 True fake: scaffold gap size wrong estimation (local) 20842091 20843325 315790 314556 NC_000014.9 velvet.60968 99.92 True fake: scaffold gap size wrong estimation (local) 20840724 20841754 318541 317511 NC_000014.9 velvet.60968 100.0 True fake: scaffold gap size wrong estimation (local) 20837953 20838470 321205 320688 NC_000014.9 velvet.60968 99.61 True fake: not a misassembly (possible transposable element) 20905204 20906908 321216 322920 NC_000014.9 velvet.60968 99.82 True fake: not a misassembly (possible transposable element) 20834240 20837354 326022 322931 NC_000014.9 velvet.60968 99.1 True relocation, scaffold gap is present, inconsistency = 70093 20907458 20908614 326033 327189 NC_000014.9 velvet.60968 100.0 True relocation, scaffold gap is present, inconsistency = 20614845 41527364 41539339 331094 343299 NC_000014.9 velvet.60968 99.97 True relocation, scaffold gap is present, inconsistency = -20890949 20649828 20650490 344737 345399 NC_000014.9 velvet.60968 100.0 True fake: scaffold gap size wrong estimation (local) 20651421 20653503 347044 349126 NC_000014.9 velvet.60968 99.95 True fake: scaffold gap size wrong estimation (local) 20653536 20654141 349681 350286 NC_000014.9 velvet.60968 100.0 True fake: scaffold gap size wrong estimation (local) 20654822 20657504 351950 354631 NC_000014.9 velvet.60968 99.44 True relocation, scaffold gap is present, inconsistency = 80491367 101148882 101160037 354642 367686 NC_000014.9 velvet.60968 99.66 True relocation, scaffold gap is present, inconsistency = -38127914 63032134 63033977 367697 369540 NC_000014.9 velvet.60968 100.0 True fake: scaffold gap size wrong estimation (local) 63034209 63047146 370569 383506 NC_000014.9 velvet.60968 99.99 True fake: scaffold gap size wrong estimation (local) 63047480 63050420 384628 387568 NC_000014.9 velvet.60968 100.0 True fake: scaffold gap size wrong estimation (local) 63050691 63055271 388593 393173 NC_000014.9 velvet.60968 100.0 True fake: scaffold gap size wrong estimation (local) 63055469 63060992 394069 399753 NC_000014.9 velvet.60968 99.96 True relocation, scaffold gap is present, inconsistency = 14511 63075644 63079364 403614 399894 NC_000014.9 velvet.60968 99.97 True fake: scaffold gap size wrong estimation (local) 63072958 63074815 407033 405176 NC_000014.9 velvet.60968 100.0 True fake: scaffold gap size wrong estimation (local) 63071966 63072632 409023 408357 NC_000014.9 velvet.60968 100.0 True relocation, scaffold gap is present, inconsistency = 9573 63061102 63062382 409034 410312 NC_000014.9 velvet.60968 99.38 True fake: scaffold gap size wrong estimation (local) 63062721 63064561 410871 412714 NC_000014.9 velvet.60968 99.78 True fake: scaffold gap size wrong estimation (local) 63064899 63066312 413855 415275 NC_000014.9 velvet.60968 100.0 True fake: scaffold gap size wrong estimation (local) 63066484 63067092 415377 415985 NC_000014.9 velvet.60968 99.67 True fake: scaffold gap size wrong estimation (local) 63069212 63069916 419196 419900 NC_000014.9 velvet.60968 100.0 True fake: scaffold gap size wrong estimation (local) 63070462 63071240 421670 422448 NC_000014.9 velvet.60968 99.74 True fake: scaffold gap size wrong estimation (extensive) 63079667 63085043 422823 428294 NC_000014.9 velvet.60968 98.61 True fake: scaffold gap size wrong estimation (local) 63085285 63085866 429017 429598 NC_000014.9 velvet.60968 100.0 True fake: scaffold gap size wrong estimation (local) 63086151 63088128 430256 432233 NC_000014.9 velvet.60968 100.0 True fake: scaffold gap size wrong estimation (local) 63088711 63097509 433597 443179 NC_000014.9 velvet.60968 99.85 True fake: scaffold gap size wrong estimation (local) 63097772 63101905 444220 448353 NC_000014.9 velvet.60968 99.98 True fake: scaffold gap size wrong estimation (local) 63102205 63106466 449401 453714 NC_000014.9 velvet.60968 99.32 True relocation, scaffold gap is present, inconsistency = 67135 63024196 63032085 465238 456699 NC_000014.9 velvet.60968 99.87 True fake: not a misassembly (possible transposable element) 63122737 63125111 465859 468353 NC_000014.9 velvet.60968 99.96 True fake: not a misassembly (possible transposable element) 63016063 63023941 476776 468529 NC_000014.9 velvet.60968 99.35 True relocation, scaffold gap is present, inconsistency = 84067 63110424 63114341 479192 483151 NC_000014.9 velvet.60968 98.66 True fake: scaffold gap size wrong estimation (local) 63114578 63116718 484199 486339 NC_000014.9 velvet.60968 99.95 True fake: scaffold gap size wrong estimation (extensive) 63125439 63126655 486351 487567 NC_000014.9 velvet.60968 100.0 True fake: scaffold gap size wrong estimation (local) 63128602 63131139 490194 492731 NC_000014.9 velvet.60968 99.84 True fake: scaffold gap size wrong estimation (local) 63131421 63136329 493759 498766 NC_000014.9 velvet.60968 98.76 True fake: scaffold gap size wrong estimation (local) 63136622 63137770 499953 501101 NC_000014.9 velvet.60968 100.0 True local misassembly 63137967 63139048 501102 502183 NC_000014.9 velvet.60968 99.08 True fake: scaffold gap size wrong estimation (local) 63168307 63173336 529343 534372 NC_000014.9 velvet.60968 99.9 True fake: scaffold gap size wrong estimation (local) 63173643 63184556 535468 546369 NC_000014.9 velvet.60968 99.81 True fake: scaffold gap size wrong estimation (local) 63195949 63196966 556938 557955 NC_000014.9 velvet.60968 100.0 True fake: scaffold gap size wrong estimation (local) 63197261 63198863 559812 561423 NC_000014.9 velvet.60968 98.08 True CONTIG velvet.60968 561955 misassembled 90791531 90792328 798 1 NC_000014.9 velvet.60971 99.62 True fake: scaffold gap size wrong estimation (local) 90764731 90766119 21170 19782 NC_000014.9 velvet.60971 99.57 True fake: scaffold gap size wrong estimation (local) 90758450 90764667 29121 22904 NC_000014.9 velvet.60971 99.9 True relocation, scaffold gap is present, inconsistency = -8573 90766137 90767012 30007 29132 NC_000014.9 velvet.60971 100.0 True inversion, scaffold gap is present 90790326 90791529 48312 49515 NC_000014.9 velvet.60971 99.34 True relocation, scaffold gap is present, inconsistency = 53842 90732696 90734198 53303 51801 NC_000014.9 velvet.60971 100.0 True fake: scaffold gap size wrong estimation (local) 90731222 90732469 55687 54440 NC_000014.9 velvet.60971 100.0 True relocation, scaffold gap is present, inconsistency = -41473 90772008 90772684 56374 55698 NC_000014.9 velvet.60971 99.7 True fake: scaffold gap size wrong estimation (local) 90770655 90771322 57598 56931 NC_000014.9 velvet.60971 100.0 True fake: scaffold gap size wrong estimation (local) 90767032 90769607 62021 59446 NC_000014.9 velvet.60971 99.92 True fake: scaffold gap size wrong estimation (extensive) 90755689 90756363 63618 62944 NC_000014.9 velvet.60971 99.85 True fake: scaffold gap size wrong estimation (local) 90751691 90755427 68401 64666 NC_000014.9 velvet.60971 99.76 True fake: scaffold gap size wrong estimation (local) 90749678 90751457 71279 69500 NC_000014.9 velvet.60971 99.83 True fake: scaffold gap size wrong estimation (local) 90748598 90749388 72437 71647 NC_000014.9 velvet.60971 100.0 True fake: scaffold gap size wrong estimation (local) 90745988 90748343 75787 73432 NC_000014.9 velvet.60971 99.96 True fake: not a misassembly (possible transposable element) 90729945 90730877 77804 76872 NC_000014.9 velvet.60971 99.89 True fake: not a misassembly (possible transposable element) 90735661 90736309 79261 78613 NC_000014.9 velvet.60971 99.85 True fake: scaffold gap size wrong estimation (local) 90714723 90717058 103372 101037 NC_000014.9 velvet.60971 99.87 True fake: scaffold gap size wrong estimation (local) 90713376 90713939 105578 105015 NC_000014.9 velvet.60971 98.23 True local misassembly 90712245 90713175 106509 105579 NC_000014.9 velvet.60971 99.25 True indel: indel (<= 5bp) 90711697 90712244 107061 106514 NC_000014.9 velvet.60971 99.82 True fake: scaffold gap size wrong estimation (local) 90710057 90711441 109586 108202 NC_000014.9 velvet.60971 100.0 True relocation, scaffold gap is present, inconsistency = 17436797 73271874 73272980 110972 109866 NC_000014.9 velvet.60971 100.0 True relocation, scaffold gap is present, inconsistency = -17458121 90720101 90729923 121324 111044 NC_000014.9 velvet.60971 99.94 True fake: scaffold gap size wrong estimation (local) 90719102 90720007 122462 121557 NC_000014.9 velvet.60971 99.89 True fake: scaffold gap size wrong estimation (local) 90717341 90718812 125082 123611 NC_000014.9 velvet.60971 99.86 True relocation, scaffold gap is present, inconsistency = 10593 90736927 90737570 132604 133247 NC_000014.9 velvet.60971 100.0 True fake: scaffold gap size wrong estimation (local) 90738639 90740517 135068 136984 NC_000014.9 velvet.60971 99.95 True fake: scaffold gap size wrong estimation (local) 90740805 90742120 137759 139074 NC_000014.9 velvet.60971 99.92 True fake: scaffold gap size wrong estimation (local) 90742202 90744398 139201 141509 NC_000014.9 velvet.60971 99.91 True fake: scaffold gap size wrong estimation (local) 90744604 90745197 141921 142514 NC_000014.9 velvet.60971 100.0 True relocation, scaffold gap is present, inconsistency = 36344 90706442 90707867 144332 142907 NC_000014.9 velvet.60971 99.93 True fake: scaffold gap size wrong estimation (local) 90701803 90706145 149834 145425 NC_000014.9 velvet.60971 98.37 True fake: scaffold gap size wrong estimation (local) 90695206 90701659 158789 150730 NC_000014.9 velvet.60971 95.23 True fake: scaffold gap size wrong estimation (local) 90688721 90694293 166852 160399 NC_000014.9 velvet.60971 99.67 True fake: scaffold gap size wrong estimation (local) 90682127 90688215 174287 168097 NC_000014.9 velvet.60971 99.95 True relocation, scaffold gap is present, inconsistency = 83825 90780494 90782348 182741 184595 NC_000014.9 velvet.60971 100.0 True fake: scaffold gap size wrong estimation (local) 90782608 90783689 185361 186442 NC_000014.9 velvet.60971 100.0 True relocation, scaffold gap is present, inconsistency = 113080 90668121 90669517 187914 186453 NC_000014.9 velvet.60971 100.0 True fake: scaffold gap size wrong estimation (local) 90663451 90664373 190373 189457 NC_000014.9 velvet.60971 99.24 True fake: not a misassembly (possible transposable element) 90658391 90660130 192681 194420 NC_000014.9 velvet.60971 100.0 True fake: not a misassembly (possible transposable element) 90643848 90658303 209061 194431 NC_000014.9 velvet.60971 99.61 True CONTIG velvet.60971 210427 misassembled 73986072 73988850 30054 27276 NC_000014.9 velvet.60987 99.96 True fake: scaffold gap size wrong estimation (local) 73982750 73983355 31616 31011 NC_000014.9 velvet.60987 100.0 True local misassembly 73984152 73984830 33145 32483 NC_000014.9 velvet.60987 97.64 True fake: scaffold gap size wrong estimation (local) 73977379 73978348 38708 37739 NC_000014.9 velvet.60987 98.97 True indel: indel (> 5bp) 73976840 73977371 39240 38709 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 73975659 73976577 41098 40180 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 73972371 73975403 45823 41782 NC_000014.9 velvet.60987 99.93 True fake: scaffold gap size wrong estimation (local) 73970474 73971162 47589 46909 NC_000014.9 velvet.60987 98.7 True fake: scaffold gap size wrong estimation (extensive) 73949630 73951171 59407 57866 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 73948185 73948831 62005 61359 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 73947380 73947925 62676 62131 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 73946003 73947101 64056 62958 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 73941971 73945488 68952 65435 NC_000014.9 velvet.60987 99.97 True fake: scaffold gap size wrong estimation (local) 73939191 73941100 72618 70709 NC_000014.9 velvet.60987 95.92 True fake: scaffold gap size wrong estimation (local) 73935530 73938204 77332 74658 NC_000014.9 velvet.60987 99.93 True relocation, scaffold gap is present, inconsistency = 24781250 98721123 98729674 79001 87544 NC_000014.9 velvet.60987 99.84 True fake: scaffold gap size wrong estimation (local) 98729960 98739095 88618 97678 NC_000014.9 velvet.60987 99.17 True fake: scaffold gap size wrong estimation (local) 98739206 98740329 98470 99593 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 98740566 98745163 100232 104873 NC_000014.9 velvet.60987 97.54 True fake: scaffold gap size wrong estimation (local) 98745555 98751289 106051 111777 NC_000014.9 velvet.60987 99.83 True relocation, scaffold gap is present, inconsistency = 22672 98711262 98713330 123398 121330 NC_000014.9 velvet.60987 99.95 True fake: scaffold gap size wrong estimation (local) 98708744 98710957 126647 124434 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = 61397 98787531 98791625 141824 145918 NC_000014.9 velvet.60987 99.88 True fake: scaffold gap size wrong estimation (local) 98791647 98793665 146697 148715 NC_000014.9 velvet.60987 99.95 True relocation, scaffold gap is present, inconsistency = 104507 98685209 98687067 150646 148788 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 98678779 98684960 158639 151593 NC_000014.9 velvet.60987 99.8 True fake: scaffold gap size wrong estimation (local) 98676753 98678549 161389 159593 NC_000014.9 velvet.60987 99.72 True relocation, scaffold gap is present, inconsistency = 126699 98805421 98812499 161562 169190 NC_000014.9 velvet.60987 99.91 True fake: scaffold gap size wrong estimation (local) 98812773 98814911 169533 172242 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 98815142 98825234 173226 183318 NC_000014.9 velvet.60987 99.96 True fake: scaffold gap size wrong estimation (local) 98825514 98831475 184375 190336 NC_000014.9 velvet.60987 99.93 True relocation, scaffold gap is present, inconsistency = 160848 98662186 98664655 193293 190347 NC_000014.9 velvet.60987 99.84 True fake: scaffold gap size wrong estimation (local) 98659175 98660705 196941 195464 NC_000014.9 velvet.60987 96.52 True fake: scaffold gap size wrong estimation (local) 98657083 98658992 199870 197961 NC_000014.9 velvet.60987 99.95 True fake: scaffold gap size wrong estimation (local) 98656034 98656990 200954 199998 NC_000014.9 velvet.60987 99.9 True relocation, scaffold gap is present, inconsistency = 188662 98849917 98857411 205219 213557 NC_000014.9 velvet.60987 99.91 True fake: scaffold gap size wrong estimation (local) 98857642 98869700 214550 226608 NC_000014.9 velvet.60987 99.89 True fake: scaffold gap size wrong estimation (local) 98869784 98870940 226747 227902 NC_000014.9 velvet.60987 99.14 True fake: scaffold gap size wrong estimation (local) 98871305 98874428 228891 232078 NC_000014.9 velvet.60987 99.97 True fake: scaffold gap size wrong estimation (local) 98877754 98878870 234182 235297 NC_000014.9 velvet.60987 99.82 True fake: scaffold gap size wrong estimation (local) 98878872 98880322 238349 239799 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 98881732 98882605 241907 242780 NC_000014.9 velvet.60987 99.89 True relocation, scaffold gap is present, inconsistency = -8018 98874598 98877703 242791 245896 NC_000014.9 velvet.60987 99.9 True fake: scaffold gap size wrong estimation (local) 98882913 98887838 245907 250832 NC_000014.9 velvet.60987 99.84 True fake: scaffold gap size wrong estimation (local) 98888029 98895991 251837 259683 NC_000014.9 velvet.60987 97.28 True relocation, scaffold gap is present, inconsistency = -11037 98908279 98918244 283008 293057 NC_000014.9 velvet.60987 99.79 True fake: scaffold gap size wrong estimation (local) 98918882 98920104 294626 295848 NC_000014.9 velvet.60987 99.92 True fake: scaffold gap size wrong estimation (local) 98920402 98921267 295942 296807 NC_000014.9 velvet.60987 99.88 True relocation, scaffold gap is present, inconsistency = -30837 98896300 98905549 302677 312030 NC_000014.9 velvet.60987 98.76 True fake: scaffold gap size wrong estimation (local) 98905814 98908274 313050 315510 NC_000014.9 velvet.60987 99.96 True fake: scaffold gap size wrong estimation (local) 98930113 98942149 336790 349047 NC_000014.9 velvet.60987 99.54 True relocation, scaffold gap is present, inconsistency = -20780 98921380 98923026 349058 350694 NC_000014.9 velvet.60987 99.39 True fake: scaffold gap size wrong estimation (local) 98923659 98924829 351928 353098 NC_000014.9 velvet.60987 99.74 True fake: scaffold gap size wrong estimation (local) 98925421 98926745 354215 355539 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 98927551 98930112 356997 359558 NC_000014.9 velvet.60987 99.92 True fake: scaffold gap size wrong estimation (local) 98946895 98948420 371182 372707 NC_000014.9 velvet.60987 99.93 True fake: scaffold gap size wrong estimation (local) 98948669 98962916 373679 388748 NC_000014.9 velvet.60987 99.87 True fake: scaffold gap size wrong estimation (local) 98963439 98969149 389978 395688 NC_000014.9 velvet.60987 99.93 True relocation, scaffold gap is present, inconsistency = -26990 98942170 98943003 395699 396532 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 98943124 98946875 397569 401320 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = 75897692 23028215 23029585 418537 417167 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 23024602 23026454 422862 421010 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 23020423 23024264 428006 424109 NC_000014.9 velvet.60987 99.92 True fake: scaffold gap size wrong estimation (local) 23018818 23019321 430197 429663 NC_000014.9 velvet.60987 99.77 True fake: scaffold gap size wrong estimation (local) 23017669 23018610 431598 430657 NC_000014.9 velvet.60987 99.79 True relocation, scaffold gap is present, inconsistency = 56215082 79233703 79234318 431609 432224 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = 54315025 24911223 24918445 439679 432457 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = 3843920 21066637 21067292 439690 440345 NC_000014.9 velvet.60987 99.7 True relocation, scaffold gap is present, inconsistency = 44121 21111797 21113958 442941 440729 NC_000014.9 velvet.60987 99.81 True relocation, scaffold gap is present, inconsistency = 74816 21029522 21032386 447536 450400 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = 3865036 24897433 24898409 451387 450411 NC_000014.9 velvet.60987 99.9 True fake: scaffold gap size wrong estimation (local) 24889564 24897124 460050 452492 NC_000014.9 velvet.60987 99.66 True inversion, scaffold gap is present 24882422 24888471 460061 466111 NC_000014.9 velvet.60987 99.87 True fake: scaffold gap size wrong estimation (local) 24888753 24889418 467350 468015 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = 3805483 21077332 21083259 474183 468026 NC_000014.9 velvet.60987 99.88 True fake: scaffold gap size wrong estimation (local) 21070324 21077125 482016 475214 NC_000014.9 velvet.60987 99.88 True fake: scaffold gap size wrong estimation (local) 21068299 21070195 484845 482949 NC_000014.9 velvet.60987 99.89 True fake: scaffold gap size wrong estimation (local) 21065163 21065823 488361 487701 NC_000014.9 velvet.60987 98.49 True fake: scaffold gap size wrong estimation (local) 21062956 21064311 491285 489930 NC_000014.9 velvet.60987 99.93 True fake: scaffold gap size wrong estimation (local) 21059714 21061096 495157 493775 NC_000014.9 velvet.60987 99.71 True relocation, scaffold gap is present, inconsistency = 3858453 24919560 24930825 495168 506431 NC_000014.9 velvet.60987 99.92 True fake: scaffold gap size wrong estimation (local) 24931288 24932154 507425 508328 NC_000014.9 velvet.60987 95.35 True fake: scaffold gap size wrong estimation (local) 24932336 24933146 508551 509363 NC_000014.9 velvet.60987 99.63 True fake: scaffold gap size wrong estimation (local) 24933349 24936656 510254 513561 NC_000014.9 velvet.60987 99.97 True relocation, scaffold gap is present, inconsistency = 51245 24868015 24882093 527689 513572 NC_000014.9 velvet.60987 99.9 True fake: scaffold gap size wrong estimation (local) 24851482 24867930 544982 528535 NC_000014.9 velvet.60987 99.84 True fake: scaffold gap size wrong estimation (local) 24845284 24851222 552206 545985 NC_000014.9 velvet.60987 99.98 True fake: scaffold gap size wrong estimation (local) 24838645 24845014 559648 553279 NC_000014.9 velvet.60987 99.97 True fake: scaffold gap size wrong estimation (local) 24836608 24838399 562339 560599 NC_000014.9 velvet.60987 97.14 True fake: scaffold gap size wrong estimation (local) 24803534 24836326 596916 563511 NC_000014.9 velvet.60987 99.88 True fake: scaffold gap size wrong estimation (local) 24799903 24803258 601349 597938 NC_000014.9 velvet.60987 99.79 True fake: scaffold gap size wrong estimation (local) 24790446 24799797 612001 601971 NC_000014.9 velvet.60987 99.69 True fake: scaffold gap size wrong estimation (local) 24786770 24790297 616429 612902 NC_000014.9 velvet.60987 99.97 True fake: scaffold gap size wrong estimation (local) 24784856 24786769 619742 617829 NC_000014.9 velvet.60987 99.95 True indel: indel (> 5bp) 24782589 24784855 622026 619760 NC_000014.9 velvet.60987 99.91 True fake: scaffold gap size wrong estimation (local) 24779574 24782479 625340 622435 NC_000014.9 velvet.60987 99.93 True indel: indel (> 5bp) 24773970 24779480 631035 625517 NC_000014.9 velvet.60987 99.82 True relocation, scaffold gap is present, inconsistency = 12488336 37270115 37280712 633334 643983 NC_000014.9 velvet.60987 99.84 True fake: scaffold gap size wrong estimation (local) 37280873 37281456 644890 645473 NC_000014.9 velvet.60987 99.83 True fake: scaffold gap size wrong estimation (local) 37281706 37282262 645712 646268 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (extensive) 37299504 37300386 655435 656317 NC_000014.9 velvet.60987 99.66 True relocation, scaffold gap is present, inconsistency = 5290664 42593566 42595035 660302 658833 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = 12277239 30308347 30316316 668282 660313 NC_000014.9 velvet.60987 99.99 True fake: scaffold gap size wrong estimation (local) 30302170 30308062 675249 669357 NC_000014.9 velvet.60987 99.97 True fake: scaffold gap size wrong estimation (local) 30299523 30301845 678710 676344 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = 3276628 33578484 33581618 678721 681931 NC_000014.9 velvet.60987 99.87 True relocation, scaffold gap is present, inconsistency = 31440677 65022666 65023237 682873 682302 NC_000014.9 velvet.60987 98.08 True relocation, scaffold gap is present, inconsistency = 31460676 33558552 33559765 685098 686311 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 33560032 33563535 687174 690747 NC_000014.9 velvet.60987 99.57 True fake: scaffold gap size wrong estimation (local) 33566257 33572772 693960 700475 NC_000014.9 velvet.60987 99.86 True fake: scaffold gap size wrong estimation (local) 33573052 33578237 701527 706712 NC_000014.9 velvet.60987 99.88 True fake: scaffold gap size wrong estimation (local) 33588848 33595723 714040 720915 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 33595921 33605408 721877 731364 NC_000014.9 velvet.60987 100.0 True fake: not a misassembly (possible transposable element) 64991588 64992641 732428 731375 NC_000014.9 velvet.60987 99.91 True fake: not a misassembly (possible transposable element) 33606447 33607419 733180 734152 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 33629267 33633749 754480 759070 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 33633838 33635981 759272 761415 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 33636224 33639980 762452 766208 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 33640225 33643398 767257 770430 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = -37983 33605426 33606149 770441 771164 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = -8586257 25019903 25024054 771175 775326 NC_000014.9 velvet.60987 99.9 True fake: scaffold gap size wrong estimation (local) 25024339 25027606 776433 779700 NC_000014.9 velvet.60987 100.0 True local misassembly 25031742 25034896 779701 782855 NC_000014.9 velvet.60987 99.65 True fake: scaffold gap size wrong estimation (local) 25035185 25035960 783727 784502 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 25061180 25064894 809197 812970 NC_000014.9 velvet.60987 99.95 True inversion, scaffold gap is present 25060090 25061058 813949 812981 NC_000014.9 velvet.60987 99.9 True indel: indel (<= 5bp) 25058491 25060087 815546 813950 NC_000014.9 velvet.60987 99.37 True fake: scaffold gap size wrong estimation (local) 25055693 25058314 819162 816541 NC_000014.9 velvet.60987 99.39 True fake: scaffold gap size wrong estimation (local) 25050495 25055322 825278 820332 NC_000014.9 velvet.60987 99.98 True fake: scaffold gap size wrong estimation (local) 25045883 25049993 830717 826607 NC_000014.9 velvet.60987 99.93 True fake: scaffold gap size wrong estimation (local) 25044172 25045569 832948 831569 NC_000014.9 velvet.60987 98.7 True relocation, scaffold gap is present, inconsistency = -5133979 30176619 30177770 834480 833329 NC_000014.9 velvet.60987 99.91 True relocation, scaffold gap is present, inconsistency = -22192 30194861 30198779 838482 834512 NC_000014.9 velvet.60987 98.44 True fake: not a misassembly (possible transposable element) 33677652 33683063 838519 843983 NC_000014.9 velvet.60987 99.93 True fake: not a misassembly (possible transposable element) 30177792 30191642 857845 843994 NC_000014.9 velvet.60987 99.9 True relocation, scaffold gap is present, inconsistency = 5088052 25088757 25089729 857856 858825 NC_000014.9 velvet.60987 99.49 True fake: not a misassembly (possible transposable element) 86466970 86471070 858836 862936 NC_000014.9 velvet.60987 99.9 True fake: not a misassembly (possible transposable element) 25096061 25097574 862947 864460 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = 5070938 30168523 30173474 869435 864471 NC_000014.9 velvet.60987 99.24 True fake: scaffold gap size wrong estimation (local) 30152857 30168441 885287 869525 NC_000014.9 velvet.60987 99.88 True fake: scaffold gap size wrong estimation (local) 30147739 30152613 891139 886267 NC_000014.9 velvet.60987 99.88 True fake: scaffold gap size wrong estimation (local) 30131558 30136738 908533 902500 NC_000014.9 velvet.60987 99.55 True relocation, scaffold gap is present, inconsistency = 5118090 25012602 25013457 909375 908544 NC_000014.9 velvet.60987 97.16 True fake: scaffold gap size wrong estimation (local) 25002990 25012358 920076 910475 NC_000014.9 velvet.60987 99.98 True fake: scaffold gap size wrong estimation (local) 25000364 25002346 923497 921515 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = 54080075 79082432 79083928 923508 925004 NC_000014.9 velvet.60987 99.47 True fake: scaffold gap size wrong estimation (local) 79084056 79096120 925918 938728 NC_000014.9 velvet.60987 99.79 True fake: scaffold gap size wrong estimation (local) 79096412 79110784 939445 954037 NC_000014.9 velvet.60987 99.85 True relocation, scaffold gap is present, inconsistency = 54115142 24977128 24981259 958179 954048 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = -71147528 96116381 96124521 966649 958314 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 96113999 96115767 969555 967787 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = 71137141 24973627 24976847 972849 969566 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 24968173 24969959 975954 974168 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 24964660 24968054 980324 976860 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = 54147293 79115358 79126199 980335 991272 NC_000014.9 velvet.60987 99.9 True relocation, scaffold gap is present, inconsistency = -24852025 54274185 54276738 991283 993836 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 54277040 54280306 994927 998193 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = 24858005 79138322 79140599 998204 1000481 NC_000014.9 velvet.60987 99.65 True relocation, scaffold gap is present, inconsistency = -8407 79132203 79133662 1000492 1001951 NC_000014.9 velvet.60987 99.59 True fake: scaffold gap size wrong estimation (local) 79133970 79138254 1003092 1007377 NC_000014.9 velvet.60987 99.84 True fake: scaffold gap size wrong estimation (local) 79142457 79149600 1007388 1014530 NC_000014.9 velvet.60987 99.8 True relocation, scaffold gap is present, inconsistency = -9058 79140617 79142246 1014605 1016234 NC_000014.9 velvet.60987 99.88 True relocation, scaffold gap is present, inconsistency = 54194263 24941018 24945132 1021571 1017456 NC_000014.9 velvet.60987 99.85 True relocation, scaffold gap is present, inconsistency = -23636 24963987 24964643 1022238 1021582 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = 29338533 54303187 54311311 1022249 1031174 NC_000014.9 velvet.60987 99.96 True fake: scaffold gap size wrong estimation (local) 54311539 54313054 1032164 1033678 NC_000014.9 velvet.60987 99.8 True relocation, scaffold gap is present, inconsistency = 41815817 96128882 96134785 1039726 1033689 NC_000014.9 velvet.60987 98.64 True relocation, scaffold gap is present, inconsistency = 59372454 36745776 36752458 1043696 1050378 NC_000014.9 velvet.60987 99.91 True fake: scaffold gap size wrong estimation (local) 36752889 36757004 1051516 1055738 NC_000014.9 velvet.60987 99.48 True relocation, scaffold gap is present, inconsistency = 11790956 24951540 24961433 1066131 1056238 NC_000014.9 velvet.60987 99.87 True relocation, scaffold gap is present, inconsistency = 11803205 36764649 36768978 1066142 1070471 NC_000014.9 velvet.60987 99.98 True fake: scaffold gap size wrong estimation (local) 36768994 36770155 1071554 1072715 NC_000014.9 velvet.60987 98.71 True fake: scaffold gap size wrong estimation (local) 36773218 36774629 1072726 1074137 NC_000014.9 velvet.60987 100.0 True local misassembly 36770294 36771766 1074148 1075620 NC_000014.9 velvet.60987 99.93 True fake: scaffold gap size wrong estimation (local) 36774736 36776232 1075631 1077127 NC_000014.9 velvet.60987 100.0 True local misassembly 36776462 36777003 1077128 1077669 NC_000014.9 velvet.60987 97.97 True relocation, scaffold gap is present, inconsistency = 59583948 96360962 96365577 1077680 1082293 NC_000014.9 velvet.60987 99.85 True fake: scaffold gap size wrong estimation (local) 96365833 96368096 1083535 1085798 NC_000014.9 velvet.60987 99.91 True fake: scaffold gap size wrong estimation (local) 96368472 96371466 1086958 1089952 NC_000014.9 velvet.60987 99.93 True fake: scaffold gap size wrong estimation (local) 96371747 96372976 1090828 1092057 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = 227383 96601317 96607792 1099528 1093015 NC_000014.9 velvet.60987 99.25 True fake: scaffold gap size wrong estimation (local) 96598288 96601014 1103362 1100636 NC_000014.9 velvet.60987 99.93 True local misassembly 96597426 96598054 1103991 1103363 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = 59790346 36796417 36805674 1105397 1115409 NC_000014.9 velvet.60987 99.93 True fake: scaffold gap size wrong estimation (local) 36806214 36811393 1116756 1121899 NC_000014.9 velvet.60987 99.17 True fake: scaffold gap size wrong estimation (local) 36811628 36813106 1123122 1124600 NC_000014.9 velvet.60987 99.86 True relocation, scaffold gap is present, inconsistency = 59218338 96031455 96035065 1128221 1124611 NC_000014.9 velvet.60987 99.89 True inversion, scaffold gap is present 96035109 96047944 1128232 1141092 NC_000014.9 velvet.60987 99.66 True relocation, scaffold gap is present, inconsistency = -59230709 36817246 36820514 1141103 1144372 NC_000014.9 velvet.60987 99.79 True fake: scaffold gap size wrong estimation (local) 36821844 36829103 1146447 1153765 NC_000014.9 velvet.60987 99.34 True relocation, scaffold gap is present, inconsistency = 4768754 41597868 41599696 1153776 1155604 NC_000014.9 velvet.60987 99.95 True relocation, scaffold gap is present, inconsistency = 32369007 73968714 73969436 1155615 1156337 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = 9893900 64068864 64071214 1162286 1159937 NC_000014.9 velvet.60987 99.74 True relocation, scaffold gap is present, inconsistency = -13188 64080065 64081858 1164273 1162480 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = 20824989 84906876 84908927 1164302 1166353 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = 33125297 51779485 51781062 1168447 1166870 NC_000014.9 velvet.60987 99.87 True relocation, scaffold gap is present, inconsistency = 40284665 92065869 92066601 1168589 1169321 NC_000014.9 velvet.60987 99.86 True relocation, scaffold gap is present, inconsistency = 3089086 95158983 95159653 1172617 1173287 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = 909060 96069337 96070597 1173911 1175171 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = -4000951 92069670 92070334 1175195 1175859 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = -55241373 36829128 36846435 1176026 1194995 NC_000014.9 velvet.60987 99.84 True fake: scaffold gap size wrong estimation (local) 36846677 36860146 1195974 1209443 NC_000014.9 velvet.60987 99.99 True fake: scaffold gap size wrong estimation (local) 36866216 36867816 1209576 1211176 NC_000014.9 velvet.60987 99.0 True fake: scaffold gap size wrong estimation (local) 36867817 36873349 1211322 1216854 NC_000014.9 velvet.60987 99.49 True relocation, scaffold gap is present, inconsistency = 58315215 95189016 95191420 1217306 1219710 NC_000014.9 velvet.60987 100.0 True local misassembly 95186705 95188994 1219721 1222009 NC_000014.9 velvet.60987 99.96 True fake: scaffold gap size wrong estimation (local) 95192797 95198058 1222020 1227392 NC_000014.9 velvet.60987 99.85 True fake: scaffold gap size wrong estimation (local) 95198383 95198920 1228497 1229034 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = -7493 95191438 95192729 1229045 1230336 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = -58319150 36873590 36876888 1230347 1233646 NC_000014.9 velvet.60987 99.79 True fake: scaffold gap size wrong estimation (local) 36876973 36882126 1234033 1239184 NC_000014.9 velvet.60987 99.71 True fake: scaffold gap size wrong estimation (local) 36882393 36885011 1240265 1242883 NC_000014.9 velvet.60987 99.58 True fake: scaffold gap size wrong estimation (local) 36887593 36888536 1246566 1247509 NC_000014.9 velvet.60987 99.79 True local misassembly 36885365 36887120 1247520 1249275 NC_000014.9 velvet.60987 99.29 True local misassembly 36888507 36892578 1249276 1253563 NC_000014.9 velvet.60987 97.29 True fake: scaffold gap size wrong estimation (local) 36906804 36921910 1270754 1286151 NC_000014.9 velvet.60987 99.76 True relocation, scaffold gap is present, inconsistency = -23243 36898678 36902748 1286162 1290232 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 36922169 36923809 1306238 1307866 NC_000014.9 velvet.60987 99.14 True fake: scaffold gap size wrong estimation (local) 36924687 36925598 1309190 1310101 NC_000014.9 velvet.60987 99.89 True fake: scaffold gap size wrong estimation (local) 36925869 36927069 1310850 1312050 NC_000014.9 velvet.60987 99.92 True fake: scaffold gap size wrong estimation (local) 36927070 36928435 1312115 1313480 NC_000014.9 velvet.60987 95.9 True indel: indel (<= 5bp) 36928437 36931734 1313481 1316778 NC_000014.9 velvet.60987 99.91 True indel: indel (> 5bp) 36931748 36934469 1316779 1319500 NC_000014.9 velvet.60987 99.93 True indel: indel (<= 5bp) 36934725 36935689 1319751 1320715 NC_000014.9 velvet.60987 99.69 True indel: indel (<= 5bp) 36936023 36942158 1321047 1327182 NC_000014.9 velvet.60987 99.85 True local misassembly 36945596 36951249 1327183 1332836 NC_000014.9 velvet.60987 99.81 True fake: scaffold gap size wrong estimation (local) 36951250 36951982 1332908 1333640 NC_000014.9 velvet.60987 97.41 True fake: scaffold gap size wrong estimation (local) 36979581 36980154 1357588 1358161 NC_000014.9 velvet.60987 100.0 True fake: not a misassembly (possible transposable element) 38344353 38345278 1358172 1359097 NC_000014.9 velvet.60987 99.78 True fake: not a misassembly (possible transposable element) 36981863 36982596 1360779 1361512 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 36982711 36984826 1362310 1364425 NC_000014.9 velvet.60987 99.91 True relocation, scaffold gap is present, inconsistency = -23423 36961414 36965877 1364436 1368899 NC_000014.9 velvet.60987 99.87 True indel: indel (> 5bp) 36965916 36969529 1368900 1372513 NC_000014.9 velvet.60987 99.67 True local misassembly 36973054 36977966 1372662 1377574 NC_000014.9 velvet.60987 99.69 True fake: scaffold gap size wrong estimation (local) 36977967 36978941 1377643 1378617 NC_000014.9 velvet.60987 98.77 True relocation, scaffold gap is present, inconsistency = 1366694 38345646 38346513 1378628 1379495 NC_000014.9 velvet.60987 99.42 True local misassembly 38346902 38347571 1379496 1380165 NC_000014.9 velvet.60987 98.36 True fake: scaffold gap size wrong estimation (local) 38348652 38351188 1382206 1384745 NC_000014.9 velvet.60987 99.72 True relocation, scaffold gap is present, inconsistency = -1365838 36985373 36988498 1384768 1387893 NC_000014.9 velvet.60987 99.65 True local misassembly 36988510 36989514 1391063 1392067 NC_000014.9 velvet.60987 99.0 True fake: scaffold gap size wrong estimation (local) 36990115 36990686 1393126 1393697 NC_000014.9 velvet.60987 95.45 True fake: scaffold gap size wrong estimation (local) 36990896 36997578 1394877 1401559 NC_000014.9 velvet.60987 99.13 True relocation, scaffold gap is present, inconsistency = 1364349 38362522 38363752 1403384 1402154 NC_000014.9 velvet.60987 99.76 True relocation, scaffold gap is present, inconsistency = 8744490 47110198 47112628 1405340 1407770 NC_000014.9 velvet.60987 99.96 True relocation, scaffold gap is present, inconsistency = -10103129 37034309 37036511 1432580 1434782 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 37036708 37039941 1435750 1439058 NC_000014.9 velvet.60987 99.56 True fake: scaffold gap size wrong estimation (local) 37041796 37043850 1440769 1442823 NC_000014.9 velvet.60987 99.66 True fake: scaffold gap size wrong estimation (local) 37043978 37049390 1443802 1449365 NC_000014.9 velvet.60987 99.89 True fake: scaffold gap size wrong estimation (local) 37049432 37055927 1450448 1458188 NC_000014.9 velvet.60987 99.34 True fake: scaffold gap size wrong estimation (local) 37056521 37060307 1459272 1463586 NC_000014.9 velvet.60987 99.92 True fake: not a misassembly (possible transposable element) 38413856 38415222 1463597 1464926 NC_000014.9 velvet.60987 96.11 True fake: not a misassembly (possible transposable element) 37060431 37063200 1467274 1470043 NC_000014.9 velvet.60987 99.96 True fake: scaffold gap size wrong estimation (local) 37063472 37068917 1471107 1476552 NC_000014.9 velvet.60987 99.94 True fake: scaffold gap size wrong estimation (local) 37069193 37071934 1477594 1480335 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 37072210 37074576 1481276 1483809 NC_000014.9 velvet.60987 99.57 True fake: scaffold gap size wrong estimation (local) 37095660 37097041 1503092 1504469 NC_000014.9 velvet.60987 99.57 True fake: scaffold gap size wrong estimation (local) 37099095 37100056 1506781 1507742 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 37100362 37102187 1508397 1510222 NC_000014.9 velvet.60987 99.95 True relocation, scaffold gap is present, inconsistency = -10731 37091467 37095324 1510233 1514154 NC_000014.9 velvet.60987 99.9 True relocation, scaffold gap is present, inconsistency = 84669 37186601 37187553 1521714 1520762 NC_000014.9 velvet.60987 100.0 True local misassembly 37187737 37188365 1522335 1521725 NC_000014.9 velvet.60987 95.49 True relocation, scaffold gap is present, inconsistency = 36585312 73777100 73778100 1525758 1526758 NC_000014.9 velvet.60987 99.9 True fake: scaffold gap size wrong estimation (local) 73780178 73780946 1529451 1530219 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = 36555362 37216064 37218181 1538976 1536854 NC_000014.9 velvet.60987 99.91 True fake: scaffold gap size wrong estimation (extensive) 37183766 37184341 1563429 1562854 NC_000014.9 velvet.60987 100.0 True local misassembly 37185506 37186363 1564297 1563440 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 37182816 37183519 1567735 1567032 NC_000014.9 velvet.60987 98.44 True local misassembly 37181736 37182483 1568483 1567736 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 37179741 37180873 1571498 1570366 NC_000014.9 velvet.60987 98.94 True fake: scaffold gap size wrong estimation (local) 37171140 37176398 1580866 1575642 NC_000014.9 velvet.60987 99.09 True fake: scaffold gap size wrong estimation (local) 37165378 37170043 1587509 1582786 NC_000014.9 velvet.60987 99.91 True relocation, scaffold gap is present, inconsistency = 3294288 33870320 33871079 1588279 1587520 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 33868688 33870032 1591179 1589835 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = 39944487 73816401 73817688 1593061 1594348 NC_000014.9 velvet.60987 99.92 True relocation, scaffold gap is present, inconsistency = 36655746 37159996 37160644 1595007 1594359 NC_000014.9 velvet.60987 99.85 True relocation, scaffold gap is present, inconsistency = 36646984 73809261 73810149 1596640 1597528 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 73810626 73811828 1598477 1599679 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 73812090 73812642 1599999 1600551 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 73812918 73813443 1601736 1602261 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = 16775 73836614 73837342 1608657 1609385 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 73838838 73839487 1611790 1612439 NC_000014.9 velvet.60987 98.46 True fake: scaffold gap size wrong estimation (local) 73841067 73842025 1614989 1615947 NC_000014.9 velvet.60987 99.9 True local misassembly 73842186 73842809 1615948 1616571 NC_000014.9 velvet.60987 98.4 True fake: scaffold gap size wrong estimation (extensive) 73846721 73847248 1628588 1629115 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 73850008 73850550 1633375 1633917 NC_000014.9 velvet.60987 100.0 True local misassembly 73850745 73851982 1633918 1635155 NC_000014.9 velvet.60987 99.19 True fake: scaffold gap size wrong estimation (local) 73854396 73855481 1638330 1639415 NC_000014.9 velvet.60987 99.08 True relocation, scaffold gap is present, inconsistency = 14745 73870750 73871341 1639939 1640530 NC_000014.9 velvet.60987 98.31 True indel: indel (<= 5bp) 73871343 73872710 1640531 1641898 NC_000014.9 velvet.60987 99.27 True fake: scaffold gap size wrong estimation (local) 73873744 73874921 1643917 1645121 NC_000014.9 velvet.60987 100.0 True relocation, scaffold gap is present, inconsistency = 36732781 37137271 37140813 1648813 1645271 NC_000014.9 velvet.60987 99.92 True fake: scaffold gap size wrong estimation (local) 37106901 37113619 1678016 1671223 NC_000014.9 velvet.60987 99.1 True fake: scaffold gap size wrong estimation (local) 37102991 37105989 1682959 1679961 NC_000014.9 velvet.60987 99.9 True relocation, scaffold gap is present, inconsistency = -5748886 42850864 42851866 1683972 1682970 NC_000014.9 velvet.60987 100.0 True fake: not a misassembly (possible transposable element) 80516123 80517689 1685549 1683983 NC_000014.9 velvet.60987 100.0 True fake: not a misassembly (possible transposable element) 42846241 42849870 1690796 1687167 NC_000014.9 velvet.60987 99.89 True relocation, scaffold gap is present, inconsistency = 5728128 37113883 37117863 1691046 1695026 NC_000014.9 velvet.60987 99.92 True relocation, scaffold gap is present, inconsistency = 3194423 33914387 33919449 1700099 1695037 NC_000014.9 velvet.60987 99.98 True fake: scaffold gap size wrong estimation (local) 33905770 33913343 1709619 1702046 NC_000014.9 velvet.60987 99.99 True relocation, scaffold gap is present, inconsistency = 3211402 37124756 37128808 1709630 1713743 NC_000014.9 velvet.60987 99.93 True fake: scaffold gap size wrong estimation (local) 37130153 37132736 1715822 1718405 NC_000014.9 velvet.60987 99.88 True relocation, scaffold gap is present, inconsistency = -14714 37118033 37119079 1718416 1719471 NC_000014.9 velvet.60987 99.62 True fake: scaffold gap size wrong estimation (local) 37119520 37121559 1720468 1722510 NC_000014.9 velvet.60987 99.61 True fake: scaffold gap size wrong estimation (local) 37121771 37124754 1723510 1726571 NC_000014.9 velvet.60987 99.76 True fake: scaffold gap size wrong estimation (local) 37133177 37134554 1738761 1740138 NC_000014.9 velvet.60987 99.85 True relocation, scaffold gap is present, inconsistency = 12839 37161043 37161686 1753788 1754431 NC_000014.9 velvet.60987 100.0 True fake: scaffold gap size wrong estimation (local) 37163327 37165121 1757048 1758842 NC_000014.9 velvet.60987 99.94 True relocation, scaffold gap is present, inconsistency = -9880 37155252 37155966 1758853 1759567 NC_000014.9 velvet.60987 99.72 True local misassembly 37156173 37157109 1759568 1760504 NC_000014.9 velvet.60987 97.87 True local misassembly 37157407 37158742 1760505 1761840 NC_000014.9 velvet.60987 99.1 True CONTIG velvet.60987 1763719 misassembled CONTIG velvet.60992 228 unaligned 26854947 26858754 4032 226 NC_000014.9 velvet.61002 99.97 True relocation, scaffold gap is present, inconsistency = -38458252 65311516 65313185 5715 4046 NC_000014.9 velvet.61002 99.94 True fake: scaffold gap size wrong estimation (local) 65309619 65311243 8328 6696 NC_000014.9 velvet.61002 99.88 True fake: scaffold gap size wrong estimation (local) 65306410 65307810 12335 10935 NC_000014.9 velvet.61002 100.0 True fake: scaffold gap size wrong estimation (local) 65304888 65305713 14636 13811 NC_000014.9 velvet.61002 100.0 True fake: scaffold gap size wrong estimation (local) 65279191 65280344 37840 36687 NC_000014.9 velvet.61002 100.0 True fake: scaffold gap size wrong estimation (local) 65276313 65278923 41587 38933 NC_000014.9 velvet.61002 100.0 True fake: scaffold gap size wrong estimation (local) 65275069 65276023 43620 42666 NC_000014.9 velvet.61002 100.0 True fake: scaffold gap size wrong estimation (local) 65273853 65274800 44899 43952 NC_000014.9 velvet.61002 100.0 True fake: scaffold gap size wrong estimation (local) 65270364 65272341 49069 47092 NC_000014.9 velvet.61002 100.0 True fake: scaffold gap size wrong estimation (local) 65267679 65270135 52653 50202 NC_000014.9 velvet.61002 99.72 True relocation, scaffold gap is present, inconsistency = -12336928 77602848 77604596 54412 52664 NC_000014.9 velvet.61002 99.89 True relocation, scaffold gap is present, inconsistency = 15310309 92914916 92919796 54423 59302 NC_000014.9 velvet.61002 99.92 True fake: scaffold gap size wrong estimation (local) 92920693 92921400 60771 61478 NC_000014.9 velvet.61002 99.86 True fake: scaffold gap size wrong estimation (local) 92921673 92932166 62149 72562 NC_000014.9 velvet.61002 99.14 True relocation, scaffold gap is present, inconsistency = -24013414 68918763 68933190 72573 88520 NC_000014.9 velvet.61002 95.92 True relocation, scaffold gap is present, inconsistency = 23979547 92912748 92913500 88531 89283 NC_000014.9 velvet.61002 100.0 True fake: scaffold gap size wrong estimation (extensive) 92932195 92937983 98131 103919 NC_000014.9 velvet.61002 99.95 True fake: scaffold gap size wrong estimation (local) 92938231 92948409 105424 115602 NC_000014.9 velvet.61002 99.86 True relocation, scaffold gap is present, inconsistency = 31753229 61182216 61184991 118430 115613 NC_000014.9 velvet.61002 99.93 True fake: scaffold gap size wrong estimation (local) 61178935 61180860 122582 120663 NC_000014.9 velvet.61002 99.58 True fake: scaffold gap size wrong estimation (local) 61176119 61177018 126083 125184 NC_000014.9 velvet.61002 99.89 True relocation, scaffold gap is present, inconsistency = 31793578 92972890 92974807 128377 130294 NC_000014.9 velvet.61002 99.95 True fake: scaffold gap size wrong estimation (extensive) 92980074 92980703 145478 146107 NC_000014.9 velvet.61002 100.0 True local misassembly 92978513 92979050 146118 146655 NC_000014.9 velvet.61002 99.26 True fake: scaffold gap size wrong estimation (local) 92983851 92996341 149421 162713 NC_000014.9 velvet.61002 99.93 True relocation, scaffold gap is present, inconsistency = -19374204 73629120 73629661 169696 170237 NC_000014.9 velvet.61002 99.63 True fake: scaffold gap size wrong estimation (local) 73631491 73632591 172936 174005 NC_000014.9 velvet.61002 97.07 True inversion, scaffold gap is present 73629913 73631306 177423 176030 NC_000014.9 velvet.61002 100.0 True inversion, scaffold gap is present 73651282 73651834 201033 201586 NC_000014.9 velvet.61002 99.28 True fake: scaffold gap size wrong estimation (local) 73653643 73654495 204262 205114 NC_000014.9 velvet.61002 100.0 True fake: scaffold gap size wrong estimation (local) 73655627 73656463 206159 206995 NC_000014.9 velvet.61002 98.81 True relocation, scaffold gap is present, inconsistency = -4710898 68948559 68950002 209989 211432 NC_000014.9 velvet.61002 99.52 True fake: scaffold gap size wrong estimation (local) 68950861 68952362 213246 214747 NC_000014.9 velvet.61002 99.93 True relocation, scaffold gap is present, inconsistency = -19945 68933998 68935064 216328 217394 NC_000014.9 velvet.61002 100.0 True fake: scaffold gap size wrong estimation (local) 68935688 68940610 219541 224546 NC_000014.9 velvet.61002 99.98 True fake: scaffold gap size wrong estimation (local) 68960964 68965972 244700 249708 NC_000014.9 velvet.61002 99.86 True relocation, scaffold gap is present, inconsistency = 24004931 92970914 92972599 251404 249719 NC_000014.9 velvet.61002 99.7 True inversion, scaffold gap is present 92966292 92968086 252163 253962 NC_000014.9 velvet.61002 99.67 True fake: scaffold gap size wrong estimation (local) 92974839 92977540 253973 256714 NC_000014.9 velvet.61002 98.14 True relocation, scaffold gap is present, inconsistency = -9494 92968342 92970651 257010 259319 NC_000014.9 velvet.61002 99.91 True relocation, scaffold gap is present, inconsistency = -24018268 68952394 68953626 259330 260562 NC_000014.9 velvet.61002 99.92 True fake: scaffold gap size wrong estimation (local) 68960052 68960711 265627 266286 NC_000014.9 velvet.61002 100.0 True fake: scaffold gap size wrong estimation (local) 68966229 68973272 268401 275707 NC_000014.9 velvet.61002 99.86 True fake: scaffold gap size wrong estimation (local) 68973585 68974338 276434 277187 NC_000014.9 velvet.61002 99.73 True fake: scaffold gap size wrong estimation (local) 68974576 68977809 280210 283443 NC_000014.9 velvet.61002 99.66 True relocation, scaffold gap is present, inconsistency = 8017763 77013770 77014928 301641 302799 NC_000014.9 velvet.61002 99.83 True fake: scaffold gap size wrong estimation (local) 77017435 77018182 306261 307008 NC_000014.9 velvet.61002 99.87 True fake: not a misassembly (possible transposable element) 69012331 69013266 310652 311587 NC_000014.9 velvet.61002 100.0 True fake: not a misassembly (possible transposable element) 77021608 77022238 311598 312228 NC_000014.9 velvet.61002 99.84 True relocation, scaffold gap is present, inconsistency = -8009235 69013593 69015461 312818 314686 NC_000014.9 velvet.61002 99.84 True fake: scaffold gap size wrong estimation (local) 69016051 69016934 315874 316757 NC_000014.9 velvet.61002 99.77 True relocation, scaffold gap is present, inconsistency = -14108 69002837 69007524 316768 321455 NC_000014.9 velvet.61002 99.91 True relocation, scaffold gap is present, inconsistency = 3188850 72200979 72202859 327940 326060 NC_000014.9 velvet.61002 99.95 True fake: scaffold gap size wrong estimation (local) 72197340 72200584 332393 329149 NC_000014.9 velvet.61002 99.88 True relocation, scaffold gap is present, inconsistency = 3174738 69021584 69022251 332744 333411 NC_000014.9 velvet.61002 99.85 True fake: scaffold gap size wrong estimation (local) 69022797 69023441 334075 334719 NC_000014.9 velvet.61002 99.84 True fake: scaffold gap size wrong estimation (local) 69023670 69024587 335658 336575 NC_000014.9 velvet.61002 100.0 True local misassembly 69024857 69025942 336576 337661 NC_000014.9 velvet.61002 98.8 True fake: scaffold gap size wrong estimation (local) 69026074 69027949 338808 340683 NC_000014.9 velvet.61002 99.95 True fake: scaffold gap size wrong estimation (local) 69028738 69029281 342438 342981 NC_000014.9 velvet.61002 100.0 True fake: scaffold gap size wrong estimation (local) 69029864 69030717 343564 344417 NC_000014.9 velvet.61002 99.88 True fake: scaffold gap size wrong estimation (local) 69030942 69031580 345300 345961 NC_000014.9 velvet.61002 96.53 True fake: scaffold gap size wrong estimation (local) 69034034 69035577 349111 350654 NC_000014.9 velvet.61002 99.81 True relocation, scaffold gap is present, inconsistency = 3156456 72193239 72194919 353538 351860 NC_000014.9 velvet.61002 99.76 True fake: scaffold gap size wrong estimation (local) 72185258 72188471 356760 353549 NC_000014.9 velvet.61002 99.88 True relocation, scaffold gap is present, inconsistency = -7717 72191535 72192964 358200 356771 NC_000014.9 velvet.61002 99.86 True inversion, scaffold gap is present 72182441 72184383 358883 360825 NC_000014.9 velvet.61002 99.9 True relocation, scaffold gap is present, inconsistency = 10778 72195233 72197109 360897 362773 NC_000014.9 velvet.61002 99.89 True relocation, scaffold gap is present, inconsistency = 12866 72174355 72182124 370785 363016 NC_000014.9 velvet.61002 99.9 True fake: scaffold gap size wrong estimation (local) 72163885 72174124 382099 371845 NC_000014.9 velvet.61002 99.77 True relocation, scaffold gap is present, inconsistency = 41349215 30813504 30814250 382519 383265 NC_000014.9 velvet.61002 100.0 True local misassembly 30810311 30812913 383276 385883 NC_000014.9 velvet.61002 99.88 True fake: scaffold gap size wrong estimation (local) 30815089 30816175 386067 387153 NC_000014.9 velvet.61002 99.72 True local misassembly 30814282 30814809 387930 388457 NC_000014.9 velvet.61002 99.81 True relocation, scaffold gap is present, inconsistency = 41319710 72145753 72147845 401783 399691 NC_000014.9 velvet.61002 99.9 True fake: scaffold gap size wrong estimation (local) 72132539 72136621 410298 406157 NC_000014.9 velvet.61002 99.98 True relocation, scaffold gap is present, inconsistency = 41283874 30845229 30847604 411359 413701 NC_000014.9 velvet.61002 98.33 True fake: scaffold gap size wrong estimation (local) 30878636 30880771 442623 444780 NC_000014.9 velvet.61002 98.19 True relocation, scaffold gap is present, inconsistency = 15384988 46267469 46274780 446490 453801 NC_000014.9 velvet.61002 99.81 True fake: scaffold gap size wrong estimation (local) 46279246 46280757 453812 455351 NC_000014.9 velvet.61002 96.46 True fake: not a misassembly (possible transposable element) 46249648 46252763 455362 458477 NC_000014.9 velvet.61002 99.9 True fake: not a misassembly (possible transposable element) 46291230 46295623 469288 473734 NC_000014.9 velvet.61002 99.73 True fake: scaffold gap size wrong estimation (local) 46295953 46296707 474616 475370 NC_000014.9 velvet.61002 99.21 True local misassembly 46296708 46297528 475740 476560 NC_000014.9 velvet.61002 98.78 True fake: scaffold gap size wrong estimation (local) 46297952 46316557 477587 497420 NC_000014.9 velvet.61002 99.86 True fake: scaffold gap size wrong estimation (local) 46316919 46320889 498487 502915 NC_000014.9 velvet.61002 99.9 True fake: scaffold gap size wrong estimation (local) 46321232 46337095 504022 520691 NC_000014.9 velvet.61002 99.86 True fake: scaffold gap size wrong estimation (local) 46337339 46346627 521642 531664 NC_000014.9 velvet.61002 99.94 True fake: scaffold gap size wrong estimation (local) 46346798 46351557 532559 537369 NC_000014.9 velvet.61002 99.56 True relocation, scaffold gap is present, inconsistency = 5592739 40748983 40753381 542584 538047 NC_000014.9 velvet.61002 99.07 True fake: scaffold gap size wrong estimation (local) 40737595 40748707 554740 543620 NC_000014.9 velvet.61002 99.78 True fake: not a misassembly (possible transposable element) 46361434 46366263 557152 562142 NC_000014.9 velvet.61002 99.33 True fake: not a misassembly (possible transposable element) 40732810 40733387 562730 562153 NC_000014.9 velvet.61002 99.83 True fake: scaffold gap size wrong estimation (local) 40730889 40732355 567324 565858 NC_000014.9 velvet.61002 99.8 True fake: scaffold gap size wrong estimation (local) 40726727 40728686 571866 569903 NC_000014.9 velvet.61002 99.85 True fake: scaffold gap size wrong estimation (local) 40725649 40726363 573770 573056 NC_000014.9 velvet.61002 100.0 True inversion, scaffold gap is present 40723864 40725543 574148 575827 NC_000014.9 velvet.61002 99.76 True relocation, scaffold gap is present, inconsistency = 7520771 48253328 48255204 584717 582841 NC_000014.9 velvet.61002 99.47 True fake: scaffold gap size wrong estimation (local) 48246552 48253004 592238 585786 NC_000014.9 velvet.61002 99.98 True fake: scaffold gap size wrong estimation (local) 48243611 48246245 595972 593338 NC_000014.9 velvet.61002 100.0 True relocation, scaffold gap is present, inconsistency = 7531547 40711468 40712053 596568 595983 NC_000014.9 velvet.61002 100.0 True fake: scaffold gap size wrong estimation (local) 40703951 40710411 604882 598379 NC_000014.9 velvet.61002 99.88 True fake: scaffold gap size wrong estimation (local) 40702310 40703691 606903 605522 NC_000014.9 velvet.61002 99.86 True fake: scaffold gap size wrong estimation (local) 40695123 40702278 614768 607589 NC_000014.9 velvet.61002 99.17 True fake: scaffold gap size wrong estimation (local) 40692044 40692628 618676 618092 NC_000014.9 velvet.61002 100.0 True local misassembly 40692659 40694379 620407 618687 NC_000014.9 velvet.61002 99.71 True fake: not a misassembly (possible transposable element) 83985946 83990337 620446 624837 NC_000014.9 velvet.61002 99.84 True fake: not a misassembly (possible transposable element) 40677378 40678817 630417 628978 NC_000014.9 velvet.61002 99.93 True relocation, scaffold gap is present, inconsistency = 43311745 83990589 83996774 630444 637442 NC_000014.9 velvet.61002 98.34 True fake: scaffold gap size wrong estimation (local) 83997077 83998481 638088 639500 NC_000014.9 velvet.61002 99.15 True relocation, scaffold gap is present, inconsistency = 43319837 40658537 40676912 658441 639828 NC_000014.9 velvet.61002 99.66 True fake: scaffold gap size wrong estimation (local) 40653288 40658055 664365 659655 NC_000014.9 velvet.61002 98.7 True fake: scaffold gap size wrong estimation (local) 40641563 40653170 678084 664829 NC_000014.9 velvet.61002 99.73 True fake: scaffold gap size wrong estimation (local) 40640674 40641279 679803 679198 NC_000014.9 velvet.61002 99.83 True fake: scaffold gap size wrong estimation (local) 40636145 40639848 684802 681099 NC_000014.9 velvet.61002 99.89 True fake: scaffold gap size wrong estimation (local) 40631317 40632558 686054 684813 NC_000014.9 velvet.61002 99.76 True relocation, scaffold gap is present, inconsistency = 43397712 84031386 84036121 687170 692619 NC_000014.9 velvet.61002 99.94 True fake: scaffold gap size wrong estimation (local) 84036364 84039260 693325 696612 NC_000014.9 velvet.61002 99.54 True CONTIG velvet.61002 696969 misassembled CONTIG velvet.61026 211 unaligned 82019998 82021750 2005 219 NC_000014.9 velvet.61040 99.34 True fake: scaffold gap size wrong estimation (local) 82017459 82019712 5309 3056 NC_000014.9 velvet.61040 99.96 True fake: scaffold gap size wrong estimation (local) 82004688 82017186 19704 6398 NC_000014.9 velvet.61040 99.74 True relocation, scaffold gap is present, inconsistency = 11407 81990742 81992267 20718 22243 NC_000014.9 velvet.61040 99.87 True fake: scaffold gap size wrong estimation (local) 81994683 81995298 23350 23965 NC_000014.9 velvet.61040 99.68 True local misassembly 81992538 81994616 23976 26115 NC_000014.9 velvet.61040 96.92 True fake: not a misassembly (possible transposable element) 82001003 82003987 31103 28119 NC_000014.9 velvet.61040 99.83 True fake: not a misassembly (possible transposable element) 82028961 82030526 57422 58987 NC_000014.9 velvet.61040 99.87 True relocation, scaffold gap is present, inconsistency = 38261 81983540 81990689 66145 58998 NC_000014.9 velvet.61040 99.78 True fake: scaffold gap size wrong estimation (local) 81978998 81983328 71477 67147 NC_000014.9 velvet.61040 99.95 True fake: scaffold gap size wrong estimation (local) 81961995 81978790 89303 72545 NC_000014.9 velvet.61040 99.78 True fake: scaffold gap size wrong estimation (local) 81959146 81961721 92963 90312 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 81948798 81959048 104190 93154 NC_000014.9 velvet.61040 99.86 True fake: scaffold gap size wrong estimation (local) 81946120 81948550 107644 105214 NC_000014.9 velvet.61040 99.96 True fake: scaffold gap size wrong estimation (local) 81931390 81944820 123937 109741 NC_000014.9 velvet.61040 99.78 True fake: scaffold gap size wrong estimation (local) 81916112 81918882 133311 130541 NC_000014.9 velvet.61040 99.86 True relocation, scaffold gap is present, inconsistency = -15085 81927875 81931186 137224 133322 NC_000014.9 velvet.61040 99.97 True fake: scaffold gap size wrong estimation (local) 81926984 81927799 138050 137235 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 81924091 81926697 141387 138781 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 81918884 81923058 147368 143194 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 81914660 81915790 148509 147379 NC_000014.9 velvet.61040 99.73 True indel: indel (> 5bp) 81913496 81914659 149680 148517 NC_000014.9 velvet.61040 99.14 True fake: scaffold gap size wrong estimation (local) 81909026 81912917 154825 150588 NC_000014.9 velvet.61040 98.01 True fake: scaffold gap size wrong estimation (local) 81900691 81908752 163620 155478 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 81898115 81900406 167005 164714 NC_000014.9 velvet.61040 99.87 True fake: scaffold gap size wrong estimation (local) 81896344 81897809 169642 168177 NC_000014.9 velvet.61040 99.93 True fake: scaffold gap size wrong estimation (local) 81894866 81896260 171163 169765 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 81893961 81894586 172809 172184 NC_000014.9 velvet.61040 99.68 True indel: indel (> 5bp) 81892193 81893943 174647 172897 NC_000014.9 velvet.61040 97.09 True fake: scaffold gap size wrong estimation (local) 81887927 81890428 179623 177141 NC_000014.9 velvet.61040 99.24 True fake: scaffold gap size wrong estimation (local) 81883538 81887667 184829 180700 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 81882200 81883295 186713 185618 NC_000014.9 velvet.61040 99.82 True fake: scaffold gap size wrong estimation (local) 81877079 81882096 192325 187308 NC_000014.9 velvet.61040 99.98 True fake: scaffold gap size wrong estimation (local) 81875939 81876834 194059 193164 NC_000014.9 velvet.61040 99.78 True fake: scaffold gap size wrong estimation (extensive) 81858026 81859497 203809 202264 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 81854792 81857782 207782 204811 NC_000014.9 velvet.61040 99.33 True relocation, scaffold gap is present, inconsistency = -20801 81870822 81875582 212515 207793 NC_000014.9 velvet.61040 99.03 True fake: scaffold gap size wrong estimation (local) 81867965 81870586 216184 213563 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 81866178 81867671 218719 217226 NC_000014.9 velvet.61040 99.93 True fake: scaffold gap size wrong estimation (local) 81865137 81865911 220041 219267 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (extensive) 81845985 81851764 230807 224996 NC_000014.9 velvet.61040 98.31 True relocation, scaffold gap is present, inconsistency = 21725 81823263 81824249 230818 231835 NC_000014.9 velvet.61040 96.56 True relocation, scaffold gap is present, inconsistency = 7006 81843387 81845703 246283 243967 NC_000014.9 velvet.61040 99.74 True fake: scaffold gap size wrong estimation (local) 81837392 81843190 253136 247323 NC_000014.9 velvet.61040 99.31 True fake: scaffold gap size wrong estimation (local) 81836051 81836680 254393 253764 NC_000014.9 velvet.61040 100.0 True relocation, scaffold gap is present, inconsistency = -18736 81853490 81854776 255632 254404 NC_000014.9 velvet.61040 95.22 True fake: scaffold gap size wrong estimation (local) 81851945 81852630 259046 258361 NC_000014.9 velvet.61040 100.0 True relocation, scaffold gap is present, inconsistency = 16054 81834996 81835880 259941 259057 NC_000014.9 velvet.61040 99.77 True fake: scaffold gap size wrong estimation (local) 81829977 81834771 268024 263257 NC_000014.9 velvet.61040 99.37 True fake: scaffold gap size wrong estimation (local) 81827073 81828452 271735 270355 NC_000014.9 velvet.61040 99.78 True fake: scaffold gap size wrong estimation (local) 81793876 81795506 299743 298113 NC_000014.9 velvet.61040 99.69 True relocation, scaffold gap is present, inconsistency = -59622 81852651 81853487 300590 299754 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 81824242 81826970 330805 328092 NC_000014.9 velvet.61040 99.34 True fake: scaffold gap size wrong estimation (local) 81821386 81823172 334458 332651 NC_000014.9 velvet.61040 98.62 True fake: scaffold gap size wrong estimation (local) 81815725 81821077 340695 335405 NC_000014.9 velvet.61040 98.73 True fake: scaffold gap size wrong estimation (local) 81811395 81815447 345781 341729 NC_000014.9 velvet.61040 99.9 True fake: scaffold gap size wrong estimation (local) 81808245 81811224 349682 346703 NC_000014.9 velvet.61040 99.9 True fake: scaffold gap size wrong estimation (local) 81800987 81807932 357720 350775 NC_000014.9 velvet.61040 99.94 True fake: scaffold gap size wrong estimation (local) 81790799 81793266 361563 359081 NC_000014.9 velvet.61040 98.91 True relocation, scaffold gap is present, inconsistency = -9907 81799786 81800695 362443 361574 NC_000014.9 velvet.61040 95.27 True indel: indel (<= 5bp) 81798395 81799703 363865 362522 NC_000014.9 velvet.61040 96.95 True fake: scaffold gap size wrong estimation (local) 81795768 81798172 367337 364933 NC_000014.9 velvet.61040 99.92 True fake: scaffold gap size wrong estimation (local) 81788479 81789919 368942 367514 NC_000014.9 velvet.61040 98.27 True local misassembly 81789926 81790679 370850 370089 NC_000014.9 velvet.61040 98.27 True fake: scaffold gap size wrong estimation (local) 81787134 81788104 374504 373546 NC_000014.9 velvet.61040 98.76 True fake: scaffold gap size wrong estimation (local) 81784276 81786608 378470 376138 NC_000014.9 velvet.61040 99.87 True fake: scaffold gap size wrong estimation (local) 81780738 81783983 382738 379520 NC_000014.9 velvet.61040 99.16 True fake: scaffold gap size wrong estimation (local) 81776244 81780470 388431 384185 NC_000014.9 velvet.61040 98.66 True fake: scaffold gap size wrong estimation (local) 81769707 81775982 395598 389265 NC_000014.9 velvet.61040 99.84 True fake: scaffold gap size wrong estimation (local) 81767163 81769611 398218 395778 NC_000014.9 velvet.61040 99.55 True fake: scaffold gap size wrong estimation (local) 81763865 81767080 402265 399050 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 81758783 81763651 408095 403227 NC_000014.9 velvet.61040 99.86 True fake: scaffold gap size wrong estimation (local) 81756403 81758507 411225 409124 NC_000014.9 velvet.61040 99.67 True fake: scaffold gap size wrong estimation (local) 81744533 81756282 423947 411944 NC_000014.9 velvet.61040 99.95 True fake: scaffold gap size wrong estimation (local) 81741648 81744271 427572 424949 NC_000014.9 velvet.61040 99.92 True fake: scaffold gap size wrong estimation (local) 81734429 81741366 435582 428645 NC_000014.9 velvet.61040 99.99 True fake: scaffold gap size wrong estimation (extensive) 81730474 81733925 448071 444259 NC_000014.9 velvet.61040 98.13 True fake: scaffold gap size wrong estimation (local) 81719731 81730191 461120 449127 NC_000014.9 velvet.61040 99.92 True fake: scaffold gap size wrong estimation (local) 81707834 81711634 466132 462332 NC_000014.9 velvet.61040 99.92 True fake: scaffold gap size wrong estimation (local) 81694222 81694922 482851 482151 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 81690363 81693942 487229 483529 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 81687705 81690088 490740 488357 NC_000014.9 velvet.61040 99.87 True fake: scaffold gap size wrong estimation (local) 81685779 81687420 493371 491730 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 81683498 81685501 496294 494290 NC_000014.9 velvet.61040 99.85 True fake: scaffold gap size wrong estimation (local) 81679648 81683231 501069 497392 NC_000014.9 velvet.61040 99.89 True fake: scaffold gap size wrong estimation (extensive) 81667111 81667697 506567 505981 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 81664497 81665316 510015 509196 NC_000014.9 velvet.61040 100.0 True relocation, scaffold gap is present, inconsistency = 46298061 35362228 35364545 511906 514223 NC_000014.9 velvet.61040 99.87 True fake: scaffold gap size wrong estimation (local) 35393741 35395048 538234 539541 NC_000014.9 velvet.61040 100.0 True relocation, scaffold gap is present, inconsistency = 6409514 41805715 41808193 543172 540694 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 41804467 41805383 544997 544081 NC_000014.9 velvet.61040 98.91 True fake: scaffold gap size wrong estimation (local) 41795925 41803863 555757 547819 NC_000014.9 velvet.61040 99.95 True relocation, scaffold gap is present, inconsistency = 17137194 24653921 24658704 555784 560567 NC_000014.9 velvet.61040 99.87 True relocation, scaffold gap is present, inconsistency = 56982345 81641144 81642130 560662 561648 NC_000014.9 velvet.61040 100.0 True inversion, scaffold gap is present 81640191 81640718 562186 561659 NC_000014.9 velvet.61040 97.92 True relocation, scaffold gap is present, inconsistency = -28041 81666129 81667079 564289 563339 NC_000014.9 velvet.61040 99.79 True fake: scaffold gap size wrong estimation (local) 81663670 81664194 567449 566925 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 81660888 81663402 571110 568598 NC_000014.9 velvet.61040 99.84 True fake: scaffold gap size wrong estimation (local) 81659117 81660543 573581 572176 NC_000014.9 velvet.61040 98.45 True fake: scaffold gap size wrong estimation (local) 81657581 81658930 575357 574008 NC_000014.9 velvet.61040 99.78 True fake: scaffold gap size wrong estimation (local) 81644461 81645958 581556 580059 NC_000014.9 velvet.61040 99.87 True fake: not a misassembly (possible transposable element) 81637428 81638311 581567 582450 NC_000014.9 velvet.61040 99.77 True fake: not a misassembly (possible transposable element) 81643298 81644399 583562 582461 NC_000014.9 velvet.61040 100.0 True relocation, scaffold gap is present, inconsistency = 8677003 72963651 72964234 586206 585623 NC_000014.9 velvet.61040 99.66 True fake: scaffold gap size wrong estimation (local) 72962755 72963402 586918 586271 NC_000014.9 velvet.61040 99.85 True fake: scaffold gap size wrong estimation (local) 72960415 72962483 590016 587956 NC_000014.9 velvet.61040 99.17 True fake: scaffold gap size wrong estimation (local) 72958248 72960085 592898 591061 NC_000014.9 velvet.61040 99.89 True fake: scaffold gap size wrong estimation (local) 72957193 72958075 594557 593675 NC_000014.9 velvet.61040 98.87 True local misassembly 72956194 72956939 595303 594558 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 72955100 72955908 597153 596345 NC_000014.9 velvet.61040 99.88 True fake: scaffold gap size wrong estimation (local) 72953827 72954852 598589 597574 NC_000014.9 velvet.61040 98.89 True fake: scaffold gap size wrong estimation (local) 72944973 72946207 601687 600407 NC_000014.9 velvet.61040 99.84 True local misassembly 72948287 72949223 603371 602435 NC_000014.9 velvet.61040 99.68 True fake: scaffold gap size wrong estimation (local) 72942630 72944513 605265 603382 NC_000014.9 velvet.61040 99.79 True fake: scaffold gap size wrong estimation (local) 72936566 72937397 606103 605276 NC_000014.9 velvet.61040 99.28 True relocation, scaffold gap is present, inconsistency = -9017 72941612 72942595 610074 609091 NC_000014.9 velvet.61040 100.0 True relocation, scaffold gap is present, inconsistency = 22653232 50262419 50263759 636035 634695 NC_000014.9 velvet.61040 99.25 True fake: scaffold gap size wrong estimation (local) 50261117 50261675 638024 637466 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 50259799 50260833 639394 638358 NC_000014.9 velvet.61040 99.81 True fake: scaffold gap size wrong estimation (local) 50237305 50238099 656079 655285 NC_000014.9 velvet.61040 99.87 True relocation, scaffold gap is present, inconsistency = 25591861 24642868 24645433 658660 656090 NC_000014.9 velvet.61040 99.65 True local misassembly 24647039 24648035 659667 658671 NC_000014.9 velvet.61040 98.9 True local misassembly 24646036 24646835 660467 659668 NC_000014.9 velvet.61040 98.25 True fake: scaffold gap size wrong estimation (local) 24632102 24642604 671917 660796 NC_000014.9 velvet.61040 99.02 True inversion, scaffold gap is present 24649884 24652124 672924 675172 NC_000014.9 velvet.61040 99.78 True relocation, scaffold gap is present, inconsistency = 56984235 81638572 81639631 677385 678444 NC_000014.9 velvet.61040 100.0 True relocation, scaffold gap is present, inconsistency = -46393 81593249 81596104 678455 681310 NC_000014.9 velvet.61040 99.82 True fake: scaffold gap size wrong estimation (extensive) 81616022 81616622 692626 693226 NC_000014.9 velvet.61040 98.17 True fake: scaffold gap size wrong estimation (local) 81616820 81621021 694267 698517 NC_000014.9 velvet.61040 99.9 True fake: scaffold gap size wrong estimation (local) 81621310 81622870 699577 701137 NC_000014.9 velvet.61040 99.81 True fake: scaffold gap size wrong estimation (local) 81624250 81625849 703477 705076 NC_000014.9 velvet.61040 99.88 True fake: scaffold gap size wrong estimation (local) 81626020 81633972 706048 714022 NC_000014.9 velvet.61040 99.35 True fake: scaffold gap size wrong estimation (local) 81634258 81636126 715153 717021 NC_000014.9 velvet.61040 99.89 True relocation, scaffold gap is present, inconsistency = -29892678 51743459 51744306 717032 717879 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 51744823 51745928 717998 719103 NC_000014.9 velvet.61040 99.73 True relocation, scaffold gap is present, inconsistency = -10993 51735607 51740071 719775 725025 NC_000014.9 velvet.61040 99.86 True relocation, scaffold gap is present, inconsistency = 33204736 84945001 84946335 726553 725219 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 84943423 84944869 728680 727234 NC_000014.9 velvet.61040 100.0 True relocation, scaffold gap is present, inconsistency = 33184428 51746939 51753716 733959 740739 NC_000014.9 velvet.61040 99.81 True relocation, scaffold gap is present, inconsistency = 33176832 84939252 84941974 752119 749443 NC_000014.9 velvet.61040 98.31 True fake: scaffold gap size wrong estimation (local) 84938369 84938966 754068 753471 NC_000014.9 velvet.61040 100.0 True relocation, scaffold gap is present, inconsistency = 71990 84862165 84866368 754079 758282 NC_000014.9 velvet.61040 99.88 True fake: scaffold gap size wrong estimation (local) 84866670 84873497 759356 766318 NC_000014.9 velvet.61040 99.94 True fake: scaffold gap size wrong estimation (local) 84873709 84874959 767153 768403 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 84888600 84894011 777917 783409 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 84894233 84897975 784438 788271 NC_000014.9 velvet.61040 99.97 True relocation, scaffold gap is present, inconsistency = 23425 84936888 84937920 804791 803759 NC_000014.9 velvet.61040 99.81 True relocation, scaffold gap is present, inconsistency = 53271 84875168 84880241 813284 808167 NC_000014.9 velvet.61040 98.5 True relocation, scaffold gap is present, inconsistency = 10359 84854438 84861785 823763 816308 NC_000014.9 velvet.61040 99.97 True relocation, scaffold gap is present, inconsistency = 41678 84914224 84918890 834524 839190 NC_000014.9 velvet.61040 99.96 True relocation, scaffold gap is present, inconsistency = 7361603 77551391 77552610 840420 839201 NC_000014.9 velvet.61040 99.92 True fake: scaffold gap size wrong estimation (local) 77547603 77550294 844955 842278 NC_000014.9 velvet.61040 97.38 True fake: not a misassembly (possible transposable element) 84853344 84854412 846034 844966 NC_000014.9 velvet.61040 99.81 True fake: not a misassembly (possible transposable element) 77545539 77546721 848199 847017 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 77543257 77545288 851104 848985 NC_000014.9 velvet.61040 95.75 True fake: scaffold gap size wrong estimation (local) 77542020 77543093 853115 852042 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 77541276 77541796 853813 853293 NC_000014.9 velvet.61040 99.62 True relocation, scaffold gap is present, inconsistency = -7311771 84841357 84853036 866203 853824 NC_000014.9 velvet.61040 99.88 True fake: scaffold gap size wrong estimation (local) 84828014 84841270 880584 866552 NC_000014.9 velvet.61040 99.19 True fake: scaffold gap size wrong estimation (local) 84826879 84827923 882623 881579 NC_000014.9 velvet.61040 99.9 True relocation, scaffold gap is present, inconsistency = 50256 84883691 84884591 888135 889035 NC_000014.9 velvet.61040 99.89 True fake: not a misassembly (possible transposable element) 84881223 84883449 891272 889046 NC_000014.9 velvet.61040 100.0 True fake: not a misassembly (possible transposable element) 84884883 84888437 891283 894939 NC_000014.9 velvet.61040 99.97 True fake: scaffold gap size wrong estimation (extensive) 84899274 84902820 898766 902307 NC_000014.9 velvet.61040 99.86 True local misassembly 84898107 84898702 903109 903702 NC_000014.9 velvet.61040 99.66 True fake: scaffold gap size wrong estimation (local) 84904119 84906846 905034 907752 NC_000014.9 velvet.61040 99.63 True relocation, scaffold gap is present, inconsistency = 83740 84819610 84820368 908521 907763 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 84814991 84819527 913293 908757 NC_000014.9 velvet.61040 99.93 True fake: scaffold gap size wrong estimation (local) 84814032 84814632 915027 914427 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 84812611 84813817 916394 915188 NC_000014.9 velvet.61040 99.83 True fake: scaffold gap size wrong estimation (local) 84805838 84811779 923951 918022 NC_000014.9 velvet.61040 99.78 True inversion, scaffold gap is present 84795492 84800110 923962 928574 NC_000014.9 velvet.61040 99.78 True fake: scaffold gap size wrong estimation (local) 84800580 84805647 929861 935645 NC_000014.9 velvet.61040 99.8 True relocation, scaffold gap is present, inconsistency = 111139 84918914 84922124 937773 940983 NC_000014.9 velvet.61040 99.94 True fake: scaffold gap size wrong estimation (local) 84922380 84928442 941958 948735 NC_000014.9 velvet.61040 99.9 True fake: scaffold gap size wrong estimation (local) 84928706 84934268 949780 955331 NC_000014.9 velvet.61040 99.69 True fake: scaffold gap size wrong estimation (local) 84956201 84961412 972453 977664 NC_000014.9 velvet.61040 99.96 True relocation, scaffold gap is present, inconsistency = -14792 84946631 84949432 977675 980476 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 84949538 84956118 981212 988307 NC_000014.9 velvet.61040 99.48 True inversion, scaffold gap is present 84961401 84971086 998766 988318 NC_000014.9 velvet.61040 99.95 True relocation, scaffold gap is present, inconsistency = -13193 84971848 84974583 1001551 998777 NC_000014.9 velvet.61040 98.31 True inversion, scaffold gap is present 84989439 84993224 1014852 1019606 NC_000014.9 velvet.61040 99.97 True relocation, scaffold gap is present, inconsistency = -9567843 75426224 75428033 1020449 1022258 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 75428317 75432951 1023352 1027937 NC_000014.9 velvet.61040 98.88 True fake: not a misassembly (possible transposable element) 84993522 84994989 1029292 1030759 NC_000014.9 velvet.61040 99.93 True fake: not a misassembly (possible transposable element) 75458722 75465372 1059285 1065934 NC_000014.9 velvet.61040 99.88 True relocation, scaffold gap is present, inconsistency = 5860547 69596605 69597116 1067504 1066993 NC_000014.9 velvet.61040 99.8 True fake: scaffold gap size wrong estimation (local) 69594693 69596326 1070092 1068459 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 69592605 69594067 1072906 1071444 NC_000014.9 velvet.61040 99.93 True relocation, scaffold gap is present, inconsistency = -6834740 76425925 76427334 1074322 1072917 NC_000014.9 velvet.61040 99.72 True fake: scaffold gap size wrong estimation (local) 76424954 76425707 1075207 1074454 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 76423410 76424765 1077600 1076245 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 76422483 76423133 1078591 1077941 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 76419275 76422197 1082560 1079618 NC_000014.9 velvet.61040 99.12 True fake: scaffold gap size wrong estimation (extensive) 76406747 76408353 1085187 1083581 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 76405754 76406462 1086015 1085306 NC_000014.9 velvet.61040 99.86 True relocation, scaffold gap is present, inconsistency = 913803 75489427 75491141 1086825 1088539 NC_000014.9 velvet.61040 99.71 True fake: scaffold gap size wrong estimation (local) 75491449 75494404 1089522 1092546 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 75494629 75497984 1093523 1096878 NC_000014.9 velvet.61040 99.94 True relocation, scaffold gap is present, inconsistency = 55577 75555950 75558082 1101396 1099267 NC_000014.9 velvet.61040 98.46 True fake: scaffold gap size wrong estimation (local) 75555006 75555655 1102737 1102088 NC_000014.9 velvet.61040 99.69 True relocation, scaffold gap is present, inconsistency = 30955 75513043 75517062 1109726 1113824 NC_000014.9 velvet.61040 99.92 True fake: scaffold gap size wrong estimation (local) 75517218 75517743 1114228 1114796 NC_000014.9 velvet.61040 100.0 True fake: scaffold gap size wrong estimation (local) 75518035 75524812 1115657 1122646 NC_000014.9 velvet.61040 99.84 True fake: scaffold gap size wrong estimation (local) 75524831 75525412 1126737 1127318 NC_000014.9 velvet.61040 100.0 True relocation, scaffold gap is present, inconsistency = -42731598 32818579 32834145 1152083 1167921 NC_000014.9 velvet.61040 99.7 True fake: scaffold gap size wrong estimation (local) 32834583 32837981 1169105 1172497 NC_000014.9 velvet.61040 99.44 True fake: scaffold gap size wrong estimation (local) 32857865 32862005 1192532 1197718 NC_000014.9 velvet.61040 95.23 True CONTIG velvet.61040 1199257 misassembled 56645664 56647931 187 2442 NC_000014.9 velvet.61087 99.38 True fake: scaffold gap size wrong estimation (local) 56649745 56650760 4982 5997 NC_000014.9 velvet.61087 99.61 True fake: scaffold gap size wrong estimation (local) 56651358 56652468 6174 7283 NC_000014.9 velvet.61087 99.82 True fake: scaffold gap size wrong estimation (local) 56655418 56656218 7608 8408 NC_000014.9 velvet.61087 99.75 True local misassembly 56652491 56653037 8423 8969 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 56653776 56654569 9546 10339 NC_000014.9 velvet.61087 99.87 True relocation, scaffold gap is present, inconsistency = 46492535 103147659 103148193 10894 11428 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 103149287 103150479 11915 13107 NC_000014.9 velvet.61087 99.66 True fake: scaffold gap size wrong estimation (local) 103150725 103152040 14391 15706 NC_000014.9 velvet.61087 99.92 True relocation, scaffold gap is present, inconsistency = -46492758 56659293 56662891 15717 19315 NC_000014.9 velvet.61087 99.94 True fake: scaffold gap size wrong estimation (local) 56663140 56667332 20210 25077 NC_000014.9 velvet.61087 98.46 True relocation, scaffold gap is present, inconsistency = 46492870 103188264 103188926 53139 53801 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 103191967 103193047 58693 59773 NC_000014.9 velvet.61087 99.81 True relocation, scaffold gap is present, inconsistency = 36459764 66728903 66731435 63163 60541 NC_000014.9 velvet.61087 97.25 True relocation, scaffold gap is present, inconsistency = 11791622 54934244 54934946 66200 65498 NC_000014.9 velvet.61087 99.86 True fake: scaffold gap size wrong estimation (local) 54932896 54933674 67316 66538 NC_000014.9 velvet.61087 99.87 True fake: scaffold gap size wrong estimation (local) 54930462 54932289 70647 68820 NC_000014.9 velvet.61087 99.95 True relocation, scaffold gap is present, inconsistency = 1744587 56677036 56678594 70807 72365 NC_000014.9 velvet.61087 99.68 True fake: scaffold gap size wrong estimation (local) 56681484 56684882 72512 76099 NC_000014.9 velvet.61087 99.82 True fake: scaffold gap size wrong estimation (local) 56692299 56693200 79190 80091 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 56693494 56695068 81057 82631 NC_000014.9 velvet.61087 99.87 True fake: scaffold gap size wrong estimation (local) 56698053 56698861 86802 87610 NC_000014.9 velvet.61087 99.51 True local misassembly 56699112 56700310 87611 88809 NC_000014.9 velvet.61087 99.17 True local misassembly 56696174 56697225 90375 91425 NC_000014.9 velvet.61087 99.9 True fake: scaffold gap size wrong estimation (local) 56701190 56703063 92020 93895 NC_000014.9 velvet.61087 99.68 True fake: scaffold gap size wrong estimation (local) 56703277 56704873 94821 96418 NC_000014.9 velvet.61087 99.5 True fake: scaffold gap size wrong estimation (local) 56705141 56706723 96638 99059 NC_000014.9 velvet.61087 99.81 True relocation, scaffold gap is present, inconsistency = -20782 56685952 56689926 99070 103043 NC_000014.9 velvet.61087 99.87 True fake: scaffold gap size wrong estimation (local) 56690033 56692277 103556 106391 NC_000014.9 velvet.61087 99.91 True fake: scaffold gap size wrong estimation (local) 56717955 56719315 128956 130344 NC_000014.9 velvet.61087 96.0 True relocation, scaffold gap is present, inconsistency = 10006207 66725651 66727199 132021 130473 NC_000014.9 velvet.61087 99.87 True fake: scaffold gap size wrong estimation (local) 66721983 66725471 136538 132937 NC_000014.9 velvet.61087 98.24 True fake: scaffold gap size wrong estimation (local) 66720724 66721689 138370 137405 NC_000014.9 velvet.61087 100.0 True relocation, scaffold gap is present, inconsistency = 36484395 103221420 103223310 153706 155580 NC_000014.9 velvet.61087 98.56 True fake: scaffold gap size wrong estimation (local) 103223785 103224550 157073 157838 NC_000014.9 velvet.61087 99.87 True local misassembly 103224734 103226047 157839 159152 NC_000014.9 velvet.61087 99.24 True fake: scaffold gap size wrong estimation (local) 103226260 103234834 160273 168846 NC_000014.9 velvet.61087 99.65 True inversion, scaffold gap is present 103237771 103238673 169854 168952 NC_000014.9 velvet.61087 99.89 True fake: scaffold gap size wrong estimation (local) 103236534 103237150 172320 171704 NC_000014.9 velvet.61087 99.35 True fake: scaffold gap size wrong estimation (local) 103234950 103236059 173991 172882 NC_000014.9 velvet.61087 100.0 True inversion, scaffold gap is present 103240376 103242936 176793 179301 NC_000014.9 velvet.61087 97.78 True relocation, scaffold gap is present, inconsistency = -20455780 82787167 82791544 179312 183685 NC_000014.9 velvet.61087 99.77 True inversion, scaffold gap is present 82793456 82798264 188503 183696 NC_000014.9 velvet.61087 99.94 True fake: scaffold gap size wrong estimation (local) 82791533 82793191 191228 189525 NC_000014.9 velvet.61087 99.94 True relocation, scaffold gap is present, inconsistency = 16019617 66763624 66765667 199562 197477 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 66762139 66763205 201577 200513 NC_000014.9 velvet.61087 99.81 True fake: scaffold gap size wrong estimation (local) 66757662 66761655 206551 202541 NC_000014.9 velvet.61087 99.97 True fake: scaffold gap size wrong estimation (local) 66753747 66757312 211051 207486 NC_000014.9 velvet.61087 100.0 True relocation, scaffold gap is present, inconsistency = 36018351 102775674 102777189 211062 212576 NC_000014.9 velvet.61087 99.87 True relocation, scaffold gap is present, inconsistency = -19957115 82820085 82823964 212587 216466 NC_000014.9 velvet.61087 100.0 True relocation, scaffold gap is present, inconsistency = 20321629 103145604 103147379 218252 216477 NC_000014.9 velvet.61087 99.66 True relocation, scaffold gap is present, inconsistency = -9825 103154406 103155418 219275 218263 NC_000014.9 velvet.61087 99.01 True fake: scaffold gap size wrong estimation (local) 103153018 103153676 220444 219786 NC_000014.9 velvet.61087 99.85 True fake: scaffold gap size wrong estimation (extensive) 103127470 103144744 237763 220455 NC_000014.9 velvet.61087 99.29 True fake: scaffold gap size wrong estimation (local) 103120578 103127055 245631 239000 NC_000014.9 velvet.61087 99.47 True relocation, scaffold gap is present, inconsistency = 72225 103202533 103203185 248884 249536 NC_000014.9 velvet.61087 100.0 True relocation, scaffold gap is present, inconsistency = 93760 103101326 103103087 257029 255222 NC_000014.9 velvet.61087 99.94 True fake: scaffold gap size wrong estimation (local) 103096665 103100820 262516 258275 NC_000014.9 velvet.61087 99.88 True fake: scaffold gap size wrong estimation (local) 103093273 103096069 266790 263994 NC_000014.9 velvet.61087 99.89 True fake: scaffold gap size wrong estimation (local) 103088968 103092991 271885 267862 NC_000014.9 velvet.61087 99.83 True fake: scaffold gap size wrong estimation (local) 103086483 103088711 275250 272979 NC_000014.9 velvet.61087 99.91 True fake: scaffold gap size wrong estimation (local) 103083897 103086210 278609 276298 NC_000014.9 velvet.61087 99.61 True relocation, scaffold gap is present, inconsistency = 87301 102981773 102982518 292687 293432 NC_000014.9 velvet.61087 100.0 True local misassembly 102982881 102983542 293433 294094 NC_000014.9 velvet.61087 98.49 True relocation, scaffold gap is present, inconsistency = 79293 103062846 103064075 295334 294105 NC_000014.9 velvet.61087 99.92 True fake: scaffold gap size wrong estimation (local) 103058927 103060826 300281 298376 NC_000014.9 velvet.61087 99.63 True fake: scaffold gap size wrong estimation (local) 103057681 103058702 302243 301223 NC_000014.9 velvet.61087 99.8 True fake: scaffold gap size wrong estimation (local) 103055376 103056265 305093 304204 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 103049981 103051852 306983 305104 NC_000014.9 velvet.61087 97.52 True fake: scaffold gap size wrong estimation (local) 103048876 103049766 308584 307694 NC_000014.9 velvet.61087 99.89 True fake: scaffold gap size wrong estimation (local) 103043190 103044239 310718 309669 NC_000014.9 velvet.61087 99.9 True local misassembly 103045042 103046678 313664 312028 NC_000014.9 velvet.61087 99.94 True relocation, scaffold gap is present, inconsistency = 4924322 98115203 98115727 319181 318657 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 98107267 98111202 323127 319192 NC_000014.9 velvet.61087 100.0 True relocation, scaffold gap is present, inconsistency = -4925269 103030656 103032525 325007 323138 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 103029864 103030412 327087 326539 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 103028105 103029275 328374 327204 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 103026840 103027846 330219 329213 NC_000014.9 velvet.61087 99.9 True relocation, scaffold gap is present, inconsistency = 11440 103014198 103015389 330230 331421 NC_000014.9 velvet.61087 100.0 True inversion, scaffold gap is present 103023488 103025499 334774 332763 NC_000014.9 velvet.61087 100.0 True relocation, scaffold gap is present, inconsistency = 26568527 76453829 76454903 334832 335906 NC_000014.9 velvet.61087 100.0 True local misassembly 76452655 76453613 335917 336875 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 76456085 76457722 338702 340338 NC_000014.9 velvet.61087 99.94 True local misassembly 76455225 76455817 340454 341046 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 76470239 76473134 350284 353179 NC_000014.9 velvet.61087 99.86 True fake: scaffold gap size wrong estimation (local) 76485684 76487772 369836 371924 NC_000014.9 velvet.61087 99.95 True fake: scaffold gap size wrong estimation (local) 76493458 76494321 371935 372798 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 76494568 76503192 373576 382200 NC_000014.9 velvet.61087 99.92 True relocation, scaffold gap is present, inconsistency = 396941 76900144 76902095 382211 384162 NC_000014.9 velvet.61087 100.0 True local misassembly 76899030 76899903 384173 385046 NC_000014.9 velvet.61087 100.0 True relocation, scaffold gap is present, inconsistency = -395524 76504568 76505723 385235 386389 NC_000014.9 velvet.61087 99.83 True relocation, scaffold gap is present, inconsistency = 26507026 103012760 103013880 387520 386400 NC_000014.9 velvet.61087 99.02 True local misassembly 103011706 103012373 388312 387645 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 103009868 103010744 391059 390220 NC_000014.9 velvet.61087 95.57 True fake: scaffold gap size wrong estimation (local) 103006017 103009151 395323 392186 NC_000014.9 velvet.61087 99.87 True fake: scaffold gap size wrong estimation (local) 102999242 103004646 403103 397699 NC_000014.9 velvet.61087 99.98 True local misassembly 102998095 102998876 403885 403104 NC_000014.9 velvet.61087 99.87 True fake: scaffold gap size wrong estimation (local) 102996814 102997860 406323 405277 NC_000014.9 velvet.61087 100.0 True relocation, scaffold gap is present, inconsistency = 26489957 76505734 76506846 406334 407446 NC_000014.9 velvet.61087 99.91 True fake: not a misassembly (possible transposable element) 76902607 76903463 407457 408304 NC_000014.9 velvet.61087 98.94 True fake: not a misassembly (possible transposable element) 76507084 76507698 408315 408929 NC_000014.9 velvet.61087 99.51 True fake: scaffold gap size wrong estimation (local) 76507971 76515138 409781 416948 NC_000014.9 velvet.61087 99.93 True fake: scaffold gap size wrong estimation (local) 76515265 76516324 417693 418750 NC_000014.9 velvet.61087 99.81 True fake: scaffold gap size wrong estimation (local) 76518550 76520756 421721 423931 NC_000014.9 velvet.61087 99.82 True relocation, scaffold gap is present, inconsistency = 385085 76935022 76935999 453112 454089 NC_000014.9 velvet.61087 99.9 True local misassembly 76936274 76936792 454095 454613 NC_000014.9 velvet.61087 97.88 True fake: scaffold gap size wrong estimation (local) 76937085 76938799 455967 457681 NC_000014.9 velvet.61087 99.88 True fake: scaffold gap size wrong estimation (local) 76939600 76940616 458884 459948 NC_000014.9 velvet.61087 99.89 True relocation, scaffold gap is present, inconsistency = 23639081 100580313 100582215 460564 462466 NC_000014.9 velvet.61087 99.95 True fake: scaffold gap size wrong estimation (local) 100582444 100583631 463241 464428 NC_000014.9 velvet.61087 99.92 True fake: scaffold gap size wrong estimation (local) 100584001 100585221 465433 466653 NC_000014.9 velvet.61087 99.92 True fake: scaffold gap size wrong estimation (local) 100612877 100613714 491886 492723 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 100614537 100615305 493831 494599 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 100615885 100617444 495785 497344 NC_000014.9 velvet.61087 99.87 True relocation, scaffold gap is present, inconsistency = -24087461 76529994 76530638 497355 497999 NC_000014.9 velvet.61087 99.22 True fake: scaffold gap size wrong estimation (local) 76533085 76534443 503773 505131 NC_000014.9 velvet.61087 99.93 True local misassembly 76530902 76532854 505142 507094 NC_000014.9 velvet.61087 99.69 True fake: scaffold gap size wrong estimation (local) 76535030 76535540 507978 508488 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 76537441 76538886 511167 512612 NC_000014.9 velvet.61087 99.93 True fake: scaffold gap size wrong estimation (local) 76560920 76562113 538121 539314 NC_000014.9 velvet.61087 99.75 True fake: scaffold gap size wrong estimation (local) 76567769 76569949 539578 542066 NC_000014.9 velvet.61087 96.09 True local misassembly 76563563 76564745 542077 543259 NC_000014.9 velvet.61087 100.0 True local misassembly 76564903 76565423 543260 543780 NC_000014.9 velvet.61087 98.08 True fake: scaffold gap size wrong estimation (local) 76572077 76572620 544835 545378 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 76573265 76575634 546979 549355 NC_000014.9 velvet.61087 99.62 True fake: scaffold gap size wrong estimation (local) 76575919 76579361 550504 554409 NC_000014.9 velvet.61087 99.82 True fake: scaffold gap size wrong estimation (local) 76579635 76588101 555202 563663 NC_000014.9 velvet.61087 99.83 True relocation, scaffold gap is present, inconsistency = 15833922 92423426 92424504 566144 565066 NC_000014.9 velvet.61087 99.72 True fake: scaffold gap size wrong estimation (local) 92418975 92420199 567379 566155 NC_000014.9 velvet.61087 100.0 True local misassembly 92421743 92422883 568804 567664 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 92420478 92421532 571698 570644 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 92414715 92415474 572468 571709 NC_000014.9 velvet.61087 100.0 True fake: not a misassembly (possible transposable element) 76620519 76622242 572479 574202 NC_000014.9 velvet.61087 99.83 True fake: not a misassembly (possible transposable element) 92410344 92414609 578478 574213 NC_000014.9 velvet.61087 99.98 True relocation, scaffold gap is present, inconsistency = -27999 92436529 92438332 580292 578489 NC_000014.9 velvet.61087 99.94 True relocation, scaffold gap is present, inconsistency = 15824667 76609778 76610297 581857 582376 NC_000014.9 velvet.61087 99.62 True fake: scaffold gap size wrong estimation (local) 76610530 76615292 582713 588309 NC_000014.9 velvet.61087 97.44 True inversion, scaffold gap is present 76607169 76608396 590391 589163 NC_000014.9 velvet.61087 99.67 True fake: scaffold gap size wrong estimation (local) 76603076 76606884 595383 591575 NC_000014.9 velvet.61087 99.84 True fake: scaffold gap size wrong estimation (local) 76602285 76602793 596524 596016 NC_000014.9 velvet.61087 99.8 True fake: scaffold gap size wrong estimation (local) 76598345 76601979 601019 597395 NC_000014.9 velvet.61087 99.37 True relocation, scaffold gap is present, inconsistency = 8939444 67656247 67657591 603673 602329 NC_000014.9 velvet.61087 99.93 True relocation, scaffold gap is present, inconsistency = -11563099 79217143 79219031 605876 603988 NC_000014.9 velvet.61087 99.95 True fake: scaffold gap size wrong estimation (local) 79209315 79216843 614825 606694 NC_000014.9 velvet.61087 99.91 True fake: scaffold gap size wrong estimation (local) 79202752 79208937 622172 615987 NC_000014.9 velvet.61087 99.95 True fake: scaffold gap size wrong estimation (local) 79202077 79202603 623415 622889 NC_000014.9 velvet.61087 100.0 True relocation, scaffold gap is present, inconsistency = 58166920 21028470 21029327 630102 629245 NC_000014.9 velvet.61087 98.83 True fake: scaffold gap size wrong estimation (local) 21023586 21028250 635838 631174 NC_000014.9 velvet.61087 99.72 True indel: indel (<= 5bp) 21020297 21023585 639128 635840 NC_000014.9 velvet.61087 99.97 True relocation, scaffold gap is present, inconsistency = 3875418 24899817 24901154 639942 641279 NC_000014.9 velvet.61087 99.85 True fake: scaffold gap size wrong estimation (local) 24901307 24909736 642097 650528 NC_000014.9 velvet.61087 99.89 True relocation, scaffold gap is present, inconsistency = 42708722 67618636 67621531 653601 650706 NC_000014.9 velvet.61087 99.97 True relocation, scaffold gap is present, inconsistency = 22571065 90194008 90198585 655013 659554 NC_000014.9 velvet.61087 99.12 True relocation, scaffold gap is present, inconsistency = -65288839 24909757 24911246 659565 661054 NC_000014.9 velvet.61087 99.93 True relocation, scaffold gap is present, inconsistency = 42862061 67773582 67774211 661329 661958 NC_000014.9 velvet.61087 100.0 True relocation, scaffold gap is present, inconsistency = 46780751 20992002 20992781 662787 662008 NC_000014.9 velvet.61087 100.0 True local misassembly 20993744 20997955 667125 662798 NC_000014.9 velvet.61087 99.83 True fake: scaffold gap size wrong estimation (local) 20992788 20993456 668829 668161 NC_000014.9 velvet.61087 100.0 True relocation, scaffold gap is present, inconsistency = 46780520 67774966 67779321 669819 674129 NC_000014.9 velvet.61087 98.88 True fake: not a misassembly (possible transposable element) 67786263 67787097 676050 675215 NC_000014.9 velvet.61087 99.4 True fake: not a misassembly (possible transposable element) 67780099 67786274 676061 682236 NC_000014.9 velvet.61087 99.85 True relocation, scaffold gap is present, inconsistency = 26647843 41119768 41126007 694730 688485 NC_000014.9 velvet.61087 99.82 True relocation, scaffold gap is present, inconsistency = 20128912 20988480 20990845 697142 694741 NC_000014.9 velvet.61087 99.79 True relocation, scaffold gap is present, inconsistency = 13278 20973975 20974756 698369 697588 NC_000014.9 velvet.61087 100.0 True indel: indel (> 5bp) 20973354 20973957 699030 698427 NC_000014.9 velvet.61087 98.18 True local misassembly 20972443 20973135 699723 699031 NC_000014.9 velvet.61087 100.0 True relocation, scaffold gap is present, inconsistency = -14284 20959192 20960711 727258 725739 NC_000014.9 velvet.61087 99.87 True fake: scaffold gap size wrong estimation (local) 20957422 20958021 729889 729290 NC_000014.9 velvet.61087 100.0 True relocation, scaffold gap is present, inconsistency = -46630732 67582841 67587638 735202 730405 NC_000014.9 velvet.61087 99.9 True fake: scaffold gap size wrong estimation (local) 67570995 67582533 748482 736077 NC_000014.9 velvet.61087 99.82 True fake: scaffold gap size wrong estimation (local) 67566753 67570755 753513 749455 NC_000014.9 velvet.61087 98.18 True relocation, scaffold gap is present, inconsistency = 34494810 33058157 33071932 753524 770480 NC_000014.9 velvet.61087 97.41 True fake: scaffold gap size wrong estimation (local) 33072213 33074446 771430 773663 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 33074634 33077074 774565 777005 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 33080411 33087139 777016 783661 NC_000014.9 velvet.61087 98.13 True relocation, scaffold gap is present, inconsistency = -10987 33077106 33077788 784615 785297 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 33078144 33079353 785890 787154 NC_000014.9 velvet.61087 99.92 True relocation, scaffold gap is present, inconsistency = 34457649 67537639 67540341 790493 787791 NC_000014.9 velvet.61087 99.82 True fake: scaffold gap size wrong estimation (local) 67508136 67509304 815668 814434 NC_000014.9 velvet.61087 99.29 True fake: scaffold gap size wrong estimation (local) 67505959 67506701 818751 818009 NC_000014.9 velvet.61087 98.38 True local misassembly 67505002 67505692 819442 818752 NC_000014.9 velvet.61087 99.86 True fake: scaffold gap size wrong estimation (local) 67497058 67498668 825377 823767 NC_000014.9 velvet.61087 99.81 True fake: scaffold gap size wrong estimation (local) 67489990 67495469 833265 827786 NC_000014.9 velvet.61087 99.98 True fake: scaffold gap size wrong estimation (local) 67487895 67489706 836150 834339 NC_000014.9 velvet.61087 99.89 True fake: not a misassembly (possible transposable element) 36689385 36693938 836161 840712 NC_000014.9 velvet.61087 99.96 True fake: not a misassembly (possible transposable element) 67486590 67487864 843170 841891 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 67483266 67486240 847341 844302 NC_000014.9 velvet.61087 100.0 True fake: not a misassembly (possible transposable element) 67481118 67483041 848238 850161 NC_000014.9 velvet.61087 100.0 True fake: not a misassembly (possible transposable element) 67479695 67481049 851526 850172 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 67477168 67479146 854687 852709 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (extensive) 67468921 67469424 855201 854698 NC_000014.9 velvet.61087 100.0 True local misassembly 67469559 67473955 859749 855353 NC_000014.9 velvet.61087 99.95 True fake: scaffold gap size wrong estimation (local) 67459305 67460419 864548 863434 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 67457361 67458888 867059 865536 NC_000014.9 velvet.61087 99.67 True local misassembly 67460696 67462432 869548 867812 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 67455114 67456010 870794 869899 NC_000014.9 velvet.61087 99.67 True fake: scaffold gap size wrong estimation (local) 67452328 67454852 874416 871892 NC_000014.9 velvet.61087 99.96 True fake: scaffold gap size wrong estimation (local) 67448319 67449656 879689 878352 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 67445673 67448112 883129 880690 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 67445022 67445568 884585 884039 NC_000014.9 velvet.61087 98.17 True fake: scaffold gap size wrong estimation (local) 67426728 67427907 902476 901297 NC_000014.9 velvet.61087 99.92 True fake: scaffold gap size wrong estimation (local) 67426010 67426583 904409 903836 NC_000014.9 velvet.61087 98.08 True fake: scaffold gap size wrong estimation (local) 67424586 67425096 905316 904806 NC_000014.9 velvet.61087 98.04 True fake: scaffold gap size wrong estimation (local) 67423094 67423953 908022 907163 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 67415944 67417456 911608 910075 NC_000014.9 velvet.61087 98.17 True fake: scaffold gap size wrong estimation (local) 67388954 67391266 935166 932854 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 67385441 67388684 939517 936220 NC_000014.9 velvet.61087 100.0 True relocation, scaffold gap is present, inconsistency = 37360148 30015193 30018535 946275 949612 NC_000014.9 velvet.61087 99.64 True relocation, scaffold gap is present, inconsistency = 49501254 79519800 79520391 949623 950214 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (extensive) 79546195 79548065 966445 968315 NC_000014.9 velvet.61087 99.95 True relocation, scaffold gap is present, inconsistency = 12130546 67411137 67415638 973461 968326 NC_000014.9 velvet.61087 99.14 True relocation, scaffold gap is present, inconsistency = 21351441 46056864 46059685 976291 973472 NC_000014.9 velvet.61087 99.79 True relocation, scaffold gap is present, inconsistency = 33490562 79550270 79556672 976314 982716 NC_000014.9 velvet.61087 99.92 True relocation, scaffold gap is present, inconsistency = 12139171 67409208 67411088 984607 982727 NC_000014.9 velvet.61087 99.95 True relocation, inconsistency = 8912274 76323363 76324477 984608 985722 NC_000014.9 velvet.61087 99.83 True fake: scaffold gap size wrong estimation (local) 76325260 76327056 987279 989075 NC_000014.9 velvet.61087 99.72 True relocation, scaffold gap is present, inconsistency = -33475223 42851977 42853045 989219 990287 NC_000014.9 velvet.61087 99.81 True fake: scaffold gap size wrong estimation (local) 42853322 42861452 991272 1000209 NC_000014.9 velvet.61087 99.93 True relocation, scaffold gap is present, inconsistency = 24529174 67391281 67393449 1003032 1000864 NC_000014.9 velvet.61087 100.0 True relocation, scaffold gap is present, inconsistency = -11687 67399849 67400714 1006151 1005286 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 67394348 67396128 1007942 1006162 NC_000014.9 velvet.61087 100.0 True relocation, scaffold gap is present, inconsistency = 24525530 42867229 42868807 1007953 1009531 NC_000014.9 velvet.61087 100.0 True relocation, scaffold gap is present, inconsistency = -8433423 34435931 34436947 1010078 1011094 NC_000014.9 velvet.61087 100.0 True relocation, scaffold gap is present, inconsistency = 8425550 42862508 42867191 1011105 1015788 NC_000014.9 velvet.61087 99.98 True relocation, scaffold gap is present, inconsistency = 27575961 70443163 70444942 1015799 1017578 NC_000014.9 velvet.61087 99.89 True relocation, scaffold gap is present, inconsistency = 3057743 67380018 67385409 1023946 1017589 NC_000014.9 velvet.61087 100.0 True relocation, scaffold gap is present, inconsistency = 30230037 37142425 37145466 1028461 1032417 NC_000014.9 velvet.61087 99.77 True relocation, scaffold gap is present, inconsistency = 30207047 67372827 67379636 1060433 1052731 NC_000014.9 velvet.61087 99.1 True fake: not a misassembly (possible transposable element) 30018708 30023346 1060444 1065082 NC_000014.9 velvet.61087 99.87 True fake: not a misassembly (possible transposable element) 67370255 67372556 1067356 1065093 NC_000014.9 velvet.61087 98.04 True fake: scaffold gap size wrong estimation (local) 67367787 67369878 1070842 1068751 NC_000014.9 velvet.61087 99.47 True local misassembly 67362294 67364687 1073236 1070843 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 67356435 67362012 1080007 1074367 NC_000014.9 velvet.61087 99.98 True relocation, scaffold gap is present, inconsistency = -7241469 74588348 74590386 1089614 1087525 NC_000014.9 velvet.61087 99.8 True fake: scaffold gap size wrong estimation (local) 74582409 74588229 1096343 1090523 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 74580935 74582005 1098477 1097407 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 74579130 74580678 1100532 1098984 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 74577761 74578867 1102253 1101147 NC_000014.9 velvet.61087 100.0 True relocation, scaffold gap is present, inconsistency = 83755 74487576 74488466 1107793 1108683 NC_000014.9 velvet.61087 99.78 True fake: scaffold gap size wrong estimation (local) 74488740 74491095 1109540 1111889 NC_000014.9 velvet.61087 99.66 True fake: scaffold gap size wrong estimation (local) 74491371 74491980 1112820 1113429 NC_000014.9 velvet.61087 100.0 True relocation, scaffold gap is present, inconsistency = 28686553 45790353 45794628 1127819 1123619 NC_000014.9 velvet.61087 98.12 True relocation, scaffold gap is present, inconsistency = 24649592 70445026 70448269 1128625 1131934 NC_000014.9 velvet.61087 99.94 True fake: scaffold gap size wrong estimation (local) 70448542 70451846 1132919 1136093 NC_000014.9 velvet.61087 95.92 True fake: scaffold gap size wrong estimation (local) 70454122 70454868 1141903 1142649 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (extensive) 70483084 70484181 1161966 1163063 NC_000014.9 velvet.61087 100.0 True relocation, scaffold gap is present, inconsistency = -40434679 30049513 30050399 1163074 1163960 NC_000014.9 velvet.61087 99.89 True fake: scaffold gap size wrong estimation (local) 30050574 30051096 1164233 1164755 NC_000014.9 velvet.61087 99.24 True inversion, scaffold gap is present 30051985 30061795 1174658 1164766 NC_000014.9 velvet.61087 99.92 True fake: scaffold gap size wrong estimation (local) 30051249 30051895 1175460 1174815 NC_000014.9 velvet.61087 99.23 True relocation, scaffold gap is present, inconsistency = 37294709 67346615 67347492 1175471 1176348 NC_000014.9 velvet.61087 100.0 True fake: not a misassembly (possible transposable element) 97236137 97240090 1176359 1180312 NC_000014.9 velvet.61087 99.95 True fake: not a misassembly (possible transposable element) 67349694 67351645 1180323 1182274 NC_000014.9 velvet.61087 100.0 True local misassembly 67348834 67349596 1182285 1183047 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 67352852 67353507 1186647 1187302 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 67353840 67354867 1188053 1189096 NC_000014.9 velvet.61087 100.0 True relocation, scaffold gap is present, inconsistency = 3130666 70485557 70488907 1189120 1192425 NC_000014.9 velvet.61087 98.53 True fake: scaffold gap size wrong estimation (local) 70508654 70510540 1211749 1213704 NC_000014.9 velvet.61087 97.21 True fake: scaffold gap size wrong estimation (local) 70511073 70511810 1215404 1216141 NC_000014.9 velvet.61087 100.0 True relocation, scaffold gap is present, inconsistency = 5461445 65019445 65020448 1246325 1245321 NC_000014.9 velvet.61087 99.9 True relocation, scaffold gap is present, inconsistency = -19879 65033834 65035534 1251815 1250115 NC_000014.9 velvet.61087 99.76 True fake: scaffold gap size wrong estimation (local) 65031893 65033571 1254722 1253008 NC_000014.9 velvet.61087 99.94 True relocation, scaffold gap is present, inconsistency = 5505584 70540181 70540826 1255748 1256393 NC_000014.9 velvet.61087 100.0 True local misassembly 70541132 70542687 1256394 1257949 NC_000014.9 velvet.61087 99.1 True fake: scaffold gap size wrong estimation (local) 70542970 70544084 1258228 1259342 NC_000014.9 velvet.61087 99.46 True fake: scaffold gap size wrong estimation (local) 70545636 70546140 1261848 1262352 NC_000014.9 velvet.61087 100.0 True relocation, scaffold gap is present, inconsistency = -21818338 48727813 48728734 1262363 1263284 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 48728998 48732487 1264012 1267501 NC_000014.9 velvet.61087 99.91 True fake: scaffold gap size wrong estimation (local) 48732743 48746437 1268497 1283803 NC_000014.9 velvet.61087 99.93 True fake: scaffold gap size wrong estimation (local) 48747098 48750433 1285258 1288593 NC_000014.9 velvet.61087 99.97 True fake: scaffold gap size wrong estimation (local) 48750704 48758428 1289624 1297348 NC_000014.9 velvet.61087 99.88 True fake: scaffold gap size wrong estimation (local) 48759229 48759786 1299003 1299560 NC_000014.9 velvet.61087 99.28 True relocation, scaffold gap is present, inconsistency = 16816871 65577095 65578477 1301380 1299998 NC_000014.9 velvet.61087 100.0 True inversion, scaffold gap is present 65571165 65576606 1301498 1307289 NC_000014.9 velvet.61087 99.09 True relocation, scaffold gap is present, inconsistency = 4977097 70553834 70557736 1307420 1311330 NC_000014.9 velvet.61087 99.87 True fake: scaffold gap size wrong estimation (local) 70559343 70560781 1313642 1315080 NC_000014.9 velvet.61087 99.86 True fake: scaffold gap size wrong estimation (local) 70561063 70561870 1315264 1316069 NC_000014.9 velvet.61087 99.01 True fake: scaffold gap size wrong estimation (local) 70564820 70566758 1316080 1318010 NC_000014.9 velvet.61087 99.59 True fake: scaffold gap size wrong estimation (local) 70566969 70569910 1318961 1321902 NC_000014.9 velvet.61087 100.0 True fake: scaffold gap size wrong estimation (local) 70569911 70571485 1325685 1327259 NC_000014.9 velvet.61087 99.3 True indel: indel (<= 5bp) 70571486 70572015 1327261 1327790 NC_000014.9 velvet.61087 99.43 True fake: scaffold gap size wrong estimation (local) 70572114 70574398 1327881 1330152 NC_000014.9 velvet.61087 99.21 True relocation, scaffold gap is present, inconsistency = -21814625 48761958 48762896 1332337 1333275 NC_000014.9 velvet.61087 99.79 True local misassembly 48759798 48760896 1333286 1334384 NC_000014.9 velvet.61087 99.82 True fake: scaffold gap size wrong estimation (local) 48761354 48761926 1334776 1335348 NC_000014.9 velvet.61087 96.68 True fake: scaffold gap size wrong estimation (local) 48763174 48766341 1337559 1340730 NC_000014.9 velvet.61087 99.68 True fake: not a misassembly (possible transposable element) 70580042 70584509 1343175 1347642 NC_000014.9 velvet.61087 99.98 True fake: not a misassembly (possible transposable element) 48777020 48778583 1347653 1349241 NC_000014.9 velvet.61087 98.3 True relocation, scaffold gap is present, inconsistency = 21806083 70584677 70585517 1349252 1350092 NC_000014.9 velvet.61087 99.88 True fake: scaffold gap size wrong estimation (local) 70588746 70592502 1350103 1353859 NC_000014.9 velvet.61087 100.0 True relocation, scaffold gap is present, inconsistency = -21825401 48767112 48770900 1353870 1357745 NC_000014.9 velvet.61087 99.89 True fake: scaffold gap size wrong estimation (local) 48771112 48773479 1358791 1361158 NC_000014.9 velvet.61087 99.87 True fake: scaffold gap size wrong estimation (local) 48774030 48775595 1362513 1364072 NC_000014.9 velvet.61087 99.42 True fake: scaffold gap size wrong estimation (local) 48776234 48776754 1365227 1365747 NC_000014.9 velvet.61087 99.42 True CONTIG velvet.61087 1366212 misassembled 34215046 34215951 906 1 NC_000014.9 velvet.61108 100.0 True fake: scaffold gap size wrong estimation (local) 34207618 34214710 8873 1781 NC_000014.9 velvet.61108 99.87 True indel: indel (<= 5bp) 34205765 34207614 10723 8874 NC_000014.9 velvet.61108 99.89 True local misassembly 34204304 34205251 11725 10778 NC_000014.9 velvet.61108 99.79 True fake: scaffold gap size wrong estimation (local) 34200345 34204022 16668 12991 NC_000014.9 velvet.61108 99.95 True fake: scaffold gap size wrong estimation (local) 34198798 34200038 18705 17512 NC_000014.9 velvet.61108 96.1 True fake: scaffold gap size wrong estimation (local) 34195622 34198538 22465 19497 NC_000014.9 velvet.61108 97.98 True fake: scaffold gap size wrong estimation (local) 34186652 34193046 31729 25334 NC_000014.9 velvet.61108 99.95 True fake: scaffold gap size wrong estimation (local) 34183212 34185265 35991 33943 NC_000014.9 velvet.61108 99.71 True fake: scaffold gap size wrong estimation (local) 34170808 34183014 49168 36968 NC_000014.9 velvet.61108 99.89 True fake: scaffold gap size wrong estimation (local) 34166157 34170529 54597 50225 NC_000014.9 velvet.61108 99.7 True local misassembly 34163738 34166156 60276 57858 NC_000014.9 velvet.61108 99.59 True fake: scaffold gap size wrong estimation (local) 34156201 34158615 62886 60472 NC_000014.9 velvet.61108 100.0 True fake: scaffold gap size wrong estimation (local) 34135803 34140028 81347 77120 NC_000014.9 velvet.61108 99.6 True fake: scaffold gap size wrong estimation (local) 34127607 34130677 85163 82093 NC_000014.9 velvet.61108 99.97 True relocation, scaffold gap is present, inconsistency = -7777 34130868 34135373 89679 85174 NC_000014.9 velvet.61108 100.0 True fake: scaffold gap size wrong estimation (local) 34119512 34127303 97481 89690 NC_000014.9 velvet.61108 99.87 True relocation, scaffold gap is present, inconsistency = -55168448 89286047 89287157 99394 98284 NC_000014.9 velvet.61108 98.74 True fake: scaffold gap size wrong estimation (local) 89284128 89285243 101933 100818 NC_000014.9 velvet.61108 99.64 True fake: scaffold gap size wrong estimation (local) 89278366 89283876 108240 102730 NC_000014.9 velvet.61108 99.89 True fake: scaffold gap size wrong estimation (local) 89276213 89278068 110584 108729 NC_000014.9 velvet.61108 100.0 True relocation, scaffold gap is present, inconsistency = 30088786 59176407 59187323 110688 121762 NC_000014.9 velvet.61108 99.94 True fake: scaffold gap size wrong estimation (local) 59192980 59195162 121773 123955 NC_000014.9 velvet.61108 99.95 True relocation, scaffold gap is present, inconsistency = 77809 59104174 59108672 134957 130454 NC_000014.9 velvet.61108 99.8 True fake: scaffold gap size wrong estimation (local) 59100754 59103934 138988 135808 NC_000014.9 velvet.61108 99.78 True relocation, scaffold gap is present, inconsistency = 30238540 89344057 89345758 140571 142296 NC_000014.9 velvet.61108 100.0 True fake: scaffold gap size wrong estimation (local) 89346063 89347698 143177 144812 NC_000014.9 velvet.61108 99.88 True fake: scaffold gap size wrong estimation (local) 89347983 89353773 145809 151599 NC_000014.9 velvet.61108 99.93 True fake: scaffold gap size wrong estimation (local) 89359338 89360711 152364 153741 NC_000014.9 velvet.61108 99.64 True local misassembly 89355507 89356084 154269 154846 NC_000014.9 velvet.61108 100.0 True local misassembly 89356385 89357264 154847 155726 NC_000014.9 velvet.61108 98.86 True fake: scaffold gap size wrong estimation (local) 89357640 89359055 157314 158729 NC_000014.9 velvet.61108 99.93 True relocation, scaffold gap is present, inconsistency = 8025540 97384606 97386252 160386 158740 NC_000014.9 velvet.61108 100.0 True relocation, scaffold gap is present, inconsistency = -10708 97386495 97394064 170000 161636 NC_000014.9 velvet.61108 99.1 True relocation, scaffold gap is present, inconsistency = 7933448 89450790 89452940 172257 170107 NC_000014.9 velvet.61108 99.86 True fake: scaffold gap size wrong estimation (local) 89448937 89449977 175113 174073 NC_000014.9 velvet.61108 99.04 True local misassembly 89448079 89448703 175738 175114 NC_000014.9 velvet.61108 100.0 True relocation, scaffold gap is present, inconsistency = 30448314 58994275 58996555 178948 181228 NC_000014.9 velvet.61108 99.87 True fake: not a misassembly (possible transposable element) 59063108 59063697 181827 181239 NC_000014.9 velvet.61108 99.49 True fake: not a misassembly (possible transposable element) 59000879 59002276 181838 183235 NC_000014.9 velvet.61108 99.86 True relocation, scaffold gap is present, inconsistency = 57480 59059767 59062686 186165 183246 NC_000014.9 velvet.61108 99.9 True fake: scaffold gap size wrong estimation (local) 59056413 59058037 190190 188566 NC_000014.9 velvet.61108 99.94 True fake: scaffold gap size wrong estimation (local) 59052600 59056156 195305 191213 NC_000014.9 velvet.61108 99.88 True fake: scaffold gap size wrong estimation (local) 59042814 59052383 207175 196072 NC_000014.9 velvet.61108 99.83 True relocation, scaffold gap is present, inconsistency = -30403005 89444996 89445808 207998 207186 NC_000014.9 velvet.61108 99.26 True fake: scaffold gap size wrong estimation (local) 89442194 89443725 211564 210033 NC_000014.9 velvet.61108 99.8 True fake: scaffold gap size wrong estimation (local) 89440763 89441914 214062 212911 NC_000014.9 velvet.61108 100.0 True relocation, scaffold gap is present, inconsistency = 52760 89387224 89387926 214139 214841 NC_000014.9 velvet.61108 100.0 True fake: scaffold gap size wrong estimation (local) 89390342 89391749 217809 219217 NC_000014.9 velvet.61108 99.93 True fake: scaffold gap size wrong estimation (local) 89393210 89394233 221598 222621 NC_000014.9 velvet.61108 100.0 True fake: scaffold gap size wrong estimation (local) 89397323 89398749 226160 227628 NC_000014.9 velvet.61108 99.85 True local misassembly 89394498 89396579 227639 229720 NC_000014.9 velvet.61108 99.95 True relocation, scaffold gap is present, inconsistency = -8412 89388178 89389976 229731 231529 NC_000014.9 velvet.61108 99.89 True local misassembly 89383063 89383807 231540 232284 NC_000014.9 velvet.61108 100.0 True fake: scaffold gap size wrong estimation (local) 89384324 89385571 232668 233915 NC_000014.9 velvet.61108 100.0 True fake: scaffold gap size wrong estimation (local) 89385814 89387003 235311 236500 NC_000014.9 velvet.61108 99.92 True relocation, scaffold gap is present, inconsistency = 11964 89398978 89401196 236511 238729 NC_000014.9 velvet.61108 99.86 True fake: scaffold gap size wrong estimation (local) 89401406 89403200 239705 241499 NC_000014.9 velvet.61108 99.94 True fake: scaffold gap size wrong estimation (local) 89403503 89404279 242433 243209 NC_000014.9 velvet.61108 100.0 True local misassembly 89404513 89405181 243210 243878 NC_000014.9 velvet.61108 96.41 True inversion, scaffold gap is present 89408522 89411870 247838 243889 NC_000014.9 velvet.61108 99.01 True fake: scaffold gap size wrong estimation (local) 89407000 89407599 250314 249715 NC_000014.9 velvet.61108 99.83 True fake: scaffold gap size wrong estimation (local) 89405348 89406144 251780 250984 NC_000014.9 velvet.61108 99.87 True relocation, scaffold gap is present, inconsistency = 11900 89422174 89424898 255910 258693 NC_000014.9 velvet.61108 99.89 True fake: scaffold gap size wrong estimation (local) 89425666 89426240 260191 260765 NC_000014.9 velvet.61108 99.83 True fake: scaffold gap size wrong estimation (local) 89427876 89431331 263180 266769 NC_000014.9 velvet.61108 99.97 True fake: scaffold gap size wrong estimation (local) 89434533 89435193 266935 267595 NC_000014.9 velvet.61108 99.55 True local misassembly 89435380 89436022 267596 268238 NC_000014.9 velvet.61108 98.44 True fake: scaffold gap size wrong estimation (local) 89436110 89436891 271378 272160 NC_000014.9 velvet.61108 99.74 True relocation, scaffold gap is present, inconsistency = -21013 89415889 89416997 272171 273279 NC_000014.9 velvet.61108 100.0 True fake: scaffold gap size wrong estimation (local) 89417211 89421161 274261 278329 NC_000014.9 velvet.61108 99.95 True relocation, scaffold gap is present, inconsistency = 31912 89369621 89374154 294096 289474 NC_000014.9 velvet.61108 98.57 True fake: scaffold gap size wrong estimation (local) 89368586 89369530 295720 294776 NC_000014.9 velvet.61108 99.89 True fake: scaffold gap size wrong estimation (local) 89366240 89368042 298499 296698 NC_000014.9 velvet.61108 99.89 True fake: scaffold gap size wrong estimation (local) 89364362 89365978 301003 299387 NC_000014.9 velvet.61108 99.94 True fake: scaffold gap size wrong estimation (local) 89362810 89363832 302933 301911 NC_000014.9 velvet.61108 99.8 True relocation, scaffold gap is present, inconsistency = 90007 89454286 89455939 303380 305033 NC_000014.9 velvet.61108 98.25 True fake: scaffold gap size wrong estimation (local) 89456748 89457759 306560 307571 NC_000014.9 velvet.61108 100.0 True fake: scaffold gap size wrong estimation (local) 89458061 89460786 308530 311255 NC_000014.9 velvet.61108 100.0 True fake: scaffold gap size wrong estimation (local) 89461369 89462689 312696 314016 NC_000014.9 velvet.61108 99.92 True fake: scaffold gap size wrong estimation (local) 89468414 89472002 314973 318560 NC_000014.9 velvet.61108 99.92 True fake: scaffold gap size wrong estimation (local) 89473329 89474871 320631 322171 NC_000014.9 velvet.61108 99.87 True fake: scaffold gap size wrong estimation (local) 89475120 89478257 322446 326417 NC_000014.9 velvet.61108 99.84 True fake: not a misassembly (possible transposable element) 89339246 89343471 331344 326428 NC_000014.9 velvet.61108 99.95 True fake: not a misassembly (possible transposable element) 89478956 89480207 332146 333397 NC_000014.9 velvet.61108 99.84 True fake: scaffold gap size wrong estimation (local) 89485165 89488115 339778 342728 NC_000014.9 velvet.61108 99.93 True fake: scaffold gap size wrong estimation (local) 89488496 89491037 343898 346483 NC_000014.9 velvet.61108 100.0 True fake: scaffold gap size wrong estimation (local) 89491276 89495981 347531 352381 NC_000014.9 velvet.61108 99.98 True fake: scaffold gap size wrong estimation (local) 89496223 89496951 353155 353886 NC_000014.9 velvet.61108 99.59 True fake: scaffold gap size wrong estimation (local) 89497700 89498211 355170 355681 NC_000014.9 velvet.61108 100.0 True fake: scaffold gap size wrong estimation (local) 89498427 89499479 355692 356794 NC_000014.9 velvet.61108 99.9 True relocation, scaffold gap is present, inconsistency = 7949189 97448679 97449213 356805 357339 NC_000014.9 velvet.61108 100.0 True relocation, scaffold gap is present, inconsistency = -8012 97441212 97443146 357350 359284 NC_000014.9 velvet.61108 100.0 True fake: scaffold gap size wrong estimation (local) 97449483 97461007 359295 371603 NC_000014.9 velvet.61108 99.96 True fake: scaffold gap size wrong estimation (local) 97461351 97465218 372772 376639 NC_000014.9 velvet.61108 99.69 True fake: scaffold gap size wrong estimation (local) 97465219 97467135 376918 378834 NC_000014.9 velvet.61108 98.9 True local misassembly 97470305 97472347 378835 380877 NC_000014.9 velvet.61108 99.36 True relocation, scaffold gap is present, inconsistency = -7953858 89518999 89520026 381387 382414 NC_000014.9 velvet.61108 100.0 True relocation, scaffold gap is present, inconsistency = -35809595 53713184 53717183 385167 389113 NC_000014.9 velvet.61108 98.4 True fake: scaffold gap size wrong estimation (local) 53723299 53724395 389445 390541 NC_000014.9 velvet.61108 99.91 True relocation, scaffold gap is present, inconsistency = 12292814 66017220 66018489 391821 390552 NC_000014.9 velvet.61108 99.69 True relocation, scaffold gap is present, inconsistency = -16352 66018541 66019708 408225 409430 NC_000014.9 velvet.61108 99.91 True fake: scaffold gap size wrong estimation (local) 66019970 66026139 410680 416858 NC_000014.9 velvet.61108 99.92 True relocation, scaffold gap is present, inconsistency = -12288857 53737623 53746714 417199 426290 NC_000014.9 velvet.61108 99.78 True fake: scaffold gap size wrong estimation (local) 53746954 53747805 427098 427949 NC_000014.9 velvet.61108 99.77 True fake: scaffold gap size wrong estimation (local) 53748064 53753750 428681 434367 NC_000014.9 velvet.61108 99.68 True fake: scaffold gap size wrong estimation (local) 53754889 53756417 434453 435973 NC_000014.9 velvet.61108 99.21 True fake: scaffold gap size wrong estimation (local) 53757057 53757645 436473 437061 NC_000014.9 velvet.61108 99.83 True fake: not a misassembly (possible transposable element) 97575239 97575814 437243 437818 NC_000014.9 velvet.61108 100.0 True fake: not a misassembly (possible transposable element) 53757985 53761452 438169 441704 NC_000014.9 velvet.61108 97.82 True relocation, scaffold gap is present, inconsistency = 43814353 97575816 97584196 441715 450095 NC_000014.9 velvet.61108 100.0 True relocation, scaffold gap is present, inconsistency = 70217 97504624 97505588 451070 450106 NC_000014.9 velvet.61108 100.0 True inversion, scaffold gap is present 97505895 97507474 452044 453623 NC_000014.9 velvet.61108 99.75 True indel: indel (> 5bp) 97507504 97508392 453677 454612 NC_000014.9 velvet.61108 98.86 True fake: scaffold gap size wrong estimation (local) 97509169 97515534 455474 461908 NC_000014.9 velvet.61108 99.31 True relocation, scaffold gap is present, inconsistency = 43814121 53694467 53695037 462489 461919 NC_000014.9 velvet.61108 99.82 True local misassembly 53695296 53696997 464201 462500 NC_000014.9 velvet.61108 99.88 True relocation, scaffold gap is present, inconsistency = -12472 53705955 53707606 466014 464363 NC_000014.9 velvet.61108 99.76 True relocation, scaffold gap is present, inconsistency = 12345779 66053396 66054881 466025 467552 NC_000014.9 velvet.61108 96.67 True relocation, scaffold gap is present, inconsistency = 12359054 53681446 53694331 480449 467563 NC_000014.9 velvet.61108 99.92 True relocation, scaffold gap is present, inconsistency = 12360716 66055058 66061045 480460 486447 NC_000014.9 velvet.61108 99.98 True relocation, scaffold gap is present, inconsistency = 4581341 61465241 61473706 494960 486458 NC_000014.9 velvet.61108 99.42 True relocation, scaffold gap is present, inconsistency = 7788585 53658128 53676645 514224 494971 NC_000014.9 velvet.61108 99.86 True fake: scaffold gap size wrong estimation (local) 53644385 53645594 525722 524563 NC_000014.9 velvet.61108 95.83 True fake: scaffold gap size wrong estimation (local) 53640614 53644295 529539 525858 NC_000014.9 velvet.61108 99.7 True fake: scaffold gap size wrong estimation (local) 53633436 53640316 537543 530596 NC_000014.9 velvet.61108 99.96 True relocation, scaffold gap is present, inconsistency = 12431543 66071870 66073997 537554 539667 NC_000014.9 velvet.61108 99.34 True inversion, scaffold gap is present 66066603 66071799 544874 539678 NC_000014.9 velvet.61108 99.92 True fake: scaffold gap size wrong estimation (local) 66062841 66066345 549714 545744 NC_000014.9 velvet.61108 99.94 True fake: scaffold gap size wrong estimation (local) 66048303 66053035 570044 565309 NC_000014.9 velvet.61108 99.89 True fake: scaffold gap size wrong estimation (local) 66044542 66048051 574678 570661 NC_000014.9 velvet.61108 99.88 True fake: scaffold gap size wrong estimation (extensive) 66032557 66034755 576887 574689 NC_000014.9 velvet.61108 100.0 True relocation, scaffold gap is present, inconsistency = 106914 66143521 66144973 578739 580203 NC_000014.9 velvet.61108 99.93 True relocation, scaffold gap is present, inconsistency = 12532599 53604490 53610425 586554 580700 NC_000014.9 velvet.61108 98.62 True fake: scaffold gap size wrong estimation (local) 53596720 53604364 595286 587642 NC_000014.9 velvet.61108 99.99 True fake: scaffold gap size wrong estimation (local) 53587042 53596454 605870 596351 NC_000014.9 velvet.61108 99.98 True fake: scaffold gap size wrong estimation (local) 53586008 53586742 607290 606556 NC_000014.9 velvet.61108 98.5 True local misassembly 53578593 53582326 611024 607291 NC_000014.9 velvet.61108 99.84 True fake: scaffold gap size wrong estimation (local) 53577130 53578303 613037 611864 NC_000014.9 velvet.61108 100.0 True relocation, scaffold gap is present, inconsistency = 18182 53540924 53549498 622487 631061 NC_000014.9 velvet.61108 99.94 True relocation, scaffold gap is present, inconsistency = 12913 53565279 53568827 637477 633929 NC_000014.9 velvet.61108 99.97 True fake: scaffold gap size wrong estimation (local) 53555214 53556982 646791 645023 NC_000014.9 velvet.61108 99.83 True fake: scaffold gap size wrong estimation (local) 53549771 53555106 652977 647642 NC_000014.9 velvet.61108 99.96 True CONTIG velvet.61108 652977 misassembled 52479827 52480438 880 269 NC_000014.9 velvet.61123 98.86 True inversion, scaffold gap is present 52509065 52509582 30219 30736 NC_000014.9 velvet.61123 100.0 True relocation, scaffold gap is present, inconsistency = 39284715 91794308 91803401 30747 40588 NC_000014.9 velvet.61123 99.08 True fake: scaffold gap size wrong estimation (local) 91803749 91805426 41902 43579 NC_000014.9 velvet.61123 99.94 True relocation, scaffold gap is present, inconsistency = -39341792 52466891 52468683 46836 48628 NC_000014.9 velvet.61123 99.89 True fake: scaffold gap size wrong estimation (local) 52469765 52472199 50755 53189 NC_000014.9 velvet.61123 100.0 True fake: scaffold gap size wrong estimation (local) 52472505 52474498 54357 56350 NC_000014.9 velvet.61123 99.9 True fake: scaffold gap size wrong estimation (local) 52475475 52477345 58140 60069 NC_000014.9 velvet.61123 99.45 True fake: scaffold gap size wrong estimation (local) 52510018 52515535 86692 92366 NC_000014.9 velvet.61123 99.98 True relocation, scaffold gap is present, inconsistency = 39322891 91838437 91841994 92377 95934 NC_000014.9 velvet.61123 99.92 True fake: scaffold gap size wrong estimation (local) 91842272 91844519 97069 99305 NC_000014.9 velvet.61123 99.33 True relocation, scaffold gap is present, inconsistency = -39328812 52515718 52520363 99316 103961 NC_000014.9 velvet.61123 99.98 True fake: scaffold gap size wrong estimation (local) 52520617 52521130 104676 105189 NC_000014.9 velvet.61123 100.0 True fake: scaffold gap size wrong estimation (local) 52521422 52524723 105798 109099 NC_000014.9 velvet.61123 99.97 True fake: scaffold gap size wrong estimation (local) 52525757 52528854 110982 114183 NC_000014.9 velvet.61123 99.97 True fake: scaffold gap size wrong estimation (local) 52530639 52532473 116989 118823 NC_000014.9 velvet.61123 100.0 True fake: scaffold gap size wrong estimation (local) 52532739 52540372 119927 127539 NC_000014.9 velvet.61123 99.66 True relocation, scaffold gap is present, inconsistency = 17502079 70043770 70049381 128858 134524 NC_000014.9 velvet.61123 99.93 True relocation, scaffold gap is present, inconsistency = 21827733 91877125 91880542 134535 137953 NC_000014.9 velvet.61123 99.77 True fake: scaffold gap size wrong estimation (local) 91880852 91881713 138796 139649 NC_000014.9 velvet.61123 98.49 True fake: scaffold gap size wrong estimation (local) 91882162 91888048 140603 146577 NC_000014.9 velvet.61123 99.73 True relocation, scaffold gap is present, inconsistency = 34843986 57036294 57036925 148459 147828 NC_000014.9 velvet.61123 100.0 True fake: scaffold gap size wrong estimation (local) 57033007 57036189 152346 149164 NC_000014.9 velvet.61123 99.91 True relocation, scaffold gap is present, inconsistency = 34859630 91895830 91897792 152357 154317 NC_000014.9 velvet.61123 99.54 True local misassembly 91894705 91895543 154328 155166 NC_000014.9 velvet.61123 99.88 True fake: scaffold gap size wrong estimation (local) 91897982 91898816 158162 158996 NC_000014.9 velvet.61123 99.64 True relocation, scaffold gap is present, inconsistency = -21849181 70049646 70052608 159007 162093 NC_000014.9 velvet.61123 95.06 True relocation, scaffold gap is present, inconsistency = -17501370 52551509 52553262 162364 164117 NC_000014.9 velvet.61123 99.89 True relocation, scaffold gap is present, inconsistency = 2484930 55038203 55039332 165256 164128 NC_000014.9 velvet.61123 99.91 True relocation, scaffold gap is present, inconsistency = -47861710 102897035 102899902 168134 165267 NC_000014.9 velvet.61123 100.0 True relocation, scaffold gap is present, inconsistency = 42719860 60176309 60176980 169000 168329 NC_000014.9 velvet.61123 100.0 True fake: scaffold gap size wrong estimation (local) 60169139 60172092 172269 169316 NC_000014.9 velvet.61123 100.0 True fake: scaffold gap size wrong estimation (local) 60163364 60169052 178828 173100 NC_000014.9 velvet.61123 99.59 True relocation, scaffold gap is present, inconsistency = 28737006 88906069 88907087 178839 179857 NC_000014.9 velvet.61123 99.9 True fake: scaffold gap size wrong estimation (local) 88907363 88911822 180321 185553 NC_000014.9 velvet.61123 98.58 True fake: scaffold gap size wrong estimation (extensive) 88924751 88926612 207845 209706 NC_000014.9 velvet.61123 99.89 True fake: scaffold gap size wrong estimation (local) 88929523 88932139 209717 212333 NC_000014.9 velvet.61123 99.92 True local misassembly 88928713 88929213 212879 213379 NC_000014.9 velvet.61123 100.0 True fake: scaffold gap size wrong estimation (local) 88932411 88936736 213390 217611 NC_000014.9 velvet.61123 97.6 True relocation, scaffold gap is present, inconsistency = 27661705 61266424 61270695 221786 217622 NC_000014.9 velvet.61123 97.39 True relocation, scaffold gap is present, inconsistency = 13686 61250255 61251044 224269 223480 NC_000014.9 velvet.61123 99.62 True fake: not a misassembly (possible transposable element) 52588410 52590440 226310 224280 NC_000014.9 velvet.61123 100.0 True fake: not a misassembly (possible transposable element) 61248929 61249508 226899 226321 NC_000014.9 velvet.61123 99.66 True fake: scaffold gap size wrong estimation (local) 61247743 61248745 228215 227213 NC_000014.9 velvet.61123 100.0 True fake: not a misassembly (possible transposable element) 52585806 52588190 228226 230610 NC_000014.9 velvet.61123 100.0 True fake: not a misassembly (possible transposable element) 61217357 61227309 264934 254307 NC_000014.9 velvet.61123 99.92 True relocation, scaffold gap is present, inconsistency = -20683 61232495 61236115 271310 266859 NC_000014.9 velvet.61123 99.5 True fake: scaffold gap size wrong estimation (local) 61231641 61232236 272027 271432 NC_000014.9 velvet.61123 99.66 True fake: scaffold gap size wrong estimation (local) 61227715 61231350 276898 273113 NC_000014.9 velvet.61123 99.75 True relocation, scaffold gap is present, inconsistency = 154570 61063078 61073134 276909 287003 NC_000014.9 velvet.61123 99.47 True relocation, scaffold gap is present, inconsistency = 127671 61207111 61209955 296254 293309 NC_000014.9 velvet.61123 99.93 True relocation, scaffold gap is present, inconsistency = 27406 61237372 61242426 296265 301421 NC_000014.9 velvet.61123 99.64 True fake: scaffold gap size wrong estimation (local) 61254581 61261983 307496 314995 NC_000014.9 velvet.61123 100.0 True fake: scaffold gap size wrong estimation (local) 61262183 61266018 316024 319915 NC_000014.9 velvet.61123 99.79 True fake: scaffold gap size wrong estimation (local) 61270728 61271969 326388 327629 NC_000014.9 velvet.61123 99.84 True fake: scaffold gap size wrong estimation (local) 61272659 61276394 329037 332772 NC_000014.9 velvet.61123 100.0 True fake: scaffold gap size wrong estimation (local) 61277213 61283049 334386 340481 NC_000014.9 velvet.61123 99.95 True fake: scaffold gap size wrong estimation (local) 61287745 61288369 340737 341361 NC_000014.9 velvet.61123 100.0 True indel: indel (> 5bp) 61288381 61289453 341431 342503 NC_000014.9 velvet.61123 99.91 True fake: scaffold gap size wrong estimation (local) 61290312 61291337 344080 345105 NC_000014.9 velvet.61123 100.0 True relocation, scaffold gap is present, inconsistency = -7551 61283809 61286537 345128 347856 NC_000014.9 velvet.61123 99.96 True fake: scaffold gap size wrong estimation (local) 61292899 61294153 348571 349825 NC_000014.9 velvet.61123 99.92 True local misassembly 61291631 61292230 350026 350625 NC_000014.9 velvet.61123 100.0 True fake: scaffold gap size wrong estimation (local) 61294407 61294921 353653 354167 NC_000014.9 velvet.61123 100.0 True relocation, scaffold gap is present, inconsistency = 7264472 68559643 68560482 354417 355256 NC_000014.9 velvet.61123 100.0 True relocation, scaffold gap is present, inconsistency = 10720246 57836558 57839386 358095 355267 NC_000014.9 velvet.61123 100.0 True fake: scaffold gap size wrong estimation (local) 57835028 57836327 360311 359012 NC_000014.9 velvet.61123 100.0 True fake: scaffold gap size wrong estimation (local) 57827124 57834733 368841 361156 NC_000014.9 velvet.61123 99.99 True fake: scaffold gap size wrong estimation (local) 57805413 57807806 393848 391459 NC_000014.9 velvet.61123 99.29 True relocation, scaffold gap is present, inconsistency = 7648442 50153914 50156960 393859 396940 NC_000014.9 velvet.61123 99.97 True fake: not a misassembly (possible transposable element) 71514115 71516484 397006 399495 NC_000014.9 velvet.61123 95.18 True fake: not a misassembly (possible transposable element) 50158264 50158942 399506 400184 NC_000014.9 velvet.61123 100.0 True relocation, scaffold gap is present, inconsistency = 7654585 57813538 57819518 406174 400195 NC_000014.9 velvet.61123 99.97 True fake: scaffold gap size wrong estimation (local) 57811944 57813314 408239 406869 NC_000014.9 velvet.61123 100.0 True relocation, scaffold gap is present, inconsistency = 7661337 50148986 50150576 408270 409860 NC_000014.9 velvet.61123 99.94 True local misassembly 50147541 50148158 409871 410488 NC_000014.9 velvet.61123 99.84 True local misassembly 50148431 50148934 410489 410992 NC_000014.9 velvet.61123 98.02 True relocation, scaffold gap is present, inconsistency = 11155452 61305458 61307151 412064 413757 NC_000014.9 velvet.61123 100.0 True relocation, scaffold gap is present, inconsistency = -11170055 50138471 50140949 415132 417580 NC_000014.9 velvet.61123 98.7 True relocation, scaffold gap is present, inconsistency = 11154522 61295896 61299014 418005 421123 NC_000014.9 velvet.61123 99.9 True relocation, scaffold gap is present, inconsistency = 3513953 57779497 57780030 423569 423036 NC_000014.9 velvet.61123 98.13 True fake: scaffold gap size wrong estimation (local) 57768959 57776386 435695 427458 NC_000014.9 velvet.61123 99.96 True relocation, scaffold gap is present, inconsistency = 2167728 55598517 55599542 437384 438409 NC_000014.9 velvet.61123 100.0 True fake: scaffold gap size wrong estimation (local) 55599690 55600887 438510 439707 NC_000014.9 velvet.61123 100.0 True fake: not a misassembly (possible transposable element) 71056939 71060962 443838 439718 NC_000014.9 velvet.61123 99.95 True fake: not a misassembly (possible transposable element) 55603198 55608639 443849 449919 NC_000014.9 velvet.61123 99.71 True fake: scaffold gap size wrong estimation (local) 55609205 55611229 451102 453126 NC_000014.9 velvet.61123 99.9 True relocation, scaffold gap is present, inconsistency = 2142977 57754373 57759307 458454 453293 NC_000014.9 velvet.61123 99.69 True fake: scaffold gap size wrong estimation (local) 57746186 57750394 463115 458908 NC_000014.9 velvet.61123 99.95 True relocation, scaffold gap is present, inconsistency = 45226900 102977368 102978759 463189 464580 NC_000014.9 velvet.61123 100.0 True relocation, scaffold gap is present, inconsistency = 84188 103064936 103066853 468426 466569 NC_000014.9 velvet.61123 96.8 True relocation, scaffold gap is present, inconsistency = 47431039 55631612 55633886 468437 470711 NC_000014.9 velvet.61123 99.96 True fake: scaffold gap size wrong estimation (local) 55634121 55642920 471655 481390 NC_000014.9 velvet.61123 99.94 True fake: scaffold gap size wrong estimation (local) 55643212 55647381 482438 486556 NC_000014.9 velvet.61123 98.73 True fake: scaffold gap size wrong estimation (local) 55647953 55649867 487955 489845 NC_000014.9 velvet.61123 98.73 True fake: scaffold gap size wrong estimation (local) 55650026 55652416 490913 493303 NC_000014.9 velvet.61123 100.0 True relocation, scaffold gap is present, inconsistency = -5510117 50142310 50143492 493314 494497 NC_000014.9 velvet.61123 99.92 True fake: not a misassembly (possible transposable element) 61299023 61301701 494508 497187 NC_000014.9 velvet.61123 99.93 True fake: not a misassembly (possible transposable element) 50144743 50145880 497198 498335 NC_000014.9 velvet.61123 99.91 True fake: not a misassembly (possible transposable element) 61301816 61304570 498346 501043 NC_000014.9 velvet.61123 97.84 True fake: not a misassembly (possible transposable element) 50156996 50158242 504521 505767 NC_000014.9 velvet.61123 100.0 True relocation, scaffold gap is present, inconsistency = 11148428 61307174 61308042 506271 507139 NC_000014.9 velvet.61123 100.0 True indel: indel (<= 5bp) 61308054 61308747 507147 507840 NC_000014.9 velvet.61123 99.86 True local misassembly 61309231 61309896 508133 508798 NC_000014.9 velvet.61123 98.5 True fake: scaffold gap size wrong estimation (local) 61312832 61313701 509088 509957 NC_000014.9 velvet.61123 100.0 True fake: scaffold gap size wrong estimation (local) 61316053 61318110 512700 514685 NC_000014.9 velvet.61123 96.48 True fake: scaffold gap size wrong estimation (local) 61318501 61320345 516019 517812 NC_000014.9 velvet.61123 97.11 True fake: scaffold gap size wrong estimation (extensive) 61340414 61343373 529872 532831 NC_000014.9 velvet.61123 100.0 True fake: scaffold gap size wrong estimation (local) 61345901 61349431 532842 536372 NC_000014.9 velvet.61123 99.94 True fake: scaffold gap size wrong estimation (local) 61352745 61356708 536576 540683 NC_000014.9 velvet.61123 99.13 True fake: scaffold gap size wrong estimation (local) 61356985 61360273 541746 545034 NC_000014.9 velvet.61123 99.82 True fake: scaffold gap size wrong estimation (local) 61360529 61362362 546075 547908 NC_000014.9 velvet.61123 100.0 True relocation, scaffold gap is present, inconsistency = -24950 61337724 61339338 548220 549834 NC_000014.9 velvet.61123 100.0 True fake: scaffold gap size wrong estimation (local) 61343386 61345815 550408 552837 NC_000014.9 velvet.61123 99.88 True relocation, scaffold gap is present, inconsistency = 11167955 50174341 50175420 553927 552848 NC_000014.9 velvet.61123 100.0 True local misassembly 50175429 50176727 555236 553938 NC_000014.9 velvet.61123 100.0 True inversion, scaffold gap is present 50177340 50178445 555473 556578 NC_000014.9 velvet.61123 99.91 True relocation, scaffold gap is present, inconsistency = 5979145 56158655 56161310 557643 560342 NC_000014.9 velvet.61123 99.89 True fake: scaffold gap size wrong estimation (local) 56161572 56162960 561470 562860 NC_000014.9 velvet.61123 99.78 True fake: scaffold gap size wrong estimation (local) 56172040 56173940 567560 569460 NC_000014.9 velvet.61123 99.95 True fake: scaffold gap size wrong estimation (local) 56174204 56188914 569991 585508 NC_000014.9 velvet.61123 99.58 True fake: scaffold gap size wrong estimation (local) 56189072 56191930 586433 589290 NC_000014.9 velvet.61123 99.93 True fake: scaffold gap size wrong estimation (local) 56192165 56197934 590321 596152 NC_000014.9 velvet.61123 99.9 True fake: scaffold gap size wrong estimation (local) 56198019 56201104 596494 599579 NC_000014.9 velvet.61123 99.94 True fake: scaffold gap size wrong estimation (local) 56202366 56203005 601588 602227 NC_000014.9 velvet.61123 99.69 True fake: scaffold gap size wrong estimation (local) 56203453 56204324 602507 603378 NC_000014.9 velvet.61123 99.77 True fake: scaffold gap size wrong estimation (local) 56211288 56213891 605469 608193 NC_000014.9 velvet.61123 99.81 True fake: scaffold gap size wrong estimation (local) 56214156 56217067 609327 612238 NC_000014.9 velvet.61123 99.9 True fake: scaffold gap size wrong estimation (local) 56217068 56222092 613017 618041 NC_000014.9 velvet.61123 98.93 True fake: scaffold gap size wrong estimation (extensive) 56222093 56226084 625494 629485 NC_000014.9 velvet.61123 99.52 True fake: scaffold gap size wrong estimation (local) 56255609 56256189 656734 657314 NC_000014.9 velvet.61123 100.0 True relocation, scaffold gap is present, inconsistency = -22203 56234767 56236118 658095 659446 NC_000014.9 velvet.61123 98.89 True fake: scaffold gap size wrong estimation (local) 56238165 56242648 662121 666604 NC_000014.9 velvet.61123 99.84 True fake: scaffold gap size wrong estimation (local) 56242765 56252708 666708 677596 NC_000014.9 velvet.61123 99.86 True fake: scaffold gap size wrong estimation (local) 56256262 56263036 678974 685892 NC_000014.9 velvet.61123 99.79 True fake: scaffold gap size wrong estimation (local) 56263261 56275625 686886 699368 NC_000014.9 velvet.61123 98.79 True fake: scaffold gap size wrong estimation (local) 56276851 56281355 701088 705647 NC_000014.9 velvet.61123 99.89 True fake: scaffold gap size wrong estimation (local) 56281387 56302198 706388 727496 NC_000014.9 velvet.61123 99.93 True fake: not a misassembly (possible transposable element) 56275688 56276808 727507 728627 NC_000014.9 velvet.61123 99.91 True fake: not a misassembly (possible transposable element) 56318794 56319504 740850 741560 NC_000014.9 velvet.61123 99.72 True local misassembly 56317674 56318497 741792 742615 NC_000014.9 velvet.61123 100.0 True fake: scaffold gap size wrong estimation (local) 56319519 56326474 743415 750385 NC_000014.9 velvet.61123 99.6 True fake: scaffold gap size wrong estimation (local) 56326759 56327275 751245 751761 NC_000014.9 velvet.61123 100.0 True fake: scaffold gap size wrong estimation (local) 56337822 56342590 755653 760421 NC_000014.9 velvet.61123 99.98 True fake: scaffold gap size wrong estimation (local) 56348031 56355153 768109 775427 NC_000014.9 velvet.61123 99.69 True fake: scaffold gap size wrong estimation (local) 56355405 56357897 776458 778950 NC_000014.9 velvet.61123 99.8 True relocation, scaffold gap is present, inconsistency = -15298 56342610 56343440 778961 779791 NC_000014.9 velvet.61123 99.88 True local misassembly 56343725 56344817 779792 780884 NC_000014.9 velvet.61123 99.09 True fake: not a misassembly (possible transposable element) 56358000 56359622 780895 782517 NC_000014.9 velvet.61123 100.0 True fake: not a misassembly (possible transposable element) 56345152 56345933 782815 783596 NC_000014.9 velvet.61123 99.87 True fake: scaffold gap size wrong estimation (local) 56347211 56347784 784489 785062 NC_000014.9 velvet.61123 98.26 True relocation, scaffold gap is present, inconsistency = 13168 56364544 56365206 788654 789315 NC_000014.9 velvet.61123 98.94 True fake: scaffold gap size wrong estimation (local) 56365146 56365698 790982 791534 NC_000014.9 velvet.61123 99.82 True fake: scaffold gap size wrong estimation (local) 56365973 56368122 792681 794818 NC_000014.9 velvet.61123 99.39 True fake: scaffold gap size wrong estimation (local) 56373285 56382250 796571 806965 NC_000014.9 velvet.61123 99.89 True fake: scaffold gap size wrong estimation (local) 56382354 56383221 807620 808492 NC_000014.9 velvet.61123 100.0 True relocation, scaffold gap is present, inconsistency = -13130 56387339 56391928 825740 830329 NC_000014.9 velvet.61123 99.91 True fake: scaffold gap size wrong estimation (local) 56392465 56393701 831657 832893 NC_000014.9 velvet.61123 100.0 True fake: scaffold gap size wrong estimation (local) 56394994 56396032 835100 836117 NC_000014.9 velvet.61123 97.76 True fake: not a misassembly (possible transposable element) 58225056 58225724 837860 838528 NC_000014.9 velvet.61123 100.0 True fake: not a misassembly (possible transposable element) 56397840 56401262 838539 842028 NC_000014.9 velvet.61123 98.28 True fake: scaffold gap size wrong estimation (local) 56401551 56402880 843161 844490 NC_000014.9 velvet.61123 99.77 True fake: scaffold gap size wrong estimation (local) 56404961 56405569 847172 847777 NC_000014.9 velvet.61123 99.51 True CONTIG velvet.61123 847914 misassembled 93560863 93561590 1029 302 NC_000014.9 velvet.61124 99.31 True fake: scaffold gap size wrong estimation (local) 93558616 93559404 3438 2650 NC_000014.9 velvet.61124 100.0 True fake: scaffold gap size wrong estimation (local) 93555594 93558270 7912 4697 NC_000014.9 velvet.61124 99.89 True fake: scaffold gap size wrong estimation (local) 93554356 93555416 9227 8171 NC_000014.9 velvet.61124 99.43 True fake: scaffold gap size wrong estimation (local) 93551321 93554072 13084 10333 NC_000014.9 velvet.61124 99.85 True fake: scaffold gap size wrong estimation (local) 93547964 93550316 17438 15086 NC_000014.9 velvet.61124 99.87 True fake: scaffold gap size wrong estimation (local) 93543027 93547718 23252 18483 NC_000014.9 velvet.61124 99.25 True relocation, scaffold gap is present, inconsistency = 213441 93761370 93768823 23463 30916 NC_000014.9 velvet.61124 99.93 True fake: scaffold gap size wrong estimation (local) 93769023 93773838 31895 36707 NC_000014.9 velvet.61124 99.5 True fake: scaffold gap size wrong estimation (local) 93773923 93777369 37581 41026 NC_000014.9 velvet.61124 99.97 True CONTIG velvet.61124 42479 misassembled 63467222 63469406 4327 2143 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 63465531 63466941 6543 5086 NC_000014.9 velvet.61136 100.0 True relocation, scaffold gap is present, inconsistency = 12980296 50481094 50482531 9247 10683 NC_000014.9 velvet.61136 99.79 True fake: scaffold gap size wrong estimation (local) 50482755 50483741 11096 12082 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 50484129 50486678 13291 15840 NC_000014.9 velvet.61136 99.92 True fake: scaffold gap size wrong estimation (local) 50487316 50488230 17097 18009 NC_000014.9 velvet.61136 99.02 True fake: scaffold gap size wrong estimation (local) 50488392 50490099 18491 20159 NC_000014.9 velvet.61136 97.7 True fake: scaffold gap size wrong estimation (local) 50490218 50491339 20704 21825 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 50491836 50492403 22882 23445 NC_000014.9 velvet.61136 99.12 True fake: scaffold gap size wrong estimation (local) 50493244 50493793 24298 24847 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 50494463 50496072 26725 28334 NC_000014.9 velvet.61136 99.94 True fake: scaffold gap size wrong estimation (local) 50526599 50527109 55762 56272 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 50527319 50527838 56686 57370 NC_000014.9 velvet.61136 99.79 True fake: scaffold gap size wrong estimation (local) 50528589 50529242 58224 58877 NC_000014.9 velvet.61136 100.0 True local misassembly 50527863 50528422 58888 59447 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 50529655 50530827 59999 61171 NC_000014.9 velvet.61136 99.74 True indel: indel (<= 5bp) 50530833 50532522 61172 62861 NC_000014.9 velvet.61136 99.64 True fake: scaffold gap size wrong estimation (local) 50532523 50533752 62959 64188 NC_000014.9 velvet.61136 99.51 True indel: indel (> 5bp) 50533804 50535598 64189 65983 NC_000014.9 velvet.61136 99.83 True fake: scaffold gap size wrong estimation (local) 50536633 50537151 67907 68423 NC_000014.9 velvet.61136 98.65 True fake: scaffold gap size wrong estimation (local) 50537372 50541764 68637 73042 NC_000014.9 velvet.61136 98.35 True fake: scaffold gap size wrong estimation (local) 50542057 50544704 74137 76831 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 50556522 50558265 84845 86588 NC_000014.9 velvet.61136 99.94 True fake: scaffold gap size wrong estimation (local) 50558351 50562079 86757 90485 NC_000014.9 velvet.61136 100.0 True relocation, scaffold gap is present, inconsistency = -8828 50553603 50555275 90837 92441 NC_000014.9 velvet.61136 95.29 True fake: scaffold gap size wrong estimation (local) 50562336 50564396 98209 100269 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 50565514 50566035 102297 102818 NC_000014.9 velvet.61136 100.0 True fake: not a misassembly (possible transposable element) 50572924 50577065 112602 108264 NC_000014.9 velvet.61136 99.78 True fake: not a misassembly (possible transposable element) 50577279 50582036 112613 117370 NC_000014.9 velvet.61136 99.89 True fake: scaffold gap size wrong estimation (local) 50582716 50584215 118777 120276 NC_000014.9 velvet.61136 99.87 True fake: scaffold gap size wrong estimation (local) 50584752 50589164 121604 126019 NC_000014.9 velvet.61136 95.75 True fake: scaffold gap size wrong estimation (local) 50589459 50592647 127055 130244 NC_000014.9 velvet.61136 99.84 True fake: scaffold gap size wrong estimation (local) 50592977 50594742 131341 133103 NC_000014.9 velvet.61136 99.6 True fake: scaffold gap size wrong estimation (local) 50595030 50596959 134233 136154 NC_000014.9 velvet.61136 99.48 True inversion, scaffold gap is present 50598636 50600906 138520 136165 NC_000014.9 velvet.61136 100.0 True relocation, scaffold gap is present, inconsistency = -8159 50601070 50616274 146843 162047 NC_000014.9 velvet.61136 99.88 True relocation, scaffold gap is present, inconsistency = 39514254 90131532 90132290 163051 163809 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 90132575 90136524 164681 168628 NC_000014.9 velvet.61136 99.87 True relocation, scaffold gap is present, inconsistency = 69069861 21061128 21062703 170214 168639 NC_000014.9 velvet.61136 99.87 True relocation, scaffold gap is present, inconsistency = 72773971 93836882 93837713 170422 171253 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 93837964 93839098 171842 172976 NC_000014.9 velvet.61136 99.91 True relocation, scaffold gap is present, inconsistency = -10951 93828158 93831754 172987 176611 NC_000014.9 velvet.61136 98.87 True fake: scaffold gap size wrong estimation (local) 93831989 93836857 177666 182470 NC_000014.9 velvet.61136 98.56 True relocation, scaffold gap is present, inconsistency = -43220299 50616569 50618858 182481 184770 NC_000014.9 velvet.61136 99.78 True fake: scaffold gap size wrong estimation (local) 50620255 50622305 186884 188934 NC_000014.9 velvet.61136 99.9 True fake: scaffold gap size wrong estimation (local) 50622675 50623384 190131 190840 NC_000014.9 velvet.61136 99.86 True local misassembly 50624051 50624825 191253 192027 NC_000014.9 velvet.61136 98.19 True fake: scaffold gap size wrong estimation (extensive) 50634650 50635775 192479 193595 NC_000014.9 velvet.61136 98.92 True fake: scaffold gap size wrong estimation (local) 50635922 50638807 194460 197390 NC_000014.9 velvet.61136 99.9 True fake: scaffold gap size wrong estimation (local) 50639371 50640038 198677 199344 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 50640388 50641401 199698 200711 NC_000014.9 velvet.61136 96.65 True relocation, scaffold gap is present, inconsistency = -18380 50625933 50626891 203623 204581 NC_000014.9 velvet.61136 99.79 True fake: scaffold gap size wrong estimation (local) 50627226 50628771 205903 207448 NC_000014.9 velvet.61136 99.35 True fake: scaffold gap size wrong estimation (local) 50629585 50631002 208760 210182 NC_000014.9 velvet.61136 99.58 True fake: scaffold gap size wrong estimation (local) 50631222 50634350 211044 214172 NC_000014.9 velvet.61136 99.97 True relocation, scaffold gap is present, inconsistency = 39492186 90126832 90127469 214468 215105 NC_000014.9 velvet.61136 99.84 True fake: scaffold gap size wrong estimation (local) 90127848 90130206 216300 218658 NC_000014.9 velvet.61136 99.92 True fake: scaffold gap size wrong estimation (local) 90136546 90137320 219923 220697 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 90137613 90139477 221614 223478 NC_000014.9 velvet.61136 99.89 True fake: scaffold gap size wrong estimation (local) 90139943 90141542 224703 226302 NC_000014.9 velvet.61136 99.25 True fake: scaffold gap size wrong estimation (local) 90142608 90143174 228270 228836 NC_000014.9 velvet.61136 100.0 True local misassembly 90143337 90144394 228837 229894 NC_000014.9 velvet.61136 98.87 True fake: scaffold gap size wrong estimation (local) 90145864 90146370 232426 232932 NC_000014.9 velvet.61136 98.03 True relocation, scaffold gap is present, inconsistency = 3709004 93855385 93858023 232943 235581 NC_000014.9 velvet.61136 99.85 True relocation, scaffold gap is present, inconsistency = -11135 93846899 93848315 235592 237008 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 93848550 93855126 237778 244354 NC_000014.9 velvet.61136 98.28 True fake: scaffold gap size wrong estimation (local) 93858357 93863714 244365 249722 NC_000014.9 velvet.61136 99.83 True fake: scaffold gap size wrong estimation (local) 93864081 93866216 253756 255891 NC_000014.9 velvet.61136 99.91 True fake: scaffold gap size wrong estimation (local) 93871068 93874355 255940 259255 NC_000014.9 velvet.61136 99.07 True relocation, scaffold gap is present, inconsistency = 47871122 45998375 45999808 260826 259393 NC_000014.9 velvet.61136 99.86 True fake: scaffold gap size wrong estimation (local) 45997289 45998292 261953 260950 NC_000014.9 velvet.61136 99.8 True relocation, scaffold gap is present, inconsistency = 49561806 95561435 95563315 263290 265170 NC_000014.9 velvet.61136 99.57 True relocation, scaffold gap is present, inconsistency = -1687982 93875344 93877264 265181 267101 NC_000014.9 velvet.61136 99.9 True fake: scaffold gap size wrong estimation (local) 93882486 93883736 267872 269122 NC_000014.9 velvet.61136 99.92 True relocation, scaffold gap is present, inconsistency = -9700 93874544 93875267 269630 270353 NC_000014.9 velvet.61136 99.59 True fake: scaffold gap size wrong estimation (extensive) 93887154 93888137 274555 275538 NC_000014.9 velvet.61136 99.59 True relocation, scaffold gap is present, inconsistency = 47905315 45963369 45965747 294014 291630 NC_000014.9 velvet.61136 99.96 True relocation, scaffold gap is present, inconsistency = 44202643 90168401 90170246 294025 295908 NC_000014.9 velvet.61136 99.55 True local misassembly 90166725 90168126 295919 297320 NC_000014.9 velvet.61136 99.93 True local misassembly 90161999 90163706 297331 299038 NC_000014.9 velvet.61136 99.94 True fake: scaffold gap size wrong estimation (extensive) 90172348 90173243 299092 299987 NC_000014.9 velvet.61136 100.0 True indel: indel (> 5bp) 90173323 90173840 299988 300505 NC_000014.9 velvet.61136 98.07 True relocation, scaffold gap is present, inconsistency = 3696286 93870236 93871050 300615 301429 NC_000014.9 velvet.61136 99.75 True fake: scaffold gap size wrong estimation (local) 93901839 93902437 325262 325860 NC_000014.9 velvet.61136 99.67 True fake: scaffold gap size wrong estimation (local) 93902695 93907298 326633 331236 NC_000014.9 velvet.61136 99.83 True fake: scaffold gap size wrong estimation (local) 93907677 93922456 332433 347149 NC_000014.9 velvet.61136 99.42 True fake: scaffold gap size wrong estimation (local) 93923277 93938256 348793 364831 NC_000014.9 velvet.61136 99.87 True fake: scaffold gap size wrong estimation (local) 93938544 93943389 365966 370811 NC_000014.9 velvet.61136 99.88 True fake: scaffold gap size wrong estimation (local) 93943632 93947749 371901 376018 NC_000014.9 velvet.61136 99.95 True fake: scaffold gap size wrong estimation (local) 93948107 93948689 377116 377698 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 93948932 93962129 378754 391918 NC_000014.9 velvet.61136 99.53 True relocation, scaffold gap is present, inconsistency = 2051195 96027505 96031164 409758 406099 NC_000014.9 velvet.61136 99.07 True fake: scaffold gap size wrong estimation (local) 96020448 96027504 416955 409899 NC_000014.9 velvet.61136 99.9 True fake: scaffold gap size wrong estimation (local) 96018182 96020207 419961 417936 NC_000014.9 velvet.61136 99.8 True fake: scaffold gap size wrong estimation (local) 96015004 96018061 424900 421843 NC_000014.9 velvet.61136 99.84 True relocation, scaffold gap is present, inconsistency = 25656374 70357197 70358300 425230 426333 NC_000014.9 velvet.61136 99.64 True fake: scaffold gap size wrong estimation (local) 70358412 70360040 426515 428143 NC_000014.9 velvet.61136 100.0 True relocation, scaffold gap is present, inconsistency = 23642824 94002875 94006130 431409 428154 NC_000014.9 velvet.61136 99.94 True fake: scaffold gap size wrong estimation (local) 93988554 94002414 446543 432681 NC_000014.9 velvet.61136 99.98 True relocation, scaffold gap is present, inconsistency = -8046153 102032812 102034696 448438 446554 NC_000014.9 velvet.61136 100.0 True local misassembly 102035217 102036831 450063 448449 NC_000014.9 velvet.61136 100.0 True relocation, scaffold gap is present, inconsistency = 31660247 70371696 70374959 450074 453334 NC_000014.9 velvet.61136 99.72 True relocation, scaffold gap is present, inconsistency = 23610760 93985736 93986354 453351 453969 NC_000014.9 velvet.61136 100.0 True local misassembly 93986588 93988523 454083 456018 NC_000014.9 velvet.61136 99.33 True relocation, scaffold gap is present, inconsistency = -8485 93980053 93984523 456033 460530 NC_000014.9 velvet.61136 96.04 True inversion, scaffold gap is present 93984495 93985270 461330 460555 NC_000014.9 velvet.61136 100.0 True relocation, scaffold gap is present, inconsistency = 23628097 70354870 70356387 461341 462858 NC_000014.9 velvet.61136 99.93 True relocation, scaffold gap is present, inconsistency = 15371540 85727938 85729662 462869 464593 NC_000014.9 velvet.61136 99.94 True fake: scaffold gap size wrong estimation (local) 85729968 85732510 465698 468190 NC_000014.9 velvet.61136 97.87 True relocation, scaffold gap is present, inconsistency = 42198488 43526501 43531054 473169 468616 NC_000014.9 velvet.61136 99.96 True relocation, scaffold gap is present, inconsistency = -58504350 102028479 102030840 475541 473180 NC_000014.9 velvet.61136 100.0 True local misassembly 102031911 102032675 476316 475552 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 102026112 102028228 478443 476327 NC_000014.9 velvet.61136 99.95 True relocation, scaffold gap is present, inconsistency = 80642048 21380413 21381620 480887 482094 NC_000014.9 velvet.61136 99.92 True fake: scaffold gap size wrong estimation (local) 21381872 21386584 482966 487984 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 21387812 21388512 490090 490790 NC_000014.9 velvet.61136 100.0 True relocation, scaffold gap is present, inconsistency = 59700739 81089262 81090030 491569 490801 NC_000014.9 velvet.61136 100.0 True relocation, scaffold gap is present, inconsistency = 59681912 21404389 21404845 494575 494074 NC_000014.9 velvet.61136 99.32 True relocation, scaffold gap is present, inconsistency = 8273 21390803 21396105 494586 500010 NC_000014.9 velvet.61136 99.94 True inversion, scaffold gap is present 21401841 21403809 501989 500021 NC_000014.9 velvet.61136 99.95 True fake: scaffold gap size wrong estimation (local) 21398504 21401526 506167 503145 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 21396747 21398225 508666 507130 NC_000014.9 velvet.61136 96.03 True inversion, scaffold gap is present 21404938 21407649 509408 512119 NC_000014.9 velvet.61136 99.93 True fake: scaffold gap size wrong estimation (local) 21407909 21411823 513190 517104 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (extensive) 21419547 21420778 517115 518346 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 21421060 21422163 519354 520457 NC_000014.9 velvet.61136 99.91 True relocation, scaffold gap is present, inconsistency = 68505844 89928076 89928749 520526 521199 NC_000014.9 velvet.61136 99.55 True fake: scaffold gap size wrong estimation (local) 89929664 89932024 522977 525337 NC_000014.9 velvet.61136 99.75 True relocation, scaffold gap is present, inconsistency = 68556693 21371142 21372960 527166 525348 NC_000014.9 velvet.61136 99.95 True relocation, scaffold gap is present, inconsistency = 55463 21430209 21434065 528952 532808 NC_000014.9 velvet.61136 99.97 True fake: scaffold gap size wrong estimation (local) 21434246 21438114 533705 537563 NC_000014.9 velvet.61136 99.74 True relocation, scaffold gap is present, inconsistency = -25690 21412435 21413411 537574 538550 NC_000014.9 velvet.61136 100.0 True relocation, scaffold gap is present, inconsistency = 10282 21423704 21424521 538561 539378 NC_000014.9 velvet.61136 99.88 True local misassembly 21424761 21425341 539379 539959 NC_000014.9 velvet.61136 98.28 True fake: scaffold gap size wrong estimation (local) 21425813 21427414 541548 543149 NC_000014.9 velvet.61136 100.0 True local misassembly 21427824 21429809 543150 545135 NC_000014.9 velvet.61136 99.9 True fake: not a misassembly (possible transposable element) 89951927 89953220 565999 567292 NC_000014.9 velvet.61136 100.0 True fake: not a misassembly (possible transposable element) 21454617 21456915 567303 569601 NC_000014.9 velvet.61136 99.91 True fake: scaffold gap size wrong estimation (local) 21458015 21460329 571484 573798 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 21460908 21462587 575156 576833 NC_000014.9 velvet.61136 99.82 True relocation, scaffold gap is present, inconsistency = 22549561 44015275 44020591 585276 579960 NC_000014.9 velvet.61136 99.92 True fake: scaffold gap size wrong estimation (local) 44013456 44014250 587939 587145 NC_000014.9 velvet.61136 99.5 True fake: scaffold gap size wrong estimation (local) 44012286 44013012 589234 588508 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 44005335 44011812 597556 590264 NC_000014.9 velvet.61136 99.3 True fake: scaffold gap size wrong estimation (local) 44004270 44005191 599285 598364 NC_000014.9 velvet.61136 99.78 True fake: scaffold gap size wrong estimation (local) 44001580 44004130 602714 600168 NC_000014.9 velvet.61136 99.65 True fake: scaffold gap size wrong estimation (local) 43998974 44001233 606060 603845 NC_000014.9 velvet.61136 97.96 True fake: scaffold gap size wrong estimation (local) 43996343 43998446 609479 607399 NC_000014.9 velvet.61136 98.47 True fake: scaffold gap size wrong estimation (local) 43989205 43996170 617525 610417 NC_000014.9 velvet.61136 99.91 True fake: scaffold gap size wrong estimation (local) 43986652 43988764 620890 618778 NC_000014.9 velvet.61136 99.86 True relocation, scaffold gap is present, inconsistency = 32664245 76653020 76653535 620901 621416 NC_000014.9 velvet.61136 100.0 True relocation, scaffold gap is present, inconsistency = -14618 76638928 76642182 621427 624681 NC_000014.9 velvet.61136 99.91 True relocation, scaffold gap is present, inconsistency = 13297849 89940042 89941637 624692 626287 NC_000014.9 velvet.61136 99.87 True fake: not a misassembly (possible transposable element) 21447674 21448622 626298 627246 NC_000014.9 velvet.61136 100.0 True fake: not a misassembly (possible transposable element) 89942225 89943261 627868 628904 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 89943499 89944160 628988 629649 NC_000014.9 velvet.61136 98.49 True relocation, scaffold gap is present, inconsistency = -68497948 21446530 21447388 629967 630825 NC_000014.9 velvet.61136 99.88 True fake: scaffold gap size wrong estimation (local) 21449172 21451317 633372 635517 NC_000014.9 velvet.61136 100.0 True relocation, scaffold gap is present, inconsistency = 68493005 89946202 89948449 637397 639539 NC_000014.9 velvet.61136 95.31 True relocation, scaffold gap is present, inconsistency = 45960205 43984139 43985986 641397 639550 NC_000014.9 velvet.61136 99.78 True local misassembly 43986026 43986620 642001 641408 NC_000014.9 velvet.61136 99.66 True fake: scaffold gap size wrong estimation (local) 43978371 43983864 651178 644866 NC_000014.9 velvet.61136 96.29 True relocation, scaffold gap is present, inconsistency = 32692514 76676389 76677627 651189 652428 NC_000014.9 velvet.61136 99.6 True fake: scaffold gap size wrong estimation (local) 76677649 76678217 653834 654390 NC_000014.9 velvet.61136 97.72 True fake: scaffold gap size wrong estimation (local) 76678597 76679143 654648 655198 NC_000014.9 velvet.61136 98.91 True fake: not a misassembly (possible transposable element) 43977123 43978349 657150 655880 NC_000014.9 velvet.61136 99.09 True fake: not a misassembly (possible transposable element) 76680805 76682241 658420 659856 NC_000014.9 velvet.61136 99.23 True fake: scaffold gap size wrong estimation (local) 76682242 76684060 659973 661791 NC_000014.9 velvet.61136 98.19 True fake: not a misassembly (possible transposable element) 85488216 85490774 662999 665557 NC_000014.9 velvet.61136 100.0 True fake: not a misassembly (possible transposable element) 76684661 76685881 665568 666793 NC_000014.9 velvet.61136 99.43 True fake: scaffold gap size wrong estimation (local) 76686086 76691369 667631 672909 NC_000014.9 velvet.61136 99.6 True relocation, scaffold gap is present, inconsistency = 8813597 85506628 85508775 674571 676718 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 85508988 85509956 677657 678625 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 85510199 85513211 678819 682334 NC_000014.9 velvet.61136 96.18 True fake: scaffold gap size wrong estimation (local) 85513328 85518713 683236 688708 NC_000014.9 velvet.61136 99.81 True fake: not a misassembly (possible transposable element) 76719307 76720863 694272 695828 NC_000014.9 velvet.61136 100.0 True fake: not a misassembly (possible transposable element) 85519156 85522189 696021 699114 NC_000014.9 velvet.61136 99.87 True fake: scaffold gap size wrong estimation (local) 85522447 85526466 700140 704159 NC_000014.9 velvet.61136 99.93 True fake: scaffold gap size wrong estimation (local) 85526924 85547336 705404 728054 NC_000014.9 velvet.61136 99.88 True fake: scaffold gap size wrong estimation (local) 85547619 85555319 729120 737700 NC_000014.9 velvet.61136 99.65 True fake: scaffold gap size wrong estimation (local) 85555839 85556870 738825 739856 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 85574683 85577589 752513 756070 NC_000014.9 velvet.61136 99.9 True relocation, scaffold gap is present, inconsistency = -12056 85566810 85567656 757347 758173 NC_000014.9 velvet.61136 97.25 True fake: scaffold gap size wrong estimation (local) 85567906 85570580 758789 761463 NC_000014.9 velvet.61136 99.7 True fake: scaffold gap size wrong estimation (local) 85570897 85574660 762524 766287 NC_000014.9 velvet.61136 99.97 True relocation, scaffold gap is present, inconsistency = -13177 85579956 85586706 784760 791510 NC_000014.9 velvet.61136 99.88 True fake: scaffold gap size wrong estimation (local) 85590878 85592145 791521 792788 NC_000014.9 velvet.61136 99.84 True local misassembly 85590091 85590639 792799 793347 NC_000014.9 velvet.61136 99.45 True fake: scaffold gap size wrong estimation (local) 85592840 85593481 796269 796910 NC_000014.9 velvet.61136 100.0 True relocation, scaffold gap is present, inconsistency = 9783869 75806245 75808960 799655 796921 NC_000014.9 velvet.61136 98.92 True fake: scaffold gap size wrong estimation (local) 75799963 75800800 802207 801370 NC_000014.9 velvet.61136 99.64 True local misassembly 75800828 75806014 807404 802218 NC_000014.9 velvet.61136 99.96 True fake: scaffold gap size wrong estimation (local) 75796337 75796892 807970 807415 NC_000014.9 velvet.61136 98.38 True fake: scaffold gap size wrong estimation (local) 75792359 75795632 812779 809642 NC_000014.9 velvet.61136 95.49 True fake: scaffold gap size wrong estimation (local) 75791106 75791941 816193 815358 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 75787096 75790454 820784 817426 NC_000014.9 velvet.61136 99.97 True fake: scaffold gap size wrong estimation (local) 75785452 75786865 822988 821575 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 75781884 75785169 827084 823800 NC_000014.9 velvet.61136 99.88 True fake: scaffold gap size wrong estimation (local) 75773976 75781667 836316 828120 NC_000014.9 velvet.61136 99.88 True fake: scaffold gap size wrong estimation (local) 75772925 75773604 837586 836907 NC_000014.9 velvet.61136 99.85 True fake: scaffold gap size wrong estimation (local) 75771403 75772654 839654 838282 NC_000014.9 velvet.61136 99.92 True relocation, scaffold gap is present, inconsistency = 9831200 85603865 85605497 839665 841297 NC_000014.9 velvet.61136 99.82 True relocation, scaffold gap is present, inconsistency = 142421 85747929 85762464 858005 841308 NC_000014.9 velvet.61136 97.96 True fake: scaffold gap size wrong estimation (local) 85738561 85747288 868410 859379 NC_000014.9 velvet.61136 99.8 True fake: not a misassembly (possible transposable element) 85715748 85719126 879433 875994 NC_000014.9 velvet.61136 99.17 True fake: not a misassembly (possible transposable element) 85719357 85724870 888671 882497 NC_000014.9 velvet.61136 99.93 True relocation, scaffold gap is present, inconsistency = 24049401 61667867 61669945 888682 890759 NC_000014.9 velvet.61136 99.81 True fake: scaffold gap size wrong estimation (local) 61670573 61671735 892245 893407 NC_000014.9 velvet.61136 99.66 True local misassembly 61666980 61667759 893743 894522 NC_000014.9 velvet.61136 99.74 True fake: scaffold gap size wrong estimation (local) 61672789 61674151 898901 900263 NC_000014.9 velvet.61136 99.85 True relocation, scaffold gap is present, inconsistency = 28151276 33501632 33521502 920519 900274 NC_000014.9 velvet.61136 99.71 True relocation, scaffold gap is present, inconsistency = 52112156 85633831 85636670 920692 923579 NC_000014.9 velvet.61136 99.86 True fake: scaffold gap size wrong estimation (local) 85636966 85639847 924616 927497 NC_000014.9 velvet.61136 99.97 True fake: scaffold gap size wrong estimation (local) 85640153 85643312 928553 932155 NC_000014.9 velvet.61136 99.36 True fake: scaffold gap size wrong estimation (local) 85643683 85646648 932791 936208 NC_000014.9 velvet.61136 98.17 True fake: scaffold gap size wrong estimation (local) 85649358 85652528 939240 942406 NC_000014.9 velvet.61136 99.65 True relocation, scaffold gap is present, inconsistency = 52169530 33452777 33479739 969691 942495 NC_000014.9 velvet.61136 99.86 True fake: scaffold gap size wrong estimation (local) 33446449 33452490 976793 970752 NC_000014.9 velvet.61136 99.88 True relocation, scaffold gap is present, inconsistency = 12503 33421578 33433935 976804 989161 NC_000014.9 velvet.61136 99.98 True fake: scaffold gap size wrong estimation (local) 33434556 33439109 990553 995106 NC_000014.9 velvet.61136 99.98 True inversion, scaffold gap is present 33442758 33446159 998635 995234 NC_000014.9 velvet.61136 100.0 True fake: not a misassembly (possible transposable element) 26346841 26347630 999007 999796 NC_000014.9 velvet.61136 99.87 True fake: not a misassembly (possible transposable element) 33441789 33442397 1000517 999909 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (extensive) 33440839 33441370 1010766 1010235 NC_000014.9 velvet.61136 100.0 True relocation, scaffold gap is present, inconsistency = 7089338 26348025 26350810 1011457 1014242 NC_000014.9 velvet.61136 99.89 True fake: scaffold gap size wrong estimation (local) 26351095 26352542 1015304 1016751 NC_000014.9 velvet.61136 99.86 True relocation, scaffold gap is present, inconsistency = 7085363 33439101 33439801 1018647 1017947 NC_000014.9 velvet.61136 100.0 True relocation, scaffold gap is present, inconsistency = 69858282 103298270 103298875 1018834 1019439 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 103299150 103299881 1019596 1020327 NC_000014.9 velvet.61136 98.63 True relocation, scaffold gap is present, inconsistency = -76946659 26354064 26359936 1021169 1027838 NC_000014.9 velvet.61136 99.97 True fake: scaffold gap size wrong estimation (local) 26368374 26368953 1042446 1043025 NC_000014.9 velvet.61136 99.83 True fake: scaffold gap size wrong estimation (local) 26369237 26370969 1043834 1045565 NC_000014.9 velvet.61136 99.83 True relocation, scaffold gap is present, inconsistency = 76958029 103331494 103332910 1048061 1049477 NC_000014.9 velvet.61136 100.0 True fake: not a misassembly (possible transposable element) 26384125 26386381 1049488 1051744 NC_000014.9 velvet.61136 99.91 True fake: not a misassembly (possible transposable element) 103333193 103334523 1051755 1053085 NC_000014.9 velvet.61136 99.85 True relocation, scaffold gap is present, inconsistency = -76951501 26383033 26383829 1053096 1053892 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 26386645 26396724 1054102 1064289 NC_000014.9 velvet.61136 99.97 True fake: scaffold gap size wrong estimation (local) 26396957 26402547 1065335 1070917 NC_000014.9 velvet.61136 99.68 True fake: scaffold gap size wrong estimation (local) 26402636 26409191 1071782 1078337 NC_000014.9 velvet.61136 99.91 True fake: scaffold gap size wrong estimation (local) 26409453 26423448 1079478 1093471 NC_000014.9 velvet.61136 99.96 True fake: scaffold gap size wrong estimation (local) 26424254 26430356 1095084 1101186 NC_000014.9 velvet.61136 99.95 True fake: scaffold gap size wrong estimation (local) 26430652 26435155 1102262 1106888 NC_000014.9 velvet.61136 99.76 True indel: indel (> 5bp) 26435212 26436039 1107001 1107828 NC_000014.9 velvet.61136 99.88 True fake: scaffold gap size wrong estimation (local) 26436611 26440825 1109175 1113392 NC_000014.9 velvet.61136 99.93 True fake: scaffold gap size wrong estimation (local) 26441111 26451380 1114427 1124858 NC_000014.9 velvet.61136 99.92 True fake: scaffold gap size wrong estimation (local) 26451629 26453192 1125921 1127484 NC_000014.9 velvet.61136 99.94 True fake: scaffold gap size wrong estimation (local) 26453369 26461675 1128163 1136599 NC_000014.9 velvet.61136 99.36 True fake: scaffold gap size wrong estimation (local) 26461961 26465209 1137702 1140949 NC_000014.9 velvet.61136 99.91 True fake: scaffold gap size wrong estimation (local) 26465473 26476732 1141972 1153400 NC_000014.9 velvet.61136 98.99 True fake: scaffold gap size wrong estimation (local) 26477033 26482729 1154484 1160227 NC_000014.9 velvet.61136 99.98 True fake: scaffold gap size wrong estimation (local) 26497386 26498112 1169388 1170114 NC_000014.9 velvet.61136 100.0 True fake: scaffold gap size wrong estimation (local) 26498369 26506641 1171273 1179911 NC_000014.9 velvet.61136 99.29 True CONTIG velvet.61136 1179911 misassembled 36569986 36570690 3498 4202 NC_000014.9 velvet.61143 99.86 True relocation, scaffold gap is present, inconsistency = 15335 36589220 36590173 8350 7397 NC_000014.9 velvet.61143 99.79 True relocation, scaffold gap is present, inconsistency = 1819053 34743972 34746373 32144 34543 NC_000014.9 velvet.61143 99.83 True relocation, scaffold gap is present, inconsistency = 1721707 36468091 36470105 34554 36568 NC_000014.9 velvet.61143 100.0 True fake: not a misassembly (possible transposable element) 36559417 36560626 37788 36579 NC_000014.9 velvet.61143 100.0 True fake: not a misassembly (possible transposable element) 36470202 36470723 38279 38800 NC_000014.9 velvet.61143 100.0 True relocation, scaffold gap is present, inconsistency = 81359 36552093 36559140 46048 38811 NC_000014.9 velvet.61143 97.87 True fake: scaffold gap size wrong estimation (local) 36550037 36551852 48816 47001 NC_000014.9 velvet.61143 99.94 True fake: not a misassembly (possible transposable element) 36417807 36420079 51101 48827 NC_000014.9 velvet.61143 99.78 True fake: not a misassembly (possible transposable element) 36533142 36534677 67466 65931 NC_000014.9 velvet.61143 100.0 True relocation, scaffold gap is present, inconsistency = 55538 36590226 36597015 67477 74411 NC_000014.9 velvet.61143 99.93 True fake: scaffold gap size wrong estimation (local) 36597291 36599529 75489 77727 NC_000014.9 velvet.61143 99.91 True fake: scaffold gap size wrong estimation (local) 36599804 36602362 78790 81348 NC_000014.9 velvet.61143 99.96 True fake: scaffold gap size wrong estimation (local) 36602550 36603256 82003 82709 NC_000014.9 velvet.61143 99.86 True relocation, scaffold gap is present, inconsistency = -84644 36519754 36520356 83851 84453 NC_000014.9 velvet.61143 100.0 True fake: scaffold gap size wrong estimation (local) 36520480 36528573 85557 93650 NC_000014.9 velvet.61143 99.94 True relocation, scaffold gap is present, inconsistency = 32925 36561509 36563708 93661 95860 NC_000014.9 velvet.61143 99.73 True inversion, scaffold gap is present 36563880 36567010 98979 95871 NC_000014.9 velvet.61143 99.17 True relocation, scaffold gap is present, inconsistency = 51388 36618551 36621178 99132 101759 NC_000014.9 velvet.61143 99.92 True fake: not a misassembly (possible transposable element) 36560650 36561447 110101 109304 NC_000014.9 velvet.61143 99.75 True fake: not a misassembly (possible transposable element) 36633367 36634909 118459 120001 NC_000014.9 velvet.61143 99.81 True relocation, scaffold gap is present, inconsistency = 30914288 67549543 67550138 120942 120347 NC_000014.9 velvet.61143 100.0 True fake: scaffold gap size wrong estimation (local) 67548679 67549258 122670 122109 NC_000014.9 velvet.61143 96.65 True fake: scaffold gap size wrong estimation (local) 67546658 67548423 124707 122942 NC_000014.9 velvet.61143 100.0 True fake: scaffold gap size wrong estimation (local) 67545947 67546466 126204 125685 NC_000014.9 velvet.61143 100.0 True CONTIG velvet.61143 126204 misassembled 72486001 72489163 3145 6 NC_000014.9 velvet.61159 99.14 True fake: scaffold gap size wrong estimation (local) 72482081 72483694 7634 6021 NC_000014.9 velvet.61159 99.94 True fake: scaffold gap size wrong estimation (local) 72477819 72481792 12527 8554 NC_000014.9 velvet.61159 99.92 True fake: scaffold gap size wrong estimation (local) 72475831 72477467 15346 13710 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 72469446 72470592 17366 16220 NC_000014.9 velvet.61159 99.91 True local misassembly 72470881 72472153 18649 17377 NC_000014.9 velvet.61159 99.84 True local misassembly 72473409 72475456 20705 18660 NC_000014.9 velvet.61159 99.8 True fake: scaffold gap size wrong estimation (local) 72472185 72473160 22567 21592 NC_000014.9 velvet.61159 99.8 True relocation, scaffold gap is present, inconsistency = 10657 72453617 72457020 30471 27075 NC_000014.9 velvet.61159 99.53 True fake: scaffold gap size wrong estimation (local) 72452022 72453331 32760 31451 NC_000014.9 velvet.61159 99.92 True fake: scaffold gap size wrong estimation (local) 72447935 72451793 37332 33479 NC_000014.9 velvet.61159 99.66 True fake: scaffold gap size wrong estimation (local) 72445483 72447711 40507 38307 NC_000014.9 velvet.61159 98.56 True fake: scaffold gap size wrong estimation (local) 72437345 72440399 49202 46148 NC_000014.9 velvet.61159 99.9 True fake: scaffold gap size wrong estimation (local) 72431540 72437031 55769 50265 NC_000014.9 velvet.61159 99.26 True fake: scaffold gap size wrong estimation (local) 72430084 72431392 58020 56712 NC_000014.9 velvet.61159 99.69 True relocation, scaffold gap is present, inconsistency = 14284965 58142728 58143472 60409 59667 NC_000014.9 velvet.61159 99.73 True fake: scaffold gap size wrong estimation (local) 58140878 58142574 62473 60777 NC_000014.9 velvet.61159 100.0 True relocation, scaffold gap is present, inconsistency = -14328504 72468377 72469191 63478 62664 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 72457553 72468110 75257 64646 NC_000014.9 velvet.61159 98.66 True relocation, scaffold gap is present, inconsistency = -4621297 77073602 77075406 80505 78701 NC_000014.9 velvet.61159 99.94 True fake: scaffold gap size wrong estimation (local) 77072791 77073359 81292 80724 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 77071291 77072676 83518 82133 NC_000014.9 velvet.61159 99.78 True fake: scaffold gap size wrong estimation (extensive) 77061599 77062952 85204 83851 NC_000014.9 velvet.61159 99.93 True fake: scaffold gap size wrong estimation (local) 77060261 77061044 86551 85768 NC_000014.9 velvet.61159 99.87 True relocation, scaffold gap is present, inconsistency = 4612745 72440661 72445267 93402 88800 NC_000014.9 velvet.61159 99.83 True fake: scaffold gap size wrong estimation (local) 72406366 72409553 120723 117536 NC_000014.9 velvet.61159 99.91 True fake: scaffold gap size wrong estimation (local) 72403042 72406101 124805 121746 NC_000014.9 velvet.61159 99.93 True fake: scaffold gap size wrong estimation (local) 72400233 72402781 128385 125789 NC_000014.9 velvet.61159 99.96 True relocation, scaffold gap is present, inconsistency = -28290266 100686783 100689640 131989 129244 NC_000014.9 velvet.61159 96.05 True relocation, scaffold gap is present, inconsistency = 26593967 74088447 74089354 136358 135451 NC_000014.9 velvet.61159 98.9 True local misassembly 74087416 74088099 137042 136359 NC_000014.9 velvet.61159 100.0 True relocation, scaffold gap is present, inconsistency = -26600792 100683572 100685031 141678 140219 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 100677204 100683229 148951 142741 NC_000014.9 velvet.61159 99.85 True fake: scaffold gap size wrong estimation (local) 100673690 100676915 153245 150020 NC_000014.9 velvet.61159 99.85 True relocation, scaffold gap is present, inconsistency = 23639846 77032315 77033312 154774 153777 NC_000014.9 velvet.61159 97.49 True fake: scaffold gap size wrong estimation (local) 77030983 77032314 156153 154822 NC_000014.9 velvet.61159 99.17 True fake: not a misassembly (possible transposable element) 100662580 100664593 158637 156624 NC_000014.9 velvet.61159 100.0 True fake: not a misassembly (possible transposable element) 77027533 77029624 160739 158648 NC_000014.9 velvet.61159 99.9 True relocation, scaffold gap is present, inconsistency = -23634679 100648428 100662189 174580 160762 NC_000014.9 velvet.61159 99.86 True relocation, scaffold gap is present, inconsistency = 28276929 72370151 72371488 175928 174591 NC_000014.9 velvet.61159 99.78 True fake: scaffold gap size wrong estimation (local) 72364001 72368990 182874 177885 NC_000014.9 velvet.61159 99.9 True local misassembly 72369061 72370135 184092 183018 NC_000014.9 velvet.61159 99.91 True relocation, scaffold gap is present, inconsistency = -28277310 100644403 100646360 186060 184103 NC_000014.9 velvet.61159 99.9 True local misassembly 100646453 100647911 188060 186611 NC_000014.9 velvet.61159 98.97 True relocation, scaffold gap is present, inconsistency = 45859846 54775528 54779665 199478 195002 NC_000014.9 velvet.61159 99.88 True relocation, scaffold gap is present, inconsistency = -45868625 100642926 100644142 200705 199489 NC_000014.9 velvet.61159 99.84 True fake: scaffold gap size wrong estimation (local) 100632593 100642617 211428 201500 NC_000014.9 velvet.61159 99.03 True fake: scaffold gap size wrong estimation (local) 100627620 100631293 217158 213485 NC_000014.9 velvet.61159 99.97 True relocation, scaffold gap is present, inconsistency = 7539007 93081335 93087376 224564 218395 NC_000014.9 velvet.61159 97.77 True fake: scaffold gap size wrong estimation (local) 93077581 93080722 229116 225975 NC_000014.9 velvet.61159 99.97 True fake: scaffold gap size wrong estimation (local) 93075339 93077322 232081 230098 NC_000014.9 velvet.61159 99.95 True fake: scaffold gap size wrong estimation (local) 93072750 93075046 235403 233107 NC_000014.9 velvet.61159 99.96 True relocation, scaffold gap is present, inconsistency = 38297243 54774819 54775496 236091 235414 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 54735211 54739884 269708 264347 NC_000014.9 velvet.61159 99.42 True relocation, scaffold gap is present, inconsistency = -38313462 93043016 93048662 276139 269719 NC_000014.9 velvet.61159 99.89 True fake: scaffold gap size wrong estimation (local) 93039446 93042742 280480 277184 NC_000014.9 velvet.61159 99.94 True relocation, scaffold gap is present, inconsistency = 19340916 73697745 73698517 281265 280493 NC_000014.9 velvet.61159 99.87 True relocation, scaffold gap is present, inconsistency = 13443 73683183 73683713 281854 282384 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 73684846 73685488 284382 285024 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 73685692 73686480 285159 285947 NC_000014.9 velvet.61159 98.73 True fake: scaffold gap size wrong estimation (local) 73687041 73687617 286690 287266 NC_000014.9 velvet.61159 100.0 True relocation, scaffold gap is present, inconsistency = 19344723 93032351 93038060 293103 287277 NC_000014.9 velvet.61159 99.96 True fake: scaffold gap size wrong estimation (local) 93022799 93032072 303625 294154 NC_000014.9 velvet.61159 99.67 True relocation, scaffold gap is present, inconsistency = 19348376 73673028 73673656 305020 304392 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 73671008 73672329 307552 306231 NC_000014.9 velvet.61159 99.77 True fake: scaffold gap size wrong estimation (local) 73669630 73670716 309171 308085 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 73667623 73668716 312012 310919 NC_000014.9 velvet.61159 99.91 True fake: scaffold gap size wrong estimation (local) 73665791 73667134 314318 312975 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 73663476 73665504 317137 315182 NC_000014.9 velvet.61159 96.33 True fake: scaffold gap size wrong estimation (local) 73661701 73663199 319596 318099 NC_000014.9 velvet.61159 99.8 True fake: scaffold gap size wrong estimation (local) 73619115 73619903 359980 359192 NC_000014.9 velvet.61159 99.87 True fake: scaffold gap size wrong estimation (local) 73618130 73618842 362177 361465 NC_000014.9 velvet.61159 99.86 True fake: scaffold gap size wrong estimation (local) 73616701 73617334 362821 362188 NC_000014.9 velvet.61159 99.68 True relocation, scaffold gap is present, inconsistency = 15454952 58159242 58161082 365367 363488 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 58157174 58159001 368109 366281 NC_000014.9 velvet.61159 99.95 True fake: scaffold gap size wrong estimation (local) 58156291 58156808 369214 368697 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 58153431 58154171 372875 372135 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 58148314 58153161 378952 374052 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 58144825 58147302 383392 380915 NC_000014.9 velvet.61159 100.0 True fake: not a misassembly (possible transposable element) 92251134 92252070 410487 411423 NC_000014.9 velvet.61159 99.57 True fake: not a misassembly (possible transposable element) 58111027 58114924 418729 414356 NC_000014.9 velvet.61159 96.09 True fake: scaffold gap size wrong estimation (local) 58107762 58110751 422450 419461 NC_000014.9 velvet.61159 99.87 True fake: scaffold gap size wrong estimation (local) 58105692 58107492 425256 423229 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 58103099 58105399 428455 426167 NC_000014.9 velvet.61159 99.39 True fake: scaffold gap size wrong estimation (local) 58098799 58102526 433663 429936 NC_000014.9 velvet.61159 100.0 True relocation, scaffold gap is present, inconsistency = -24899 58122918 58123468 434443 433893 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 58116557 58122808 441291 434972 NC_000014.9 velvet.61159 98.61 True relocation, scaffold gap is present, inconsistency = -14283274 72394996 72395533 446126 445589 NC_000014.9 velvet.61159 100.0 True relocation, scaffold gap is present, inconsistency = 49700457 22689922 22692581 448084 450810 NC_000014.9 velvet.61159 97.54 True fake: not a misassembly (possible transposable element) 22693877 22695254 452568 451191 NC_000014.9 velvet.61159 100.0 True fake: not a misassembly (possible transposable element) 22695466 22696569 456003 457106 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 22696815 22697607 458966 459758 NC_000014.9 velvet.61159 100.0 True relocation, scaffold gap is present, inconsistency = 35269278 57967021 57985150 459894 478013 NC_000014.9 velvet.61159 99.81 True fake: scaffold gap size wrong estimation (local) 57985409 58000513 478757 496593 NC_000014.9 velvet.61159 97.62 True fake: scaffold gap size wrong estimation (local) 58000895 58006701 497526 504082 NC_000014.9 velvet.61159 99.84 True fake: scaffold gap size wrong estimation (local) 58006942 58009558 505045 507661 NC_000014.9 velvet.61159 99.85 True fake: scaffold gap size wrong estimation (local) 58009848 58013793 508741 512756 NC_000014.9 velvet.61159 99.75 True fake: scaffold gap size wrong estimation (local) 58014049 58017060 513907 516918 NC_000014.9 velvet.61159 99.8 True fake: scaffold gap size wrong estimation (local) 58017266 58019626 517916 520278 NC_000014.9 velvet.61159 99.7 True relocation, scaffold gap is present, inconsistency = 63926 58083563 58088439 525165 520289 NC_000014.9 velvet.61159 99.98 True relocation, scaffold gap is present, inconsistency = -9515 58091215 58092804 527028 525439 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (extensive) 58081779 58083298 528558 527039 NC_000014.9 velvet.61159 100.0 True relocation, scaffold gap is present, inconsistency = -9394 58088457 58090596 531274 529135 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (extensive) 58077572 58080104 534316 531784 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 58058047 58058557 549468 548958 NC_000014.9 velvet.61159 99.61 True fake: not a misassembly (possible transposable element) 58019831 58023388 549499 553056 NC_000014.9 velvet.61159 99.58 True fake: not a misassembly (possible transposable element) 58054885 58058015 556197 553067 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 58049240 58054624 562661 557277 NC_000014.9 velvet.61159 99.93 True fake: scaffold gap size wrong estimation (local) 58045612 58048959 567081 563734 NC_000014.9 velvet.61159 99.91 True fake: scaffold gap size wrong estimation (local) 58023438 58024098 582324 581664 NC_000014.9 velvet.61159 99.55 True inversion, scaffold gap is present 58024644 58029267 582335 586936 NC_000014.9 velvet.61159 99.28 True fake: scaffold gap size wrong estimation (local) 58029537 58032568 587818 590849 NC_000014.9 velvet.61159 99.87 True fake: scaffold gap size wrong estimation (local) 58038594 58040388 591351 593145 NC_000014.9 velvet.61159 99.61 True fake: scaffold gap size wrong estimation (local) 58058646 58061989 616447 619790 NC_000014.9 velvet.61159 99.79 True relocation, scaffold gap is present, inconsistency = 10569 58072752 58074481 619984 621713 NC_000014.9 velvet.61159 99.31 True local misassembly 58074482 58075075 622979 623572 NC_000014.9 velvet.61159 98.82 True local misassembly 58075748 58077413 623573 625238 NC_000014.9 velvet.61159 99.4 True relocation, scaffold gap is present, inconsistency = -13979 58063647 58065001 625451 626805 NC_000014.9 velvet.61159 99.85 True fake: scaffold gap size wrong estimation (local) 58065230 58068760 627714 631244 NC_000014.9 velvet.61159 99.86 True fake: scaffold gap size wrong estimation (local) 58069057 58072500 632320 635763 NC_000014.9 velvet.61159 99.91 True relocation, scaffold gap is present, inconsistency = 21354373 79427825 79435283 644959 636715 NC_000014.9 velvet.61159 99.93 True fake: scaffold gap size wrong estimation (local) 79424867 79427532 648646 645981 NC_000014.9 velvet.61159 99.89 True relocation, scaffold gap is present, inconsistency = -12869242 92291558 92294098 651197 648657 NC_000014.9 velvet.61159 99.96 True relocation, scaffold gap is present, inconsistency = -7543 92296333 92297501 653965 652797 NC_000014.9 velvet.61159 99.83 True fake: scaffold gap size wrong estimation (local) 92287368 92291108 657716 653976 NC_000014.9 velvet.61159 99.81 True relocation, scaffold gap is present, inconsistency = 34192627 58093350 58094093 658364 659107 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 58094362 58097693 660078 663409 NC_000014.9 velvet.61159 100.0 True relocation, scaffold gap is present, inconsistency = 34131004 92254382 92256808 691520 689094 NC_000014.9 velvet.61159 99.75 True relocation, scaffold gap is present, inconsistency = -208294 92455970 92462483 698215 691713 NC_000014.9 velvet.61159 99.55 True fake: scaffold gap size wrong estimation (local) 92448355 92455701 706789 699250 NC_000014.9 velvet.61159 99.71 True relocation, scaffold gap is present, inconsistency = 18294783 74152989 74153561 706800 707372 NC_000014.9 velvet.61159 100.0 True relocation, scaffold gap is present, inconsistency = -16026494 58127078 58132604 707383 712946 NC_000014.9 velvet.61159 98.78 True fake: scaffold gap size wrong estimation (local) 58132888 58134701 713638 715674 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 58134988 58137448 716157 718617 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 58137681 58139985 719716 722020 NC_000014.9 velvet.61159 100.0 True relocation, scaffold gap is present, inconsistency = 34109778 92249774 92250634 722031 722891 NC_000014.9 velvet.61159 99.65 True fake: scaffold gap size wrong estimation (local) 92252097 92254128 725258 727211 NC_000014.9 velvet.61159 96.02 True fake: scaffold gap size wrong estimation (local) 92258566 92262021 727571 731026 NC_000014.9 velvet.61159 99.86 True local misassembly 92257222 92257859 731037 731674 NC_000014.9 velvet.61159 99.84 True relocation, scaffold gap is present, inconsistency = 70008214 22246166 22248229 734516 732453 NC_000014.9 velvet.61159 99.85 True relocation, scaffold gap is present, inconsistency = 10835 22232706 22235144 737254 734703 NC_000014.9 velvet.61159 99.71 True relocation, scaffold gap is present, inconsistency = -35895112 58126070 58126790 739002 738282 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 58124832 58125987 740282 739127 NC_000014.9 velvet.61159 99.22 True fake: scaffold gap size wrong estimation (local) 58123915 58124743 741237 740409 NC_000014.9 velvet.61159 99.76 True fake: scaffold gap size wrong estimation (local) 58097749 58098757 765332 764324 NC_000014.9 velvet.61159 100.0 True relocation, scaffold gap is present, inconsistency = 40284957 98383725 98384795 765343 766413 NC_000014.9 velvet.61159 99.91 True relocation, scaffold gap is present, inconsistency = 76154330 22225447 22229384 770361 766424 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 22221846 22225170 774635 771245 NC_000014.9 velvet.61159 97.76 True fake: scaffold gap size wrong estimation (local) 22187295 22188357 806360 805298 NC_000014.9 velvet.61159 99.81 True local misassembly 22185055 22187294 809037 806798 NC_000014.9 velvet.61159 100.0 True local misassembly 22188376 22191214 811885 809048 NC_000014.9 velvet.61159 99.93 True fake: scaffold gap size wrong estimation (local) 22184276 22185027 812646 811896 NC_000014.9 velvet.61159 99.87 True fake: scaffold gap size wrong estimation (local) 22171246 22183792 826505 813929 NC_000014.9 velvet.61159 99.62 True relocation, scaffold gap is present, inconsistency = -21734 22191215 22192969 828270 826516 NC_000014.9 velvet.61159 99.83 True fake: scaffold gap size wrong estimation (local) 22156899 22161476 859137 853888 NC_000014.9 velvet.61159 99.89 True fake: scaffold gap size wrong estimation (local) 22151624 22156611 865034 860219 NC_000014.9 velvet.61159 96.36 True relocation, scaffold gap is present, inconsistency = -70216 22218046 22221829 868844 865045 NC_000014.9 velvet.61159 99.53 True fake: scaffold gap size wrong estimation (local) 22216165 22217234 871477 870408 NC_000014.9 velvet.61159 98.88 True local misassembly 22215084 22215943 872337 871478 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 22213018 22214232 875037 873823 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 22205893 22212812 883243 876042 NC_000014.9 velvet.61159 99.86 True fake: scaffold gap size wrong estimation (local) 22193706 22205748 896270 884185 NC_000014.9 velvet.61159 97.24 True relocation, scaffold gap is present, inconsistency = -70055840 92247439 92248278 898377 897538 NC_000014.9 velvet.61159 98.81 True local misassembly 92245859 92247179 899698 898378 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 92242385 92243168 901033 900250 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 92211793 92213158 930521 929156 NC_000014.9 velvet.61159 99.49 True fake: scaffold gap size wrong estimation (local) 92208818 92211473 934399 931744 NC_000014.9 velvet.61159 99.81 True relocation, scaffold gap is present, inconsistency = 2069981 94281465 94285457 934410 938402 NC_000014.9 velvet.61159 99.87 True relocation, scaffold gap is present, inconsistency = -8156 94277312 94278757 938413 939858 NC_000014.9 velvet.61159 99.93 True relocation, scaffold gap is present, inconsistency = 16822889 77452803 77454412 941478 939869 NC_000014.9 velvet.61159 99.88 True fake: scaffold gap size wrong estimation (local) 77450781 77452391 944421 942811 NC_000014.9 velvet.61159 100.0 True relocation, scaffold gap is present, inconsistency = -14175629 91624608 91625912 946223 944919 NC_000014.9 velvet.61159 99.92 True fake: scaffold gap size wrong estimation (local) 91623166 91624070 948060 947156 NC_000014.9 velvet.61159 99.78 True relocation, scaffold gap is present, inconsistency = 1513488 90107486 90108898 950252 948840 NC_000014.9 velvet.61159 99.93 True relocation, scaffold gap is present, inconsistency = 12583931 77522432 77523544 951375 950263 NC_000014.9 velvet.61159 99.91 True inversion, scaffold gap is present 77519699 77522343 951386 954030 NC_000014.9 velvet.61159 99.81 True relocation, scaffold gap is present, inconsistency = 14691130 92213484 92217336 957970 954041 NC_000014.9 velvet.61159 99.66 True relocation, scaffold gap is present, inconsistency = 14752903 77455246 77460570 963305 957981 NC_000014.9 velvet.61159 99.96 True relocation, scaffold gap is present, inconsistency = -16876098 94303603 94311656 991046 982993 NC_000014.9 velvet.61159 99.83 True inversion, scaffold gap is present 94311981 94319721 991057 998800 NC_000014.9 velvet.61159 99.86 True fake: scaffold gap size wrong estimation (local) 94339822 94347946 1019311 1027100 NC_000014.9 velvet.61159 95.58 True relocation, scaffold gap is present, inconsistency = 45064 94285550 94294744 1036308 1027114 NC_000014.9 velvet.61159 99.8 True local misassembly 94278747 94281150 1038712 1036309 NC_000014.9 velvet.61159 99.96 True relocation, scaffold gap is present, inconsistency = 58624 94214451 94217735 1041100 1044384 NC_000014.9 velvet.61159 99.85 True fake: scaffold gap size wrong estimation (local) 94219356 94219970 1046647 1047261 NC_000014.9 velvet.61159 100.0 True relocation, scaffold gap is present, inconsistency = 128152 94348133 94350158 1047272 1049296 NC_000014.9 velvet.61159 99.61 True relocation, scaffold gap is present, inconsistency = 71475 94270930 94276647 1055024 1049307 NC_000014.9 velvet.61159 99.93 True fake: scaffold gap size wrong estimation (local) 94269635 94270636 1056920 1055919 NC_000014.9 velvet.61159 96.11 True local misassembly 94268806 94269393 1057508 1056921 NC_000014.9 velvet.61159 99.32 True fake: scaffold gap size wrong estimation (local) 94266705 94268575 1060729 1058859 NC_000014.9 velvet.61159 100.0 True relocation, scaffold gap is present, inconsistency = 75911 94350207 94352299 1066450 1068543 NC_000014.9 velvet.61159 99.9 True fake: scaffold gap size wrong estimation (local) 94352463 94354179 1069215 1070925 NC_000014.9 velvet.61159 99.53 True relocation, scaffold gap is present, inconsistency = 66547 94264422 94266673 1092419 1090168 NC_000014.9 velvet.61159 99.91 True relocation, scaffold gap is present, inconsistency = 87356 94174987 94177055 1094498 1092430 NC_000014.9 velvet.61159 99.95 True fake: scaffold gap size wrong estimation (local) 94171203 94173968 1099075 1096310 NC_000014.9 velvet.61159 99.93 True relocation, scaffold gap is present, inconsistency = 234503 94410074 94411240 1100678 1101844 NC_000014.9 velvet.61159 99.91 True fake: scaffold gap size wrong estimation (local) 94411435 94416857 1102673 1108094 NC_000014.9 velvet.61159 99.82 True fake: not a misassembly (possible transposable element) 94398648 94402019 1108105 1111475 NC_000014.9 velvet.61159 99.94 True fake: not a misassembly (possible transposable element) 94418401 94419218 1111486 1112302 NC_000014.9 velvet.61159 99.63 True fake: scaffold gap size wrong estimation (local) 94420764 94428431 1114675 1122342 NC_000014.9 velvet.61159 99.87 True relocation, scaffold gap is present, inconsistency = 1191468 93226793 93229285 1124845 1122353 NC_000014.9 velvet.61159 99.92 True relocation, scaffold gap is present, inconsistency = 1160365 94390080 94392759 1125275 1127954 NC_000014.9 velvet.61159 99.78 True fake: scaffold gap size wrong estimation (local) 94393053 94398529 1129117 1134847 NC_000014.9 velvet.61159 99.87 True relocation, scaffold gap is present, inconsistency = 37127 94435667 94449395 1134858 1149273 NC_000014.9 velvet.61159 99.5 True fake: scaffold gap size wrong estimation (local) 94449596 94450592 1149482 1150478 NC_000014.9 velvet.61159 99.9 True relocation, scaffold gap is present, inconsistency = -61543285 32907320 32909249 1150491 1152420 NC_000014.9 velvet.61159 99.95 True relocation, scaffold gap is present, inconsistency = -7599 32903953 32907014 1154723 1157784 NC_000014.9 velvet.61159 99.87 True relocation, scaffold gap is present, inconsistency = 61547424 94456831 94457538 1160177 1160884 NC_000014.9 velvet.61159 99.86 True local misassembly 94457795 94458398 1160885 1161488 NC_000014.9 velvet.61159 97.68 True relocation, scaffold gap is present, inconsistency = 1733761 92721106 92722156 1164416 1163366 NC_000014.9 velvet.61159 98.95 True fake: not a misassembly (possible transposable element) 69531155 69534269 1164417 1167586 NC_000014.9 velvet.61159 97.92 True fake: not a misassembly (possible transposable element) 92719311 92720384 1169323 1168250 NC_000014.9 velvet.61159 99.91 True fake: not a misassembly (possible transposable element) 79258509 79261628 1169334 1172613 NC_000014.9 velvet.61159 99.97 True fake: not a misassembly (possible transposable element) 92718587 92719155 1173192 1172624 NC_000014.9 velvet.61159 100.0 True relocation, scaffold gap is present, inconsistency = 13454474 79261681 79264102 1173203 1175624 NC_000014.9 velvet.61159 100.0 True relocation, scaffold gap is present, inconsistency = 5907690 85172077 85173142 1175909 1176974 NC_000014.9 velvet.61159 100.0 True relocation, scaffold gap is present, inconsistency = -3709854 81463299 81463932 1176985 1177618 NC_000014.9 velvet.61159 100.0 True local misassembly 81464219 81465181 1177619 1178581 NC_000014.9 velvet.61159 98.96 True relocation, scaffold gap is present, inconsistency = -18456 81446792 81447916 1178648 1179772 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 81448201 81452091 1180858 1184739 NC_000014.9 velvet.61159 99.74 True relocation, scaffold gap is present, inconsistency = 49254306 32190894 32193884 1187740 1184750 NC_000014.9 velvet.61159 99.93 True relocation, scaffold gap is present, inconsistency = 16391026 48584921 48588181 1187751 1191454 NC_000014.9 velvet.61159 99.94 True fake: scaffold gap size wrong estimation (local) 48588429 48590059 1192012 1193642 NC_000014.9 velvet.61159 99.94 True relocation, scaffold gap is present, inconsistency = 36597444 85195100 85197314 1201239 1203443 NC_000014.9 velvet.61159 99.41 True fake: scaffold gap size wrong estimation (local) 85197442 85199939 1204422 1206919 NC_000014.9 velvet.61159 99.96 True fake: scaffold gap size wrong estimation (local) 85200098 85202187 1207792 1209881 NC_000014.9 velvet.61159 99.95 True fake: not a misassembly (possible transposable element) 81477815 81480241 1209892 1212318 NC_000014.9 velvet.61159 99.88 True fake: not a misassembly (possible transposable element) 85204208 85205440 1212715 1213947 NC_000014.9 velvet.61159 99.19 True relocation, scaffold gap is present, inconsistency = -3734670 81471017 81477579 1214194 1220903 NC_000014.9 velvet.61159 99.59 True relocation, scaffold gap is present, inconsistency = 49677197 31790814 31793809 1224688 1220914 NC_000014.9 velvet.61159 99.83 True fake: scaffold gap size wrong estimation (local) 31789321 31790568 1226244 1224997 NC_000014.9 velvet.61159 99.84 True fake: scaffold gap size wrong estimation (local) 31786058 31789033 1230210 1227235 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 31783792 31785875 1233190 1231107 NC_000014.9 velvet.61159 99.9 True fake: scaffold gap size wrong estimation (local) 31761335 31763845 1254100 1251590 NC_000014.9 velvet.61159 99.88 True fake: scaffold gap size wrong estimation (local) 31759337 31760122 1256868 1256083 NC_000014.9 velvet.61159 99.87 True fake: scaffold gap size wrong estimation (local) 31757511 31759305 1259227 1257433 NC_000014.9 velvet.61159 99.78 True fake: scaffold gap size wrong estimation (local) 31751865 31754578 1263341 1260689 NC_000014.9 velvet.61159 97.48 True fake: scaffold gap size wrong estimation (local) 31748879 31750150 1267467 1266196 NC_000014.9 velvet.61159 99.92 True fake: scaffold gap size wrong estimation (local) 31747400 31748612 1268974 1267762 NC_000014.9 velvet.61159 99.92 True fake: scaffold gap size wrong estimation (local) 31745541 31747003 1271804 1270335 NC_000014.9 velvet.61159 99.86 True fake: scaffold gap size wrong estimation (local) 31743571 31744608 1275148 1274111 NC_000014.9 velvet.61159 98.75 True local misassembly 31742876 31743395 1275668 1275149 NC_000014.9 velvet.61159 99.81 True fake: scaffold gap size wrong estimation (local) 31739359 31742621 1280111 1276803 NC_000014.9 velvet.61159 99.91 True fake: scaffold gap size wrong estimation (local) 31737768 31739010 1282391 1281149 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 31735828 31737036 1284771 1283563 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 31732866 31735558 1288389 1285697 NC_000014.9 velvet.61159 99.89 True fake: scaffold gap size wrong estimation (local) 31728405 31728996 1288991 1288400 NC_000014.9 velvet.61159 100.0 True fake: not a misassembly (possible transposable element) 81508702 81512319 1294145 1297957 NC_000014.9 velvet.61159 100.0 True fake: not a misassembly (possible transposable element) 31712258 31714694 1300404 1297968 NC_000014.9 velvet.61159 99.63 True local misassembly 31714708 31716144 1301851 1300415 NC_000014.9 velvet.61159 99.72 True fake: scaffold gap size wrong estimation (local) 31705976 31707084 1304017 1302909 NC_000014.9 velvet.61159 99.73 True local misassembly 31709555 31710552 1307066 1306069 NC_000014.9 velvet.61159 98.9 True local misassembly 31707758 31709248 1308557 1307067 NC_000014.9 velvet.61159 99.87 True fake: scaffold gap size wrong estimation (local) 31701809 31703435 1313352 1311726 NC_000014.9 velvet.61159 99.75 True fake: scaffold gap size wrong estimation (local) 31699129 31700434 1316866 1315527 NC_000014.9 velvet.61159 99.92 True fake: scaffold gap size wrong estimation (local) 31677077 31677622 1341989 1341444 NC_000014.9 velvet.61159 99.82 True relocation, scaffold gap is present, inconsistency = 18100 31650544 31651414 1350422 1349552 NC_000014.9 velvet.61159 99.77 True fake: scaffold gap size wrong estimation (local) 31649067 31649866 1351803 1351004 NC_000014.9 velvet.61159 99.62 True local misassembly 31653535 31654395 1353369 1352509 NC_000014.9 velvet.61159 99.3 True relocation, scaffold gap is present, inconsistency = -16857 31668694 31669676 1355067 1354085 NC_000014.9 velvet.61159 99.9 True fake: scaffold gap size wrong estimation (local) 31658771 31661559 1358373 1355585 NC_000014.9 velvet.61159 99.96 True relocation, scaffold gap is present, inconsistency = -38687593 70319306 70320104 1385431 1384633 NC_000014.9 velvet.61159 100.0 True relocation, scaffold gap is present, inconsistency = 38648257 31669875 31670462 1386018 1386587 NC_000014.9 velvet.61159 95.85 True fake: scaffold gap size wrong estimation (local) 31672724 31674887 1389612 1391807 NC_000014.9 velvet.61159 99.95 True fake: scaffold gap size wrong estimation (local) 31675154 31676038 1392832 1393716 NC_000014.9 velvet.61159 100.0 True fake: scaffold gap size wrong estimation (local) 31676316 31677101 1393727 1394740 NC_000014.9 velvet.61159 100.0 True CONTIG velvet.61159 1423526 misassembled 63987258 63988113 1060 205 NC_000014.9 velvet.61165 100.0 True fake: scaffold gap size wrong estimation (local) 63985823 63986979 3055 1912 NC_000014.9 velvet.61165 98.88 True fake: scaffold gap size wrong estimation (local) 63984209 63984907 4802 4104 NC_000014.9 velvet.61165 100.0 True fake: scaffold gap size wrong estimation (local) 63979795 63983782 10103 6022 NC_000014.9 velvet.61165 99.97 True fake: scaffold gap size wrong estimation (local) 63977727 63979631 12972 11068 NC_000014.9 velvet.61165 100.0 True fake: scaffold gap size wrong estimation (local) 63975523 63977216 15994 14301 NC_000014.9 velvet.61165 99.41 True fake: scaffold gap size wrong estimation (local) 63974039 63974564 17974 17449 NC_000014.9 velvet.61165 100.0 True relocation, scaffold gap is present, inconsistency = 12560826 51406569 51412595 18592 25311 NC_000014.9 velvet.61165 99.66 True relocation, scaffold gap is present, inconsistency = 12556526 63971570 63972983 29173 27760 NC_000014.9 velvet.61165 99.29 True fake: scaffold gap size wrong estimation (local) 63969686 63970630 31984 31040 NC_000014.9 velvet.61165 100.0 True fake: scaffold gap size wrong estimation (local) 63965164 63966342 36516 35338 NC_000014.9 velvet.61165 100.0 True fake: scaffold gap size wrong estimation (local) 63962319 63964569 39950 37785 NC_000014.9 velvet.61165 96.16 True fake: scaffold gap size wrong estimation (local) 63959468 63961867 43683 41284 NC_000014.9 velvet.61165 99.92 True fake: scaffold gap size wrong estimation (local) 63958015 63958781 45890 45124 NC_000014.9 velvet.61165 97.39 True fake: scaffold gap size wrong estimation (local) 63954121 63957099 50392 47414 NC_000014.9 velvet.61165 99.8 True fake: scaffold gap size wrong estimation (local) 63951560 63953938 52914 50540 NC_000014.9 velvet.61165 99.62 True fake: scaffold gap size wrong estimation (local) 63948803 63950281 56554 55076 NC_000014.9 velvet.61165 99.73 True fake: scaffold gap size wrong estimation (local) 63945743 63946385 60763 60114 NC_000014.9 velvet.61165 99.84 True fake: scaffold gap size wrong estimation (local) 63944992 63945626 61790 61067 NC_000014.9 velvet.61165 98.1 True fake: scaffold gap size wrong estimation (local) 63942899 63943653 64418 63664 NC_000014.9 velvet.61165 99.87 True fake: scaffold gap size wrong estimation (local) 63939609 63942413 68258 65402 NC_000014.9 velvet.61165 99.64 True fake: scaffold gap size wrong estimation (local) 63938394 63939335 70097 69156 NC_000014.9 velvet.61165 99.89 True fake: scaffold gap size wrong estimation (local) 63936145 63938173 72642 70614 NC_000014.9 velvet.61165 99.7 True fake: scaffold gap size wrong estimation (local) 63932507 63935890 77044 73665 NC_000014.9 velvet.61165 99.67 True fake: scaffold gap size wrong estimation (local) 63931552 63932102 78601 78051 NC_000014.9 velvet.61165 100.0 True fake: scaffold gap size wrong estimation (local) 63899769 63901871 108160 106038 NC_000014.9 velvet.61165 98.96 True fake: scaffold gap size wrong estimation (local) 63898675 63899261 109971 109385 NC_000014.9 velvet.61165 99.83 True fake: scaffold gap size wrong estimation (local) 63897254 63898526 111397 110125 NC_000014.9 velvet.61165 99.92 True fake: scaffold gap size wrong estimation (local) 63893521 63895090 115683 114177 NC_000014.9 velvet.61165 95.78 True relocation, scaffold gap is present, inconsistency = -37713 63928008 63929492 118909 117425 NC_000014.9 velvet.61165 99.93 True fake: scaffold gap size wrong estimation (local) 63925479 63927667 122428 120140 NC_000014.9 velvet.61165 95.96 True fake: scaffold gap size wrong estimation (local) 63920968 63923787 127648 124832 NC_000014.9 velvet.61165 99.82 True fake: scaffold gap size wrong estimation (local) 63917741 63920837 131480 128329 NC_000014.9 velvet.61165 100.0 True fake: scaffold gap size wrong estimation (local) 63915050 63917496 134903 132518 NC_000014.9 velvet.61165 97.45 True fake: scaffold gap size wrong estimation (local) 63913977 63914792 136598 135783 NC_000014.9 velvet.61165 99.51 True fake: scaffold gap size wrong estimation (local) 63909815 63912949 141293 138159 NC_000014.9 velvet.61165 99.87 True fake: scaffold gap size wrong estimation (local) 63906236 63909559 145742 142388 NC_000014.9 velvet.61165 98.78 True fake: scaffold gap size wrong estimation (local) 63904909 63905782 147764 146891 NC_000014.9 velvet.61165 98.4 True fake: scaffold gap size wrong estimation (local) 63902949 63904623 150060 148394 NC_000014.9 velvet.61165 99.4 True relocation, scaffold gap is present, inconsistency = 21892442 42009872 42010496 150071 150695 NC_000014.9 velvet.61165 100.0 True fake: scaffold gap size wrong estimation (local) 42011051 42017160 152018 158127 NC_000014.9 velvet.61165 99.95 True fake: scaffold gap size wrong estimation (local) 42017445 42023112 159038 164873 NC_000014.9 velvet.61165 100.0 True fake: scaffold gap size wrong estimation (local) 42023402 42024054 165452 166104 NC_000014.9 velvet.61165 100.0 True fake: scaffold gap size wrong estimation (local) 42024324 42028179 166539 171046 NC_000014.9 velvet.61165 99.97 True fake: scaffold gap size wrong estimation (local) 42028444 42035672 172125 179353 NC_000014.9 velvet.61165 100.0 True local misassembly 42039420 42041104 179354 181038 NC_000014.9 velvet.61165 99.41 True indel: indel (<= 5bp) 42041105 42043309 181043 183247 NC_000014.9 velvet.61165 99.68 True relocation, scaffold gap is present, inconsistency = 21820544 63864084 63865488 184882 183478 NC_000014.9 velvet.61165 99.57 True fake: scaffold gap size wrong estimation (local) 63862998 63863859 186484 185623 NC_000014.9 velvet.61165 98.72 True local misassembly 63861675 63862806 187616 186485 NC_000014.9 velvet.61165 98.76 True fake: scaffold gap size wrong estimation (local) 63860105 63861141 190018 188982 NC_000014.9 velvet.61165 99.9 True relocation, scaffold gap is present, inconsistency = 21815989 42043599 42044105 190029 190535 NC_000014.9 velvet.61165 98.03 True fake: scaffold gap size wrong estimation (local) 42044122 42045053 190780 191711 NC_000014.9 velvet.61165 100.0 True fake: scaffold gap size wrong estimation (local) 42045305 42048505 192614 196242 NC_000014.9 velvet.61165 98.2 True fake: scaffold gap size wrong estimation (local) 42049207 42051149 197396 199338 NC_000014.9 velvet.61165 99.49 True fake: scaffold gap size wrong estimation (local) 42051903 42052404 201129 201630 NC_000014.9 velvet.61165 100.0 True fake: scaffold gap size wrong estimation (local) 42052681 42053428 201824 202571 NC_000014.9 velvet.61165 99.33 True fake: scaffold gap size wrong estimation (local) 42053823 42054911 204149 205237 NC_000014.9 velvet.61165 99.91 True relocation, scaffold gap is present, inconsistency = 3331642 38719832 38721066 207586 206352 NC_000014.9 velvet.61165 100.0 True fake: scaffold gap size wrong estimation (local) 38718182 38719721 210116 208552 NC_000014.9 velvet.61165 99.86 True fake: scaffold gap size wrong estimation (local) 38716442 38718077 212177 210542 NC_000014.9 velvet.61165 100.0 True relocation, scaffold gap is present, inconsistency = -3321964 42037529 42038395 213054 212188 NC_000014.9 velvet.61165 100.0 True fake: scaffold gap size wrong estimation (local) 42035670 42037257 216106 214542 NC_000014.9 velvet.61165 98.42 True relocation, scaffold gap is present, inconsistency = 8638 42067864 42069246 238075 239509 NC_000014.9 velvet.61165 99.48 True fake: scaffold gap size wrong estimation (local) 42069492 42072386 240424 243290 NC_000014.9 velvet.61165 99.0 True fake: scaffold gap size wrong estimation (local) 42072499 42092727 244132 266406 NC_000014.9 velvet.61165 99.6 True fake: scaffold gap size wrong estimation (local) 42093051 42096962 267287 271198 NC_000014.9 velvet.61165 99.92 True fake: scaffold gap size wrong estimation (local) 42097271 42098146 272235 273110 NC_000014.9 velvet.61165 99.89 True fake: scaffold gap size wrong estimation (local) 42098429 42112793 273494 288672 NC_000014.9 velvet.61165 99.94 True fake: scaffold gap size wrong estimation (local) 42118340 42119899 290280 291830 NC_000014.9 velvet.61165 98.9 True fake: scaffold gap size wrong estimation (local) 42120268 42121018 291841 292625 NC_000014.9 velvet.61165 95.41 True relocation, scaffold gap is present, inconsistency = -9085 42113817 42117541 294509 298233 NC_000014.9 velvet.61165 99.97 True fake: scaffold gap size wrong estimation (local) 42122182 42125192 303428 306442 NC_000014.9 velvet.61165 99.97 True fake: scaffold gap size wrong estimation (local) 42126251 42131762 308039 314260 NC_000014.9 velvet.61165 99.49 True fake: scaffold gap size wrong estimation (extensive) 42137037 42137594 328945 329502 NC_000014.9 velvet.61165 100.0 True fake: scaffold gap size wrong estimation (local) 42137856 42141282 330585 334011 NC_000014.9 velvet.61165 99.88 True indel: indel (> 5bp) 42141307 42142122 334100 334915 NC_000014.9 velvet.61165 99.75 True fake: scaffold gap size wrong estimation (local) 42142402 42142948 335916 336462 NC_000014.9 velvet.61165 100.0 True fake: scaffold gap size wrong estimation (extensive) 42155223 42162431 340017 348268 NC_000014.9 velvet.61165 98.83 True fake: scaffold gap size wrong estimation (extensive) 42188001 42189812 366368 368328 NC_000014.9 velvet.61165 96.91 True relocation, scaffold gap is present, inconsistency = -17897 42171926 42181758 368339 378975 NC_000014.9 velvet.61165 99.94 True fake: scaffold gap size wrong estimation (local) 42182051 42187978 379907 386361 NC_000014.9 velvet.61165 99.97 True relocation, scaffold gap is present, inconsistency = -70528 42131931 42132755 400842 401666 NC_000014.9 velvet.61165 99.88 True fake: scaffold gap size wrong estimation (local) 42132973 42137012 402697 406736 NC_000014.9 velvet.61165 99.93 True fake: scaffold gap size wrong estimation (local) 42163152 42166034 433856 436738 NC_000014.9 velvet.61165 99.97 True fake: scaffold gap size wrong estimation (local) 42168284 42168806 440104 440634 NC_000014.9 velvet.61165 95.17 True fake: scaffold gap size wrong estimation (local) 42171013 42171924 444931 445820 NC_000014.9 velvet.61165 96.74 True relocation, scaffold gap is present, inconsistency = 139908 42311843 42313305 447294 445831 NC_000014.9 velvet.61165 100.0 True local misassembly 42313333 42313903 448034 447464 NC_000014.9 velvet.61165 99.3 True relocation, scaffold gap is present, inconsistency = 98719 42189834 42199433 463215 472929 NC_000014.9 velvet.61165 99.9 True fake: scaffold gap size wrong estimation (local) 42199646 42200952 473708 475108 NC_000014.9 velvet.61165 99.92 True fake: not a misassembly (possible transposable element) 42276204 42278920 482877 480161 NC_000014.9 velvet.61165 99.93 True fake: not a misassembly (possible transposable element) 42207678 42209945 482888 485156 NC_000014.9 velvet.61165 99.91 True fake: scaffold gap size wrong estimation (local) 42210217 42215897 486170 492261 NC_000014.9 velvet.61165 99.88 True fake: scaffold gap size wrong estimation (local) 42216178 42216929 493110 493861 NC_000014.9 velvet.61165 100.0 True relocation, scaffold gap is present, inconsistency = 55810 42272750 42275139 496268 493872 NC_000014.9 velvet.61165 100.0 True relocation, scaffold gap is present, inconsistency = 65784 42200972 42202970 500264 502262 NC_000014.9 velvet.61165 99.95 True fake: scaffold gap size wrong estimation (local) 42203907 42204703 503820 504616 NC_000014.9 velvet.61165 98.75 True relocation, scaffold gap is present, inconsistency = 11897 42217182 42235044 505198 524102 NC_000014.9 velvet.61165 99.75 True inversion, scaffold gap is present 42240306 42246505 531123 524113 NC_000014.9 velvet.61165 99.27 True fake: not a misassembly (possible transposable element) 42237737 42238365 531134 531762 NC_000014.9 velvet.61165 99.68 True fake: not a misassembly (possible transposable element) 42238346 42240027 534621 532936 NC_000014.9 velvet.61165 99.64 True fake: scaffold gap size wrong estimation (local) 42236030 42237675 537826 536181 NC_000014.9 velvet.61165 99.82 True relocation, scaffold gap is present, inconsistency = 8838 42247616 42252609 538929 544127 NC_000014.9 velvet.61165 99.88 True fake: scaffold gap size wrong estimation (local) 42253687 42255285 546075 547673 NC_000014.9 velvet.61165 99.94 True fake: scaffold gap size wrong estimation (local) 42261534 42267579 547684 554551 NC_000014.9 velvet.61165 98.8 True indel: indel (> 5bp) 42267656 42271091 554673 558105 NC_000014.9 velvet.61165 99.77 True fake: scaffold gap size wrong estimation (local) 42271430 42272311 558931 559808 NC_000014.9 velvet.61165 98.86 True relocation, scaffold gap is present, inconsistency = -16707 42258656 42261253 562860 565692 NC_000014.9 velvet.61165 100.0 True relocation, scaffold gap is present, inconsistency = 9919522 52207306 52208207 593124 592223 NC_000014.9 velvet.61165 95.57 True local misassembly 52205930 52207120 594315 593125 NC_000014.9 velvet.61165 99.41 True fake: scaffold gap size wrong estimation (local) 52201824 52204970 599303 596133 NC_000014.9 velvet.61165 98.46 True fake: scaffold gap size wrong estimation (local) 52177036 52180353 624552 621233 NC_000014.9 velvet.61165 96.06 True fake: scaffold gap size wrong estimation (local) 52175046 52177020 628190 626216 NC_000014.9 velvet.61165 99.39 True fake: scaffold gap size wrong estimation (local) 52172447 52174041 631549 629967 NC_000014.9 velvet.61165 98.61 True fake: scaffold gap size wrong estimation (local) 52170924 52171836 633998 633086 NC_000014.9 velvet.61165 99.34 True relocation, scaffold gap is present, inconsistency = 9882040 42284995 42288082 634800 637889 NC_000014.9 velvet.61165 99.81 True fake: scaffold gap size wrong estimation (local) 42289219 42291913 639740 643023 NC_000014.9 velvet.61165 100.0 True fake: scaffold gap size wrong estimation (local) 42292916 42295660 644441 647235 NC_000014.9 velvet.61165 99.85 True relocation, scaffold gap is present, inconsistency = 9863519 52168947 52169779 657835 657003 NC_000014.9 velvet.61165 97.84 True relocation, scaffold gap is present, inconsistency = -33964 52200521 52201036 660225 659710 NC_000014.9 velvet.61165 99.61 True fake: scaffold gap size wrong estimation (local) 52197436 52199438 664083 662120 NC_000014.9 velvet.61165 97.84 True fake: scaffold gap size wrong estimation (local) 52195335 52196563 667073 665676 NC_000014.9 velvet.61165 96.69 True relocation, scaffold gap is present, inconsistency = 9874381 42309842 42311220 678185 676807 NC_000014.9 velvet.61165 100.0 True fake: scaffold gap size wrong estimation (local) 42307281 42309755 681259 678779 NC_000014.9 velvet.61165 99.72 True fake: scaffold gap size wrong estimation (local) 42306143 42307123 682456 681476 NC_000014.9 velvet.61165 99.9 True fake: scaffold gap size wrong estimation (local) 42298241 42305971 692399 683489 NC_000014.9 velvet.61165 99.95 True fake: scaffold gap size wrong estimation (local) 42295690 42296598 696239 695331 NC_000014.9 velvet.61165 100.0 True relocation, scaffold gap is present, inconsistency = -9870666 52165032 52166281 697561 696314 NC_000014.9 velvet.61165 99.28 True fake: scaffold gap size wrong estimation (local) 52163827 52164805 702089 701117 NC_000014.9 velvet.61165 99.07 True relocation, scaffold gap is present, inconsistency = 9838356 42313959 42319643 707917 713657 NC_000014.9 velvet.61165 98.94 True fake: scaffold gap size wrong estimation (local) 42319895 42326056 714579 721391 NC_000014.9 velvet.61165 99.89 True indel: indel (> 5bp) 42326119 42328615 721446 723942 NC_000014.9 velvet.61165 99.96 True fake: scaffold gap size wrong estimation (local) 42328898 42330100 724976 726226 NC_000014.9 velvet.61165 100.0 True fake: scaffold gap size wrong estimation (local) 42332177 42346745 726962 742047 NC_000014.9 velvet.61165 99.71 True fake: scaffold gap size wrong estimation (local) 42346993 42351105 743095 747379 NC_000014.9 velvet.61165 99.85 True relocation, scaffold gap is present, inconsistency = -20220 42330896 42331921 747390 748415 NC_000014.9 velvet.61165 99.81 True relocation, scaffold gap is present, inconsistency = 9794189 52130628 52134080 756385 752933 NC_000014.9 velvet.61165 99.51 True fake: scaffold gap size wrong estimation (local) 52129687 52130336 758119 757470 NC_000014.9 velvet.61165 99.54 True relocation, scaffold gap is present, inconsistency = 9776948 42351381 42352728 758130 759477 NC_000014.9 velvet.61165 99.78 True fake: scaffold gap size wrong estimation (local) 42352907 42356207 760276 764042 NC_000014.9 velvet.61165 99.91 True fake: scaffold gap size wrong estimation (local) 42356479 42359774 764484 768194 NC_000014.9 velvet.61165 99.6 True fake: scaffold gap size wrong estimation (local) 42359988 42361607 769163 770782 NC_000014.9 velvet.61165 100.0 True fake: scaffold gap size wrong estimation (local) 42361874 42366746 771210 776343 NC_000014.9 velvet.61165 99.85 True fake: scaffold gap size wrong estimation (local) 42367724 42372478 778051 783023 NC_000014.9 velvet.61165 99.96 True fake: scaffold gap size wrong estimation (local) 42372744 42380306 783587 791958 NC_000014.9 velvet.61165 99.97 True fake: scaffold gap size wrong estimation (local) 42380554 42393033 792856 806746 NC_000014.9 velvet.61165 99.54 True fake: scaffold gap size wrong estimation (local) 42394014 42397560 810184 813730 NC_000014.9 velvet.61165 99.97 True fake: scaffold gap size wrong estimation (local) 42397988 42404761 814594 821727 NC_000014.9 velvet.61165 99.93 True fake: scaffold gap size wrong estimation (local) 42406147 42409954 823121 826928 NC_000014.9 velvet.61165 99.95 True fake: scaffold gap size wrong estimation (local) 42410189 42410790 827680 828281 NC_000014.9 velvet.61165 100.0 True fake: scaffold gap size wrong estimation (local) 42411021 42424172 828655 842947 NC_000014.9 velvet.61165 99.31 True fake: scaffold gap size wrong estimation (local) 42430875 42431875 847879 848902 NC_000014.9 velvet.61165 96.03 True fake: scaffold gap size wrong estimation (local) 42437989 42439487 852437 853935 NC_000014.9 velvet.61165 99.8 True fake: scaffold gap size wrong estimation (local) 42439679 42444607 854913 859841 NC_000014.9 velvet.61165 100.0 True fake: scaffold gap size wrong estimation (local) 42444933 42445549 860624 861240 NC_000014.9 velvet.61165 99.84 True fake: scaffold gap size wrong estimation (local) 42445800 42465351 862023 882348 NC_000014.9 velvet.61165 99.47 True fake: scaffold gap size wrong estimation (local) 42486378 42491762 899390 905440 NC_000014.9 velvet.61165 99.94 True relocation, scaffold gap is present, inconsistency = 23811 42516308 42524777 915673 906175 NC_000014.9 velvet.61165 99.96 True fake: scaffold gap size wrong estimation (local) 42508077 42516022 925391 916703 NC_000014.9 velvet.61165 99.46 True relocation, scaffold gap is present, inconsistency = 8292 42492955 42499774 925402 933144 NC_000014.9 velvet.61165 99.36 True local misassembly 42501713 42502817 933145 934249 NC_000014.9 velvet.61165 99.92 True inversion, scaffold gap is present 42473718 42481496 957156 949257 NC_000014.9 velvet.61165 99.97 True fake: scaffold gap size wrong estimation (local) 42470582 42473474 961158 958213 NC_000014.9 velvet.61165 99.9 True fake: scaffold gap size wrong estimation (local) 42466028 42470290 966958 962193 NC_000014.9 velvet.61165 99.88 True CONTIG velvet.61165 967997 misassembled 32046373 32052078 433 6138 NC_000014.9 velvet.61178 99.95 True indel: indel (> 5bp) 32052238 32053338 6309 7409 NC_000014.9 velvet.61178 99.64 True fake: scaffold gap size wrong estimation (local) 32053434 32054531 9638 10735 NC_000014.9 velvet.61178 99.27 True local misassembly 32054651 32055727 10962 12038 NC_000014.9 velvet.61178 99.91 True fake: scaffold gap size wrong estimation (local) 32057485 32061337 14666 18518 NC_000014.9 velvet.61178 100.0 True inversion, scaffold gap is present 32067879 32070887 25801 22674 NC_000014.9 velvet.61178 96.1 True fake: scaffold gap size wrong estimation (local) 32066199 32067607 28070 26662 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 32064643 32066000 30058 28713 NC_000014.9 velvet.61178 98.9 True fake: scaffold gap size wrong estimation (local) 32061524 32063685 33818 31698 NC_000014.9 velvet.61178 98.04 True relocation, scaffold gap is present, inconsistency = -13641975 45692076 45703488 45271 33829 NC_000014.9 velvet.61178 99.27 True fake: scaffold gap size wrong estimation (local) 45669896 45672574 67242 64564 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 45664099 45668372 73824 69523 NC_000014.9 velvet.61178 99.16 True fake: scaffold gap size wrong estimation (local) 45661945 45663802 76675 74803 NC_000014.9 velvet.61178 97.3 True fake: not a misassembly (possible transposable element) 32032940 32035985 79731 76686 NC_000014.9 velvet.61178 99.9 True fake: not a misassembly (possible transposable element) 45660610 45661355 80523 79778 NC_000014.9 velvet.61178 99.87 True fake: scaffold gap size wrong estimation (local) 45657758 45658721 84200 83237 NC_000014.9 velvet.61178 100.0 True local misassembly 45658727 45659452 84953 84228 NC_000014.9 velvet.61178 99.86 True relocation, scaffold gap is present, inconsistency = 12911792 58571326 58573244 85035 86954 NC_000014.9 velvet.61178 99.58 True fake: scaffold gap size wrong estimation (local) 58573399 58578929 87834 94198 NC_000014.9 velvet.61178 99.91 True fake: scaffold gap size wrong estimation (local) 58579180 58579913 94550 95283 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 58603812 58606245 113487 115920 NC_000014.9 velvet.61178 99.84 True relocation, scaffold gap is present, inconsistency = 11334881 47268340 47268920 116511 115931 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 47258323 47268058 127512 117479 NC_000014.9 velvet.61178 99.33 True fake: scaffold gap size wrong estimation (local) 47248162 47248930 131235 130467 NC_000014.9 velvet.61178 99.87 True relocation, scaffold gap is present, inconsistency = 11366342 58615283 58616813 131246 132776 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = -37242 58583728 58585255 136933 138460 NC_000014.9 velvet.61178 99.87 True local misassembly 58585528 58586190 138461 139123 NC_000014.9 velvet.61178 98.49 True relocation, scaffold gap is present, inconsistency = 28186717 86772918 86773480 139696 139134 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 41139968 45628906 45631884 143698 140762 NC_000014.9 velvet.61178 98.54 True relocation, scaffold gap is present, inconsistency = 5732851 39895382 39895905 143848 144371 NC_000014.9 velvet.61178 99.62 True fake: scaffold gap size wrong estimation (local) 39895992 39896569 144507 145075 NC_000014.9 velvet.61178 97.89 True relocation, scaffold gap is present, inconsistency = 46894175 86791450 86807455 145781 162575 NC_000014.9 velvet.61178 99.83 True relocation, scaffold gap is present, inconsistency = 46318 86741667 86745121 166046 162586 NC_000014.9 velvet.61178 99.28 True fake: scaffold gap size wrong estimation (local) 86739378 86741415 169217 167180 NC_000014.9 velvet.61178 99.95 True fake: not a misassembly (possible transposable element) 86808097 86808984 169228 170115 NC_000014.9 velvet.61178 99.89 True fake: not a misassembly (possible transposable element) 86736815 86739118 172567 170264 NC_000014.9 velvet.61178 99.7 True relocation, scaffold gap is present, inconsistency = 70193 86809322 86809905 172578 173161 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 51510232 35294291 35295067 177960 177184 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 66635934 101931012 101932429 177971 179388 NC_000014.9 velvet.61178 99.51 True relocation, scaffold gap is present, inconsistency = -12162563 89769877 89772293 179399 181815 NC_000014.9 velvet.61178 99.92 True relocation, scaffold gap is present, inconsistency = 54475570 35291838 35294036 184284 182086 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 70017501 105311548 105314635 184295 187382 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 105315197 105318476 188784 192112 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 105319252 105320007 193751 194506 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 70043017 35272015 35275699 198728 195042 NC_000014.9 velvet.61178 99.84 True fake: scaffold gap size wrong estimation (local) 35268864 35270798 202609 200675 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 35266412 35267520 206261 205107 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 35264964 35265937 209002 208029 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 35260139 35261286 214179 213032 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 41873 35217532 35218255 214190 214913 NC_000014.9 velvet.61178 99.86 True fake: scaffold gap size wrong estimation (local) 35218801 35223477 216393 222472 NC_000014.9 velvet.61178 99.98 True fake: scaffold gap size wrong estimation (local) 35223761 35225394 222774 224407 NC_000014.9 velvet.61178 99.94 True fake: scaffold gap size wrong estimation (local) 35225868 35227190 225926 227297 NC_000014.9 velvet.61178 95.36 True fake: scaffold gap size wrong estimation (local) 35228160 35228841 228823 229504 NC_000014.9 velvet.61178 99.85 True fake: scaffold gap size wrong estimation (local) 35229367 35230067 230159 230859 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 35230182 35232206 231594 233606 NC_000014.9 velvet.61178 99.36 True relocation, scaffold gap is present, inconsistency = 23386220 58618437 58619036 233617 234216 NC_000014.9 velvet.61178 99.83 True fake: scaffold gap size wrong estimation (local) 58619637 58623311 235488 239216 NC_000014.9 velvet.61178 98.42 True relocation, scaffold gap is present, inconsistency = 12747123 71370445 71371447 239227 240229 NC_000014.9 velvet.61178 99.9 True relocation, scaffold gap is present, inconsistency = -4810248 66561436 66569418 240466 248707 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 66569630 66570316 249711 250397 NC_000014.9 velvet.61178 99.85 True relocation, scaffold gap is present, inconsistency = 36636042 29902262 29902831 281723 281154 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 29895312 29899449 290267 286019 NC_000014.9 velvet.61178 99.85 True relocation, scaffold gap is present, inconsistency = -62931404 92823540 92825645 293443 291338 NC_000014.9 velvet.61178 99.76 True fake: scaffold gap size wrong estimation (local) 92820949 92822679 296814 295084 NC_000014.9 velvet.61178 99.94 True fake: scaffold gap size wrong estimation (local) 92817189 92819979 301441 298562 NC_000014.9 velvet.61178 96.74 True relocation, scaffold gap is present, inconsistency = 47358200 45457660 45458978 301452 302816 NC_000014.9 velvet.61178 99.92 True fake: scaffold gap size wrong estimation (local) 45461039 45474590 305491 319115 NC_000014.9 velvet.61178 99.81 True relocation, scaffold gap is present, inconsistency = 34085781 79560833 79569628 319577 328698 NC_000014.9 velvet.61178 99.93 True fake: scaffold gap size wrong estimation (local) 79569913 79582220 329851 342959 NC_000014.9 velvet.61178 99.74 True fake: scaffold gap size wrong estimation (local) 79582704 79585431 344281 347008 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 79585714 79589017 348046 351405 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 33511855 46066677 46073848 358585 351416 NC_000014.9 velvet.61178 99.82 True fake: scaffold gap size wrong estimation (local) 46060710 46065126 365254 360770 NC_000014.9 velvet.61178 99.59 True fake: scaffold gap size wrong estimation (local) 46028254 46035962 395372 386862 NC_000014.9 velvet.61178 99.65 True fake: scaffold gap size wrong estimation (local) 46024175 46027983 400290 396157 NC_000014.9 velvet.61178 98.08 True fake: scaffold gap size wrong estimation (local) 46019539 46023399 405734 401856 NC_000014.9 velvet.61178 99.25 True relocation, scaffold gap is present, inconsistency = 33565060 79589255 79590305 406530 407580 NC_000014.9 velvet.61178 99.9 True fake: scaffold gap size wrong estimation (local) 79590446 79593377 408379 411310 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 79593658 79599739 412327 418407 NC_000014.9 velvet.61178 99.95 True fake: scaffold gap size wrong estimation (local) 79600001 79601062 419292 420353 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 79601336 79603932 421046 423725 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 19399081 99005426 99007969 426138 428681 NC_000014.9 velvet.61178 99.76 True local misassembly 99011471 99012921 428682 430132 NC_000014.9 velvet.61178 98.83 True indel: indel (> 5bp) 99012962 99013540 430133 430711 NC_000014.9 velvet.61178 98.1 True relocation, scaffold gap is present, inconsistency = -18185 98995366 99003083 430722 439394 NC_000014.9 velvet.61178 99.91 True relocation, scaffold gap is present, inconsistency = 33736560 65258294 65258795 439906 439405 NC_000014.9 velvet.61178 98.01 True fake: scaffold gap size wrong estimation (local) 65254875 65257088 444212 441999 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 65252021 65254308 447919 445632 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 19247485 45995081 45996232 457374 456223 NC_000014.9 velvet.61178 99.83 True fake: scaffold gap size wrong estimation (local) 45993378 45994813 459821 458386 NC_000014.9 velvet.61178 99.93 True fake: scaffold gap size wrong estimation (local) 45985229 45990982 469277 462734 NC_000014.9 velvet.61178 99.95 True relocation, scaffold gap is present, inconsistency = -19239282 65221343 65223122 472378 470666 NC_000014.9 velvet.61178 96.21 True fake: scaffold gap size wrong estimation (local) 65219789 65221103 474975 473661 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 19240740 45978501 45979038 475523 474986 NC_000014.9 velvet.61178 99.81 True fake: scaffold gap size wrong estimation (local) 45977050 45978236 477140 475912 NC_000014.9 velvet.61178 99.66 True relocation, scaffold gap is present, inconsistency = -19242156 65218235 65219195 478111 477151 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 65215939 65217962 480971 478948 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 65213863 65215457 483730 482136 NC_000014.9 velvet.61178 99.87 True fake: scaffold gap size wrong estimation (local) 65212223 65213182 486282 485323 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 19244930 45937300 45963337 517007 490238 NC_000014.9 velvet.61178 99.87 True fake: scaffold gap size wrong estimation (local) 45925839 45926478 529823 529184 NC_000014.9 velvet.61178 99.84 True relocation, scaffold gap is present, inconsistency = -19267266 65192402 65193094 530526 529834 NC_000014.9 velvet.61178 99.71 True fake: scaffold gap size wrong estimation (local) 65191129 65192134 532537 531532 NC_000014.9 velvet.61178 98.91 True local misassembly 65190174 65190871 533235 532538 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 65189286 65189890 534932 534328 NC_000014.9 velvet.61178 98.35 True local misassembly 65188358 65189048 535623 534933 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 65183653 65188075 540978 536568 NC_000014.9 velvet.61178 99.64 True fake: scaffold gap size wrong estimation (local) 65181294 65183363 544091 542022 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 65178921 65181007 547188 545173 NC_000014.9 velvet.61178 96.29 True relocation, scaffold gap is present, inconsistency = 8396280 56782072 56782630 547199 547757 NC_000014.9 velvet.61178 99.82 True relocation, scaffold gap is present, inconsistency = -29330772 27452477 27458961 548376 554860 NC_000014.9 velvet.61178 99.95 True local misassembly 27462487 27464728 554861 557102 NC_000014.9 velvet.61178 99.51 True relocation, scaffold gap is present, inconsistency = 37769350 65234383 65235651 558675 557407 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 65224542 65227722 561866 558686 NC_000014.9 velvet.61178 99.91 True relocation, scaffold gap is present, inconsistency = 37749243 27464820 27475083 562082 574035 NC_000014.9 velvet.61178 99.96 True fake: scaffold gap size wrong estimation (local) 27475375 27485200 575011 585681 NC_000014.9 velvet.61178 99.72 True fake: scaffold gap size wrong estimation (local) 27509463 27511364 605247 607662 NC_000014.9 velvet.61178 98.03 True relocation, scaffold gap is present, inconsistency = -13894 27497481 27502675 607673 612874 NC_000014.9 velvet.61178 99.81 True fake: scaffold gap size wrong estimation (local) 27503705 27504796 614638 615729 NC_000014.9 velvet.61178 99.08 True fake: scaffold gap size wrong estimation (local) 27519611 27524564 623675 629518 NC_000014.9 velvet.61178 99.82 True fake: scaffold gap size wrong estimation (local) 27524878 27529090 630606 634846 NC_000014.9 velvet.61178 99.27 True fake: scaffold gap size wrong estimation (local) 27529200 27535041 634923 640874 NC_000014.9 velvet.61178 98.97 True fake: scaffold gap size wrong estimation (local) 27563955 27570378 670601 677025 NC_000014.9 velvet.61178 99.84 True relocation, scaffold gap is present, inconsistency = 17802937 45399125 45405312 709022 702835 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 45398134 45398852 710732 710014 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = -11806 45405606 45409114 715184 711558 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 45394762 45396984 720874 718652 NC_000014.9 velvet.61178 99.73 True indel: indel (> 5bp) 45393723 45394761 721921 720883 NC_000014.9 velvet.61178 98.85 True fake: scaffold gap size wrong estimation (local) 45390841 45393142 725393 723092 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 45385087 45388991 732271 728157 NC_000014.9 velvet.61178 99.95 True fake: scaffold gap size wrong estimation (local) 45368975 45384184 750657 733908 NC_000014.9 velvet.61178 99.29 True fake: scaffold gap size wrong estimation (local) 45367429 45368872 752788 751345 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 45360914 45367326 759839 753426 NC_000014.9 velvet.61178 99.95 True fake: scaffold gap size wrong estimation (local) 45351958 45360645 769667 760841 NC_000014.9 velvet.61178 99.92 True fake: scaffold gap size wrong estimation (local) 45342835 45346173 773016 769678 NC_000014.9 velvet.61178 99.7 True fake: scaffold gap size wrong estimation (local) 45339708 45342834 779858 776732 NC_000014.9 velvet.61178 99.84 True fake: scaffold gap size wrong estimation (local) 45337598 45339419 782838 781017 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 45335502 45337502 785340 783340 NC_000014.9 velvet.61178 99.95 True fake: scaffold gap size wrong estimation (local) 45331618 45333700 790836 788354 NC_000014.9 velvet.61178 99.9 True fake: scaffold gap size wrong estimation (local) 45329803 45331176 792886 791513 NC_000014.9 velvet.61178 99.93 True fake: scaffold gap size wrong estimation (local) 45327429 45329524 795923 793828 NC_000014.9 velvet.61178 99.86 True local misassembly 45326620 45327355 796905 796170 NC_000014.9 velvet.61178 99.86 True fake: scaffold gap size wrong estimation (local) 45296244 45297374 826754 825624 NC_000014.9 velvet.61178 99.91 True fake: scaffold gap size wrong estimation (local) 45294406 45295015 829632 829023 NC_000014.9 velvet.61178 98.36 True fake: scaffold gap size wrong estimation (local) 45291484 45292853 833133 831803 NC_000014.9 velvet.61178 97.13 True relocation, scaffold gap is present, inconsistency = -11173 45297434 45301837 839090 833953 NC_000014.9 velvet.61178 98.73 True relocation, scaffold gap is present, inconsistency = -22765 45318008 45320188 841281 839101 NC_000014.9 velvet.61178 100.0 True indel: indel (<= 5bp) 45317190 45317854 842098 841434 NC_000014.9 velvet.61178 99.7 True fake: scaffold gap size wrong estimation (local) 45316090 45317024 843863 842929 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 45312160 45315992 847974 844142 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 45307372 45310227 857113 854258 NC_000014.9 velvet.61178 99.96 True fake: scaffold gap size wrong estimation (local) 45302573 45306796 862064 857841 NC_000014.9 velvet.61178 99.91 True relocation, scaffold gap is present, inconsistency = -24433069 69707705 69715286 890078 882420 NC_000014.9 velvet.61178 99.95 True relocation, scaffold gap is present, inconsistency = 14028042 55677999 55678772 890969 891742 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 55678949 55685047 892273 898501 NC_000014.9 velvet.61178 99.92 True fake: scaffold gap size wrong estimation (local) 55685180 55688047 899380 902244 NC_000014.9 velvet.61178 99.79 True relocation, scaffold gap is present, inconsistency = -35357 55652701 55655103 902255 904994 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 55655276 55656494 905787 907005 NC_000014.9 velvet.61178 99.92 True local misassembly 55656748 55657408 907006 907666 NC_000014.9 velvet.61178 98.49 True fake: scaffold gap size wrong estimation (local) 55657907 55659307 908913 910313 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 55665024 55677222 910340 922688 NC_000014.9 velvet.61178 99.97 True relocation, scaffold gap is present, inconsistency = -58899 55621336 55621865 925701 926230 NC_000014.9 velvet.61178 99.43 True fake: scaffold gap size wrong estimation (local) 55622151 55627470 926331 931899 NC_000014.9 velvet.61178 99.96 True fake: scaffold gap size wrong estimation (local) 55627847 55629160 932779 934092 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 55629449 55631375 934943 936865 NC_000014.9 velvet.61178 99.79 True fake: scaffold gap size wrong estimation (local) 55659340 55662087 963986 966804 NC_000014.9 velvet.61178 99.93 True fake: scaffold gap size wrong estimation (local) 55662359 55665005 967819 970465 NC_000014.9 velvet.61178 99.96 True fake: scaffold gap size wrong estimation (local) 55688472 55689797 994816 996141 NC_000014.9 velvet.61178 99.17 True fake: scaffold gap size wrong estimation (local) 55689798 55690574 997300 998076 NC_000014.9 velvet.61178 97.55 True fake: scaffold gap size wrong estimation (local) 55697016 55700705 998087 1001776 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = -10133 55690583 55696374 1001787 1007560 NC_000014.9 velvet.61178 99.62 True fake: scaffold gap size wrong estimation (extensive) 55703732 55706716 1007571 1010555 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 23030764 78755191 78756214 1029289 1028266 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 78752351 78754830 1032927 1030448 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 23016048 55732767 55736292 1032938 1036463 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = -21920 55714383 55715211 1036474 1037302 NC_000014.9 velvet.61178 99.88 True relocation, scaffold gap is present, inconsistency = 23040295 78760308 78765159 1046955 1042104 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 78757410 78760025 1050675 1048060 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 78756549 78757275 1052259 1051533 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 22938103 55817316 55818435 1053373 1052270 NC_000014.9 velvet.61178 98.4 True fake: scaffold gap size wrong estimation (local) 55813456 55817070 1058717 1054250 NC_000014.9 velvet.61178 99.97 True fake: scaffold gap size wrong estimation (local) 55784767 55787339 1083760 1081198 NC_000014.9 velvet.61178 99.57 True relocation, scaffold gap is present, inconsistency = 26788327 28994970 28996429 1083771 1085230 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 49730344 78726784 78727457 1085962 1085241 NC_000014.9 velvet.61178 99.25 True relocation, scaffold gap is present, inconsistency = 22931694 55779866 55784284 1096768 1101213 NC_000014.9 velvet.61178 97.85 True relocation, scaffold gap is present, inconsistency = 26778944 28999430 29000567 1102705 1101568 NC_000014.9 velvet.61178 99.91 True fake: scaffold gap size wrong estimation (local) 28998067 28999343 1105051 1103776 NC_000014.9 velvet.61178 99.77 True relocation, scaffold gap is present, inconsistency = -57169146 86158205 86166175 1115235 1106089 NC_000014.9 velvet.61178 99.75 True fake: scaffold gap size wrong estimation (local) 86152431 86157362 1122412 1116724 NC_000014.9 velvet.61178 98.27 True fake: scaffold gap size wrong estimation (local) 86146358 86151969 1129304 1123693 NC_000014.9 velvet.61178 99.91 True fake: not a misassembly (possible transposable element) 60430256 60433570 1132621 1129315 NC_000014.9 velvet.61178 99.73 True fake: not a misassembly (possible transposable element) 86144260 86146106 1134478 1132632 NC_000014.9 velvet.61178 99.78 True fake: scaffold gap size wrong estimation (local) 86142720 86143901 1136942 1135761 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 57008614 29132520 29133785 1138528 1137263 NC_000014.9 velvet.61178 99.92 True fake: scaffold gap size wrong estimation (local) 29125798 29131929 1146172 1139960 NC_000014.9 velvet.61178 99.93 True fake: scaffold gap size wrong estimation (local) 29122127 29125244 1150374 1147089 NC_000014.9 velvet.61178 99.81 True fake: scaffold gap size wrong estimation (local) 29115276 29121003 1157965 1152238 NC_000014.9 velvet.61178 99.83 True fake: scaffold gap size wrong estimation (local) 29113359 29114656 1160488 1159191 NC_000014.9 velvet.61178 99.85 True fake: scaffold gap size wrong estimation (local) 29106456 29108142 1162185 1160499 NC_000014.9 velvet.61178 99.88 True fake: scaffold gap size wrong estimation (local) 29096358 29106455 1174555 1164458 NC_000014.9 velvet.61178 99.73 True fake: scaffold gap size wrong estimation (local) 29095730 29096357 1175545 1174918 NC_000014.9 velvet.61178 99.84 True fake: scaffold gap size wrong estimation (local) 29077126 29094987 1195740 1176838 NC_000014.9 velvet.61178 98.42 True fake: scaffold gap size wrong estimation (local) 29074498 29076936 1199103 1196665 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 29073396 29074444 1201006 1199958 NC_000014.9 velvet.61178 99.71 True fake: scaffold gap size wrong estimation (local) 29069160 29071671 1206102 1203592 NC_000014.9 velvet.61178 99.88 True fake: scaffold gap size wrong estimation (local) 29060571 29068951 1215619 1207142 NC_000014.9 velvet.61178 99.94 True fake: scaffold gap size wrong estimation (local) 29047318 29060461 1229994 1216464 NC_000014.9 velvet.61178 99.96 True fake: scaffold gap size wrong estimation (local) 29028177 29046121 1250113 1232065 NC_000014.9 velvet.61178 99.85 True fake: scaffold gap size wrong estimation (local) 29018487 29022120 1258730 1255097 NC_000014.9 velvet.61178 99.97 True fake: scaffold gap size wrong estimation (local) 29015925 29017481 1262062 1260506 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 29007418 29015117 1271397 1263698 NC_000014.9 velvet.61178 99.97 True fake: scaffold gap size wrong estimation (local) 29005418 29007133 1274181 1272466 NC_000014.9 velvet.61178 99.94 True relocation, scaffold gap is present, inconsistency = -12685360 41683525 41685516 1281434 1279443 NC_000014.9 velvet.61178 99.45 True fake: scaffold gap size wrong estimation (local) 41682091 41683524 1283159 1281726 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 41675608 41681778 1290398 1284228 NC_000014.9 velvet.61178 99.98 True fake: scaffold gap size wrong estimation (local) 41671845 41673025 1294764 1293584 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 41670307 41671606 1296532 1295233 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 41660181 41670140 1307276 1297261 NC_000014.9 velvet.61178 99.99 True fake: scaffold gap size wrong estimation (local) 41654187 41659237 1314122 1308984 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 41653189 41653958 1315628 1314859 NC_000014.9 velvet.61178 99.61 True fake: scaffold gap size wrong estimation (local) 41650273 41652970 1318798 1316059 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 41649175 41650112 1320357 1319420 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 41645427 41648995 1324664 1321095 NC_000014.9 velvet.61178 99.83 True fake: scaffold gap size wrong estimation (local) 41632546 41645255 1338373 1325644 NC_000014.9 velvet.61178 99.54 True fake: scaffold gap size wrong estimation (local) 41628532 41632298 1343958 1339344 NC_000014.9 velvet.61178 99.95 True fake: scaffold gap size wrong estimation (local) 41613402 41628476 1360696 1343969 NC_000014.9 velvet.61178 99.91 True fake: scaffold gap size wrong estimation (local) 41606872 41610656 1364658 1360707 NC_000014.9 velvet.61178 99.89 True local misassembly 41610778 41613257 1367148 1364669 NC_000014.9 velvet.61178 99.96 True relocation, scaffold gap is present, inconsistency = 12638899 28971066 28971868 1367961 1367159 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 28962383 28970984 1376823 1368092 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 7290 28952010 28955082 1376834 1379906 NC_000014.9 velvet.61178 99.84 True relocation, scaffold gap is present, inconsistency = 12643347 41600142 41601044 1382509 1381619 NC_000014.9 velvet.61178 98.56 True fake: not a misassembly (possible transposable element) 64058772 64064565 1382520 1388502 NC_000014.9 velvet.61178 97.8 True fake: not a misassembly (possible transposable element) 41595952 41597804 1390365 1388513 NC_000014.9 velvet.61178 99.95 True fake: scaffold gap size wrong estimation (local) 41592916 41595671 1394153 1391429 NC_000014.9 velvet.61178 98.85 True fake: not a misassembly (possible transposable element) 64065156 64066272 1394788 1395904 NC_000014.9 velvet.61178 99.82 True fake: not a misassembly (possible transposable element) 41590737 41592390 1397661 1396078 NC_000014.9 velvet.61178 95.24 True fake: scaffold gap size wrong estimation (local) 41588016 41590546 1401350 1398820 NC_000014.9 velvet.61178 99.96 True fake: scaffold gap size wrong estimation (local) 41583571 41587869 1406565 1402246 NC_000014.9 velvet.61178 99.03 True relocation, scaffold gap is present, inconsistency = 22485232 64074911 64075612 1408375 1409076 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = -9431 64066508 64068608 1409403 1411503 NC_000014.9 velvet.61178 99.86 True relocation, scaffold gap is present, inconsistency = 15409 64094320 64099740 1427226 1421806 NC_000014.9 velvet.61178 99.96 True fake: scaffold gap size wrong estimation (local) 64089380 64094045 1432928 1428263 NC_000014.9 velvet.61178 99.91 True fake: scaffold gap size wrong estimation (local) 64088495 64089091 1434656 1434060 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64087094 64087910 1435850 1435034 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 29671 64117984 64118614 1436253 1436883 NC_000014.9 velvet.61178 100.0 True local misassembly 64118884 64120508 1436884 1438508 NC_000014.9 velvet.61178 99.38 True relocation, scaffold gap is present, inconsistency = -17134 64103385 64104467 1438519 1439601 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64104754 64105819 1440194 1441259 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 22546882 41554983 41557626 1444148 1441505 NC_000014.9 velvet.61178 99.96 True relocation, scaffold gap is present, inconsistency = 22563579 64121471 64122846 1444414 1445789 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64123132 64123900 1446242 1447010 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = -18459 64106660 64108127 1448229 1449696 NC_000014.9 velvet.61178 100.0 True local misassembly 64108335 64108931 1449697 1450293 NC_000014.9 velvet.61178 98.32 True relocation, scaffold gap is present, inconsistency = 16061 64125003 64127006 1450304 1452307 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64127398 64129265 1453320 1455187 NC_000014.9 velvet.61178 100.0 True indel: indel (> 5bp) 64129287 64130637 1455188 1456538 NC_000014.9 velvet.61178 99.26 True local misassembly 64130904 64131585 1456539 1457220 NC_000014.9 velvet.61178 98.53 True fake: scaffold gap size wrong estimation (local) 64133225 64134731 1459389 1460895 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64135005 64136032 1461310 1462337 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64136321 64137254 1463112 1464045 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64137546 64138225 1464515 1465194 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64139714 64140332 1467047 1467665 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64140570 64144943 1468497 1472870 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64145539 64150000 1474250 1479441 NC_000014.9 velvet.61178 99.17 True fake: scaffold gap size wrong estimation (local) 64161377 64163987 1484597 1487187 NC_000014.9 velvet.61178 99.23 True fake: scaffold gap size wrong estimation (local) 64165814 64166689 1490016 1490891 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64166892 64168151 1491336 1492595 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64168382 64171900 1493535 1497053 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64172153 64173662 1497956 1499465 NC_000014.9 velvet.61178 99.93 True fake: scaffold gap size wrong estimation (local) 64174364 64176799 1500926 1503361 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64179441 64180520 1506435 1507514 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 40383 64220914 64222504 1507525 1509115 NC_000014.9 velvet.61178 99.94 True fake: scaffold gap size wrong estimation (local) 64222736 64224101 1509561 1510883 NC_000014.9 velvet.61178 96.83 True relocation, scaffold gap is present, inconsistency = -8516 64215596 64216772 1510894 1512070 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64217009 64217751 1512174 1512916 NC_000014.9 velvet.61178 100.0 True indel: indel (> 5bp) 64217762 64219122 1512917 1514277 NC_000014.9 velvet.61178 99.27 True fake: scaffold gap size wrong estimation (local) 64224344 64224939 1514552 1515147 NC_000014.9 velvet.61178 99.83 True fake: scaffold gap size wrong estimation (local) 64224940 64226811 1515206 1517077 NC_000014.9 velvet.61178 98.93 True relocation, inconsistency = -7667 64219149 64220882 1517082 1518815 NC_000014.9 velvet.61178 99.65 True fake: scaffold gap size wrong estimation (local) 64226989 64230129 1518826 1521997 NC_000014.9 velvet.61178 98.9 True relocation, scaffold gap is present, inconsistency = 50065 64280205 64280821 1522624 1522008 NC_000014.9 velvet.61178 98.38 True indel: indel (> 5bp) 64279381 64280193 1523437 1522625 NC_000014.9 velvet.61178 98.77 True indel: indel (> 5bp) 64277965 64279306 1524779 1523438 NC_000014.9 velvet.61178 98.96 True relocation, scaffold gap is present, inconsistency = 63514 64207580 64211029 1528201 1531699 NC_000014.9 velvet.61178 99.97 True relocation, scaffold gap is present, inconsistency = -11300 64199740 64206845 1531710 1539187 NC_000014.9 velvet.61178 99.99 True relocation, scaffold gap is present, inconsistency = 13402220 77622134 77623079 1552256 1553201 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 13347093 64274206 64275030 1554036 1553212 NC_000014.9 velvet.61178 100.0 True fake: not a misassembly (possible transposable element) 59876907 59878629 1555845 1554119 NC_000014.9 velvet.61178 99.94 True fake: not a misassembly (possible transposable element) 64273012 64273867 1556711 1555856 NC_000014.9 velvet.61178 98.71 True indel: indel (> 5bp) 64272183 64272926 1557455 1556712 NC_000014.9 velvet.61178 99.6 True fake: scaffold gap size wrong estimation (local) 64267885 64270563 1562163 1559485 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64258219 64261208 1565388 1562399 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64254829 64257949 1569632 1566283 NC_000014.9 velvet.61178 99.93 True fake: scaffold gap size wrong estimation (local) 64253603 64254542 1571425 1570486 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 4392400 59854641 59859598 1578883 1573030 NC_000014.9 velvet.61178 99.32 True fake: scaffold gap size wrong estimation (local) 59851856 59853850 1582466 1580472 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 4387349 64241210 64242157 1582477 1583424 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64245544 64246086 1584710 1585252 NC_000014.9 velvet.61178 99.82 True local misassembly 64243324 64244142 1585263 1586081 NC_000014.9 velvet.61178 100.0 True local misassembly 64244406 64245290 1586082 1586966 NC_000014.9 velvet.61178 98.87 True fake: scaffold gap size wrong estimation (local) 64246687 64248433 1588082 1589777 NC_000014.9 velvet.61178 97.05 True fake: scaffold gap size wrong estimation (local) 64248555 64252923 1590699 1595922 NC_000014.9 velvet.61178 99.49 True relocation, scaffold gap is present, inconsistency = 7686 64237808 64240858 1598983 1595933 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64231155 64236939 1606459 1600675 NC_000014.9 velvet.61178 99.93 True fake: scaffold gap size wrong estimation (local) 64230199 64230848 1607912 1607263 NC_000014.9 velvet.61178 99.85 True relocation, scaffold gap is present, inconsistency = 44863 64275722 64276931 1607923 1609132 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = -4397687 59879255 59881943 1609143 1611831 NC_000014.9 velvet.61178 99.81 True fake: scaffold gap size wrong estimation (local) 59882113 59890984 1612956 1621827 NC_000014.9 velvet.61178 99.94 True relocation, scaffold gap is present, inconsistency = 2608751 62499746 62502496 1621838 1624588 NC_000014.9 velvet.61178 99.93 True fake: scaffold gap size wrong estimation (local) 62502740 62506060 1625633 1628953 NC_000014.9 velvet.61178 99.91 True relocation, scaffold gap is present, inconsistency = 1781005 64289510 64290518 1631398 1632406 NC_000014.9 velvet.61178 99.7 True local misassembly 64290548 64295792 1632652 1637940 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64296074 64299007 1639020 1641953 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64299662 64300505 1643434 1644277 NC_000014.9 velvet.61178 99.88 True fake: scaffold gap size wrong estimation (local) 64300739 64302174 1644411 1645846 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64303398 64304056 1647965 1648623 NC_000014.9 velvet.61178 97.72 True fake: scaffold gap size wrong estimation (local) 64306243 64307226 1651386 1652369 NC_000014.9 velvet.61178 99.9 True fake: scaffold gap size wrong estimation (local) 64308843 64309377 1654983 1655517 NC_000014.9 velvet.61178 99.81 True fake: scaffold gap size wrong estimation (local) 64310767 64311395 1658221 1658849 NC_000014.9 velvet.61178 100.0 True local misassembly 64311699 64312430 1658850 1659581 NC_000014.9 velvet.61178 98.63 True fake: scaffold gap size wrong estimation (local) 64313922 64314624 1662292 1662994 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64317572 64318284 1666529 1667241 NC_000014.9 velvet.61178 98.6 True relocation, scaffold gap is present, inconsistency = 11100 64338715 64339673 1676572 1677530 NC_000014.9 velvet.61178 99.9 True fake: scaffold gap size wrong estimation (local) 64340493 64342755 1679178 1681440 NC_000014.9 velvet.61178 99.82 True fake: scaffold gap size wrong estimation (local) 64342979 64344575 1682531 1684067 NC_000014.9 velvet.61178 96.16 True relocation, scaffold gap is present, inconsistency = -63109 64281481 64282106 1684082 1684707 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64285732 64286353 1689252 1689885 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 10731 64318865 64320317 1711666 1713172 NC_000014.9 velvet.61178 95.7 True fake: scaffold gap size wrong estimation (extensive) 64331852 64332549 1717506 1718203 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = -11218 64321342 64322102 1718214 1718953 NC_000014.9 velvet.61178 97.2 True fake: scaffold gap size wrong estimation (local) 64322358 64323237 1719095 1719969 NC_000014.9 velvet.61178 99.32 True fake: scaffold gap size wrong estimation (local) 64323993 64326004 1721569 1723580 NC_000014.9 velvet.61178 99.4 True fake: scaffold gap size wrong estimation (local) 64326005 64327325 1726028 1727348 NC_000014.9 velvet.61178 99.32 True fake: scaffold gap size wrong estimation (local) 64328433 64329528 1729716 1730794 NC_000014.9 velvet.61178 98.43 True fake: scaffold gap size wrong estimation (local) 64330948 64331598 1733249 1733899 NC_000014.9 velvet.61178 98.46 True fake: scaffold gap size wrong estimation (local) 64349578 64350602 1747789 1748813 NC_000014.9 velvet.61178 99.8 True fake: scaffold gap size wrong estimation (local) 64357903 64358556 1758189 1758841 NC_000014.9 velvet.61178 99.85 True local misassembly 64354509 64355040 1759767 1760298 NC_000014.9 velvet.61178 98.12 True fake: scaffold gap size wrong estimation (local) 64356537 64357677 1762692 1763832 NC_000014.9 velvet.61178 99.91 True fake: scaffold gap size wrong estimation (local) 64389723 64390326 1792228 1792831 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64391452 64393147 1795060 1796755 NC_000014.9 velvet.61178 99.35 True relocation, scaffold gap is present, inconsistency = 10583 64419405 64421632 1812430 1814657 NC_000014.9 velvet.61178 99.91 True fake: scaffold gap size wrong estimation (local) 64426772 64428125 1814668 1815962 NC_000014.9 velvet.61178 95.61 True relocation, scaffold gap is present, inconsistency = 40601416 23821411 23822409 1819903 1818909 NC_000014.9 velvet.61178 99.49 True fake: scaffold gap size wrong estimation (local) 23819929 23820611 1821233 1820551 NC_000014.9 velvet.61178 99.85 True fake: scaffold gap size wrong estimation (extensive) 23811404 23811993 1821833 1821244 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = -8962 23816188 23819354 1826011 1822845 NC_000014.9 velvet.61178 99.94 True relocation, scaffold gap is present, inconsistency = 9660 23846199 23847256 1843196 1844327 NC_000014.9 velvet.61178 96.26 True fake: scaffold gap size wrong estimation (local) 23847980 23853740 1845868 1852343 NC_000014.9 velvet.61178 99.25 True fake: scaffold gap size wrong estimation (local) 23854020 23855692 1853356 1855028 NC_000014.9 velvet.61178 99.94 True fake: scaffold gap size wrong estimation (local) 23855988 23856860 1855826 1856698 NC_000014.9 velvet.61178 99.89 True fake: scaffold gap size wrong estimation (local) 23858253 23870618 1858820 1871191 NC_000014.9 velvet.61178 99.82 True fake: scaffold gap size wrong estimation (local) 23875081 23878160 1878401 1881429 NC_000014.9 velvet.61178 98.11 True fake: scaffold gap size wrong estimation (local) 23878427 23880304 1882533 1884366 NC_000014.9 velvet.61178 97.54 True fake: scaffold gap size wrong estimation (extensive) 23887428 23890530 1884377 1887466 NC_000014.9 velvet.61178 99.45 True relocation, scaffold gap is present, inconsistency = -8809 23883053 23886655 1888798 1892394 NC_000014.9 velvet.61178 99.83 True fake: scaffold gap size wrong estimation (local) 23891078 23891603 1893387 1893912 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 23904741 23908414 1906396 1910069 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 23908560 23913301 1911008 1915731 NC_000014.9 velvet.61178 99.58 True fake: scaffold gap size wrong estimation (local) 23913555 23915112 1916616 1918173 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 23915618 23918732 1919367 1922511 NC_000014.9 velvet.61178 98.92 True fake: scaffold gap size wrong estimation (local) 23935770 23936778 1935921 1936929 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 23937077 23940365 1937999 1941285 NC_000014.9 velvet.61178 99.85 True fake: scaffold gap size wrong estimation (local) 23940650 23943108 1942308 1944986 NC_000014.9 velvet.61178 96.98 True fake: scaffold gap size wrong estimation (local) 23943976 23944594 1946307 1946925 NC_000014.9 velvet.61178 98.71 True relocation, scaffold gap is present, inconsistency = 66919356 90880078 90881064 1963053 1964210 NC_000014.9 velvet.61178 99.9 True fake: scaffold gap size wrong estimation (local) 90881839 90882841 1965390 1966392 NC_000014.9 velvet.61178 99.9 True fake: scaffold gap size wrong estimation (local) 90883080 90885026 1967312 1969258 NC_000014.9 velvet.61178 99.95 True fake: scaffold gap size wrong estimation (local) 90885792 90887705 1970857 1972779 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 90887990 90889040 1973579 1974629 NC_000014.9 velvet.61178 99.9 True fake: scaffold gap size wrong estimation (local) 90889325 90892012 1975450 1978137 NC_000014.9 velvet.61178 99.93 True fake: scaffold gap size wrong estimation (local) 90892302 90895173 1979181 1982052 NC_000014.9 velvet.61178 99.97 True fake: scaffold gap size wrong estimation (local) 90895324 90896761 1982690 1984140 NC_000014.9 velvet.61178 98.06 True fake: scaffold gap size wrong estimation (local) 90897011 90901157 1984876 1989695 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 90901353 90902065 1990263 1990974 NC_000014.9 velvet.61178 99.86 True fake: scaffold gap size wrong estimation (extensive) 90913178 90914307 1993427 1994556 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 90914615 90915573 1994849 1995807 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 90915677 90920943 1996614 2002143 NC_000014.9 velvet.61178 99.88 True fake: scaffold gap size wrong estimation (local) 90921036 90922506 2002816 2004286 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 90922729 90925635 2005055 2007953 NC_000014.9 velvet.61178 99.59 True fake: scaffold gap size wrong estimation (local) 90926422 90927933 2009496 2010978 NC_000014.9 velvet.61178 98.0 True fake: scaffold gap size wrong estimation (local) 90928118 90932168 2011596 2016550 NC_000014.9 velvet.61178 99.87 True fake: scaffold gap size wrong estimation (local) 90932427 90937797 2017506 2023208 NC_000014.9 velvet.61178 99.92 True relocation, scaffold gap is present, inconsistency = -66931363 24010539 24015352 2027313 2032213 NC_000014.9 velvet.61178 99.69 True relocation, scaffold gap is present, inconsistency = -43873 23977093 23977668 2037827 2038402 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 66967972 90964950 90970905 2057712 2063712 NC_000014.9 velvet.61178 99.88 True fake: scaffold gap size wrong estimation (local) 90976224 90977816 2063740 2065332 NC_000014.9 velvet.61178 99.94 True fake: scaffold gap size wrong estimation (local) 90978051 90980920 2066351 2069220 NC_000014.9 velvet.61178 99.9 True relocation, scaffold gap is present, inconsistency = -9630 90971301 90973214 2069231 2071144 NC_000014.9 velvet.61178 99.84 True fake: scaffold gap size wrong estimation (local) 90974112 90976222 2072805 2074915 NC_000014.9 velvet.61178 99.95 True relocation, scaffold gap is present, inconsistency = -66958920 24046640 24047303 2104253 2104916 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = -10788 24066045 24068146 2134446 2136547 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 24068438 24085981 2137343 2155636 NC_000014.9 velvet.61178 99.97 True relocation, scaffold gap is present, inconsistency = 40339519 64425511 64426494 2155647 2156630 NC_000014.9 velvet.61178 100.0 True local misassembly 64421927 64423441 2157718 2159232 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64428825 64430354 2159506 2161035 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64431344 64432986 2162864 2164506 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64434023 64434835 2166402 2167244 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = -19820 64415125 64415999 2167354 2168228 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64416282 64418243 2169578 2171539 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64423995 64425209 2172046 2173260 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64447301 64448814 2199198 2200707 NC_000014.9 velvet.61178 99.74 True fake: scaffold gap size wrong estimation (local) 64449099 64449832 2202482 2203215 NC_000014.9 velvet.61178 100.0 True local misassembly 64450072 64450763 2203216 2203907 NC_000014.9 velvet.61178 98.55 True relocation, scaffold gap is present, inconsistency = -71862 64397588 64398163 2222594 2223169 NC_000014.9 velvet.61178 99.83 True local misassembly 64398561 64399413 2223320 2224172 NC_000014.9 velvet.61178 98.83 True fake: scaffold gap size wrong estimation (local) 64400634 64401450 2226400 2227216 NC_000014.9 velvet.61178 99.76 True local misassembly 64401721 64402748 2227217 2228244 NC_000014.9 velvet.61178 98.93 True fake: scaffold gap size wrong estimation (local) 64403705 64404723 2230228 2231246 NC_000014.9 velvet.61178 99.8 True fake: scaffold gap size wrong estimation (local) 64404947 64406021 2236730 2237804 NC_000014.9 velvet.61178 99.81 True fake: scaffold gap size wrong estimation (local) 64408973 64410231 2241286 2242528 NC_000014.9 velvet.61178 98.62 True fake: scaffold gap size wrong estimation (local) 64410468 64411651 2244061 2245244 NC_000014.9 velvet.61178 99.92 True local misassembly 64411882 64412654 2245245 2246017 NC_000014.9 velvet.61178 98.58 True fake: scaffold gap size wrong estimation (local) 64413323 64413938 2247742 2248357 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64441836 64446566 2275394 2280124 NC_000014.9 velvet.61178 99.94 True relocation, scaffold gap is present, inconsistency = -11546 64435212 64436129 2280316 2281233 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64436396 64437915 2282168 2283687 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64438069 64439646 2284228 2285805 NC_000014.9 velvet.61178 99.94 True fake: scaffold gap size wrong estimation (local) 64439920 64440937 2286404 2287420 NC_000014.9 velvet.61178 99.9 True fake: scaffold gap size wrong estimation (local) 64454567 64457472 2296178 2299083 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64457755 64460517 2300145 2302900 NC_000014.9 velvet.61178 99.67 True fake: scaffold gap size wrong estimation (local) 64461024 64461590 2304122 2304688 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64462216 64463252 2305381 2306417 NC_000014.9 velvet.61178 99.04 True fake: scaffold gap size wrong estimation (local) 64463726 64470345 2306916 2314449 NC_000014.9 velvet.61178 99.63 True relocation, scaffold gap is present, inconsistency = -19034 64451322 64452055 2314460 2315193 NC_000014.9 velvet.61178 100.0 True local misassembly 64452278 64452945 2315194 2315861 NC_000014.9 velvet.61178 98.5 True fake: scaffold gap size wrong estimation (local) 64453583 64454177 2318320 2318914 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64471456 64475175 2332227 2335946 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64475504 64476360 2336662 2337518 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64476620 64480069 2338306 2341755 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64481338 64482217 2343631 2344510 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64482471 64483309 2345074 2345912 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64484645 64486063 2347811 2349229 NC_000014.9 velvet.61178 97.32 True relocation, scaffold gap is present, inconsistency = -29164590 35322454 35323034 2350210 2350781 NC_000014.9 velvet.61178 98.45 True relocation, scaffold gap is present, inconsistency = 15958053 51281098 51287082 2357335 2350792 NC_000014.9 velvet.61178 95.7 True fake: scaffold gap size wrong estimation (local) 51279801 51280804 2358911 2357908 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 51278117 51278807 2361186 2360496 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 13212643 64491461 64492116 2361197 2361852 NC_000014.9 velvet.61178 100.0 True local misassembly 64490263 64491214 2362309 2363260 NC_000014.9 velvet.61178 100.0 True fake: not a misassembly (possible transposable element) 102493608 102494288 2363271 2363951 NC_000014.9 velvet.61178 99.85 True fake: not a misassembly (possible transposable element) 64492633 64494437 2365479 2367328 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = -13236432 51258016 51262071 2367339 2371496 NC_000014.9 velvet.61178 99.9 True fake: scaffold gap size wrong estimation (local) 51262304 51263689 2372127 2373510 NC_000014.9 velvet.61178 99.86 True fake: scaffold gap size wrong estimation (local) 51263781 51266836 2374241 2377346 NC_000014.9 velvet.61178 99.97 True inversion, scaffold gap is present 51257092 51257721 2385281 2384652 NC_000014.9 velvet.61178 99.84 True fake: scaffold gap size wrong estimation (local) 51250763 51256956 2392031 2385770 NC_000014.9 velvet.61178 99.95 True fake: scaffold gap size wrong estimation (local) 51247643 51250473 2395944 2393064 NC_000014.9 velvet.61178 99.93 True fake: scaffold gap size wrong estimation (local) 51230168 51234610 2410226 2405724 NC_000014.9 velvet.61178 99.82 True fake: scaffold gap size wrong estimation (local) 51226605 51229930 2414552 2411227 NC_000014.9 velvet.61178 99.79 True fake: scaffold gap size wrong estimation (local) 51223846 51226148 2418152 2415787 NC_000014.9 velvet.61178 96.49 True relocation, scaffold gap is present, inconsistency = -50388379 101608352 101610198 2422025 2420179 NC_000014.9 velvet.61178 99.78 True fake: scaffold gap size wrong estimation (local) 101606626 101607550 2424300 2423373 NC_000014.9 velvet.61178 99.68 True fake: scaffold gap size wrong estimation (local) 101604017 101606371 2427517 2425163 NC_000014.9 velvet.61178 99.92 True fake: scaffold gap size wrong estimation (local) 101598021 101603928 2435197 2429292 NC_000014.9 velvet.61178 99.88 True relocation, scaffold gap is present, inconsistency = 11742 101616165 101617220 2435692 2436747 NC_000014.9 velvet.61178 99.91 True fake: scaffold gap size wrong estimation (local) 101617879 101622036 2438302 2442459 NC_000014.9 velvet.61178 99.95 True fake: scaffold gap size wrong estimation (local) 101622322 101627348 2443587 2448767 NC_000014.9 velvet.61178 99.56 True fake: scaffold gap size wrong estimation (local) 101627651 101632229 2449841 2454511 NC_000014.9 velvet.61178 99.91 True fake: scaffold gap size wrong estimation (local) 101632385 101637531 2455378 2460511 NC_000014.9 velvet.61178 99.41 True fake: scaffold gap size wrong estimation (local) 101637977 101642997 2461772 2466799 NC_000014.9 velvet.61178 99.92 True fake: scaffold gap size wrong estimation (local) 101643307 101644849 2467899 2469441 NC_000014.9 velvet.61178 99.94 True fake: scaffold gap size wrong estimation (local) 101644938 101647081 2470139 2472281 NC_000014.9 velvet.61178 99.91 True relocation, scaffold gap is present, inconsistency = 50400386 51242098 51244541 2474733 2472292 NC_000014.9 velvet.61178 99.8 True fake: scaffold gap size wrong estimation (local) 51205919 51213635 2510903 2503099 NC_000014.9 velvet.61178 99.94 True fake: scaffold gap size wrong estimation (local) 51200746 51201930 2512813 2511629 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 51170119 51173074 2540541 2537513 NC_000014.9 velvet.61178 99.97 True fake: scaffold gap size wrong estimation (local) 51166362 51169783 2545413 2541578 NC_000014.9 velvet.61178 99.91 True fake: scaffold gap size wrong estimation (local) 51160723 51165762 2551681 2546642 NC_000014.9 velvet.61178 99.96 True fake: scaffold gap size wrong estimation (local) 51159073 51159968 2554145 2553250 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 13198592 64360949 64362568 2556534 2558153 NC_000014.9 velvet.61178 99.94 True fake: scaffold gap size wrong estimation (local) 64367444 64368466 2564392 2565414 NC_000014.9 velvet.61178 99.9 True fake: scaffold gap size wrong estimation (local) 64370341 64370852 2568147 2568658 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64393420 64394554 2588463 2589597 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64394700 64396406 2590860 2592566 NC_000014.9 velvet.61178 99.82 True relocation, scaffold gap is present, inconsistency = -63587 64333829 64334726 2593576 2594473 NC_000014.9 velvet.61178 99.89 True fake: scaffold gap size wrong estimation (local) 64336140 64338232 2596606 2598698 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 49152 64387608 64389457 2598922 2600771 NC_000014.9 velvet.61178 99.57 True relocation, scaffold gap is present, inconsistency = -74537 64345410 64346988 2631261 2632839 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 64347256 64348112 2633549 2634405 NC_000014.9 velvet.61178 99.88 True fake: scaffold gap size wrong estimation (local) 64348978 64349570 2635734 2636326 NC_000014.9 velvet.61178 99.83 True relocation, scaffold gap is present, inconsistency = 43053858 21275234 21275935 2656212 2655511 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 21250254 21250973 2675562 2674843 NC_000014.9 velvet.61178 100.0 True fake: scaffold gap size wrong estimation (local) 21249587 21250171 2677159 2676575 NC_000014.9 velvet.61178 98.12 True local misassembly 21247942 21249285 2678503 2677160 NC_000014.9 velvet.61178 99.85 True fake: scaffold gap size wrong estimation (local) 21246559 21247665 2681048 2679942 NC_000014.9 velvet.61178 99.01 True relocation, scaffold gap is present, inconsistency = 43133996 64385243 64386891 2684630 2686278 NC_000014.9 velvet.61178 99.94 True relocation, scaffold gap is present, inconsistency = -51962 64334940 64335821 2686289 2687170 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = 5835582 58498430 58499347 2688098 2687181 NC_000014.9 velvet.61178 98.91 True fake: scaffold gap size wrong estimation (local) 58489357 58496957 2698230 2690630 NC_000014.9 velvet.61178 99.91 True fake: scaffold gap size wrong estimation (local) 58487609 58489208 2700706 2699003 NC_000014.9 velvet.61178 99.87 True fake: scaffold gap size wrong estimation (local) 58486408 58487328 2702375 2701455 NC_000014.9 velvet.61178 99.57 True relocation, scaffold gap is present, inconsistency = 37262698 21213279 21214569 2712806 2711516 NC_000014.9 velvet.61178 99.92 True local misassembly 21217156 21218420 2714081 2712817 NC_000014.9 velvet.61178 99.92 True fake: scaffold gap size wrong estimation (local) 21216448 21217185 2717614 2716877 NC_000014.9 velvet.61178 99.73 True relocation, scaffold gap is present, inconsistency = 37301501 58519123 58520535 2718051 2719463 NC_000014.9 velvet.61178 100.0 True relocation, scaffold gap is present, inconsistency = -13201 58508069 58509185 2720198 2721312 NC_000014.9 velvet.61178 99.73 True CONTIG velvet.61178 2721475 misassembled CONTIG velvet.61190 205 unaligned 49984346 49985227 1056 167 NC_000014.9 velvet.61200 100.0 True fake: scaffold gap size wrong estimation (local) 49954183 49955587 27077 25673 NC_000014.9 velvet.61200 100.0 True fake: scaffold gap size wrong estimation (local) 49950091 49953949 31858 28000 NC_000014.9 velvet.61200 100.0 True relocation, scaffold gap is present, inconsistency = 46952533 96908593 96909184 33969 34574 NC_000014.9 velvet.61200 96.86 True relocation, scaffold gap is present, inconsistency = 19737 96929059 96929914 35567 34712 NC_000014.9 velvet.61200 100.0 True fake: not a misassembly (possible transposable element) 96918508 96922179 35578 39249 NC_000014.9 velvet.61200 99.97 True fake: not a misassembly (possible transposable element) 96926605 96928987 41623 39271 NC_000014.9 velvet.61200 98.7 True fake: scaffold gap size wrong estimation (local) 96924750 96926105 44377 43021 NC_000014.9 velvet.61200 99.71 True fake: scaffold gap size wrong estimation (local) 96922170 96923650 47992 46512 NC_000014.9 velvet.61200 100.0 True relocation, scaffold gap is present, inconsistency = 21544001 75377036 75378051 48110 49125 NC_000014.9 velvet.61200 100.0 True relocation, scaffold gap is present, inconsistency = 25428443 49947571 49948582 50147 49136 NC_000014.9 velvet.61200 100.0 True relocation, scaffold gap is present, inconsistency = 25420262 75373038 75375023 54341 56326 NC_000014.9 velvet.61200 99.7 True relocation, scaffold gap is present, inconsistency = 21540152 96915346 96918268 59449 56497 NC_000014.9 velvet.61200 98.38 True fake: scaffold gap size wrong estimation (local) 96910840 96915122 64718 60436 NC_000014.9 velvet.61200 99.56 True local misassembly 96909256 96910839 68249 66666 NC_000014.9 velvet.61200 99.49 True relocation, scaffold gap is present, inconsistency = 32394766 64510012 64513683 69056 72727 NC_000014.9 velvet.61200 99.97 True fake: scaffold gap size wrong estimation (local) 64513955 64515534 73621 75200 NC_000014.9 velvet.61200 100.0 True fake: scaffold gap size wrong estimation (local) 64515815 64517396 76223 77748 NC_000014.9 velvet.61200 96.37 True relocation, scaffold gap is present, inconsistency = 14576611 49924791 49925323 92161 91629 NC_000014.9 velvet.61200 100.0 True fake: scaffold gap size wrong estimation (local) 49922740 49924677 94873 93009 NC_000014.9 velvet.61200 96.16 True fake: scaffold gap size wrong estimation (local) 49920888 49922141 97531 96278 NC_000014.9 velvet.61200 99.2 True local misassembly 49919771 49920615 98376 97532 NC_000014.9 velvet.61200 100.0 True relocation, scaffold gap is present, inconsistency = -46969417 96885961 96889177 101603 98387 NC_000014.9 velvet.61200 99.84 True relocation, scaffold gap is present, inconsistency = -14574 96870199 96871810 131939 130328 NC_000014.9 velvet.61200 100.0 True fake: scaffold gap size wrong estimation (local) 96844791 96851184 154474 147333 NC_000014.9 velvet.61200 99.97 True fake: scaffold gap size wrong estimation (local) 96841838 96844576 157884 155146 NC_000014.9 velvet.61200 100.0 True fake: scaffold gap size wrong estimation (local) 96840998 96841615 159266 158649 NC_000014.9 velvet.61200 100.0 True fake: scaffold gap size wrong estimation (local) 96836790 96840842 164257 159728 NC_000014.9 velvet.61200 98.84 True fake: scaffold gap size wrong estimation (local) 96824927 96836510 177549 165162 NC_000014.9 velvet.61200 99.95 True fake: scaffold gap size wrong estimation (local) 96822082 96824651 180998 178429 NC_000014.9 velvet.61200 99.96 True fake: scaffold gap size wrong estimation (local) 96820601 96821953 183138 181786 NC_000014.9 velvet.61200 99.93 True fake: scaffold gap size wrong estimation (local) 96811205 96820039 193655 184302 NC_000014.9 velvet.61200 99.93 True fake: scaffold gap size wrong estimation (local) 96803413 96810946 202742 194173 NC_000014.9 velvet.61200 98.54 True fake: scaffold gap size wrong estimation (local) 96796811 96803185 210172 203743 NC_000014.9 velvet.61200 99.98 True fake: scaffold gap size wrong estimation (local) 96785675 96796014 223580 211634 NC_000014.9 velvet.61200 99.37 True relocation, scaffold gap is present, inconsistency = 47416051 49367758 49369613 225447 223591 NC_000014.9 velvet.61200 99.89 True relocation, scaffold gap is present, inconsistency = -7744 49373612 49375491 227337 225458 NC_000014.9 velvet.61200 99.95 True fake: scaffold gap size wrong estimation (local) 49366948 49367534 228010 227424 NC_000014.9 velvet.61200 100.0 True relocation, scaffold gap is present, inconsistency = -12128 49376345 49379065 230741 228021 NC_000014.9 velvet.61200 99.96 True local misassembly 49379172 49380143 231723 230752 NC_000014.9 velvet.61200 99.9 True relocation, scaffold gap is present, inconsistency = 21111 49334969 49336429 254815 253355 NC_000014.9 velvet.61200 100.0 True fake: scaffold gap size wrong estimation (local) 49332173 49334694 258330 255822 NC_000014.9 velvet.61200 99.44 True local misassembly 49336450 49337707 259598 258341 NC_000014.9 velvet.61200 100.0 True fake: scaffold gap size wrong estimation (local) 49327006 49332107 264709 259609 NC_000014.9 velvet.61200 99.84 True relocation, scaffold gap is present, inconsistency = -47321799 96644770 96648794 268802 264720 NC_000014.9 velvet.61200 99.8 True relocation, scaffold gap is present, inconsistency = -16186 96658352 96659289 271406 270469 NC_000014.9 velvet.61200 100.0 True fake: scaffold gap size wrong estimation (local) 96655372 96658122 275292 272542 NC_000014.9 velvet.61200 99.85 True relocation, scaffold gap is present, inconsistency = 115814 96783056 96784626 284412 285982 NC_000014.9 velvet.61200 100.0 True relocation, scaffold gap is present, inconsistency = 3730734 100517813 100518615 289237 288435 NC_000014.9 velvet.61200 100.0 True relocation, scaffold gap is present, inconsistency = 15857058 84655695 84660437 294297 289555 NC_000014.9 velvet.61200 99.85 True relocation, scaffold gap is present, inconsistency = 11339068 95999516 96001287 294308 296061 NC_000014.9 velvet.61200 98.87 True relocation, scaffold gap is present, inconsistency = 66038 96067700 96069167 297903 296436 NC_000014.9 velvet.61200 99.8 True relocation, scaffold gap is present, inconsistency = -575744 96642595 96643433 298752 297914 NC_000014.9 velvet.61200 98.57 True local misassembly 96641223 96642317 299847 298753 NC_000014.9 velvet.61200 100.0 True fake: scaffold gap size wrong estimation (local) 96639511 96641005 302289 300795 NC_000014.9 velvet.61200 99.73 True fake: not a misassembly (possible transposable element) 96635795 96638864 302300 305369 NC_000014.9 velvet.61200 99.71 True fake: not a misassembly (possible transposable element) 96633753 96635485 307112 305380 NC_000014.9 velvet.61200 99.94 True fake: scaffold gap size wrong estimation (local) 96630967 96633323 310624 308272 NC_000014.9 velvet.61200 99.7 True fake: scaffold gap size wrong estimation (local) 96621271 96626256 316052 311067 NC_000014.9 velvet.61200 99.96 True relocation, scaffold gap is present, inconsistency = 22589 96648856 96653270 316063 321252 NC_000014.9 velvet.61200 99.84 True relocation, scaffold gap is present, inconsistency = -59876001 36777280 36779067 321263 323050 NC_000014.9 velvet.61200 99.94 True fake: scaffold gap size wrong estimation (local) 36779725 36782705 324534 327492 NC_000014.9 velvet.61200 99.12 True fake: scaffold gap size wrong estimation (local) 36783044 36789706 328643 335305 NC_000014.9 velvet.61200 99.97 True fake: scaffold gap size wrong estimation (local) 36789916 36794544 336292 341025 NC_000014.9 velvet.61200 99.98 True relocation, scaffold gap is present, inconsistency = 59858804 96653861 96654533 341538 342210 NC_000014.9 velvet.61200 99.85 True fake: scaffold gap size wrong estimation (local) 96659604 96672356 342221 354973 NC_000014.9 velvet.61200 99.87 True relocation, scaffold gap is present, inconsistency = 83436 96755803 96756410 355591 354984 NC_000014.9 velvet.61200 99.84 True fake: scaffold gap size wrong estimation (local) 96749420 96750494 356676 355602 NC_000014.9 velvet.61200 99.91 True fake: scaffold gap size wrong estimation (local) 96746587 96749199 360275 357663 NC_000014.9 velvet.61200 99.58 True fake: scaffold gap size wrong estimation (local) 96745791 96746409 361984 361366 NC_000014.9 velvet.61200 99.35 True relocation, scaffold gap is present, inconsistency = 47366501 49371280 49373400 367874 369994 NC_000014.9 velvet.61200 99.91 True relocation, scaffold gap is present, inconsistency = 47332938 96709489 96710397 373145 374053 NC_000014.9 velvet.61200 99.89 True relocation, scaffold gap is present, inconsistency = 33228 96743636 96744783 375209 374064 NC_000014.9 velvet.61200 99.48 True relocation, scaffold gap is present, inconsistency = 25611892 71106292 71114921 400661 392032 NC_000014.9 velvet.61200 99.93 True fake: scaffold gap size wrong estimation (local) 71100339 71102276 402609 400672 NC_000014.9 velvet.61200 99.95 True fake: scaffold gap size wrong estimation (local) 71099433 71100055 404131 403509 NC_000014.9 velvet.61200 99.84 True fake: scaffold gap size wrong estimation (local) 71098554 71099090 405868 405332 NC_000014.9 velvet.61200 100.0 True fake: scaffold gap size wrong estimation (local) 71096291 71097145 407835 406981 NC_000014.9 velvet.61200 99.88 True local misassembly 71097154 71098449 409141 407846 NC_000014.9 velvet.61200 99.77 True fake: not a misassembly (possible transposable element) 55565503 55566628 409152 410277 NC_000014.9 velvet.61200 100.0 True fake: not a misassembly (possible transposable element) 71095104 71095907 412141 411338 NC_000014.9 velvet.61200 98.76 True local misassembly 71093940 71094802 413004 412142 NC_000014.9 velvet.61200 99.88 True relocation, scaffold gap is present, inconsistency = 15522037 55571315 55571892 413015 413592 NC_000014.9 velvet.61200 100.0 True local misassembly 55568421 55571034 413790 416403 NC_000014.9 velvet.61200 100.0 True relocation, scaffold gap is present, inconsistency = 15522262 71093307 71093937 417044 416414 NC_000014.9 velvet.61200 97.78 True local misassembly 71092435 71093306 418257 417386 NC_000014.9 velvet.61200 99.89 True relocation, scaffold gap is present, inconsistency = 15518822 55572085 55573509 418361 419785 NC_000014.9 velvet.61200 100.0 True relocation, scaffold gap is present, inconsistency = 2208410 57781930 57784024 421890 419796 NC_000014.9 velvet.61200 100.0 True relocation, scaffold gap is present, inconsistency = 8375331 49399496 49406588 428993 421901 NC_000014.9 velvet.61200 99.9 True relocation, scaffold gap is present, inconsistency = -47314793 96710387 96712608 432894 430674 NC_000014.9 velvet.61200 99.86 True fake: scaffold gap size wrong estimation (local) 96706700 96708826 440463 438352 NC_000014.9 velvet.61200 99.24 True fake: scaffold gap size wrong estimation (local) 96703613 96706430 444336 441519 NC_000014.9 velvet.61200 99.89 True relocation, scaffold gap is present, inconsistency = 25640978 71061020 71062624 445951 444347 NC_000014.9 velvet.61200 100.0 True relocation, scaffold gap is present, inconsistency = 15457683 55602618 55603176 446112 446670 NC_000014.9 velvet.61200 100.0 True relocation, scaffold gap is present, inconsistency = 44450962 100054311 100054919 447451 446843 NC_000014.9 velvet.61200 100.0 True fake: not a misassembly (possible transposable element) 38481368 38483643 447710 449985 NC_000014.9 velvet.61200 99.78 True fake: not a misassembly (possible transposable element) 100052940 100053755 450813 449996 NC_000014.9 velvet.61200 99.63 True relocation, scaffold gap is present, inconsistency = 61555581 38489360 38492311 458812 455861 NC_000014.9 velvet.61200 99.97 True fake: scaffold gap size wrong estimation (local) 38488128 38489359 461328 460097 NC_000014.9 velvet.61200 99.84 True fake: scaffold gap size wrong estimation (local) 38483619 38484207 461927 461339 NC_000014.9 velvet.61200 99.83 True relocation, scaffold gap is present, inconsistency = 4694055 33785436 33789553 466053 461938 NC_000014.9 velvet.61200 99.9 True fake: scaffold gap size wrong estimation (local) 33771812 33784706 480845 467604 NC_000014.9 velvet.61200 99.97 True fake: scaffold gap size wrong estimation (local) 33770895 33771534 482358 481719 NC_000014.9 velvet.61200 100.0 True fake: scaffold gap size wrong estimation (local) 33765300 33770639 488521 482659 NC_000014.9 velvet.61200 99.62 True relocation, scaffold gap is present, inconsistency = 37345036 71115686 71116401 488532 489243 NC_000014.9 velvet.61200 99.44 True relocation, scaffold gap is present, inconsistency = -27689697 43426715 43427603 489254 490142 NC_000014.9 velvet.61200 100.0 True fake: scaffold gap size wrong estimation (local) 43432991 43438901 490153 496106 NC_000014.9 velvet.61200 99.81 True relocation, scaffold gap is present, inconsistency = 14382382 57821294 57825633 496117 500456 NC_000014.9 velvet.61200 100.0 True local misassembly 57819843 57821155 500467 501779 NC_000014.9 velvet.61200 100.0 True relocation, scaffold gap is present, inconsistency = 38851305 96673100 96680223 510324 502419 NC_000014.9 velvet.61200 95.45 True relocation, scaffold gap is present, inconsistency = 74453854 22217266 22218075 511495 512304 NC_000014.9 velvet.61200 100.0 True relocation, scaffold gap is present, inconsistency = 11613986 33832428 33832988 512671 513231 NC_000014.9 velvet.61200 100.0 True relocation, scaffold gap is present, inconsistency = 62918584 96751687 96753462 513346 515120 NC_000014.9 velvet.61200 99.61 True relocation, scaffold gap is present, inconsistency = 29328853 67419809 67422823 518145 515131 NC_000014.9 velvet.61200 99.97 True relocation, scaffold gap is present, inconsistency = 33584575 33833047 33835223 518156 520333 NC_000014.9 velvet.61200 99.54 True fake: scaffold gap size wrong estimation (local) 33835465 33838850 521446 524831 NC_000014.9 velvet.61200 99.94 True relocation, scaffold gap is present, inconsistency = 63418136 97257275 97259559 527404 525120 NC_000014.9 velvet.61200 100.0 True fake: scaffold gap size wrong estimation (local) 97255500 97257184 529893 528168 NC_000014.9 velvet.61200 97.39 True relocation, scaffold gap is present, inconsistency = 11656554 85597735 85598935 529904 531104 NC_000014.9 velvet.61200 99.92 True fake: scaffold gap size wrong estimation (local) 85599252 85603621 531984 536353 NC_000014.9 velvet.61200 99.91 True relocation, scaffold gap is present, inconsistency = 16911803 102516379 102518911 539840 537308 NC_000014.9 velvet.61200 99.96 True fake: not a misassembly (possible transposable element) 89225632 89226188 541753 542309 NC_000014.9 velvet.61200 100.0 True fake: not a misassembly (possible transposable element) 102513867 102515443 543896 542320 NC_000014.9 velvet.61200 99.87 True relocation, scaffold gap is present, inconsistency = 10901 102495371 102502955 551511 543907 NC_000014.9 velvet.61200 99.53 True fake: scaffold gap size wrong estimation (local) 102474604 102475945 570304 568963 NC_000014.9 velvet.61200 100.0 True fake: scaffold gap size wrong estimation (local) 102471677 102473973 574039 571743 NC_000014.9 velvet.61200 100.0 True relocation, scaffold gap is present, inconsistency = -8527 102479019 102480193 575224 574050 NC_000014.9 velvet.61200 100.0 True relocation, scaffold gap is present, inconsistency = -10133 102484921 102487527 579455 576849 NC_000014.9 velvet.61200 99.88 True fake: scaffold gap size wrong estimation (local) 102484084 102484673 580991 580402 NC_000014.9 velvet.61200 99.83 True fake: not a misassembly (possible transposable element) 37149648 37151804 581018 583174 NC_000014.9 velvet.61200 99.95 True fake: not a misassembly (possible transposable element) 102481399 102482056 584291 583634 NC_000014.9 velvet.61200 100.0 True relocation, scaffold gap is present, inconsistency = -19287 102468460 102470292 616517 614685 NC_000014.9 velvet.61200 99.95 True fake: scaffold gap size wrong estimation (local) 102464565 102467321 621178 618422 NC_000014.9 velvet.61200 99.96 True fake: scaffold gap size wrong estimation (local) 102463905 102464418 622355 621842 NC_000014.9 velvet.61200 100.0 True fake: scaffold gap size wrong estimation (local) 102460971 102463135 625805 623641 NC_000014.9 velvet.61200 100.0 True fake: scaffold gap size wrong estimation (local) 102458963 102459495 628577 628045 NC_000014.9 velvet.61200 100.0 True fake: scaffold gap size wrong estimation (local) 102454160 102455470 636060 634750 NC_000014.9 velvet.61200 99.92 True fake: scaffold gap size wrong estimation (local) 102439123 102440968 652813 650968 NC_000014.9 velvet.61200 99.95 True fake: scaffold gap size wrong estimation (local) 102436586 102437264 656091 655413 NC_000014.9 velvet.61200 100.0 True fake: scaffold gap size wrong estimation (local) 102433765 102436300 659876 657341 NC_000014.9 velvet.61200 99.8 True fake: scaffold gap size wrong estimation (extensive) 102424588 102425556 660855 659887 NC_000014.9 velvet.61200 100.0 True local misassembly 102429113 102429952 661705 660866 NC_000014.9 velvet.61200 100.0 True fake: scaffold gap size wrong estimation (local) 102423554 102424353 662515 661716 NC_000014.9 velvet.61200 100.0 True relocation, scaffold gap is present, inconsistency = -8749 102431622 102432292 663196 662526 NC_000014.9 velvet.61200 100.0 True fake: scaffold gap size wrong estimation (local) 102430247 102431012 664100 663335 NC_000014.9 velvet.61200 99.74 True fake: scaffold gap size wrong estimation (local) 102426826 102428475 666041 664347 NC_000014.9 velvet.61200 99.64 True fake: scaffold gap size wrong estimation (local) 102416884 102423106 674127 668049 NC_000014.9 velvet.61200 96.78 True fake: scaffold gap size wrong estimation (local) 102413585 102416135 678343 675793 NC_000014.9 velvet.61200 99.88 True fake: scaffold gap size wrong estimation (local) 102412194 102412820 680771 680153 NC_000014.9 velvet.61200 98.7 True fake: scaffold gap size wrong estimation (local) 102408171 102409490 686992 685676 NC_000014.9 velvet.61200 99.77 True fake: scaffold gap size wrong estimation (local) 102405284 102406266 690711 689729 NC_000014.9 velvet.61200 99.9 True fake: scaffold gap size wrong estimation (local) 102401805 102403909 694990 692886 NC_000014.9 velvet.61200 99.95 True relocation, scaffold gap is present, inconsistency = -53320 102448826 102453201 701289 696914 NC_000014.9 velvet.61200 99.91 True fake: scaffold gap size wrong estimation (local) 102446428 102447540 707848 706736 NC_000014.9 velvet.61200 99.82 True fake: scaffold gap size wrong estimation (local) 102445477 102446148 708690 708019 NC_000014.9 velvet.61200 99.7 True relocation, scaffold gap is present, inconsistency = 84098780 18315373 18315968 739419 740014 NC_000014.9 velvet.61200 100.0 True relocation, scaffold gap is present, inconsistency = 84121538 102437517 102438872 740025 741367 NC_000014.9 velvet.61200 98.82 True CONTIG velvet.61200 741932 misassembled CONTIG velvet.61211 444 unaligned 24393531 24400800 17204 24562 NC_000014.9 velvet.61212 99.89 True fake: scaffold gap size wrong estimation (local) 24401084 24405909 25609 30511 NC_000014.9 velvet.61212 99.81 True relocation, scaffold gap is present, inconsistency = 13250 24419963 24421672 31315 33024 NC_000014.9 velvet.61212 99.94 True fake: scaffold gap size wrong estimation (local) 24421961 24425017 33919 36975 NC_000014.9 velvet.61212 99.93 True fake: scaffold gap size wrong estimation (local) 24425171 24434463 37928 47391 NC_000014.9 velvet.61212 99.86 True fake: scaffold gap size wrong estimation (local) 24434703 24443916 48455 57730 NC_000014.9 velvet.61212 99.66 True fake: scaffold gap size wrong estimation (local) 24445182 24447608 59771 62163 NC_000014.9 velvet.61212 97.06 True relocation, scaffold gap is present, inconsistency = 11343596 35799594 35800753 70553 71712 NC_000014.9 velvet.61212 100.0 True fake: scaffold gap size wrong estimation (local) 35802984 35803649 74739 75404 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = -11338149 24471239 24473064 81143 82968 NC_000014.9 velvet.61212 98.85 True fake: scaffold gap size wrong estimation (local) 24474513 24477511 85354 88859 NC_000014.9 velvet.61212 99.14 True fake: scaffold gap size wrong estimation (local) 24477704 24479196 89502 90994 NC_000014.9 velvet.61212 99.33 True relocation, scaffold gap is present, inconsistency = 49544903 74024729 74025852 92747 91624 NC_000014.9 velvet.61212 100.0 True fake: scaffold gap size wrong estimation (local) 74023935 74024584 94939 94290 NC_000014.9 velvet.61212 98.15 True local misassembly 74022427 74023621 96134 94940 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = 49539431 24481192 24482769 96361 97938 NC_000014.9 velvet.61212 99.11 True fake: scaffold gap size wrong estimation (local) 24482972 24485189 98525 100742 NC_000014.9 velvet.61212 99.32 True relocation, scaffold gap is present, inconsistency = 49532875 74018075 74020548 103226 100753 NC_000014.9 velvet.61212 100.0 True local misassembly 74016483 74017198 104343 103628 NC_000014.9 velvet.61212 99.86 True fake: scaffold gap size wrong estimation (local) 74015507 74016367 106319 105459 NC_000014.9 velvet.61212 100.0 True fake: scaffold gap size wrong estimation (local) 74013456 74014498 108755 107713 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = 49481048 24503877 24516289 124874 138648 NC_000014.9 velvet.61212 99.72 True relocation, scaffold gap is present, inconsistency = -21154 24517610 24518673 161123 162186 NC_000014.9 velvet.61212 98.59 True indel: indel (<= 5bp) 24518675 24519354 162187 162866 NC_000014.9 velvet.61212 99.41 True fake: scaffold gap size wrong estimation (local) 24521245 24522183 165431 166369 NC_000014.9 velvet.61212 99.79 True fake: scaffold gap size wrong estimation (local) 24522313 24523985 166608 168280 NC_000014.9 velvet.61212 99.76 True local misassembly 24524056 24526037 168533 170514 NC_000014.9 velvet.61212 99.8 True fake: scaffold gap size wrong estimation (local) 24556801 24558978 197924 200101 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = 69152765 93711754 93723999 212412 200112 NC_000014.9 velvet.61212 95.97 True fake: scaffold gap size wrong estimation (local) 93705349 93711476 219620 213492 NC_000014.9 velvet.61212 99.95 True fake: not a misassembly (possible transposable element) 93601188 93601820 219631 220264 NC_000014.9 velvet.61212 98.9 True fake: not a misassembly (possible transposable element) 93700074 93705117 227239 222196 NC_000014.9 velvet.61212 99.9 True relocation, scaffold gap is present, inconsistency = 86441 93611876 93613432 227440 228998 NC_000014.9 velvet.61212 99.87 True fake: scaffold gap size wrong estimation (local) 93614667 93615470 231158 231961 NC_000014.9 velvet.61212 99.88 True relocation, scaffold gap is present, inconsistency = 73153 93689763 93695607 238923 233101 NC_000014.9 velvet.61212 99.48 True fake: scaffold gap size wrong estimation (local) 93683828 93689476 245626 239978 NC_000014.9 velvet.61212 99.63 True fake: scaffold gap size wrong estimation (local) 93680789 93683827 252703 249665 NC_000014.9 velvet.61212 99.93 True fake: scaffold gap size wrong estimation (local) 93679439 93680612 254797 253624 NC_000014.9 velvet.61212 99.83 True fake: scaffold gap size wrong estimation (local) 93677921 93679193 256418 255146 NC_000014.9 velvet.61212 99.84 True fake: scaffold gap size wrong estimation (local) 93671972 93676257 263372 259123 NC_000014.9 velvet.61212 99.11 True fake: scaffold gap size wrong estimation (local) 93668981 93671487 267284 264778 NC_000014.9 velvet.61212 99.96 True fake: scaffold gap size wrong estimation (local) 93667112 93668428 269944 268628 NC_000014.9 velvet.61212 99.7 True indel: indel (> 5bp) 93666055 93667111 271007 269951 NC_000014.9 velvet.61212 98.96 True indel: indel (<= 5bp) 93665214 93666053 271847 271008 NC_000014.9 velvet.61212 98.57 True fake: scaffold gap size wrong estimation (local) 93662874 93665213 275967 273628 NC_000014.9 velvet.61212 99.15 True indel: indel (<= 5bp) 93660844 93662871 277995 275968 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = 69108984 24549386 24551716 278139 280432 NC_000014.9 velvet.61212 98.41 True fake: scaffold gap size wrong estimation (local) 24552403 24554619 281976 284207 NC_000014.9 velvet.61212 99.91 True fake: scaffold gap size wrong estimation (local) 24554901 24556798 285412 287278 NC_000014.9 velvet.61212 98.36 True fake: scaffold gap size wrong estimation (local) 24559247 24560838 290330 291921 NC_000014.9 velvet.61212 100.0 True fake: scaffold gap size wrong estimation (local) 24561155 24562412 292601 293858 NC_000014.9 velvet.61212 99.84 True relocation, scaffold gap is present, inconsistency = 69074203 93637730 93641525 298768 294973 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = -10083 93642425 93647802 304156 298779 NC_000014.9 velvet.61212 99.91 True fake: scaffold gap size wrong estimation (local) 93632689 93637581 309062 304170 NC_000014.9 velvet.61212 99.88 True relocation, scaffold gap is present, inconsistency = 36741 93695923 93697181 330663 331921 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = 63498 93629155 93632414 335191 331932 NC_000014.9 velvet.61212 99.88 True fake: scaffold gap size wrong estimation (local) 93623883 93628915 341266 336207 NC_000014.9 velvet.61212 99.33 True fake: not a misassembly (possible transposable element) 93698768 93700087 341277 342596 NC_000014.9 velvet.61212 99.92 True fake: not a misassembly (possible transposable element) 93616495 93617781 343893 342607 NC_000014.9 velvet.61212 100.0 True fake: scaffold gap size wrong estimation (local) 93615729 93616323 344660 344067 NC_000014.9 velvet.61212 99.66 True relocation, scaffold gap is present, inconsistency = 363691 93249267 93252027 347431 344671 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = -374366 93617783 93623622 353326 347442 NC_000014.9 velvet.61212 99.97 True relocation, scaffold gap is present, inconsistency = 32458 93657642 93660521 354888 357767 NC_000014.9 velvet.61212 99.9 True inversion, scaffold gap is present 93652029 93655629 361941 357778 NC_000014.9 velvet.61212 96.68 True fake: scaffold gap size wrong estimation (local) 93647835 93651748 366678 362789 NC_000014.9 velvet.61212 99.26 True fake: not a misassembly (possible transposable element) 93697426 93698500 394810 395884 NC_000014.9 velvet.61212 100.0 True fake: not a misassembly (possible transposable element) 93610870 93611824 396850 395895 NC_000014.9 velvet.61212 99.79 True indel: indel (> 5bp) 93602915 93610736 405527 397009 NC_000014.9 velvet.61212 99.91 True fake: scaffold gap size wrong estimation (extensive) 93594538 93595081 406683 406140 NC_000014.9 velvet.61212 100.0 True fake: scaffold gap size wrong estimation (local) 93592447 93594276 409167 407329 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = -8704 93600217 93601140 410101 409178 NC_000014.9 velvet.61212 100.0 True fake: scaffold gap size wrong estimation (local) 93599364 93599923 410839 410280 NC_000014.9 velvet.61212 100.0 True local misassembly 93598781 93599355 411533 410959 NC_000014.9 velvet.61212 100.0 True fake: scaffold gap size wrong estimation (local) 93596623 93598511 414692 412766 NC_000014.9 velvet.61212 99.89 True fake: scaffold gap size wrong estimation (local) 93595362 93596349 416190 415203 NC_000014.9 velvet.61212 100.0 True fake: scaffold gap size wrong estimation (local) 93588748 93589861 417314 416201 NC_000014.9 velvet.61212 100.0 True fake: scaffold gap size wrong estimation (local) 93586155 93588458 420824 418521 NC_000014.9 velvet.61212 99.96 True fake: scaffold gap size wrong estimation (local) 93584970 93585869 422766 421867 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = 138272 93724152 93726556 422777 425181 NC_000014.9 velvet.61212 99.92 True fake: not a misassembly (possible transposable element) 93589866 93592162 427488 425192 NC_000014.9 velvet.61212 99.96 True fake: not a misassembly (possible transposable element) 93726651 93735707 427499 436555 NC_000014.9 velvet.61212 99.86 True fake: scaffold gap size wrong estimation (local) 93735991 93739076 437687 440631 NC_000014.9 velvet.61212 95.3 True fake: scaffold gap size wrong estimation (local) 93740093 93749786 442656 452302 NC_000014.9 velvet.61212 99.26 True fake: scaffold gap size wrong estimation (local) 93750133 93758333 453371 461628 NC_000014.9 velvet.61212 99.15 True fake: scaffold gap size wrong estimation (local) 93758637 93761113 462726 465202 NC_000014.9 velvet.61212 99.88 True relocation, scaffold gap is present, inconsistency = 215686 93542007 93542940 466146 465213 NC_000014.9 velvet.61212 99.89 True fake: scaffold gap size wrong estimation (local) 93539503 93541723 469292 467072 NC_000014.9 velvet.61212 99.73 True fake: scaffold gap size wrong estimation (local) 93530889 93538901 479362 470727 NC_000014.9 velvet.61212 99.56 True fake: scaffold gap size wrong estimation (local) 93498579 93501034 506958 504503 NC_000014.9 velvet.61212 99.96 True relocation, scaffold gap is present, inconsistency = 10089 93487562 93488479 507886 506969 NC_000014.9 velvet.61212 99.78 True local misassembly 93488500 93492385 511838 507897 NC_000014.9 velvet.61212 99.82 True relocation, scaffold gap is present, inconsistency = -9222 93495298 93497709 514292 511851 NC_000014.9 velvet.61212 98.65 True fake: scaffold gap size wrong estimation (extensive) 93484185 93486430 517583 515389 NC_000014.9 velvet.61212 97.63 True fake: scaffold gap size wrong estimation (local) 93479569 93483503 522961 519054 NC_000014.9 velvet.61212 99.24 True fake: scaffold gap size wrong estimation (local) 93464122 93479170 540035 524184 NC_000014.9 velvet.61212 99.91 True fake: scaffold gap size wrong estimation (local) 93455926 93459041 543863 540748 NC_000014.9 velvet.61212 99.81 True fake: scaffold gap size wrong estimation (local) 93454308 93455907 547619 546009 NC_000014.9 velvet.61212 99.32 True relocation, scaffold gap is present, inconsistency = -9581 93462143 93463878 549356 547630 NC_000014.9 velvet.61212 99.4 True fake: scaffold gap size wrong estimation (local) 93460509 93461943 551605 550171 NC_000014.9 velvet.61212 99.79 True fake: scaffold gap size wrong estimation (local) 93452566 93454047 553101 551620 NC_000014.9 velvet.61212 99.87 True fake: scaffold gap size wrong estimation (local) 93446666 93452375 560053 554122 NC_000014.9 velvet.61212 99.89 True fake: scaffold gap size wrong estimation (local) 93443692 93446377 563816 561131 NC_000014.9 velvet.61212 99.93 True fake: scaffold gap size wrong estimation (local) 93434220 93442821 574395 565445 NC_000014.9 velvet.61212 99.84 True fake: scaffold gap size wrong estimation (local) 93425137 93433929 584301 575508 NC_000014.9 velvet.61212 99.8 True indel: indel (> 5bp) 93423753 93425076 585731 584404 NC_000014.9 velvet.61212 99.77 True fake: scaffold gap size wrong estimation (local) 93423074 93423609 586969 586434 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = 57156 93364596 93365134 587753 588291 NC_000014.9 velvet.61212 99.81 True fake: scaffold gap size wrong estimation (local) 93387623 93389682 608215 610274 NC_000014.9 velvet.61212 99.9 True fake: scaffold gap size wrong estimation (local) 93389938 93394379 611389 615830 NC_000014.9 velvet.61212 99.91 True fake: scaffold gap size wrong estimation (local) 93394780 93395391 617020 617631 NC_000014.9 velvet.61212 99.67 True inversion, scaffold gap is present 93395370 93398910 621167 617642 NC_000014.9 velvet.61212 97.06 True fake: scaffold gap size wrong estimation (local) 93363990 93364556 649010 648444 NC_000014.9 velvet.61212 99.82 True fake: scaffold gap size wrong estimation (local) 93362600 93363721 651829 650709 NC_000014.9 velvet.61212 99.82 True fake: scaffold gap size wrong estimation (local) 93359927 93360940 655248 654181 NC_000014.9 velvet.61212 99.57 True fake: scaffold gap size wrong estimation (local) 93358583 93359133 656010 655460 NC_000014.9 velvet.61212 97.64 True fake: scaffold gap size wrong estimation (local) 93356279 93357577 660167 658869 NC_000014.9 velvet.61212 99.92 True relocation, scaffold gap is present, inconsistency = 43391213 49960844 49963087 664389 662146 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = -43399225 93344995 93354500 679548 669958 NC_000014.9 velvet.61212 98.9 True relocation, scaffold gap is present, inconsistency = 20509680 72834490 72835069 680368 679794 NC_000014.9 velvet.61212 98.97 True relocation, scaffold gap is present, inconsistency = 22857180 49969880 49973383 687798 684295 NC_000014.9 velvet.61212 100.0 True fake: scaffold gap size wrong estimation (local) 49968305 49969376 690289 689171 NC_000014.9 velvet.61212 100.0 True fake: scaffold gap size wrong estimation (local) 49967259 49967927 691498 690830 NC_000014.9 velvet.61212 99.85 True fake: scaffold gap size wrong estimation (local) 49965669 49966991 693496 692174 NC_000014.9 velvet.61212 100.0 True fake: scaffold gap size wrong estimation (local) 49963747 49965452 695958 694253 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = 43347612 93313986 93315965 696880 698859 NC_000014.9 velvet.61212 100.0 True fake: scaffold gap size wrong estimation (local) 93316286 93317183 699638 700535 NC_000014.9 velvet.61212 100.0 True fake: scaffold gap size wrong estimation (local) 93317306 93321347 701258 705299 NC_000014.9 velvet.61212 99.98 True fake: scaffold gap size wrong estimation (local) 93321591 93324393 706336 709134 NC_000014.9 velvet.61212 99.79 True relocation, scaffold gap is present, inconsistency = 246996 93584028 93584695 722440 721773 NC_000014.9 velvet.61212 98.5 True fake: scaffold gap size wrong estimation (local) 93581762 93583042 724446 723166 NC_000014.9 velvet.61212 100.0 True fake: scaffold gap size wrong estimation (local) 93577096 93580784 730007 726319 NC_000014.9 velvet.61212 99.97 True fake: scaffold gap size wrong estimation (local) 93573999 93576888 733920 731032 NC_000014.9 velvet.61212 99.97 True fake: scaffold gap size wrong estimation (local) 93569280 93573733 739467 735014 NC_000014.9 velvet.61212 99.84 True fake: scaffold gap size wrong estimation (local) 93564831 93566626 747149 745372 NC_000014.9 velvet.61212 98.6 True fake: scaffold gap size wrong estimation (extensive) 93563709 93564508 756041 755242 NC_000014.9 velvet.61212 97.76 True relocation, scaffold gap is present, inconsistency = 212868 93777634 93781736 756299 760401 NC_000014.9 velvet.61212 99.98 True fake: scaffold gap size wrong estimation (local) 93785223 93785919 762126 762822 NC_000014.9 velvet.61212 100.0 True local misassembly 93782616 93783888 765603 766875 NC_000014.9 velvet.61212 100.0 True fake: scaffold gap size wrong estimation (extensive) 93793326 93795147 766886 768707 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = -11227 93783931 93785203 768718 769990 NC_000014.9 velvet.61212 99.92 True local misassembly 93785924 93791741 769991 775808 NC_000014.9 velvet.61212 99.83 True indel: indel (> 5bp) 93791790 93793128 775809 777147 NC_000014.9 velvet.61212 99.18 True relocation, scaffold gap is present, inconsistency = 261627 93525430 93530152 782012 777158 NC_000014.9 velvet.61212 99.96 True fake: scaffold gap size wrong estimation (local) 93517473 93525172 790784 783079 NC_000014.9 velvet.61212 99.93 True fake: scaffold gap size wrong estimation (local) 93516713 93517309 791529 790933 NC_000014.9 velvet.61212 100.0 True fake: scaffold gap size wrong estimation (local) 93511712 93516466 798108 792207 NC_000014.9 velvet.61212 98.42 True fake: scaffold gap size wrong estimation (local) 93509186 93510634 801093 799699 NC_000014.9 velvet.61212 95.72 True fake: scaffold gap size wrong estimation (local) 93506407 93508975 804732 802165 NC_000014.9 velvet.61212 99.84 True relocation, scaffold gap is present, inconsistency = 286482 93795468 93804309 804743 813584 NC_000014.9 velvet.61212 99.91 True fake: scaffold gap size wrong estimation (local) 93804588 93809914 814628 820041 NC_000014.9 velvet.61212 99.96 True fake: scaffold gap size wrong estimation (local) 93810107 93814524 820814 825231 NC_000014.9 velvet.61212 99.5 True fake: scaffold gap size wrong estimation (local) 93814525 93819807 826620 831902 NC_000014.9 velvet.61212 99.77 True fake: scaffold gap size wrong estimation (local) 93820631 93821964 832676 834008 NC_000014.9 velvet.61212 99.4 True fake: scaffold gap size wrong estimation (local) 93822050 93822898 834110 834958 NC_000014.9 velvet.61212 100.0 True fake: scaffold gap size wrong estimation (local) 93823208 93826591 836038 839419 NC_000014.9 velvet.61212 99.88 True fake: scaffold gap size wrong estimation (local) 93826863 93827975 840345 841457 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = 41130384 52693352 52696468 844638 841468 NC_000014.9 velvet.61212 99.93 True fake: scaffold gap size wrong estimation (local) 52676865 52677590 859427 858702 NC_000014.9 velvet.61212 98.62 True indel: indel (> 5bp) 52676215 52676812 860025 859428 NC_000014.9 velvet.61212 100.0 True fake: scaffold gap size wrong estimation (local) 52673846 52675098 863859 862607 NC_000014.9 velvet.61212 99.12 True fake: scaffold gap size wrong estimation (local) 52670511 52672022 868070 866559 NC_000014.9 velvet.61212 100.0 True fake: scaffold gap size wrong estimation (local) 52666907 52667557 872010 871360 NC_000014.9 velvet.61212 100.0 True fake: scaffold gap size wrong estimation (local) 52663601 52664694 875899 874806 NC_000014.9 velvet.61212 99.82 True fake: scaffold gap size wrong estimation (local) 52660106 52663308 879890 876688 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = 41175393 93839417 93840884 880606 882073 NC_000014.9 velvet.61212 99.86 True fake: scaffold gap size wrong estimation (local) 93840981 93841552 882157 882728 NC_000014.9 velvet.61212 99.3 True fake: scaffold gap size wrong estimation (local) 93841692 93844882 883009 886199 NC_000014.9 velvet.61212 99.78 True fake: scaffold gap size wrong estimation (local) 93845158 93845757 887386 887985 NC_000014.9 velvet.61212 99.83 True fake: scaffold gap size wrong estimation (local) 93845842 93846801 888110 889062 NC_000014.9 velvet.61212 99.17 True relocation, scaffold gap is present, inconsistency = 54849427 38993452 38996399 892665 889078 NC_000014.9 velvet.61212 99.97 True fake: not a misassembly (possible transposable element) 38918388 38920517 892676 894805 NC_000014.9 velvet.61212 99.95 True fake: not a misassembly (possible transposable element) 38989098 38993287 899236 894816 NC_000014.9 velvet.61212 99.15 True fake: not a misassembly (possible transposable element) 52641579 52644069 902035 899545 NC_000014.9 velvet.61212 99.92 True fake: not a misassembly (possible transposable element) 38987542 38988733 903303 902112 NC_000014.9 velvet.61212 100.0 True fake: not a misassembly (possible transposable element) 43444515 43446579 903314 905378 NC_000014.9 velvet.61212 99.85 True fake: not a misassembly (possible transposable element) 38986538 38987381 906310 905467 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = 9364164 29621331 29622363 907353 906321 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = 49597040 79219414 79220789 907364 908739 NC_000014.9 velvet.61212 99.85 True relocation, scaffold gap is present, inconsistency = 26578096 52639646 52641307 910411 908750 NC_000014.9 velvet.61212 99.94 True relocation, scaffold gap is present, inconsistency = 5522105 47116403 47117038 911549 910914 NC_000014.9 velvet.61212 99.84 True relocation, scaffold gap is present, inconsistency = 14733392 61850441 61851272 911560 912391 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = -3264981 58586302 58588153 912402 914293 NC_000014.9 velvet.61212 99.78 True relocation, scaffold gap is present, inconsistency = 8741721 67329885 67330470 914304 914889 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = -38800034 28531252 28531883 915705 916336 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = 17467552 46002226 46002967 919868 919127 NC_000014.9 velvet.61212 99.73 True relocation, scaffold gap is present, inconsistency = 37180883 83186734 83187234 922752 923252 NC_000014.9 velvet.61212 99.8 True relocation, scaffold gap is present, inconsistency = 8614222 74571283 74572275 924472 923489 NC_000014.9 velvet.61212 98.98 True relocation, scaffold gap is present, inconsistency = 6681244 67888585 67889337 925174 925926 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = -36754982 31134600 31135764 926171 927335 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = 27384957 58520732 58521373 927346 927987 NC_000014.9 velvet.61212 99.84 True fake: scaffold gap size wrong estimation (local) 58521905 58524814 929223 932140 NC_000014.9 velvet.61212 99.21 True relocation, scaffold gap is present, inconsistency = 37311369 21201938 21210525 940737 932151 NC_000014.9 velvet.61212 99.9 True fake: scaffold gap size wrong estimation (local) 21198859 21201687 944575 941747 NC_000014.9 velvet.61212 99.96 True fake: scaffold gap size wrong estimation (local) 21197196 21198297 946766 945665 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = 37494162 58692776 58694339 947083 948646 NC_000014.9 velvet.61212 99.17 True relocation, scaffold gap is present, inconsistency = 30029547 88724274 88727034 951794 949034 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = 57578847 31143723 31145415 951806 953498 NC_000014.9 velvet.61212 100.0 True fake: scaffold gap size wrong estimation (local) 31146000 31146638 955552 956190 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = 9950928 21194199 21195061 957100 956201 NC_000014.9 velvet.61212 99.88 True local misassembly 21195138 21196565 958527 957111 NC_000014.9 velvet.61212 99.22 True fake: scaffold gap size wrong estimation (local) 21187556 21188268 959250 958538 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = -8207 21192175 21193817 962838 961196 NC_000014.9 velvet.61212 100.0 True relocation, scaffold gap is present, inconsistency = 47822593 69017442 69019938 963870 966251 NC_000014.9 velvet.61212 95.26 True relocation, scaffold gap is present, inconsistency = 24857297 93877541 93882447 966557 971389 NC_000014.9 velvet.61212 98.32 True relocation, scaffold gap is present, inconsistency = 13331 93896851 93901044 972462 976655 NC_000014.9 velvet.61212 99.71 True relocation, scaffold gap is present, inconsistency = 54928725 38955723 38965446 989084 979335 NC_000014.9 velvet.61212 98.4 True fake: scaffold gap size wrong estimation (local) 38952406 38955442 993272 990175 NC_000014.9 velvet.61212 99.44 True relocation, scaffold gap is present, inconsistency = -8488262 47435120 47440657 999055 993283 NC_000014.9 velvet.61212 99.84 True fake: scaffold gap size wrong estimation (local) 47429280 47434861 1006456 1000084 NC_000014.9 velvet.61212 99.95 True fake: not a misassembly (possible transposable element) 38920519 38922136 1024641 1023025 NC_000014.9 velvet.61212 99.38 True fake: not a misassembly (possible transposable element) 47408315 47412369 1028706 1024652 NC_000014.9 velvet.61212 99.88 True fake: scaffold gap size wrong estimation (local) 47404525 47408077 1033238 1029616 NC_000014.9 velvet.61212 99.88 True fake: scaffold gap size wrong estimation (local) 47401062 47404143 1037859 1034173 NC_000014.9 velvet.61212 99.05 True fake: scaffold gap size wrong estimation (local) 47399622 47400559 1039634 1038697 NC_000014.9 velvet.61212 99.89 True fake: scaffold gap size wrong estimation (local) 47370504 47377507 1066000 1058879 NC_000014.9 velvet.61212 99.5 True fake: scaffold gap size wrong estimation (local) 47364534 47370292 1073966 1066802 NC_000014.9 velvet.61212 96.56 True fake: scaffold gap size wrong estimation (local) 47363507 47364328 1075283 1074462 NC_000014.9 velvet.61212 100.0 True fake: scaffold gap size wrong estimation (local) 47360378 47363250 1079129 1075999 NC_000014.9 velvet.61212 99.89 True fake: scaffold gap size wrong estimation (local) 47354075 47359067 1086255 1081263 NC_000014.9 velvet.61212 99.94 True fake: scaffold gap size wrong estimation (local) 47352514 47354074 1090344 1088784 NC_000014.9 velvet.61212 99.3 True local misassembly 47351352 47351910 1091160 1090602 NC_000014.9 velvet.61212 99.46 True fake: scaffold gap size wrong estimation (local) 47342144 47348120 1097262 1091291 NC_000014.9 velvet.61212 99.78 True fake: scaffold gap size wrong estimation (local) 47324224 47341925 1118902 1098210 NC_000014.9 velvet.61212 99.81 True fake: scaffold gap size wrong estimation (local) 47308513 47323145 1136185 1120496 NC_000014.9 velvet.61212 99.82 True fake: scaffold gap size wrong estimation (local) 47303002 47307444 1142390 1137965 NC_000014.9 velvet.61212 99.37 True fake: scaffold gap size wrong estimation (local) 47286842 47295925 1157237 1147138 NC_000014.9 velvet.61212 99.6 True fake: scaffold gap size wrong estimation (local) 47253293 47258236 1187706 1182136 NC_000014.9 velvet.61212 98.15 True fake: scaffold gap size wrong estimation (local) 47249462 47253112 1191971 1188321 NC_000014.9 velvet.61212 99.95 True relocation, scaffold gap is present, inconsistency = 25964196 21260966 21265534 1216225 1211703 NC_000014.9 velvet.61212 98.99 True fake: scaffold gap size wrong estimation (local) 21258380 21259866 1219867 1218381 NC_000014.9 velvet.61212 99.33 True fake: not a misassembly (possible transposable element) 47219339 47221403 1222422 1220358 NC_000014.9 velvet.61212 99.95 True fake: not a misassembly (possible transposable element) 21254922 21256175 1224214 1222961 NC_000014.9 velvet.61212 99.12 True local misassembly 21254110 21254625 1224730 1224215 NC_000014.9 velvet.61212 100.0 True inversion, scaffold gap is present 21251673 21252386 1226398 1227111 NC_000014.9 velvet.61212 100.0 True CONTIG velvet.61212 1227664 misassembled 67911036 67912721 1 1686 NC_000014.9 velvet.61221 100.0 True relocation, scaffold gap is present, inconsistency = 31789393 99705896 99708204 5468 7814 NC_000014.9 velvet.61221 99.74 True fake: scaffold gap size wrong estimation (local) 99738264 99745104 32728 40377 NC_000014.9 velvet.61221 99.87 True fake: scaffold gap size wrong estimation (local) 99745354 99747086 41392 43124 NC_000014.9 velvet.61221 99.83 True fake: scaffold gap size wrong estimation (local) 99747216 99748542 43558 44884 NC_000014.9 velvet.61221 99.92 True fake: scaffold gap size wrong estimation (local) 99748670 99753160 45586 50076 NC_000014.9 velvet.61221 99.73 True fake: not a misassembly (possible transposable element) 99757341 99759829 52575 50087 NC_000014.9 velvet.61221 99.8 True fake: not a misassembly (possible transposable element) 99760119 99761668 52586 54135 NC_000014.9 velvet.61221 99.94 True local misassembly 99761947 99762554 54136 54743 NC_000014.9 velvet.61221 98.19 True relocation, scaffold gap is present, inconsistency = -71152806 28609759 28611950 54754 56945 NC_000014.9 velvet.61221 99.68 True relocation, scaffold gap is present, inconsistency = 71141287 99753248 99757186 56956 60894 NC_000014.9 velvet.61221 99.82 True fake: scaffold gap size wrong estimation (local) 99762617 99764983 69724 72167 NC_000014.9 velvet.61221 95.04 True fake: scaffold gap size wrong estimation (local) 99766495 99767346 74673 75524 NC_000014.9 velvet.61221 99.53 True relocation, scaffold gap is present, inconsistency = -71126373 28642911 28643842 77462 78385 NC_000014.9 velvet.61221 99.13 True fake: scaffold gap size wrong estimation (local) 28644084 28647120 79544 82580 NC_000014.9 velvet.61221 99.84 True fake: scaffold gap size wrong estimation (local) 28647921 28648420 84074 84573 NC_000014.9 velvet.61221 100.0 True relocation, scaffold gap is present, inconsistency = 71134985 99794371 99796503 95539 97706 NC_000014.9 velvet.61221 99.95 True fake: scaffold gap size wrong estimation (local) 99796944 99798409 98950 100415 NC_000014.9 velvet.61221 99.93 True fake: scaffold gap size wrong estimation (local) 99826415 99828775 128833 131193 NC_000014.9 velvet.61221 100.0 True fake: not a misassembly (possible transposable element) 99836237 99837014 151808 152585 NC_000014.9 velvet.61221 98.71 True fake: not a misassembly (possible transposable element) 99844510 99845809 152587 153886 NC_000014.9 velvet.61221 100.0 True fake: not a misassembly (possible transposable element) 99837015 99837882 153887 154754 NC_000014.9 velvet.61221 98.73 True fake: not a misassembly (possible transposable element) 99851609 99852593 156585 157569 NC_000014.9 velvet.61221 99.9 True inversion, scaffold gap is present 99850175 99851312 158926 157789 NC_000014.9 velvet.61221 99.91 True fake: scaffold gap size wrong estimation (local) 99846555 99848852 164021 161724 NC_000014.9 velvet.61221 99.91 True relocation, scaffold gap is present, inconsistency = -9093 99853940 99855635 165729 164034 NC_000014.9 velvet.61221 100.0 True fake: scaffold gap size wrong estimation (local) 99852567 99853696 167534 166405 NC_000014.9 velvet.61221 100.0 True relocation, scaffold gap is present, inconsistency = -9114 99858457 99861504 170758 167711 NC_000014.9 velvet.61221 99.97 True inversion, scaffold gap is present 99855699 99857016 170769 172086 NC_000014.9 velvet.61221 99.77 True fake: scaffold gap size wrong estimation (local) 99861783 99864598 176838 179653 NC_000014.9 velvet.61221 100.0 True fake: scaffold gap size wrong estimation (local) 99864832 99866188 180386 181742 NC_000014.9 velvet.61221 100.0 True fake: scaffold gap size wrong estimation (local) 99866602 99868062 182374 183834 NC_000014.9 velvet.61221 100.0 True relocation, scaffold gap is present, inconsistency = 11279 99879352 99881619 183845 186112 NC_000014.9 velvet.61221 100.0 True fake: scaffold gap size wrong estimation (local) 99881907 99882660 187344 188097 NC_000014.9 velvet.61221 100.0 True relocation, scaffold gap is present, inconsistency = 60811 99811644 99815129 198492 194064 NC_000014.9 velvet.61221 99.68 True relocation, scaffold gap is present, inconsistency = 56409 99871549 99875644 198503 202598 NC_000014.9 velvet.61221 100.0 True fake: scaffold gap size wrong estimation (local) 99876206 99879320 204028 207142 NC_000014.9 velvet.61221 99.58 True fake: scaffold gap size wrong estimation (local) 99883390 99895347 207153 222195 NC_000014.9 velvet.61221 96.4 True fake: scaffold gap size wrong estimation (local) 99900485 99901597 222843 223955 NC_000014.9 velvet.61221 100.0 True fake: scaffold gap size wrong estimation (local) 99902220 99903814 225003 226597 NC_000014.9 velvet.61221 99.62 True fake: scaffold gap size wrong estimation (local) 99904083 99905485 227294 228696 NC_000014.9 velvet.61221 100.0 True fake: scaffold gap size wrong estimation (local) 99905860 99911913 229934 235986 NC_000014.9 velvet.61221 99.85 True relocation, scaffold gap is present, inconsistency = -16125 99895799 99896752 235997 236950 NC_000014.9 velvet.61221 99.9 True fake: scaffold gap size wrong estimation (local) 99896886 99898498 237338 238950 NC_000014.9 velvet.61221 99.81 True relocation, scaffold gap is present, inconsistency = 14441 99914028 99915157 240039 241168 NC_000014.9 velvet.61221 99.82 True fake: scaffold gap size wrong estimation (local) 99915445 99918167 244178 247052 NC_000014.9 velvet.61221 98.53 True local misassembly 99912151 99913165 247160 248174 NC_000014.9 velvet.61221 99.9 True fake: scaffold gap size wrong estimation (local) 99918257 99922214 248693 252781 NC_000014.9 velvet.61221 99.87 True fake: scaffold gap size wrong estimation (local) 99923966 99925495 255264 256785 NC_000014.9 velvet.61221 99.41 True local misassembly 99922411 99922987 256796 257372 NC_000014.9 velvet.61221 100.0 True fake: scaffold gap size wrong estimation (local) 99927042 99927849 260071 260878 NC_000014.9 velvet.61221 99.75 True local misassembly 99925523 99926294 260939 261710 NC_000014.9 velvet.61221 100.0 True fake: scaffold gap size wrong estimation (local) 99928250 99932385 263207 267342 NC_000014.9 velvet.61221 99.95 True fake: scaffold gap size wrong estimation (local) 99934105 99935225 269781 270901 NC_000014.9 velvet.61221 99.91 True fake: scaffold gap size wrong estimation (local) 99935820 99942590 272355 279125 NC_000014.9 velvet.61221 99.9 True fake: scaffold gap size wrong estimation (local) 99946128 99948462 279136 281468 NC_000014.9 velvet.61221 99.36 True fake: scaffold gap size wrong estimation (local) 99950203 99954177 284097 288059 NC_000014.9 velvet.61221 99.3 True fake: scaffold gap size wrong estimation (local) 99954444 99956869 289341 291753 NC_000014.9 velvet.61221 99.26 True relocation, scaffold gap is present, inconsistency = -16822 99943070 99944973 294776 296662 NC_000014.9 velvet.61221 99.05 True fake: scaffold gap size wrong estimation (local) 99958220 99958995 307666 308432 NC_000014.9 velvet.61221 98.83 True fake: scaffold gap size wrong estimation (local) 99959474 99961150 309108 311154 NC_000014.9 velvet.61221 99.88 True fake: scaffold gap size wrong estimation (local) 99962001 99962547 312602 313148 NC_000014.9 velvet.61221 100.0 True fake: scaffold gap size wrong estimation (local) 99964443 99970558 315823 322278 NC_000014.9 velvet.61221 99.97 True fake: scaffold gap size wrong estimation (local) 99970822 99971770 323116 324064 NC_000014.9 velvet.61221 99.79 True fake: scaffold gap size wrong estimation (local) 99972134 99973492 324799 326157 NC_000014.9 velvet.61221 100.0 True fake: scaffold gap size wrong estimation (local) 99973754 99975033 326747 328026 NC_000014.9 velvet.61221 99.92 True fake: scaffold gap size wrong estimation (local) 99975034 99976206 328673 329845 NC_000014.9 velvet.61221 97.78 True local misassembly 99976333 99977448 329846 330961 NC_000014.9 velvet.61221 99.1 True fake: scaffold gap size wrong estimation (local) 99978433 99979593 332757 333917 NC_000014.9 velvet.61221 99.91 True fake: scaffold gap size wrong estimation (local) 99979905 99980982 334351 335428 NC_000014.9 velvet.61221 100.0 True inversion, scaffold gap is present 100006929 100009779 359745 356904 NC_000014.9 velvet.61221 99.61 True fake: scaffold gap size wrong estimation (local) 99994113 99998251 369920 365027 NC_000014.9 velvet.61221 98.03 True relocation, scaffold gap is present, inconsistency = 70272155 29720786 29721657 371092 370221 NC_000014.9 velvet.61221 99.77 True fake: scaffold gap size wrong estimation (local) 29718478 29720500 374174 372152 NC_000014.9 velvet.61221 99.95 True fake: not a misassembly (possible transposable element) 100010679 100014235 374185 377668 NC_000014.9 velvet.61221 97.92 True fake: not a misassembly (possible transposable element) 29713364 29714290 378605 377679 NC_000014.9 velvet.61221 100.0 True local misassembly 29715056 29718339 382186 378903 NC_000014.9 velvet.61221 99.94 True relocation, scaffold gap is present, inconsistency = -4112292 33822997 33824074 386537 385460 NC_000014.9 velvet.61221 99.81 True relocation, scaffold gap is present, inconsistency = -66193642 100014622 100015783 388554 387393 NC_000014.9 velvet.61221 99.91 True relocation, scaffold gap is present, inconsistency = 61454040 38558556 38560571 390511 388565 NC_000014.9 velvet.61221 96.23 True fake: scaffold gap size wrong estimation (local) 38552100 38556855 399081 393477 NC_000014.9 velvet.61221 99.94 True fake: scaffold gap size wrong estimation (local) 38546890 38548776 401995 400109 NC_000014.9 velvet.61221 99.89 True fake: scaffold gap size wrong estimation (local) 38544294 38546478 405340 403132 NC_000014.9 velvet.61221 99.86 True fake: scaffold gap size wrong estimation (local) 38543398 38544025 406269 405642 NC_000014.9 velvet.61221 98.41 True fake: scaffold gap size wrong estimation (local) 38541012 38542605 409227 407636 NC_000014.9 velvet.61221 99.69 True relocation, scaffold gap is present, inconsistency = 18037 38560653 38563323 409238 411908 NC_000014.9 velvet.61221 99.93 True fake: scaffold gap size wrong estimation (local) 38563608 38573529 412981 424578 NC_000014.9 velvet.61221 97.95 True fake: scaffold gap size wrong estimation (local) 38574140 38574818 425866 426544 NC_000014.9 velvet.61221 99.85 True local misassembly 38574905 38575452 426545 427092 NC_000014.9 velvet.61221 97.81 True relocation, scaffold gap is present, inconsistency = 51228 38631154 38632115 431566 432527 NC_000014.9 velvet.61221 100.0 True relocation, scaffold gap is present, inconsistency = 9832 38620137 38621111 433712 432738 NC_000014.9 velvet.61221 100.0 True relocation, scaffold gap is present, inconsistency = -59109819 97727457 97728887 436211 434781 NC_000014.9 velvet.61221 100.0 True fake: scaffold gap size wrong estimation (local) 97725343 97727142 439011 437169 NC_000014.9 velvet.61221 99.89 True fake: scaffold gap size wrong estimation (local) 97723806 97725071 441231 439966 NC_000014.9 velvet.61221 98.74 True fake: scaffold gap size wrong estimation (local) 97721058 97723805 444060 441313 NC_000014.9 velvet.61221 99.85 True relocation, scaffold gap is present, inconsistency = 74756270 22962598 22963535 446250 445313 NC_000014.9 velvet.61221 100.0 True relocation, scaffold gap is present, inconsistency = -13001 22973097 22975588 448752 446261 NC_000014.9 velvet.61221 99.92 True fake: not a misassembly (possible transposable element) 97717095 97717848 449514 448763 NC_000014.9 velvet.61221 99.6 True fake: not a misassembly (possible transposable element) 22971121 22973017 451421 449525 NC_000014.9 velvet.61221 100.0 True fake: scaffold gap size wrong estimation (local) 22966358 22967280 452354 451432 NC_000014.9 velvet.61221 100.0 True fake: not a misassembly (possible transposable element) 97714308 97715101 453177 452384 NC_000014.9 velvet.61221 99.75 True fake: not a misassembly (possible transposable element) 22964023 22964883 455669 454809 NC_000014.9 velvet.61221 100.0 True fake: scaffold gap size wrong estimation (local) 22961551 22962447 459148 458252 NC_000014.9 velvet.61221 100.0 True fake: scaffold gap size wrong estimation (local) 22954985 22957409 462860 460384 NC_000014.9 velvet.61221 99.92 True fake: scaffold gap size wrong estimation (local) 22950131 22951004 463744 462871 NC_000014.9 velvet.61221 100.0 True relocation, scaffold gap is present, inconsistency = -15636507 38582816 38584834 467546 465548 NC_000014.9 velvet.61221 99.0 True fake: scaffold gap size wrong estimation (local) 38579082 38582581 472228 468243 NC_000014.9 velvet.61221 99.94 True fake: scaffold gap size wrong estimation (local) 38576911 38578846 475218 473312 NC_000014.9 velvet.61221 98.34 True relocation, scaffold gap is present, inconsistency = -59119589 97690004 97690833 481714 480885 NC_000014.9 velvet.61221 100.0 True fake: scaffold gap size wrong estimation (local) 97687671 97689205 484918 483384 NC_000014.9 velvet.61221 99.74 True fake: scaffold gap size wrong estimation (local) 97683267 97686876 490156 486551 NC_000014.9 velvet.61221 99.81 True fake: scaffold gap size wrong estimation (local) 97680666 97683021 493525 491170 NC_000014.9 velvet.61221 99.87 True relocation, scaffold gap is present, inconsistency = 9276077 88401869 88402976 495138 496244 NC_000014.9 velvet.61221 99.91 True relocation, scaffold gap is present, inconsistency = 65457203 22944151 22944655 496759 496255 NC_000014.9 velvet.61221 100.0 True relocation, scaffold gap is present, inconsistency = -74739044 97651480 97659176 528459 520778 NC_000014.9 velvet.61221 99.68 True fake: scaffold gap size wrong estimation (local) 97645185 97651368 536709 529290 NC_000014.9 velvet.61221 99.82 True fake: scaffold gap size wrong estimation (local) 97643452 97644936 538204 536720 NC_000014.9 velvet.61221 100.0 True relocation, scaffold gap is present, inconsistency = 84809 97729825 97732500 538284 540960 NC_000014.9 velvet.61221 99.81 True fake: scaffold gap size wrong estimation (local) 97732594 97733372 541730 542508 NC_000014.9 velvet.61221 100.0 True fake: scaffold gap size wrong estimation (local) 97733598 97735262 542875 544539 NC_000014.9 velvet.61221 99.64 True fake: scaffold gap size wrong estimation (local) 97735362 97736747 545322 546707 NC_000014.9 velvet.61221 100.0 True relocation, scaffold gap is present, inconsistency = -30685420 67057374 67061086 552754 557171 NC_000014.9 velvet.61221 99.84 True fake: scaffold gap size wrong estimation (local) 67061309 67062718 557601 559012 NC_000014.9 velvet.61221 99.86 True relocation, scaffold gap is present, inconsistency = 10986393 78049122 78050700 560601 559023 NC_000014.9 velvet.61221 99.94 True relocation, scaffold gap is present, inconsistency = 10996203 67052222 67052781 561319 560739 NC_000014.9 velvet.61221 95.98 True fake: scaffold gap size wrong estimation (local) 67029610 67033289 581561 577848 NC_000014.9 velvet.61221 99.7 True fake: scaffold gap size wrong estimation (local) 67028581 67029323 583342 582600 NC_000014.9 velvet.61221 98.65 True indel: indel (<= 5bp) 67027508 67028575 584410 583343 NC_000014.9 velvet.61221 99.06 True fake: scaffold gap size wrong estimation (local) 67015633 67026629 597126 586076 NC_000014.9 velvet.61221 99.56 True fake: scaffold gap size wrong estimation (local) 67011577 67015436 601959 598100 NC_000014.9 velvet.61221 100.0 True fake: scaffold gap size wrong estimation (local) 67010556 67011392 603439 602603 NC_000014.9 velvet.61221 100.0 True fake: scaffold gap size wrong estimation (local) 67008806 67009809 605499 604496 NC_000014.9 velvet.61221 100.0 True relocation, scaffold gap is present, inconsistency = -30705182 97694708 97713977 624895 605510 NC_000014.9 velvet.61221 99.73 True fake: scaffold gap size wrong estimation (local) 97691067 97694517 629385 625935 NC_000014.9 velvet.61221 99.86 True relocation, scaffold gap is present, inconsistency = 9286349 88388213 88396883 637220 646024 NC_000014.9 velvet.61221 99.94 True fake: scaffold gap size wrong estimation (local) 88399078 88400581 649283 650786 NC_000014.9 velvet.61221 100.0 True relocation, scaffold gap is present, inconsistency = 9264575 97671269 97674663 660293 656899 NC_000014.9 velvet.61221 99.76 True fake: scaffold gap size wrong estimation (local) 97659738 97671019 673227 661063 NC_000014.9 velvet.61221 99.54 True fake: scaffold gap size wrong estimation (local) 97636358 97640577 690219 686018 NC_000014.9 velvet.61221 99.37 True fake: scaffold gap size wrong estimation (local) 97631405 97636082 696043 691119 NC_000014.9 velvet.61221 100.0 True relocation, scaffold gap is present, inconsistency = -13085 97640627 97643373 700620 697160 NC_000014.9 velvet.61221 97.71 True fake: scaffold gap size wrong estimation (local) 97610934 97611801 730097 729230 NC_000014.9 velvet.61221 100.0 True relocation, scaffold gap is present, inconsistency = -19984 97628892 97630907 732152 730108 NC_000014.9 velvet.61221 98.58 True fake: scaffold gap size wrong estimation (local) 97622002 97628318 739843 733527 NC_000014.9 velvet.61221 99.7 True fake: scaffold gap size wrong estimation (local) 97620705 97622001 741202 739906 NC_000014.9 velvet.61221 98.3 True fake: scaffold gap size wrong estimation (local) 97616472 97620704 745689 741457 NC_000014.9 velvet.61221 99.79 True fake: scaffold gap size wrong estimation (local) 97615599 97616471 749769 748897 NC_000014.9 velvet.61221 98.85 True indel: indel (> 5bp) 97614749 97615589 750610 749770 NC_000014.9 velvet.61221 100.0 True fake: scaffold gap size wrong estimation (local) 97611806 97614602 754191 751397 NC_000014.9 velvet.61221 99.86 True fake: scaffold gap size wrong estimation (local) 97584196 97607163 777504 754202 NC_000014.9 velvet.61221 99.96 True relocation, scaffold gap is present, inconsistency = 43783800 53786742 53799076 791367 778824 NC_000014.9 velvet.61221 99.05 True fake: scaffold gap size wrong estimation (local) 53782776 53786454 796201 792451 NC_000014.9 velvet.61221 99.86 True fake: scaffold gap size wrong estimation (local) 53766834 53782240 812935 797345 NC_000014.9 velvet.61221 99.54 True fake: scaffold gap size wrong estimation (local) 53764153 53766807 816489 813856 NC_000014.9 velvet.61221 99.09 True fake: scaffold gap size wrong estimation (local) 53761442 53764038 820347 817768 NC_000014.9 velvet.61221 99.27 True relocation, scaffold gap is present, inconsistency = -43813597 97551551 97575028 843899 820358 NC_000014.9 velvet.61221 99.87 True fake: scaffold gap size wrong estimation (local) 97546210 97551270 850475 844995 NC_000014.9 velvet.61221 99.74 True CONTIG velvet.61221 853204 misassembled 50547021 50548549 1529 1 NC_000014.9 velvet.61222 100.0 True fake: scaffold gap size wrong estimation (local) 50544729 50546906 4757 2544 NC_000014.9 velvet.61222 99.81 True CONTIG velvet.61222 35843 correct 45189969 45192397 2472 1 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45188320 45189685 4558 3193 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45185013 45188057 8437 5350 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45180685 45184375 13456 9766 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45179834 45180412 14900 14322 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45177662 45178921 18745 17486 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45174374 45177396 23188 20166 NC_000014.9 velvet.61230 99.97 True fake: scaffold gap size wrong estimation (local) 45171224 45174102 27108 24247 NC_000014.9 velvet.61230 97.93 True fake: scaffold gap size wrong estimation (local) 45169385 45171122 29111 27379 NC_000014.9 velvet.61230 99.54 True fake: scaffold gap size wrong estimation (local) 45166780 45168751 32650 30679 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45165518 45166113 34295 33700 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45162272 45165274 37971 34970 NC_000014.9 velvet.61230 99.97 True fake: scaffold gap size wrong estimation (local) 45160803 45162161 39957 38600 NC_000014.9 velvet.61230 99.48 True fake: scaffold gap size wrong estimation (local) 45156820 45159988 44697 41134 NC_000014.9 velvet.61230 95.66 True fake: scaffold gap size wrong estimation (local) 45155750 45156633 46419 45536 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45154383 45155523 47854 46714 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45144091 45145640 53124 51567 NC_000014.9 velvet.61230 99.94 True fake: scaffold gap size wrong estimation (local) 45142576 45143170 55491 54897 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45133456 45141030 65701 57524 NC_000014.9 velvet.61230 99.68 True fake: scaffold gap size wrong estimation (local) 45131629 45132410 68129 67348 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45128290 45131347 72027 68970 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45127399 45128056 77714 77057 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45119962 45122508 83913 81314 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45117230 45118360 87526 86404 NC_000014.9 velvet.61230 99.29 True fake: scaffold gap size wrong estimation (local) 45115290 45116594 90906 89602 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45099717 45101476 104055 102340 NC_000014.9 velvet.61230 97.26 True fake: scaffold gap size wrong estimation (local) 45098443 45099444 105509 104508 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45093828 45098135 110711 106264 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45092602 45093227 112637 112022 NC_000014.9 velvet.61230 98.38 True fake: scaffold gap size wrong estimation (local) 45087861 45092326 117388 112949 NC_000014.9 velvet.61230 97.99 True fake: scaffold gap size wrong estimation (local) 45086847 45087542 118745 118055 NC_000014.9 velvet.61230 99.28 True relocation, scaffold gap is present, inconsistency = -24543 45107911 45111379 122224 118756 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45106320 45107766 124494 123048 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45101992 45105513 129451 125981 NC_000014.9 velvet.61230 98.55 True relocation, scaffold gap is present, inconsistency = 12881 45086211 45086839 132351 131723 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45081987 45085918 141278 137293 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45078483 45080248 145671 143906 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45075928 45077250 149010 147688 NC_000014.9 velvet.61230 99.24 True fake: scaffold gap size wrong estimation (local) 45072665 45074819 153095 150941 NC_000014.9 velvet.61230 99.95 True fake: scaffold gap size wrong estimation (local) 45071288 45072439 155517 154367 NC_000014.9 velvet.61230 99.57 True fake: scaffold gap size wrong estimation (local) 45070342 45070908 156194 155628 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45069316 45069909 157664 157071 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45064396 45069131 163195 158424 NC_000014.9 velvet.61230 98.99 True fake: scaffold gap size wrong estimation (local) 45063741 45064308 164798 164231 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45060487 45063470 168084 165101 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45056070 45056754 170317 169633 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45054146 45055526 172243 170863 NC_000014.9 velvet.61230 99.35 True fake: scaffold gap size wrong estimation (local) 45053299 45054054 173434 172692 NC_000014.9 velvet.61230 98.28 True fake: scaffold gap size wrong estimation (local) 45051822 45053018 175526 174330 NC_000014.9 velvet.61230 99.16 True local misassembly 45050890 45051547 176184 175527 NC_000014.9 velvet.61230 100.0 True inversion, scaffold gap is present 45056792 45057520 178933 179661 NC_000014.9 velvet.61230 100.0 True indel: indel (> 5bp) 45057746 45058308 179922 180484 NC_000014.9 velvet.61230 99.47 True local misassembly 45058560 45059413 180485 181338 NC_000014.9 velvet.61230 95.9 True inversion, scaffold gap is present 45049528 45050316 187085 186297 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 45046331 45047113 191050 190268 NC_000014.9 velvet.61230 98.72 True fake: scaffold gap size wrong estimation (local) 45044529 45045508 193824 192845 NC_000014.9 velvet.61230 98.88 True fake: scaffold gap size wrong estimation (local) 45043415 45044015 194779 194179 NC_000014.9 velvet.61230 98.34 True fake: scaffold gap size wrong estimation (local) 45042025 45042920 195954 195059 NC_000014.9 velvet.61230 100.0 True indel: indel (<= 5bp) 45041365 45042023 196613 195955 NC_000014.9 velvet.61230 98.48 True fake: scaffold gap size wrong estimation (local) 45038012 45040754 200720 197978 NC_000014.9 velvet.61230 100.0 True relocation, scaffold gap is present, inconsistency = 13378315 31655773 31658498 204644 201919 NC_000014.9 velvet.61230 99.93 True fake: scaffold gap size wrong estimation (local) 31651946 31652885 205594 204655 NC_000014.9 velvet.61230 99.89 True relocation, scaffold gap is present, inconsistency = 40546909 72229051 72236679 234851 242479 NC_000014.9 velvet.61230 99.62 True fake: scaffold gap size wrong estimation (local) 72236680 72240906 245851 250077 NC_000014.9 velvet.61230 99.69 True fake: scaffold gap size wrong estimation (local) 72241185 72242855 251015 252685 NC_000014.9 velvet.61230 99.88 True fake: scaffold gap size wrong estimation (local) 72243006 72244840 252895 255354 NC_000014.9 velvet.61230 99.65 True relocation, scaffold gap is present, inconsistency = 40608012 31627766 31634079 262729 256269 NC_000014.9 velvet.61230 99.92 True fake: scaffold gap size wrong estimation (local) 31626411 31627492 264892 263827 NC_000014.9 velvet.61230 98.51 True fake: scaffold gap size wrong estimation (local) 31624837 31625461 266242 265618 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 31621652 31624557 270300 267483 NC_000014.9 velvet.61230 96.04 True relocation, scaffold gap is present, inconsistency = -37971838 69589593 69590185 274197 273605 NC_000014.9 velvet.61230 100.0 True relocation, scaffold gap is present, inconsistency = 11982 69576088 69577342 275720 274466 NC_000014.9 velvet.61230 99.12 True fake: scaffold gap size wrong estimation (local) 69573096 69575395 279504 277205 NC_000014.9 velvet.61230 99.87 True relocation, scaffold gap is present, inconsistency = 10104 69559341 69562968 283155 279528 NC_000014.9 velvet.61230 99.89 True relocation, scaffold gap is present, inconsistency = 2704283 72267262 72269567 283166 285449 NC_000014.9 velvet.61230 98.82 True fake: scaffold gap size wrong estimation (local) 72269868 72271187 286436 287755 NC_000014.9 velvet.61230 100.0 True relocation, scaffold gap is present, inconsistency = 27007783 99284108 99285058 293843 292893 NC_000014.9 velvet.61230 100.0 True relocation, scaffold gap is present, inconsistency = 67676250 31606313 31607098 295388 294603 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 31603312 31606081 299150 296335 NC_000014.9 velvet.61230 99.96 True fake: scaffold gap size wrong estimation (extensive) 31591434 31593226 301038 299246 NC_000014.9 velvet.61230 99.94 True fake: scaffold gap size wrong estimation (local) 31588916 31591253 304353 301852 NC_000014.9 velvet.61230 98.57 True fake: not a misassembly (possible transposable element) 35805958 35809971 308490 304364 NC_000014.9 velvet.61230 100.0 True fake: not a misassembly (possible transposable element) 31585187 31588608 311947 308527 NC_000014.9 velvet.61230 99.88 True relocation, scaffold gap is present, inconsistency = -42501202 74082651 74086378 315685 311958 NC_000014.9 velvet.61230 99.89 True relocation, scaffold gap is present, inconsistency = 41155423 32925184 32927217 315696 317726 NC_000014.9 velvet.61230 99.56 True inversion, scaffold gap is present 32927225 32928478 318990 317737 NC_000014.9 velvet.61230 99.68 True relocation, scaffold gap is present, inconsistency = 2779704 35712260 35713843 323068 324651 NC_000014.9 velvet.61230 99.37 True fake: scaffold gap size wrong estimation (local) 35714123 35716145 325565 327587 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 35716538 35717189 328661 329312 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 35717851 35718564 330215 330928 NC_000014.9 velvet.61230 98.6 True fake: scaffold gap size wrong estimation (local) 35719276 35719853 331792 332369 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 35720053 35722373 333279 335599 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 35722645 35727173 336778 341449 NC_000014.9 velvet.61230 99.89 True fake: scaffold gap size wrong estimation (local) 35727355 35728747 342139 343531 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 35729039 35731599 344446 347053 NC_000014.9 velvet.61230 99.84 True fake: scaffold gap size wrong estimation (local) 35731800 35732377 347805 348381 NC_000014.9 velvet.61230 99.48 True fake: scaffold gap size wrong estimation (local) 35735688 35736780 350530 351622 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 35738121 35740582 353659 356119 NC_000014.9 velvet.61230 99.96 True fake: scaffold gap size wrong estimation (local) 35740760 35744118 357112 360470 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 35744403 35745442 361204 362243 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 35745989 35747059 364355 365425 NC_000014.9 velvet.61230 99.07 True indel: indel (> 5bp) 35747121 35747907 365426 366212 NC_000014.9 velvet.61230 98.73 True relocation, scaffold gap is present, inconsistency = 34544289 70317519 70318728 393705 391535 NC_000014.9 velvet.61230 99.83 True indel: indel (> 5bp) 70314612 70317391 396552 393773 NC_000014.9 velvet.61230 99.93 True fake: scaffold gap size wrong estimation (local) 70310977 70311562 402327 401742 NC_000014.9 velvet.61230 99.83 True fake: scaffold gap size wrong estimation (extensive) 70279514 70280429 424687 423772 NC_000014.9 velvet.61230 99.78 True fake: scaffold gap size wrong estimation (local) 70278148 70279296 426108 424958 NC_000014.9 velvet.61230 99.74 True fake: scaffold gap size wrong estimation (local) 70272523 70277907 432509 427067 NC_000014.9 velvet.61230 99.81 True fake: scaffold gap size wrong estimation (local) 70271119 70272175 434517 433461 NC_000014.9 velvet.61230 99.91 True relocation, scaffold gap is present, inconsistency = 34491270 35777820 35779838 436546 434528 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 35776387 35777617 438171 436970 NC_000014.9 velvet.61230 97.62 True fake: scaffold gap size wrong estimation (local) 35771341 35776099 444684 439062 NC_000014.9 velvet.61230 99.98 True fake: scaffold gap size wrong estimation (local) 35769049 35771105 448821 446765 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 35765757 35767412 452777 451122 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 35762529 35765515 457022 453345 NC_000014.9 velvet.61230 96.92 True fake: scaffold gap size wrong estimation (local) 35759914 35762224 460330 458020 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (local) 35758244 35759577 462838 461506 NC_000014.9 velvet.61230 99.78 True relocation, scaffold gap is present, inconsistency = 2869106 32887701 32888958 463018 464275 NC_000014.9 velvet.61230 99.92 True fake: not a misassembly (possible transposable element) 74047480 74048909 465715 464286 NC_000014.9 velvet.61230 99.93 True fake: not a misassembly (possible transposable element) 32889237 32891248 466394 468470 NC_000014.9 velvet.61230 99.7 True relocation, scaffold gap is present, inconsistency = 41163670 74055453 74056047 469005 469599 NC_000014.9 velvet.61230 100.0 True relocation, scaffold gap is present, inconsistency = -10447 74045611 74046408 469610 470407 NC_000014.9 velvet.61230 100.0 True fake: scaffold gap size wrong estimation (extensive) 74056686 74058075 472516 473905 NC_000014.9 velvet.61230 99.93 True relocation, scaffold gap is present, inconsistency = -8659 74049698 74050615 474187 475104 NC_000014.9 velvet.61230 99.89 True fake: scaffold gap size wrong estimation (extensive) 74059716 74061015 476445 477744 NC_000014.9 velvet.61230 99.92 True relocation, scaffold gap is present, inconsistency = 7342 74051855 74052363 478263 477755 NC_000014.9 velvet.61230 100.0 True relocation, scaffold gap is present, inconsistency = 41147923 32891757 32903921 478274 491270 NC_000014.9 velvet.61230 99.75 True relocation, scaffold gap is present, inconsistency = 22592 32934879 32938446 503789 499636 NC_000014.9 velvet.61230 99.94 True fake: scaffold gap size wrong estimation (local) 32928771 32934316 510510 504965 NC_000014.9 velvet.61230 99.89 True inversion, scaffold gap is present 32923186 32924897 511808 513451 NC_000014.9 velvet.61230 95.95 True CONTIG velvet.61230 513514 misassembled 74385916 74388620 152 2856 NC_000014.9 velvet.61237 99.96 True relocation, scaffold gap is present, inconsistency = -5487444 68907581 68908636 9261 10316 NC_000014.9 velvet.61237 100.0 True relocation, scaffold gap is present, inconsistency = -8291 68901542 68903326 11513 13297 NC_000014.9 velvet.61237 100.0 True fake: scaffold gap size wrong estimation (extensive) 68912681 68913991 13605 14915 NC_000014.9 velvet.61237 100.0 True fake: scaffold gap size wrong estimation (local) 68915851 68917815 17467 19431 NC_000014.9 velvet.61237 100.0 True fake: scaffold gap size wrong estimation (local) 68940701 68942290 42517 44106 NC_000014.9 velvet.61237 99.94 True fake: scaffold gap size wrong estimation (local) 68942410 68945002 44940 47532 NC_000014.9 velvet.61237 99.96 True fake: scaffold gap size wrong estimation (local) 68945204 68948337 48552 51685 NC_000014.9 velvet.61237 99.97 True fake: scaffold gap size wrong estimation (local) 68954628 68959692 51696 56760 NC_000014.9 velvet.61237 99.92 True relocation, scaffold gap is present, inconsistency = 5644649 74606859 74607914 60333 59278 NC_000014.9 velvet.61237 100.0 True fake: scaffold gap size wrong estimation (local) 74604761 74606571 62553 60743 NC_000014.9 velvet.61237 99.94 True fake: scaffold gap size wrong estimation (local) 74603398 74604538 64487 63307 NC_000014.9 velvet.61237 99.91 True fake: scaffold gap size wrong estimation (local) 74596246 74603140 72270 65379 NC_000014.9 velvet.61237 99.88 True fake: scaffold gap size wrong estimation (local) 74590535 74595747 78722 73533 NC_000014.9 velvet.61237 99.42 True relocation, scaffold gap is present, inconsistency = 35387502 39202002 39203022 78733 79753 NC_000014.9 velvet.61237 100.0 True relocation, scaffold gap is present, inconsistency = 28056540 67259871 67265607 80062 85795 NC_000014.9 velvet.61237 99.95 True fake: scaffold gap size wrong estimation (local) 67265887 67266401 86660 87174 NC_000014.9 velvet.61237 100.0 True relocation, scaffold gap is present, inconsistency = 1718344 68986117 68988110 88546 90539 NC_000014.9 velvet.61237 100.0 True fake: scaffold gap size wrong estimation (local) 68988904 68990074 91966 93136 NC_000014.9 velvet.61237 98.12 True fake: scaffold gap size wrong estimation (local) 68990514 68991260 93897 94643 NC_000014.9 velvet.61237 100.0 True fake: scaffold gap size wrong estimation (local) 68991539 68993253 95381 97095 NC_000014.9 velvet.61237 99.83 True fake: not a misassembly (possible transposable element) 74572448 74577496 102703 97655 NC_000014.9 velvet.61237 99.9 True fake: not a misassembly (possible transposable element) 68993294 68995290 102878 104874 NC_000014.9 velvet.61237 99.9 True fake: scaffold gap size wrong estimation (local) 68995550 68996135 105740 106325 NC_000014.9 velvet.61237 100.0 True fake: scaffold gap size wrong estimation (local) 68997462 68998735 108131 109404 NC_000014.9 velvet.61237 99.92 True fake: scaffold gap size wrong estimation (extensive) 69008340 69009075 111119 111854 NC_000014.9 velvet.61237 99.86 True relocation, scaffold gap is present, inconsistency = -9351 69000555 69002552 112685 114682 NC_000014.9 velvet.61237 99.8 True relocation, scaffold gap is present, inconsistency = 27619 69049459 69050497 133970 135008 NC_000014.9 velvet.61237 100.0 True relocation, scaffold gap is present, inconsistency = -15628 69036057 69041163 136196 141996 NC_000014.9 velvet.61237 99.96 True fake: scaffold gap size wrong estimation (local) 69041350 69048219 142967 149836 NC_000014.9 velvet.61237 99.97 True fake: scaffold gap size wrong estimation (extensive) 69073437 69074777 166179 167519 NC_000014.9 velvet.61237 100.0 True fake: scaffold gap size wrong estimation (local) 69076148 69077393 169747 170992 NC_000014.9 velvet.61237 100.0 True fake: scaffold gap size wrong estimation (local) 69077657 69078609 171488 172440 NC_000014.9 velvet.61237 100.0 True fake: scaffold gap size wrong estimation (local) 69078926 69082465 173616 177155 NC_000014.9 velvet.61237 97.6 True indel: indel (<= 5bp) 69082466 69086113 177160 180807 NC_000014.9 velvet.61237 99.97 True relocation, scaffold gap is present, inconsistency = 33645902 35434535 35436553 182757 180818 NC_000014.9 velvet.61237 95.92 True local misassembly 35436998 35437747 183517 182768 NC_000014.9 velvet.61237 100.0 True fake: scaffold gap size wrong estimation (local) 35404568 35407572 212710 209706 NC_000014.9 velvet.61237 99.77 True fake: not a misassembly (possible transposable element) 69110911 69112612 212721 214422 NC_000014.9 velvet.61237 100.0 True fake: not a misassembly (possible transposable element) 35399956 35404139 218634 214433 NC_000014.9 velvet.61237 99.38 True relocation, scaffold gap is present, inconsistency = 54671027 90075778 90076894 219246 220362 NC_000014.9 velvet.61237 99.91 True relocation, scaffold gap is present, inconsistency = 53033801 37040441 37041734 221898 220605 NC_000014.9 velvet.61237 99.46 True relocation, scaffold gap is present, inconsistency = 32078661 69120406 69123731 221909 225201 NC_000014.9 velvet.61237 98.98 True relocation, scaffold gap is present, inconsistency = 47383 69069877 69070779 228347 227445 NC_000014.9 velvet.61237 98.89 True fake: scaffold gap size wrong estimation (local) 69068699 69069711 230199 229187 NC_000014.9 velvet.61237 99.9 True fake: scaffold gap size wrong estimation (local) 69067894 69068414 231064 230544 NC_000014.9 velvet.61237 100.0 True fake: scaffold gap size wrong estimation (local) 69066407 69067332 233100 232175 NC_000014.9 velvet.61237 100.0 True fake: scaffold gap size wrong estimation (local) 69065367 69066121 234080 233326 NC_000014.9 velvet.61237 100.0 True fake: scaffold gap size wrong estimation (local) 69062169 69065094 238017 235092 NC_000014.9 velvet.61237 99.97 True relocation, scaffold gap is present, inconsistency = -36440 69097860 69098598 238766 238028 NC_000014.9 velvet.61237 100.0 True fake: scaffold gap size wrong estimation (local) 69092495 69097554 244742 239683 NC_000014.9 velvet.61237 100.0 True relocation, scaffold gap is present, inconsistency = 3054602 72153016 72153557 245602 246143 NC_000014.9 velvet.61237 100.0 True local misassembly 72152280 72153014 248050 248784 NC_000014.9 velvet.61237 99.59 True fake: scaffold gap size wrong estimation (local) 72157998 72160969 248795 252622 NC_000014.9 velvet.61237 99.97 True relocation, scaffold gap is present, inconsistency = 41333904 30821890 30823571 254826 253145 NC_000014.9 velvet.61237 99.88 True fake: scaffold gap size wrong estimation (local) 30818288 30821858 259122 255523 NC_000014.9 velvet.61237 99.11 True fake: scaffold gap size wrong estimation (local) 30816743 30818256 261339 259826 NC_000014.9 velvet.61237 99.93 True relocation, scaffold gap is present, inconsistency = 41342317 72161334 72162684 262100 263444 NC_000014.9 velvet.61237 99.41 True relocation, scaffold gap is present, inconsistency = 30340829 102503586 102509503 263517 269571 NC_000014.9 velvet.61237 99.9 True fake: scaffold gap size wrong estimation (local) 102509794 102513656 270660 274533 NC_000014.9 velvet.61237 99.56 True fake: scaffold gap size wrong estimation (local) 102535957 102536630 295343 296016 NC_000014.9 velvet.61237 100.0 True fake: scaffold gap size wrong estimation (local) 102537243 102541174 297539 301470 NC_000014.9 velvet.61237 99.85 True fake: scaffold gap size wrong estimation (local) 102548329 102549511 304082 305264 NC_000014.9 velvet.61237 100.0 True fake: not a misassembly (possible transposable element) 69061262 69061962 305975 305275 NC_000014.9 velvet.61237 100.0 True fake: not a misassembly (possible transposable element) 102550174 102551438 306880 308145 NC_000014.9 velvet.61237 99.68 True fake: not a misassembly (possible transposable element) 69059122 69060518 310026 308630 NC_000014.9 velvet.61237 100.0 True fake: not a misassembly (possible transposable element) 102551720 102552550 310037 310867 NC_000014.9 velvet.61237 99.64 True local misassembly 102552768 102553328 310868 311428 NC_000014.9 velvet.61237 98.04 True fake: scaffold gap size wrong estimation (local) 102554602 102555851 313765 315014 NC_000014.9 velvet.61237 99.84 True relocation, scaffold gap is present, inconsistency = 56263414 46289043 46291177 317159 315025 NC_000014.9 velvet.61237 100.0 True fake: scaffold gap size wrong estimation (local) 46286930 46288300 320185 318815 NC_000014.9 velvet.61237 99.93 True fake: scaffold gap size wrong estimation (local) 46285103 46286320 322967 321750 NC_000014.9 velvet.61237 99.18 True fake: scaffold gap size wrong estimation (local) 46280759 46283685 328139 325211 NC_000014.9 velvet.61237 99.8 True fake: scaffold gap size wrong estimation (local) 46275231 46279196 333974 330018 NC_000014.9 velvet.61237 99.62 True fake: scaffold gap size wrong estimation (local) 46252755 46263844 354466 342218 NC_000014.9 velvet.61237 99.48 True fake: scaffold gap size wrong estimation (local) 46233309 46235792 367775 365292 NC_000014.9 velvet.61237 99.92 True fake: scaffold gap size wrong estimation (extensive) 46229996 46231070 378613 377539 NC_000014.9 velvet.61237 100.0 True fake: scaffold gap size wrong estimation (local) 46227909 46229480 381734 380163 NC_000014.9 velvet.61237 99.87 True fake: scaffold gap size wrong estimation (local) 46224927 46226063 385347 384211 NC_000014.9 velvet.61237 99.91 True fake: scaffold gap size wrong estimation (local) 46213178 46224041 399573 387201 NC_000014.9 velvet.61237 99.64 True fake: scaffold gap size wrong estimation (local) 46208283 46212998 405156 400435 NC_000014.9 velvet.61237 99.94 True fake: scaffold gap size wrong estimation (local) 46205469 46206428 408610 407651 NC_000014.9 velvet.61237 100.0 True fake: scaffold gap size wrong estimation (local) 46186528 46205245 429750 409645 NC_000014.9 velvet.61237 98.65 True fake: scaffold gap size wrong estimation (local) 46183448 46186410 433877 430709 NC_000014.9 velvet.61237 99.9 True fake: scaffold gap size wrong estimation (local) 46160254 46161122 452037 451169 NC_000014.9 velvet.61237 100.0 True relocation, scaffold gap is present, inconsistency = -18741 46177443 46178984 453568 452048 NC_000014.9 velvet.61237 98.5 True fake: scaffold gap size wrong estimation (local) 46172603 46177190 459223 454636 NC_000014.9 velvet.61237 99.91 True fake: scaffold gap size wrong estimation (local) 46167053 46172509 465632 459394 NC_000014.9 velvet.61237 99.83 True fake: scaffold gap size wrong estimation (local) 46158603 46159363 468056 467296 NC_000014.9 velvet.61237 99.87 True fake: scaffold gap size wrong estimation (local) 46153041 46157746 475012 468956 NC_000014.9 velvet.61237 99.85 True relocation, scaffold gap is present, inconsistency = -10542 46132833 46144022 505762 494573 NC_000014.9 velvet.61237 99.88 True relocation, scaffold gap is present, inconsistency = -19868 46144041 46149087 514482 509376 NC_000014.9 velvet.61237 99.94 True fake: scaffold gap size wrong estimation (extensive) 46104263 46107832 547180 542720 NC_000014.9 velvet.61237 99.94 True fake: scaffold gap size wrong estimation (local) 46101481 46104020 550072 547191 NC_000014.9 velvet.61237 99.96 True relocation, scaffold gap is present, inconsistency = -32655 46117639 46132796 566570 551412 NC_000014.9 velvet.61237 99.94 True fake: scaffold gap size wrong estimation (local) 46086287 46095409 594695 585567 NC_000014.9 velvet.61237 99.67 True CONTIG velvet.61237 594695 misassembled 78154116 78159517 6006 93 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 78134012 78153893 26990 6762 NC_000014.9 velvet.61247 99.95 True fake: scaffold gap size wrong estimation (extensive) 78093457 78094325 59508 58641 NC_000014.9 velvet.61247 99.88 True fake: scaffold gap size wrong estimation (local) 78087543 78093182 66021 60382 NC_000014.9 velvet.61247 99.77 True fake: scaffold gap size wrong estimation (local) 78083407 78087280 70982 67080 NC_000014.9 velvet.61247 98.39 True fake: scaffold gap size wrong estimation (local) 78080741 78082942 74449 72248 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 78077226 78080062 78777 75897 NC_000014.9 velvet.61247 99.79 True relocation, scaffold gap is present, inconsistency = 11863 78063977 78065352 78788 80163 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 78065353 78067080 81688 83415 NC_000014.9 velvet.61247 99.84 True local misassembly 78068802 78073996 83416 89686 NC_000014.9 velvet.61247 96.02 True fake: scaffold gap size wrong estimation (local) 78074282 78076440 90665 92825 NC_000014.9 velvet.61247 99.63 True fake: scaffold gap size wrong estimation (local) 78076565 78077254 93712 94394 NC_000014.9 velvet.61247 98.84 True relocation, scaffold gap is present, inconsistency = -29341 78057100 78057784 103581 104265 NC_000014.9 velvet.61247 98.54 True relocation, scaffold gap is present, inconsistency = 8298 78045541 78048791 107526 104276 NC_000014.9 velvet.61247 99.82 True relocation, scaffold gap is present, inconsistency = 19705197 97767567 97775070 121105 128608 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 97775204 97786482 129511 141054 NC_000014.9 velvet.61247 99.91 True relocation, scaffold gap is present, inconsistency = -19680647 78105846 78108903 141065 144168 NC_000014.9 velvet.61247 99.8 True relocation, scaffold gap is present, inconsistency = -55075714 23033200 23036131 144179 147200 NC_000014.9 velvet.61247 99.9 True fake: scaffold gap size wrong estimation (local) 23036717 23037318 148043 148644 NC_000014.9 velvet.61247 99.83 True relocation, scaffold gap is present, inconsistency = 55067306 78105043 78105814 149063 149834 NC_000014.9 velvet.61247 99.87 True relocation, scaffold gap is present, inconsistency = -12714608 65392233 65393860 150861 152488 NC_000014.9 velvet.61247 100.0 True fake: not a misassembly (possible transposable element) 78098464 78102405 152629 156570 NC_000014.9 velvet.61247 99.97 True fake: not a misassembly (possible transposable element) 65419293 65420900 174301 175896 NC_000014.9 velvet.61247 99.25 True fake: scaffold gap size wrong estimation (local) 65421780 65422892 177799 178905 NC_000014.9 velvet.61247 99.46 True relocation, scaffold gap is present, inconsistency = 10452640 75875543 75884851 188270 178916 NC_000014.9 velvet.61247 99.84 True fake: scaffold gap size wrong estimation (local) 75874361 75874932 190231 189660 NC_000014.9 velvet.61247 99.83 True fake: scaffold gap size wrong estimation (local) 75871550 75872724 193632 192458 NC_000014.9 velvet.61247 98.47 True fake: scaffold gap size wrong estimation (local) 75870090 75870781 194885 194194 NC_000014.9 velvet.61247 99.71 True fake: scaffold gap size wrong estimation (local) 75867761 75869817 197352 195291 NC_000014.9 velvet.61247 99.76 True fake: scaffold gap size wrong estimation (local) 75862888 75867479 203195 198477 NC_000014.9 velvet.61247 99.89 True fake: scaffold gap size wrong estimation (local) 75857911 75862678 208892 204120 NC_000014.9 velvet.61247 99.87 True fake: scaffold gap size wrong estimation (local) 75856894 75857668 210354 209584 NC_000014.9 velvet.61247 99.1 True fake: scaffold gap size wrong estimation (local) 75854038 75856079 213709 211675 NC_000014.9 velvet.61247 99.61 True fake: scaffold gap size wrong estimation (local) 75850964 75853768 217580 214737 NC_000014.9 velvet.61247 99.93 True fake: scaffold gap size wrong estimation (local) 75847272 75850000 222109 219347 NC_000014.9 velvet.61247 99.78 True fake: scaffold gap size wrong estimation (local) 75844140 75846506 225970 223604 NC_000014.9 velvet.61247 99.96 True fake: scaffold gap size wrong estimation (local) 75840473 75843856 230482 227099 NC_000014.9 velvet.61247 99.91 True fake: scaffold gap size wrong estimation (local) 75838563 75840250 232298 230611 NC_000014.9 velvet.61247 99.7 True fake: scaffold gap size wrong estimation (local) 75829561 75838270 242688 233420 NC_000014.9 velvet.61247 98.34 True relocation, scaffold gap is present, inconsistency = 9719506 85557787 85560326 242699 245238 NC_000014.9 velvet.61247 99.8 True fake: scaffold gap size wrong estimation (local) 85563719 85566575 245249 248105 NC_000014.9 velvet.61247 99.86 True local misassembly 85560774 85563066 248116 250471 NC_000014.9 velvet.61247 99.78 True relocation, scaffold gap is present, inconsistency = -32859995 52703082 52704312 250482 251712 NC_000014.9 velvet.61247 99.92 True fake: scaffold gap size wrong estimation (local) 52706305 52710179 254533 258407 NC_000014.9 velvet.61247 99.97 True fake: scaffold gap size wrong estimation (local) 52710426 52712808 259395 261777 NC_000014.9 velvet.61247 99.96 True fake: scaffold gap size wrong estimation (local) 52713215 52714284 263057 264126 NC_000014.9 velvet.61247 99.91 True fake: scaffold gap size wrong estimation (extensive) 52717805 52718534 275168 275897 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 52720402 52725671 278491 283822 NC_000014.9 velvet.61247 99.92 True fake: scaffold gap size wrong estimation (local) 52725801 52726666 284548 285413 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 52732964 52734788 287518 289342 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = -7466 52727333 52729070 289353 291090 NC_000014.9 velvet.61247 99.94 True fake: scaffold gap size wrong estimation (local) 52729333 52731454 292268 294389 NC_000014.9 velvet.61247 99.95 True fake: scaffold gap size wrong estimation (local) 52762172 52762880 318171 318879 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 52763127 52764022 319177 320072 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 39060946 91826350 91829071 321454 324175 NC_000014.9 velvet.61247 99.63 True local misassembly 91829072 91830664 325162 326754 NC_000014.9 velvet.61247 99.18 True fake: scaffold gap size wrong estimation (local) 91830665 91832147 327004 328486 NC_000014.9 velvet.61247 98.58 True fake: scaffold gap size wrong estimation (local) 91832420 91838163 329448 335356 NC_000014.9 velvet.61247 99.93 True relocation, scaffold gap is present, inconsistency = 34739041 57090987 57092187 337748 336548 NC_000014.9 velvet.61247 100.0 True local misassembly 57092472 57094824 340577 338227 NC_000014.9 velvet.61247 99.87 True fake: scaffold gap size wrong estimation (local) 57084491 57088664 344759 340589 NC_000014.9 velvet.61247 99.88 True fake: scaffold gap size wrong estimation (local) 57083349 57084225 346378 345502 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 57079435 57083145 350734 347024 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 57070363 57079345 360566 351584 NC_000014.9 velvet.61247 99.99 True relocation, scaffold gap is present, inconsistency = -16249497 73319219 73319849 361207 360577 NC_000014.9 velvet.61247 98.26 True fake: scaffold gap size wrong estimation (local) 73317524 73318646 362651 361529 NC_000014.9 velvet.61247 99.91 True fake: scaffold gap size wrong estimation (local) 73316139 73317333 364578 363384 NC_000014.9 velvet.61247 99.92 True fake: scaffold gap size wrong estimation (local) 73314018 73315893 367288 365413 NC_000014.9 velvet.61247 99.95 True relocation, scaffold gap is present, inconsistency = 16298105 57010669 57013691 372532 369510 NC_000014.9 velvet.61247 99.83 True relocation, scaffold gap is present, inconsistency = 41652 56952763 56969006 372543 389572 NC_000014.9 velvet.61247 99.89 True fake: scaffold gap size wrong estimation (local) 56969596 56971250 391004 392659 NC_000014.9 velvet.61247 99.88 True fake: scaffold gap size wrong estimation (local) 56971747 56972698 393915 394866 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 56972956 56974290 395138 396472 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 56974470 56976623 397322 399543 NC_000014.9 velvet.61247 97.06 True fake: scaffold gap size wrong estimation (local) 56979546 56987071 399694 407217 NC_000014.9 velvet.61247 99.83 True fake: scaffold gap size wrong estimation (local) 56992251 56996142 410838 414728 NC_000014.9 velvet.61247 99.82 True fake: scaffold gap size wrong estimation (local) 57025199 57025933 444586 445320 NC_000014.9 velvet.61247 99.18 True fake: scaffold gap size wrong estimation (local) 57027476 57028432 447509 448450 NC_000014.9 velvet.61247 98.2 True relocation, scaffold gap is present, inconsistency = -33916718 23111850 23122580 448586 459516 NC_000014.9 velvet.61247 99.58 True fake: scaffold gap size wrong estimation (local) 23122851 23124723 460585 462457 NC_000014.9 velvet.61247 99.89 True fake: scaffold gap size wrong estimation (local) 23124902 23127727 462909 465734 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 23134468 23135133 465745 466404 NC_000014.9 velvet.61247 99.1 True relocation, scaffold gap is present, inconsistency = 62556824 85692862 85697743 472188 467309 NC_000014.9 velvet.61247 99.9 True fake: scaffold gap size wrong estimation (local) 85677027 85679139 485472 482767 NC_000014.9 velvet.61247 99.28 True fake: scaffold gap size wrong estimation (local) 85672169 85676734 491115 485992 NC_000014.9 velvet.61247 99.78 True fake: scaffold gap size wrong estimation (local) 85660269 85672015 503654 491813 NC_000014.9 velvet.61247 99.86 True fake: scaffold gap size wrong estimation (local) 85657651 85660036 507045 504660 NC_000014.9 velvet.61247 99.87 True relocation, scaffold gap is present, inconsistency = 62477077 23175482 23176657 512137 510962 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = -8167 23180197 23180814 515589 514972 NC_000014.9 velvet.61247 100.0 True fake: not a misassembly (possible transposable element) 23173920 23175304 515613 516997 NC_000014.9 velvet.61247 100.0 True fake: not a misassembly (possible transposable element) 23170709 23173655 520074 517129 NC_000014.9 velvet.61247 99.9 True inversion, scaffold gap is present 23176969 23178617 520085 521733 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 23178914 23179922 521823 523548 NC_000014.9 velvet.61247 99.9 True fake: scaffold gap size wrong estimation (local) 23181030 23185842 525063 530254 NC_000014.9 velvet.61247 99.48 True relocation, scaffold gap is present, inconsistency = 62466670 85652523 85656179 533921 530265 NC_000014.9 velvet.61247 99.81 True fake: scaffold gap size wrong estimation (local) 85628337 85630277 553519 551579 NC_000014.9 velvet.61247 99.79 True local misassembly 85623712 85628336 560985 556361 NC_000014.9 velvet.61247 99.5 True fake: scaffold gap size wrong estimation (local) 85619288 85623711 565700 561277 NC_000014.9 velvet.61247 98.62 True fake: scaffold gap size wrong estimation (local) 85616323 85619071 569026 566278 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 52072340 33523782 33543972 569037 589336 NC_000014.9 velvet.61247 99.97 True relocation, scaffold gap is present, inconsistency = -22439 33521544 33523414 589347 591217 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 13759391 47282824 47286775 595861 591236 NC_000014.9 velvet.61247 99.77 True fake: scaffold gap size wrong estimation (local) 47280323 47281774 599020 597569 NC_000014.9 velvet.61247 99.86 True fake: scaffold gap size wrong estimation (local) 47268948 47280071 612205 600079 NC_000014.9 velvet.61247 99.82 True relocation, scaffold gap is present, inconsistency = 13719634 33544016 33549303 612216 617617 NC_000014.9 velvet.61247 99.81 True relocation, scaffold gap is present, inconsistency = 31473554 65024884 65025563 620323 619644 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 17777479 47245155 47246796 622573 620932 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 47243779 47244979 624734 623534 NC_000014.9 velvet.61247 99.92 True fake: scaffold gap size wrong estimation (local) 47240310 47242338 628978 626950 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 47236291 47240055 633776 630012 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 47226237 47236030 644641 634848 NC_000014.9 velvet.61247 99.95 True relocation, scaffold gap is present, inconsistency = -17804695 65025743 65030921 650789 644652 NC_000014.9 velvet.61247 99.98 True relocation, scaffold gap is present, inconsistency = 31468016 33549487 33557716 650800 659028 NC_000014.9 velvet.61247 99.79 True relocation, scaffold gap is present, inconsistency = 52020515 85578242 85579948 659039 660745 NC_000014.9 velvet.61247 99.65 True fake: scaffold gap size wrong estimation (local) 85586732 85587965 670130 671411 NC_000014.9 velvet.61247 99.75 True fake: scaffold gap size wrong estimation (local) 85588566 85589992 672881 674319 NC_000014.9 velvet.61247 99.72 True relocation, scaffold gap is present, inconsistency = 38393809 47193103 47194746 675973 674330 NC_000014.9 velvet.61247 99.88 True local misassembly 47194769 47197646 680335 677405 NC_000014.9 velvet.61247 97.85 True relocation, scaffold gap is present, inconsistency = -43022 47206859 47210746 712113 707380 NC_000014.9 velvet.61247 99.97 True fake: not a misassembly (possible transposable element) 42492285 42492899 713526 712912 NC_000014.9 velvet.61247 100.0 True fake: not a misassembly (possible transposable element) 47198555 47206606 722410 713537 NC_000014.9 velvet.61247 99.98 True fake: scaffold gap size wrong estimation (local) 47168283 47171657 752259 748885 NC_000014.9 velvet.61247 99.85 True local misassembly 47163653 47164351 752958 752260 NC_000014.9 velvet.61247 98.28 True fake: scaffold gap size wrong estimation (local) 47162205 47163584 754411 753032 NC_000014.9 velvet.61247 99.28 True fake: scaffold gap size wrong estimation (local) 47158714 47161923 757815 754618 NC_000014.9 velvet.61247 99.28 True fake: scaffold gap size wrong estimation (local) 47130999 47136183 787668 781736 NC_000014.9 velvet.61247 99.98 True fake: scaffold gap size wrong estimation (local) 47089716 47104196 831512 815248 NC_000014.9 velvet.61247 99.78 True fake: scaffold gap size wrong estimation (local) 47087464 47089400 833857 831922 NC_000014.9 velvet.61247 99.9 True fake: scaffold gap size wrong estimation (local) 47086077 47087230 835768 834615 NC_000014.9 velvet.61247 97.83 True fake: scaffold gap size wrong estimation (local) 47084489 47085598 837783 836674 NC_000014.9 velvet.61247 99.1 True fake: scaffold gap size wrong estimation (local) 47082317 47084488 843259 841088 NC_000014.9 velvet.61247 98.99 True fake: scaffold gap size wrong estimation (local) 47080005 47082316 845674 843363 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 47074574 47079716 851856 846714 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 47070873 47074285 856340 852873 NC_000014.9 velvet.61247 99.97 True fake: scaffold gap size wrong estimation (local) 47067082 47070630 860770 857351 NC_000014.9 velvet.61247 96.3 True fake: scaffold gap size wrong estimation (local) 47055003 47066924 874463 861711 NC_000014.9 velvet.61247 99.95 True fake: scaffold gap size wrong estimation (local) 47046607 47054320 884882 875921 NC_000014.9 velvet.61247 99.91 True fake: scaffold gap size wrong estimation (local) 47038951 47045698 893380 886397 NC_000014.9 velvet.61247 99.99 True fake: scaffold gap size wrong estimation (local) 47036987 47037935 895995 895047 NC_000014.9 velvet.61247 96.73 True fake: scaffold gap size wrong estimation (local) 47036272 47036986 896814 896100 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 47033335 47035992 900517 897787 NC_000014.9 velvet.61247 96.32 True fake: scaffold gap size wrong estimation (local) 47031232 47032341 903266 902173 NC_000014.9 velvet.61247 98.47 True fake: scaffold gap size wrong estimation (local) 47019842 47030257 917081 904954 NC_000014.9 velvet.61247 99.82 True fake: scaffold gap size wrong estimation (local) 47014054 47019559 923479 917092 NC_000014.9 velvet.61247 99.04 True fake: scaffold gap size wrong estimation (local) 47002705 47013561 935794 923961 NC_000014.9 velvet.61247 99.9 True fake: scaffold gap size wrong estimation (local) 47000401 47002440 938613 936574 NC_000014.9 velvet.61247 99.95 True fake: scaffold gap size wrong estimation (local) 46993667 47000304 946098 939465 NC_000014.9 velvet.61247 99.85 True fake: scaffold gap size wrong estimation (local) 46983087 46993576 957653 947091 NC_000014.9 velvet.61247 99.89 True fake: scaffold gap size wrong estimation (local) 46981374 46982412 960097 959059 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 46973977 46981119 968063 960919 NC_000014.9 velvet.61247 99.8 True fake: scaffold gap size wrong estimation (local) 46969960 46973884 972894 968931 NC_000014.9 velvet.61247 98.81 True fake: scaffold gap size wrong estimation (local) 46965195 46968551 978331 974975 NC_000014.9 velvet.61247 99.88 True fake: scaffold gap size wrong estimation (local) 46961909 46964912 982431 979428 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 46960169 46961643 984876 983402 NC_000014.9 velvet.61247 99.86 True fake: scaffold gap size wrong estimation (local) 46947693 46959944 998484 985486 NC_000014.9 velvet.61247 99.85 True fake: scaffold gap size wrong estimation (local) 46940436 46947465 1006626 999546 NC_000014.9 velvet.61247 99.91 True fake: scaffold gap size wrong estimation (local) 46938541 46940341 1009241 1007436 NC_000014.9 velvet.61247 99.5 True fake: scaffold gap size wrong estimation (local) 46933876 46938189 1014300 1009981 NC_000014.9 velvet.61247 99.51 True fake: scaffold gap size wrong estimation (local) 46932166 46933777 1016743 1015132 NC_000014.9 velvet.61247 99.88 True fake: scaffold gap size wrong estimation (local) 46929865 46931041 1019581 1018405 NC_000014.9 velvet.61247 99.49 True fake: scaffold gap size wrong estimation (local) 46925633 46929571 1025120 1020567 NC_000014.9 velvet.61247 99.87 True fake: scaffold gap size wrong estimation (local) 46919035 46925348 1032175 1025726 NC_000014.9 velvet.61247 99.92 True fake: scaffold gap size wrong estimation (local) 46907144 46918282 1044847 1033709 NC_000014.9 velvet.61247 99.79 True local misassembly 46901323 46904077 1047602 1044848 NC_000014.9 velvet.61247 99.82 True fake: scaffold gap size wrong estimation (local) 46895735 46901150 1053960 1048568 NC_000014.9 velvet.61247 98.84 True fake: scaffold gap size wrong estimation (local) 46885115 46895443 1065305 1054979 NC_000014.9 velvet.61247 99.86 True fake: scaffold gap size wrong estimation (local) 46880804 46884998 1070442 1066190 NC_000014.9 velvet.61247 99.95 True fake: scaffold gap size wrong estimation (local) 46867528 46880200 1084613 1071881 NC_000014.9 velvet.61247 99.88 True fake: scaffold gap size wrong estimation (local) 46864052 46865285 1089645 1087503 NC_000014.9 velvet.61247 99.75 True fake: scaffold gap size wrong estimation (local) 46858702 46863970 1095070 1089805 NC_000014.9 velvet.61247 99.91 True fake: scaffold gap size wrong estimation (local) 46845165 46857725 1109553 1096876 NC_000014.9 velvet.61247 99.81 True fake: scaffold gap size wrong estimation (local) 46833158 46844293 1123333 1111341 NC_000014.9 velvet.61247 99.91 True fake: scaffold gap size wrong estimation (local) 46820667 46832545 1137273 1124739 NC_000014.9 velvet.61247 99.92 True fake: scaffold gap size wrong estimation (local) 46808798 46820325 1150126 1138110 NC_000014.9 velvet.61247 99.86 True fake: scaffold gap size wrong estimation (local) 46795495 46808681 1165814 1151035 NC_000014.9 velvet.61247 99.26 True relocation, scaffold gap is present, inconsistency = 18100404 64909291 64910550 1166020 1167279 NC_000014.9 velvet.61247 99.92 True relocation, scaffold gap is present, inconsistency = 18122887 46765452 46786208 1188591 1167475 NC_000014.9 velvet.61247 99.88 True fake: scaffold gap size wrong estimation (local) 46762217 46763604 1192488 1191102 NC_000014.9 velvet.61247 99.93 True relocation, scaffold gap is present, inconsistency = -33752 46792745 46795163 1195712 1193294 NC_000014.9 velvet.61247 99.92 True fake: scaffold gap size wrong estimation (local) 46788883 46792590 1200351 1196636 NC_000014.9 velvet.61247 99.65 True fake: not a misassembly (possible transposable element) 64905382 64906498 1200362 1201478 NC_000014.9 velvet.61247 99.82 True fake: not a misassembly (possible transposable element) 46787972 46788617 1202134 1201489 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 7780 46753865 46757153 1225173 1228461 NC_000014.9 velvet.61247 99.97 True indel: indel (> 5bp) 46757197 46761821 1228546 1233322 NC_000014.9 velvet.61247 97.75 True relocation, scaffold gap is present, inconsistency = 52478171 99241050 99249332 1234380 1242848 NC_000014.9 velvet.61247 99.89 True fake: not a misassembly (possible transposable element) 46751089 46753616 1245386 1242859 NC_000014.9 velvet.61247 99.96 True fake: not a misassembly (possible transposable element) 99250448 99255431 1245397 1250478 NC_000014.9 velvet.61247 99.86 True relocation, scaffold gap is present, inconsistency = 52499919 46736180 46750518 1265685 1250489 NC_000014.9 velvet.61247 98.84 True fake: scaffold gap size wrong estimation (local) 46711782 46721407 1286845 1277220 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 46710286 46711498 1289037 1287825 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 46701755 46709998 1298274 1289832 NC_000014.9 velvet.61247 99.94 True fake: scaffold gap size wrong estimation (local) 46685868 46701265 1315666 1299424 NC_000014.9 velvet.61247 99.92 True fake: scaffold gap size wrong estimation (local) 46679475 46685745 1323350 1315923 NC_000014.9 velvet.61247 95.41 True fake: scaffold gap size wrong estimation (local) 46652309 46677394 1352388 1325987 NC_000014.9 velvet.61247 99.62 True fake: scaffold gap size wrong estimation (local) 46648951 46652132 1356504 1353323 NC_000014.9 velvet.61247 99.94 True fake: scaffold gap size wrong estimation (local) 46640741 46648661 1364978 1357324 NC_000014.9 velvet.61247 96.45 True fake: scaffold gap size wrong estimation (local) 46630578 46640353 1376911 1366147 NC_000014.9 velvet.61247 98.46 True fake: scaffold gap size wrong estimation (local) 46622393 46630470 1386885 1377738 NC_000014.9 velvet.61247 99.49 True fake: scaffold gap size wrong estimation (local) 46619479 46620570 1390775 1389684 NC_000014.9 velvet.61247 99.82 True fake: scaffold gap size wrong estimation (local) 46618394 46619321 1393036 1392109 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 46616735 46617655 1394812 1393899 NC_000014.9 velvet.61247 99.02 True fake: scaffold gap size wrong estimation (local) 46615874 46616653 1396131 1395352 NC_000014.9 velvet.61247 99.87 True fake: scaffold gap size wrong estimation (local) 46609379 46615354 1403044 1397080 NC_000014.9 velvet.61247 99.75 True relocation, scaffold gap is present, inconsistency = 46034076 92649517 92653785 1403131 1407393 NC_000014.9 velvet.61247 99.74 True fake: scaffold gap size wrong estimation (local) 92654346 92654915 1408260 1408829 NC_000014.9 velvet.61247 99.65 True relocation, scaffold gap is present, inconsistency = 46041804 46594633 46605621 1426721 1415750 NC_000014.9 velvet.61247 99.7 True fake: scaffold gap size wrong estimation (local) 46591850 46594357 1430251 1427744 NC_000014.9 velvet.61247 99.92 True fake: scaffold gap size wrong estimation (local) 46589034 46591206 1433795 1431623 NC_000014.9 velvet.61247 99.95 True fake: scaffold gap size wrong estimation (local) 46586917 46588289 1436810 1435438 NC_000014.9 velvet.61247 97.16 True relocation, scaffold gap is present, inconsistency = 17205 46605921 46606687 1437237 1438003 NC_000014.9 velvet.61247 99.87 True fake: scaffold gap size wrong estimation (local) 46606836 46608792 1438320 1440276 NC_000014.9 velvet.61247 99.95 True relocation, scaffold gap is present, inconsistency = 20089 46584259 46585298 1442801 1441725 NC_000014.9 velvet.61247 99.8 True relocation, scaffold gap is present, inconsistency = 21584835 68172011 68183367 1444679 1456239 NC_000014.9 velvet.61247 99.89 True relocation, scaffold gap is present, inconsistency = 24436367 92621236 92621857 1458362 1457741 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 92582741 92585102 1492819 1490462 NC_000014.9 velvet.61247 99.7 True relocation, scaffold gap is present, inconsistency = -9391 92588540 92592121 1496484 1492830 NC_000014.9 velvet.61247 99.91 True relocation, scaffold gap is present, inconsistency = 24542398 68045247 68046131 1497379 1496495 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 68041566 68044954 1501563 1498175 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 68039425 68041279 1504411 1502558 NC_000014.9 velvet.61247 99.84 True fake: scaffold gap size wrong estimation (local) 68037497 68039156 1507161 1505502 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 68005782 68014183 1537377 1528976 NC_000014.9 velvet.61247 99.99 True fake: scaffold gap size wrong estimation (local) 68004333 68005030 1539068 1538371 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 19279107 87284716 87285284 1539647 1540215 NC_000014.9 velvet.61247 99.65 True relocation, scaffold gap is present, inconsistency = 2750471 90035766 90038585 1540226 1543302 NC_000014.9 velvet.61247 100.0 True fake: not a misassembly (possible transposable element) 67996430 67998532 1545415 1543313 NC_000014.9 velvet.61247 100.0 True fake: not a misassembly (possible transposable element) 90042858 90046585 1545426 1549203 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 90046804 90050062 1550050 1553583 NC_000014.9 velvet.61247 97.92 True relocation, scaffold gap is present, inconsistency = 2762340 87283543 87284453 1554504 1553594 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 87279238 87283242 1559404 1555338 NC_000014.9 velvet.61247 99.95 True fake: scaffold gap size wrong estimation (local) 87277248 87277795 1562319 1561772 NC_000014.9 velvet.61247 99.27 True relocation, scaffold gap is present, inconsistency = 53262093 34012925 34014392 1564549 1563082 NC_000014.9 velvet.61247 99.11 True fake: scaffold gap size wrong estimation (local) 34009474 34012177 1568933 1566126 NC_000014.9 velvet.61247 97.2 True relocation, scaffold gap is present, inconsistency = 34010901 68023745 68024363 1569600 1570212 NC_000014.9 velvet.61247 99.03 True fake: scaffold gap size wrong estimation (local) 68024628 68030188 1570827 1576430 NC_000014.9 velvet.61247 99.89 True fake: not a misassembly (possible transposable element) 90007865 90011178 1579782 1576441 NC_000014.9 velvet.61247 99.04 True fake: not a misassembly (possible transposable element) 68031421 68034276 1579793 1582648 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 34022583 34004676 34008581 1586810 1582905 NC_000014.9 velvet.61247 99.85 True fake: scaffold gap size wrong estimation (local) 33993653 33999211 1594232 1588550 NC_000014.9 velvet.61247 99.71 True fake: scaffold gap size wrong estimation (local) 33986333 33993567 1603081 1595010 NC_000014.9 velvet.61247 99.86 True fake: scaffold gap size wrong estimation (local) 33985065 33986039 1605246 1604272 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 33982576 33983382 1608628 1607823 NC_000014.9 velvet.61247 99.5 True fake: scaffold gap size wrong estimation (local) 33981642 33982305 1609486 1608823 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 34064125 68046740 68048216 1609796 1611272 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 68049361 68052638 1613212 1617072 NC_000014.9 velvet.61247 98.27 True fake: scaffold gap size wrong estimation (local) 68052887 68056269 1617841 1621223 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 68061588 68062132 1623426 1623970 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 68062864 68063482 1624789 1625407 NC_000014.9 velvet.61247 99.84 True fake: scaffold gap size wrong estimation (local) 68063709 68067210 1626465 1629966 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 19194109 87261330 87268161 1636808 1629977 NC_000014.9 velvet.61247 99.78 True fake: scaffold gap size wrong estimation (local) 87258820 87261200 1640214 1637849 NC_000014.9 velvet.61247 99.11 True fake: scaffold gap size wrong estimation (local) 87254262 87258530 1645392 1641070 NC_000014.9 velvet.61247 98.89 True fake: scaffold gap size wrong estimation (local) 87250853 87254136 1649652 1646274 NC_000014.9 velvet.61247 99.72 True fake: scaffold gap size wrong estimation (local) 87243306 87249265 1659174 1652153 NC_000014.9 velvet.61247 99.49 True fake: scaffold gap size wrong estimation (local) 87240476 87243190 1662823 1660109 NC_000014.9 velvet.61247 99.41 True inversion, scaffold gap is present 87230245 87234227 1670706 1674669 NC_000014.9 velvet.61247 98.0 True relocation, scaffold gap is present, inconsistency = 19092260 68133746 68136289 1678908 1676365 NC_000014.9 velvet.61247 99.92 True fake: scaffold gap size wrong estimation (local) 68131681 68133495 1681666 1679852 NC_000014.9 velvet.61247 99.83 True fake: scaffold gap size wrong estimation (local) 68128671 68131446 1685368 1682593 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 68124935 68128451 1689963 1686397 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 68123790 68124659 1691705 1690836 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 41055 68078303 68081977 1692463 1696137 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 68082255 68085810 1697250 1700805 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 68086057 68086905 1701866 1702714 NC_000014.9 velvet.61247 99.65 True fake: scaffold gap size wrong estimation (local) 68087167 68087837 1702952 1703622 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 68088058 68090716 1703757 1706371 NC_000014.9 velvet.61247 98.35 True fake: not a misassembly (possible transposable element) 68098725 68101646 1714915 1711965 NC_000014.9 velvet.61247 98.54 True fake: not a misassembly (possible transposable element) 68102263 68114906 1715976 1728699 NC_000014.9 velvet.61247 99.64 True fake: scaffold gap size wrong estimation (local) 68115563 68119332 1730100 1733982 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 68120359 68123200 1735740 1738581 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 68137246 68146202 1748085 1757944 NC_000014.9 velvet.61247 99.93 True fake: scaffold gap size wrong estimation (local) 68146419 68149977 1758869 1762491 NC_000014.9 velvet.61247 99.86 True fake: scaffold gap size wrong estimation (local) 68150220 68151847 1763440 1765064 NC_000014.9 velvet.61247 99.75 True fake: scaffold gap size wrong estimation (local) 68157081 68159368 1765075 1767362 NC_000014.9 velvet.61247 99.78 True fake: scaffold gap size wrong estimation (local) 68159651 68162590 1768386 1771326 NC_000014.9 velvet.61247 99.83 True fake: scaffold gap size wrong estimation (local) 68162823 68171317 1772307 1780876 NC_000014.9 velvet.61247 99.86 True relocation, scaffold gap is present, inconsistency = -18206 68153122 68154706 1780887 1782471 NC_000014.9 velvet.61247 99.56 True fake: scaffold gap size wrong estimation (local) 68155498 68156950 1784308 1785748 NC_000014.9 velvet.61247 99.11 True fake: scaffold gap size wrong estimation (local) 68184655 68185869 1815005 1816219 NC_000014.9 velvet.61247 99.92 True fake: scaffold gap size wrong estimation (local) 68188277 68189716 1822415 1823854 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 68189855 68195664 1824770 1830615 NC_000014.9 velvet.61247 99.86 True fake: scaffold gap size wrong estimation (local) 68196222 68200699 1831917 1836394 NC_000014.9 velvet.61247 99.91 True fake: scaffold gap size wrong estimation (local) 68207092 68209975 1837877 1840759 NC_000014.9 velvet.61247 99.93 True fake: scaffold gap size wrong estimation (local) 68210264 68220347 1841846 1851929 NC_000014.9 velvet.61247 99.99 True fake: scaffold gap size wrong estimation (local) 68221677 68224736 1853972 1857012 NC_000014.9 velvet.61247 99.38 True fake: scaffold gap size wrong estimation (local) 68224992 68235129 1857824 1868052 NC_000014.9 velvet.61247 98.95 True relocation, scaffold gap is present, inconsistency = 24237744 92472884 92474528 1868063 1869707 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = -11841 92462698 92468885 1869718 1875905 NC_000014.9 velvet.61247 99.53 True fake: scaffold gap size wrong estimation (local) 92469540 92472425 1877237 1880122 NC_000014.9 velvet.61247 99.31 True relocation, scaffold gap is present, inconsistency = -24230968 68241547 68252849 1880212 1891514 NC_000014.9 velvet.61247 99.97 True fake: scaffold gap size wrong estimation (local) 68253112 68258172 1892570 1897630 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 68260325 68265495 1900372 1905542 NC_000014.9 velvet.61247 99.98 True fake: scaffold gap size wrong estimation (local) 68265764 68272656 1906602 1913494 NC_000014.9 velvet.61247 99.96 True fake: scaffold gap size wrong estimation (local) 68272987 68275819 1914647 1917479 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 146730 68422560 68424809 1919739 1917490 NC_000014.9 velvet.61247 99.91 True relocation, scaffold gap is present, inconsistency = 215854 68202878 68206688 1919757 1923567 NC_000014.9 velvet.61247 99.9 True relocation, scaffold gap is present, inconsistency = 24335313 92565536 92569564 1951224 1947102 NC_000014.9 velvet.61247 99.88 True fake: scaffold gap size wrong estimation (local) 92561957 92563096 1954321 1953182 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 92558243 92558865 1955229 1954607 NC_000014.9 velvet.61247 99.84 True relocation, scaffold gap is present, inconsistency = 80706 92475002 92476471 1956293 1957762 NC_000014.9 velvet.61247 99.18 True fake: not a misassembly (possible transposable element) 68235792 68237692 1957763 1959686 NC_000014.9 velvet.61247 98.8 True fake: not a misassembly (possible transposable element) 92476474 92477550 1959688 1960764 NC_000014.9 velvet.61247 99.16 True fake: scaffold gap size wrong estimation (local) 92483738 92485211 1961211 1962684 NC_000014.9 velvet.61247 99.86 True relocation, scaffold gap is present, inconsistency = -7119 92478103 92478648 1962695 1963240 NC_000014.9 velvet.61247 99.63 True fake: not a misassembly (possible transposable element) 68238405 68241293 1963265 1966153 NC_000014.9 velvet.61247 99.97 True fake: not a misassembly (possible transposable element) 92478680 92480153 1966164 1967637 NC_000014.9 velvet.61247 99.59 True fake: scaffold gap size wrong estimation (local) 92480596 92483610 1968893 1971905 NC_000014.9 velvet.61247 99.47 True fake: scaffold gap size wrong estimation (local) 92489421 92496863 1971916 1979562 NC_000014.9 velvet.61247 99.86 True relocation, scaffold gap is present, inconsistency = -11177 92485697 92488109 1979573 1981985 NC_000014.9 velvet.61247 99.92 True fake: scaffold gap size wrong estimation (extensive) 92497104 92498513 1981996 1983405 NC_000014.9 velvet.61247 99.86 True relocation, scaffold gap is present, inconsistency = -10011 92488571 92489163 1983474 1984066 NC_000014.9 velvet.61247 99.83 True relocation, scaffold gap is present, inconsistency = -24230940 68258234 68259261 1984077 1985082 NC_000014.9 velvet.61247 97.74 True fake: scaffold gap size wrong estimation (local) 68259472 68260319 1985920 1986767 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 24238468 92498802 92499574 1986782 1987554 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 92500109 92503431 1988779 1992100 NC_000014.9 velvet.61247 99.91 True fake: scaffold gap size wrong estimation (extensive) 92510618 92512718 1992125 1994225 NC_000014.9 velvet.61247 99.95 True relocation, scaffold gap is present, inconsistency = 19455 92532184 92533296 1995348 1994236 NC_000014.9 velvet.61247 99.82 True fake: not a misassembly (possible transposable element) 92503722 92510323 1995359 2001933 NC_000014.9 velvet.61247 99.42 True fake: not a misassembly (possible transposable element) 92529522 92531914 2004336 2001944 NC_000014.9 velvet.61247 99.92 True fake: scaffold gap size wrong estimation (local) 92527326 92529235 2007370 2005461 NC_000014.9 velvet.61247 99.9 True inversion, scaffold gap is present 92512744 92523164 2008117 2018530 NC_000014.9 velvet.61247 99.89 True fake: scaffold gap size wrong estimation (local) 92523414 92526212 2019579 2022329 NC_000014.9 velvet.61247 98.24 True relocation, scaffold gap is present, inconsistency = -24227108 68307042 68308723 2030267 2031948 NC_000014.9 velvet.61247 99.94 True relocation, scaffold gap is present, inconsistency = 2105575 70414313 70415068 2032718 2031963 NC_000014.9 velvet.61247 99.6 True fake: scaffold gap size wrong estimation (local) 70407448 70408085 2033365 2032729 NC_000014.9 velvet.61247 99.84 True fake: not a misassembly (possible transposable element) 98086743 98089117 2033376 2035750 NC_000014.9 velvet.61247 100.0 True fake: not a misassembly (possible transposable element) 70405058 70406296 2037035 2035797 NC_000014.9 velvet.61247 99.03 True local misassembly 70404177 70404856 2037715 2037036 NC_000014.9 velvet.61247 99.85 True relocation, scaffold gap is present, inconsistency = -10144 70412594 70413355 2039442 2038681 NC_000014.9 velvet.61247 99.74 True fake: not a misassembly (possible transposable element) 37447071 37449780 2042162 2039453 NC_000014.9 velvet.61247 100.0 True fake: not a misassembly (possible transposable element) 70410901 70412457 2043729 2042173 NC_000014.9 velvet.61247 99.87 True relocation, scaffold gap is present, inconsistency = 2292903 72705371 72706851 2043740 2045220 NC_000014.9 velvet.61247 99.93 True relocation, scaffold gap is present, inconsistency = 34186263 38517371 38518064 2046957 2046264 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 59574081 98092156 98096017 2046968 2050829 NC_000014.9 velvet.61247 99.97 True relocation, scaffold gap is present, inconsistency = -309514 97786514 97787462 2050840 2051788 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 29412978 68371838 68373379 2053486 2051945 NC_000014.9 velvet.61247 99.87 True relocation, scaffold gap is present, inconsistency = 1465851 66904198 66905976 2055275 2053497 NC_000014.9 velvet.61247 99.94 True relocation, scaffold gap is present, inconsistency = -3481577 70369369 70371419 2071681 2069631 NC_000014.9 velvet.61247 99.95 True relocation, scaffold gap is present, inconsistency = -13201 70380663 70381951 2073588 2072300 NC_000014.9 velvet.61247 99.69 True relocation, scaffold gap is present, inconsistency = 22151450 92533480 92534324 2073667 2074507 NC_000014.9 velvet.61247 99.05 True fake: scaffold gap size wrong estimation (local) 92534618 92535340 2074623 2075345 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 92535889 92536499 2077154 2077764 NC_000014.9 velvet.61247 98.2 True fake: scaffold gap size wrong estimation (local) 92538270 92542111 2080308 2084151 NC_000014.9 velvet.61247 99.64 True fake: scaffold gap size wrong estimation (local) 92542299 92543642 2085002 2086345 NC_000014.9 velvet.61247 99.85 True fake: scaffold gap size wrong estimation (local) 92543799 92545125 2086714 2088076 NC_000014.9 velvet.61247 99.32 True fake: scaffold gap size wrong estimation (local) 92546225 92547096 2089800 2090671 NC_000014.9 velvet.61247 100.0 True fake: not a misassembly (possible transposable element) 92563661 92565557 2091548 2093444 NC_000014.9 velvet.61247 99.79 True fake: not a misassembly (possible transposable element) 92548005 92550504 2093455 2096045 NC_000014.9 velvet.61247 99.96 True fake: not a misassembly (possible transposable element) 92561173 92561760 2096056 2096634 NC_000014.9 velvet.61247 97.92 True fake: not a misassembly (possible transposable element) 92550543 92554715 2096645 2100816 NC_000014.9 velvet.61247 99.98 True fake: scaffold gap size wrong estimation (local) 92554953 92558098 2101587 2105049 NC_000014.9 velvet.61247 99.94 True relocation, scaffold gap is present, inconsistency = -996225 91565091 91565792 2108267 2108968 NC_000014.9 velvet.61247 99.86 True fake: scaffold gap size wrong estimation (local) 91566402 91567157 2109207 2109962 NC_000014.9 velvet.61247 99.74 True relocation, scaffold gap is present, inconsistency = 1002357 92569615 92570339 2110063 2110787 NC_000014.9 velvet.61247 99.86 True fake: scaffold gap size wrong estimation (extensive) 92578266 92578950 2110798 2111482 NC_000014.9 velvet.61247 99.71 True fake: scaffold gap size wrong estimation (local) 92579267 92580121 2111673 2112527 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = -9440 92570692 92572894 2112538 2114740 NC_000014.9 velvet.61247 99.95 True fake: scaffold gap size wrong estimation (extensive) 92580376 92582440 2114813 2116877 NC_000014.9 velvet.61247 99.85 True relocation, scaffold gap is present, inconsistency = -9266 92573503 92575905 2117206 2119608 NC_000014.9 velvet.61247 99.83 True fake: scaffold gap size wrong estimation (local) 92575906 92578135 2120881 2123110 NC_000014.9 velvet.61247 99.51 True relocation, scaffold gap is present, inconsistency = -50544749 42055262 42059992 2144986 2150299 NC_000014.9 velvet.61247 99.72 True fake: scaffold gap size wrong estimation (local) 42060381 42062541 2151233 2153393 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 42062825 42063938 2154489 2155602 NC_000014.9 velvet.61247 99.91 True fake: scaffold gap size wrong estimation (local) 42064140 42066887 2155852 2159221 NC_000014.9 velvet.61247 99.4 True relocation, scaffold gap is present, inconsistency = 50541833 92609317 92609867 2159818 2160368 NC_000014.9 velvet.61247 98.19 True relocation, scaffold gap is present, inconsistency = -1020068 91599866 91600440 2170435 2171009 NC_000014.9 velvet.61247 99.83 True fake: scaffold gap size wrong estimation (local) 91600485 91603901 2174725 2178141 NC_000014.9 velvet.61247 99.91 True fake: not a misassembly (possible transposable element) 92612153 92614532 2178142 2180521 NC_000014.9 velvet.61247 99.87 True fake: not a misassembly (possible transposable element) 91604181 91605923 2180532 2182274 NC_000014.9 velvet.61247 99.83 True fake: scaffold gap size wrong estimation (local) 91606552 91607083 2184072 2184624 NC_000014.9 velvet.61247 95.66 True relocation, scaffold gap is present, inconsistency = 1007809 92615141 92616619 2184873 2186351 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 92617687 92618258 2188370 2188941 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = -3994526 88624367 88625429 2189576 2190638 NC_000014.9 velvet.61247 98.97 True fake: scaffold gap size wrong estimation (local) 88625705 88626630 2192307 2193232 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 88657968 88659279 2222031 2223342 NC_000014.9 velvet.61247 100.0 True local misassembly 88659498 88660274 2223343 2224119 NC_000014.9 velvet.61247 98.58 True relocation, scaffold gap is present, inconsistency = -19808 88640477 88644739 2224130 2228392 NC_000014.9 velvet.61247 99.95 True fake: scaffold gap size wrong estimation (local) 88645335 88647133 2229817 2231615 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 88648648 88650195 2233884 2235431 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 44446710 44200234 44201174 2237129 2236195 NC_000014.9 velvet.61247 99.26 True fake: scaffold gap size wrong estimation (local) 44198763 44200082 2238662 2237343 NC_000014.9 velvet.61247 99.77 True relocation, scaffold gap is present, inconsistency = 22890074 21307352 21308678 2238673 2239999 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 67357840 88666529 88670062 2240010 2243543 NC_000014.9 velvet.61247 99.94 True relocation, scaffold gap is present, inconsistency = -15839 88660848 88662297 2250168 2251606 NC_000014.9 velvet.61247 99.24 True fake: scaffold gap size wrong estimation (local) 88662743 88663716 2252450 2253452 NC_000014.9 velvet.61247 96.91 True relocation, scaffold gap is present, inconsistency = -19704 88647717 88648642 2257157 2258079 NC_000014.9 velvet.61247 99.68 True fake: scaffold gap size wrong estimation (local) 88678242 88679438 2293431 2294627 NC_000014.9 velvet.61247 99.92 True fake: scaffold gap size wrong estimation (local) 88679714 88684229 2295724 2300228 NC_000014.9 velvet.61247 99.71 True fake: scaffold gap size wrong estimation (local) 88698565 88702928 2315623 2319986 NC_000014.9 velvet.61247 99.95 True fake: scaffold gap size wrong estimation (local) 88703049 88707296 2320661 2324908 NC_000014.9 velvet.61247 99.95 True fake: scaffold gap size wrong estimation (local) 88707420 88711323 2325733 2329636 NC_000014.9 velvet.61247 99.97 True fake: scaffold gap size wrong estimation (local) 88729902 88731122 2352305 2353525 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 88732669 88736017 2355790 2359205 NC_000014.9 velvet.61247 97.89 True fake: scaffold gap size wrong estimation (local) 88736289 88740908 2360206 2365588 NC_000014.9 velvet.61247 99.96 True fake: scaffold gap size wrong estimation (local) 88741142 88745855 2366603 2371844 NC_000014.9 velvet.61247 99.98 True indel: indel (> 5bp) 88745931 88747163 2371985 2373217 NC_000014.9 velvet.61247 99.92 True fake: scaffold gap size wrong estimation (local) 88747418 88754863 2374130 2381568 NC_000014.9 velvet.61247 99.85 True fake: scaffold gap size wrong estimation (local) 88755081 88757895 2382336 2385496 NC_000014.9 velvet.61247 99.93 True fake: scaffold gap size wrong estimation (local) 88758500 88759630 2386727 2387885 NC_000014.9 velvet.61247 97.33 True relocation, scaffold gap is present, inconsistency = 6428620 82321660 82322321 2396104 2395444 NC_000014.9 velvet.61247 99.24 True inversion, scaffold gap is present 82322405 82324324 2399058 2400977 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 6439430 88763765 88765898 2400988 2403121 NC_000014.9 velvet.61247 99.95 True relocation, scaffold gap is present, inconsistency = 6446551 82311163 82317203 2409172 2403132 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 82309156 82309745 2411646 2411057 NC_000014.9 velvet.61247 99.49 True relocation, scaffold gap is present, inconsistency = 15948559 98258315 98260191 2411657 2413533 NC_000014.9 velvet.61247 99.73 True fake: scaffold gap size wrong estimation (local) 98260474 98282004 2414652 2438202 NC_000014.9 velvet.61247 99.62 True relocation, scaffold gap is present, inconsistency = 110583 98148982 98149880 2439111 2438213 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 98144886 98148720 2443657 2439823 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 98142275 98144599 2447118 2444794 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 9355809 88780873 88781767 2451817 2452711 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 88784683 88786580 2455230 2457127 NC_000014.9 velvet.61247 100.0 True local misassembly 88783004 88783821 2457475 2458292 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 88786885 88788911 2458303 2460329 NC_000014.9 velvet.61247 99.95 True fake: scaffold gap size wrong estimation (local) 88789670 88792468 2461741 2464539 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 88811927 88813288 2479476 2480805 NC_000014.9 velvet.61247 97.63 True fake: scaffold gap size wrong estimation (local) 88813547 88815176 2481876 2483541 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 88816002 88816541 2484756 2485295 NC_000014.9 velvet.61247 98.15 True fake: scaffold gap size wrong estimation (local) 88817804 88819870 2487322 2489388 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 88819966 88820782 2489557 2490373 NC_000014.9 velvet.61247 99.88 True fake: scaffold gap size wrong estimation (local) 88820977 88825968 2491106 2496886 NC_000014.9 velvet.61247 99.92 True relocation, scaffold gap is present, inconsistency = 17716295 71102282 71104671 2499286 2496897 NC_000014.9 velvet.61247 99.96 True relocation, scaffold gap is present, inconsistency = 27206819 98311501 98312829 2499297 2500625 NC_000014.9 velvet.61247 99.92 True fake: scaffold gap size wrong estimation (local) 98315134 98317685 2504119 2506670 NC_000014.9 velvet.61247 99.96 True fake: scaffold gap size wrong estimation (local) 98318552 98321736 2507559 2510743 NC_000014.9 velvet.61247 99.87 True inversion, scaffold gap is present 98326673 98330440 2515722 2511892 NC_000014.9 velvet.61247 99.1 True fake: scaffold gap size wrong estimation (local) 98325334 98326499 2517487 2516322 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 219226 98096036 98106086 2517509 2527588 NC_000014.9 velvet.61247 99.67 True relocation, scaffold gap is present, inconsistency = 52080470 46011518 46012430 2531636 2530724 NC_000014.9 velvet.61247 99.89 True fake: scaffold gap size wrong estimation (local) 46009771 46011014 2533499 2532256 NC_000014.9 velvet.61247 99.6 True relocation, scaffold gap is present, inconsistency = 23756547 22252586 22253203 2533520 2534137 NC_000014.9 velvet.61247 99.84 True local misassembly 22251654 22252295 2534656 2535297 NC_000014.9 velvet.61247 99.69 True relocation, scaffold gap is present, inconsistency = 23748274 46002991 46006377 2541104 2537719 NC_000014.9 velvet.61247 99.44 True relocation, scaffold gap is present, inconsistency = -51228923 97223592 97226539 2549426 2546479 NC_000014.9 velvet.61247 99.93 True fake: not a misassembly (possible transposable element) 22249068 22251428 2550931 2553291 NC_000014.9 velvet.61247 99.83 True fake: not a misassembly (possible transposable element) 97221422 97223302 2555134 2553302 NC_000014.9 velvet.61247 97.4 True relocation, scaffold gap is present, inconsistency = 901395 98125209 98137856 2555646 2568292 NC_000014.9 velvet.61247 99.99 True relocation, scaffold gap is present, inconsistency = 27037711 71075805 71078944 2579968 2576846 NC_000014.9 velvet.61247 99.46 True fake: scaffold gap size wrong estimation (local) 71068316 71074973 2589307 2581713 NC_000014.9 velvet.61247 96.13 True fake: scaffold gap size wrong estimation (local) 71041083 71050157 2616240 2607185 NC_000014.9 velvet.61247 99.79 True fake: scaffold gap size wrong estimation (local) 71039207 71040883 2617972 2616372 NC_000014.9 velvet.61247 95.38 True fake: scaffold gap size wrong estimation (local) 71035836 71036813 2621840 2620874 NC_000014.9 velvet.61247 98.85 True fake: scaffold gap size wrong estimation (local) 71025684 71035472 2632775 2622975 NC_000014.9 velvet.61247 99.64 True relocation, scaffold gap is present, inconsistency = 27114702 98150185 98155022 2632786 2637623 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 98155243 98158091 2638684 2641532 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 98158323 98160425 2642517 2644619 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 98160632 98162225 2645490 2647083 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 98162226 98164279 2647643 2649696 NC_000014.9 velvet.61247 98.59 True fake: scaffold gap size wrong estimation (local) 98164280 98169013 2649788 2654521 NC_000014.9 velvet.61247 99.41 True fake: scaffold gap size wrong estimation (extensive) 98169393 98175542 2663078 2669227 NC_000014.9 velvet.61247 99.93 True relocation, scaffold gap is present, inconsistency = 61179 98237250 98239504 2672010 2669756 NC_000014.9 velvet.61247 99.69 True relocation, scaffold gap is present, inconsistency = 40250 98193103 98196205 2672805 2675907 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 98196667 98198078 2677120 2678531 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = -8166 98189923 98193084 2678542 2681703 NC_000014.9 velvet.61247 99.97 True relocation, scaffold gap is present, inconsistency = 12789 98207879 98211109 2686939 2683709 NC_000014.9 velvet.61247 100.0 True inversion, scaffold gap is present 98229469 98237255 2706579 2714357 NC_000014.9 velvet.61247 99.76 True fake: scaffold gap size wrong estimation (extensive) 98248279 98255660 2716195 2724521 NC_000014.9 velvet.61247 98.03 True relocation, scaffold gap is present, inconsistency = 15946822 82276473 82278097 2749514 2747881 NC_000014.9 velvet.61247 99.88 True relocation, scaffold gap is present, inconsistency = -16027721 98295791 98296937 2757917 2756771 NC_000014.9 velvet.61247 99.91 True inversion, scaffold gap is present 98289755 98291879 2757928 2760053 NC_000014.9 velvet.61247 99.81 True fake: scaffold gap size wrong estimation (local) 98292162 98293285 2761077 2762200 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 31412332 66873266 66873894 2768764 2768136 NC_000014.9 velvet.61247 98.25 True fake: scaffold gap size wrong estimation (local) 66871724 66872614 2770526 2769639 NC_000014.9 velvet.61247 99.33 True fake: scaffold gap size wrong estimation (local) 66868661 66871625 2774208 2771244 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 66864755 66868539 2778850 2775100 NC_000014.9 velvet.61247 99.1 True fake: scaffold gap size wrong estimation (local) 66863253 66863763 2780203 2779693 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 66860990 66863136 2783315 2781169 NC_000014.9 velvet.61247 99.95 True fake: scaffold gap size wrong estimation (local) 66855043 66860898 2789339 2783476 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (extensive) 66832115 66834413 2819750 2817063 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 47097 66884849 66887335 2823089 2825626 NC_000014.9 velvet.61247 99.96 True fake: scaffold gap size wrong estimation (local) 66887588 66890336 2826696 2829472 NC_000014.9 velvet.61247 98.88 True fake: scaffold gap size wrong estimation (local) 66892238 66893235 2832031 2833027 NC_000014.9 velvet.61247 99.9 True local misassembly 66890435 66892190 2833038 2834793 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 66920377 66921005 2862194 2862814 NC_000014.9 velvet.61247 98.38 True fake: scaffold gap size wrong estimation (local) 66921956 66925911 2863495 2867749 NC_000014.9 velvet.61247 99.87 True fake: scaffold gap size wrong estimation (local) 66927424 66929084 2869954 2871667 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 66931307 66932453 2874654 2875800 NC_000014.9 velvet.61247 99.39 True fake: scaffold gap size wrong estimation (local) 66932454 66933908 2876303 2877757 NC_000014.9 velvet.61247 97.8 True fake: scaffold gap size wrong estimation (local) 66934165 66935617 2878280 2879732 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 66936298 66937397 2881075 2882174 NC_000014.9 velvet.61247 96.18 True fake: scaffold gap size wrong estimation (local) 66952994 66953791 2894740 2895537 NC_000014.9 velvet.61247 100.0 True fake: not a misassembly (possible transposable element) 66951516 66952745 2896777 2895548 NC_000014.9 velvet.61247 99.92 True fake: not a misassembly (possible transposable element) 66954068 66955584 2896788 2898304 NC_000014.9 velvet.61247 100.0 True fake: not a misassembly (possible transposable element) 66949353 66950933 2900776 2899193 NC_000014.9 velvet.61247 100.0 True fake: not a misassembly (possible transposable element) 66957496 66969544 2900880 2914415 NC_000014.9 velvet.61247 99.97 True fake: scaffold gap size wrong estimation (local) 66970117 66972025 2915828 2917695 NC_000014.9 velvet.61247 97.84 True relocation, scaffold gap is present, inconsistency = 20982 66946657 66949124 2920141 2917706 NC_000014.9 velvet.61247 98.7 True fake: scaffold gap size wrong estimation (extensive) 66913607 66919797 2945178 2938182 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 66905995 66913333 2953643 2946226 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 78560 66991904 66994119 2953654 2955869 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 66994242 66997108 2957083 2959939 NC_000014.9 velvet.61247 99.62 True fake: scaffold gap size wrong estimation (local) 66997367 67008204 2960906 2972124 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 23179 67049784 67051272 2992013 2990525 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67047484 67049209 2995032 2993307 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67044296 67047315 2999009 2995990 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 30864658 36163162 36168382 3010265 3015481 NC_000014.9 velvet.61247 99.81 True fake: scaffold gap size wrong estimation (local) 36182094 36182679 3028328 3028913 NC_000014.9 velvet.61247 99.66 True fake: scaffold gap size wrong estimation (local) 36183136 36184614 3030055 3031533 NC_000014.9 velvet.61247 99.8 True fake: scaffold gap size wrong estimation (local) 36190706 36194684 3039846 3043821 NC_000014.9 velvet.61247 99.85 True fake: scaffold gap size wrong estimation (local) 36198679 36201541 3044469 3047327 NC_000014.9 velvet.61247 99.79 True fake: scaffold gap size wrong estimation (local) 36201624 36231864 3047467 3079555 NC_000014.9 velvet.61247 99.74 True relocation, scaffold gap is present, inconsistency = 5725412 41957287 41961747 3079566 3084025 NC_000014.9 velvet.61247 99.93 True relocation, scaffold gap is present, inconsistency = 25071732 67033570 67036862 3084116 3087478 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67037809 67039546 3089949 3091686 NC_000014.9 velvet.61247 100.0 True fake: not a misassembly (possible transposable element) 67039589 67041216 3094068 3092441 NC_000014.9 velvet.61247 99.94 True fake: not a misassembly (possible transposable element) 67036864 67037545 3094455 3095136 NC_000014.9 velvet.61247 100.0 True relocation, inconsistency = 9243664 76281210 76288623 3095137 3102461 NC_000014.9 velvet.61247 98.69 True fake: not a misassembly (possible transposable element) 25142355 25143724 3102472 3103830 NC_000014.9 velvet.61247 98.91 True fake: not a misassembly (possible transposable element) 76288894 76289677 3103845 3104628 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 76289771 76290798 3104806 3105833 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 76291371 76294645 3107170 3110434 NC_000014.9 velvet.61247 99.54 True fake: scaffold gap size wrong estimation (local) 76295412 76297158 3111995 3113741 NC_000014.9 velvet.61247 99.83 True relocation, scaffold gap is present, inconsistency = -51134740 25164711 25166357 3116034 3117660 NC_000014.9 velvet.61247 98.53 True relocation, scaffold gap is present, inconsistency = 41897335 67068698 67069374 3122666 3123342 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = -30826431 36242954 36244154 3123353 3124553 NC_000014.9 velvet.61247 99.92 True fake: not a misassembly (possible transposable element) 67068061 67068637 3125140 3124564 NC_000014.9 velvet.61247 100.0 True fake: not a misassembly (possible transposable element) 36245269 36245774 3126805 3127310 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 30825857 67071642 67081339 3127321 3139781 NC_000014.9 velvet.61247 99.05 True relocation, scaffold gap is present, inconsistency = -30830336 36252329 36253575 3141107 3142353 NC_000014.9 velvet.61247 99.92 True fake: scaffold gap size wrong estimation (local) 36256424 36257692 3142364 3143632 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 36257796 36260072 3144452 3146687 NC_000014.9 velvet.61247 98.06 True fake: scaffold gap size wrong estimation (local) 36260301 36265677 3147630 3153002 NC_000014.9 velvet.61247 99.83 True fake: scaffold gap size wrong estimation (local) 36265765 36269795 3153178 3157207 NC_000014.9 velvet.61247 99.85 True relocation, scaffold gap is present, inconsistency = -32496 36237310 36239403 3157218 3159311 NC_000014.9 velvet.61247 99.9 True fake: scaffold gap size wrong estimation (local) 36240896 36242000 3161591 3162695 NC_000014.9 velvet.61247 98.91 True fake: not a misassembly (possible transposable element) 41962013 41962582 3162994 3163563 NC_000014.9 velvet.61247 100.0 True fake: not a misassembly (possible transposable element) 36242271 36242919 3163833 3164481 NC_000014.9 velvet.61247 99.54 True fake: scaffold gap size wrong estimation (local) 36269818 36274115 3187794 3192092 NC_000014.9 velvet.61247 99.98 True relocation, scaffold gap is present, inconsistency = 30808182 67082308 67086396 3192103 3196236 NC_000014.9 velvet.61247 99.93 True relocation, scaffold gap is present, inconsistency = -27466 67087072 67095346 3224378 3233514 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67095998 67098099 3234909 3237055 NC_000014.9 velvet.61247 99.95 True fake: scaffold gap size wrong estimation (local) 67099412 67101877 3239255 3241711 NC_000014.9 velvet.61247 99.63 True fake: scaffold gap size wrong estimation (local) 67102688 67115480 3243195 3256143 NC_000014.9 velvet.61247 99.95 True fake: scaffold gap size wrong estimation (local) 67116151 67118538 3257686 3260070 NC_000014.9 velvet.61247 99.87 True fake: scaffold gap size wrong estimation (local) 67118754 67119533 3260634 3261413 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = -30845539 36274405 36278411 3261824 3265828 NC_000014.9 velvet.61247 99.88 True fake: scaffold gap size wrong estimation (local) 36278462 36293371 3266547 3281584 NC_000014.9 velvet.61247 98.74 True relocation, scaffold gap is present, inconsistency = 30850902 67144304 67146786 3281615 3284097 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67147583 67148576 3285707 3286699 NC_000014.9 velvet.61247 99.9 True fake: scaffold gap size wrong estimation (local) 67149351 67150186 3289879 3290714 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67150484 67151659 3291908 3293083 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67151919 67152717 3293287 3294085 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67153059 67156723 3295237 3298901 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67156995 67157585 3299592 3300182 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67158339 67161252 3301438 3304351 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = -41616 67120157 67123419 3304872 3308134 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67123514 67124152 3309041 3309673 NC_000014.9 velvet.61247 99.05 True fake: scaffold gap size wrong estimation (local) 67124402 67125528 3310052 3311178 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67125811 67126635 3311486 3312310 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67129796 67130610 3317030 3317843 NC_000014.9 velvet.61247 99.63 True fake: scaffold gap size wrong estimation (local) 67130707 67134966 3317976 3322908 NC_000014.9 velvet.61247 99.98 True fake: scaffold gap size wrong estimation (local) 67135251 67137129 3324024 3325847 NC_000014.9 velvet.61247 97.04 True fake: scaffold gap size wrong estimation (local) 67137752 67138909 3327442 3328599 NC_000014.9 velvet.61247 99.83 True fake: scaffold gap size wrong estimation (local) 67139201 67140141 3328795 3329735 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67140402 67144182 3330714 3334603 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67161784 67164017 3346854 3349028 NC_000014.9 velvet.61247 97.35 True fake: scaffold gap size wrong estimation (local) 67164949 67165809 3350816 3351676 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67166892 67169847 3353652 3356607 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67170046 67171170 3356938 3358062 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67171386 67174109 3359039 3361762 NC_000014.9 velvet.61247 99.3 True local misassembly 67178527 67179171 3361763 3362407 NC_000014.9 velvet.61247 98.45 True fake: scaffold gap size wrong estimation (local) 67179383 67183592 3363394 3367645 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67184117 67189857 3368904 3374697 NC_000014.9 velvet.61247 99.96 True fake: scaffold gap size wrong estimation (local) 67191243 67192909 3376821 3378487 NC_000014.9 velvet.61247 99.94 True fake: scaffold gap size wrong estimation (local) 67194996 67195737 3381283 3382024 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67196522 67202193 3383593 3389263 NC_000014.9 velvet.61247 99.93 True fake: scaffold gap size wrong estimation (local) 67202434 67203755 3390108 3391429 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67204014 67205944 3392202 3394132 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67206985 67208720 3395993 3397728 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67208929 67209563 3398378 3399012 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67210992 67213108 3401161 3403203 NC_000014.9 velvet.61247 96.49 True fake: scaffold gap size wrong estimation (local) 67215077 67223016 3405327 3414773 NC_000014.9 velvet.61247 98.92 True fake: scaffold gap size wrong estimation (local) 67223305 67224275 3415730 3416700 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67224560 67225951 3417198 3418589 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67226664 67227187 3419709 3420232 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67228201 67231721 3421893 3425413 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67231968 67233139 3425814 3426985 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67233360 67234602 3427971 3429213 NC_000014.9 velvet.61247 99.92 True fake: scaffold gap size wrong estimation (local) 67235745 67236797 3431058 3432110 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67237096 67238680 3432884 3434505 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67238938 67239613 3434806 3435481 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67239761 67243253 3436366 3439858 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67243801 67245566 3441167 3442932 NC_000014.9 velvet.61247 99.89 True indel: indel (> 5bp) 67245608 67246382 3442933 3443707 NC_000014.9 velvet.61247 98.71 True local misassembly 67246941 67247714 3443708 3444481 NC_000014.9 velvet.61247 98.71 True fake: scaffold gap size wrong estimation (local) 67249256 67254896 3446755 3453117 NC_000014.9 velvet.61247 98.03 True fake: scaffold gap size wrong estimation (local) 67255148 67255713 3453556 3454121 NC_000014.9 velvet.61247 100.0 True local misassembly 67255959 67256576 3454122 3454739 NC_000014.9 velvet.61247 98.38 True fake: scaffold gap size wrong estimation (local) 67256727 67258911 3455775 3457906 NC_000014.9 velvet.61247 97.55 True relocation, scaffold gap is present, inconsistency = 796315 68057121 68061076 3459801 3463826 NC_000014.9 velvet.61247 100.0 True fake: not a misassembly (possible transposable element) 67276114 67278053 3490588 3492527 NC_000014.9 velvet.61247 100.0 True fake: not a misassembly (possible transposable element) 68093770 68095722 3492538 3494490 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 68096005 68098556 3495617 3498166 NC_000014.9 velvet.61247 99.92 True relocation, scaffold gap is present, inconsistency = -820194 67278373 67280820 3498177 3500624 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = -14222 67267552 67271818 3501578 3505897 NC_000014.9 velvet.61247 99.84 True fake: scaffold gap size wrong estimation (local) 67272040 67272728 3506857 3507545 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 7291546 74564649 74569175 3512703 3507920 NC_000014.9 velvet.61247 99.87 True fake: scaffold gap size wrong estimation (local) 74562216 74564023 3515981 3514174 NC_000014.9 velvet.61247 99.94 True fake: scaffold gap size wrong estimation (local) 74561278 74561927 3517269 3516620 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = -9341 74569183 74570608 3518705 3517280 NC_000014.9 velvet.61247 99.93 True relocation, scaffold gap is present, inconsistency = 7284629 67281194 67284372 3518887 3522440 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67284595 67285383 3523256 3524044 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67285670 67286623 3524851 3525804 NC_000014.9 velvet.61247 99.79 True local misassembly 67287120 67288127 3526021 3527028 NC_000014.9 velvet.61247 99.01 True fake: scaffold gap size wrong estimation (local) 67288380 67288969 3527608 3528197 NC_000014.9 velvet.61247 100.0 True local misassembly 67289251 67289768 3528198 3528715 NC_000014.9 velvet.61247 98.07 True fake: scaffold gap size wrong estimation (local) 67290079 67291259 3529516 3530696 NC_000014.9 velvet.61247 99.83 True fake: scaffold gap size wrong estimation (local) 67291586 67294703 3531758 3534875 NC_000014.9 velvet.61247 99.97 True fake: scaffold gap size wrong estimation (local) 67295521 67296349 3536560 3537388 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67296875 67298322 3538042 3539489 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67298547 67300398 3540378 3542229 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 7187540 74515530 74516349 3570640 3569821 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 74513808 74515238 3572721 3571291 NC_000014.9 velvet.61247 99.65 True fake: scaffold gap size wrong estimation (local) 74497571 74513529 3589798 3573752 NC_000014.9 velvet.61247 99.91 True relocation, scaffold gap is present, inconsistency = 40967 74554507 74556585 3589809 3591887 NC_000014.9 velvet.61247 99.9 True fake: scaffold gap size wrong estimation (local) 74557283 74558161 3593476 3594354 NC_000014.9 velvet.61247 99.89 True relocation, scaffold gap is present, inconsistency = -15582 74543587 74554275 3595362 3606035 NC_000014.9 velvet.61247 99.7 True relocation, scaffold gap is present, inconsistency = 44471 74491953 74496828 3613198 3608323 NC_000014.9 velvet.61247 99.94 True fake: scaffold gap size wrong estimation (local) 74485303 74486940 3616071 3614434 NC_000014.9 velvet.61247 99.88 True fake: scaffold gap size wrong estimation (local) 74483935 74485023 3617961 3616869 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 7180094 67300997 67303830 3617972 3620805 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67304056 67306052 3621852 3623848 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67306670 67307884 3625177 3626391 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67308694 67311075 3628022 3630456 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67311343 67314845 3631444 3634946 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67323648 67324648 3650045 3651045 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67331327 67337257 3654942 3660872 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = -38803057 28535318 28538671 3661990 3665343 NC_000014.9 velvet.61247 99.76 True relocation, scaffold gap is present, inconsistency = 34653055 63191737 63193406 3665354 3667023 NC_000014.9 velvet.61247 99.94 True local misassembly 63190683 63191456 3667034 3667807 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = -34652583 28538884 28539516 3667818 3668447 NC_000014.9 velvet.61247 99.05 True relocation, scaffold gap is present, inconsistency = 69935986 98475900 98480877 3673863 3668845 NC_000014.9 velvet.61247 99.76 True fake: scaffold gap size wrong estimation (local) 98470540 98475671 3679943 3674812 NC_000014.9 velvet.61247 99.84 True relocation, scaffold gap is present, inconsistency = 2403021 96064790 96067508 3679954 3682673 NC_000014.9 velvet.61247 99.89 True fake: scaffold gap size wrong estimation (local) 96070639 96073385 3683703 3686650 NC_000014.9 velvet.61247 95.07 True relocation, scaffold gap is present, inconsistency = -14018 96073949 96081754 3701232 3709280 NC_000014.9 velvet.61247 99.73 True fake: scaffold gap size wrong estimation (local) 96081896 96090170 3710099 3719124 NC_000014.9 velvet.61247 99.96 True fake: scaffold gap size wrong estimation (local) 96090444 96098364 3720209 3728125 NC_000014.9 velvet.61247 99.7 True relocation, scaffold gap is present, inconsistency = -71136834 24961541 24962313 3728136 3728908 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 11797483 36759947 36763761 3732845 3729059 NC_000014.9 velvet.61247 99.27 True fake: scaffold gap size wrong estimation (local) 36757453 36759710 3736214 3733900 NC_000014.9 velvet.61247 99.96 True relocation, scaffold gap is present, inconsistency = 11148 36739687 36744595 3742912 3737924 NC_000014.9 velvet.61247 99.92 True fake: scaffold gap size wrong estimation (local) 36736209 36739399 3747140 3743950 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 36731225 36735444 3753002 3748783 NC_000014.9 velvet.61247 99.95 True fake: scaffold gap size wrong estimation (local) 36730092 36730958 3754853 3753987 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 11733543 24990692 24994767 3756635 3760710 NC_000014.9 velvet.61247 100.0 True fake: not a misassembly (possible transposable element) 96124781 96128803 3760721 3764743 NC_000014.9 velvet.61247 100.0 True fake: not a misassembly (possible transposable element) 24994820 24996608 3764754 3766525 NC_000014.9 velvet.61247 99.04 True fake: scaffold gap size wrong estimation (local) 24996798 25000079 3767527 3770800 NC_000014.9 velvet.61247 99.76 True relocation, scaffold gap is present, inconsistency = 11710038 36710226 36715897 3777388 3770909 NC_000014.9 velvet.61247 98.91 True fake: scaffold gap size wrong estimation (local) 36709160 36710098 3778901 3777963 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 36705314 36709008 3783261 3779566 NC_000014.9 velvet.61247 99.92 True fake: scaffold gap size wrong estimation (local) 36702496 36704378 3786864 3784982 NC_000014.9 velvet.61247 99.95 True fake: scaffold gap size wrong estimation (local) 36699294 36702365 3790911 3787801 NC_000014.9 velvet.61247 99.64 True relocation, scaffold gap is present, inconsistency = -59458709 96154789 96155560 3794125 3793354 NC_000014.9 velvet.61247 98.19 True local misassembly 96153562 96154480 3795044 3794126 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 59427998 36716125 36725220 3795388 3804483 NC_000014.9 velvet.61247 99.91 True fake: scaffold gap size wrong estimation (local) 36725532 36727435 3805498 3807401 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 36727708 36730090 3808461 3810843 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 59402912 96135103 96136553 3814394 3812944 NC_000014.9 velvet.61247 99.72 True relocation, scaffold gap is present, inconsistency = -17626 96151075 96152718 3816048 3814405 NC_000014.9 velvet.61247 99.88 True fake: scaffold gap size wrong estimation (local) 96147076 96150840 3820823 3817108 NC_000014.9 velvet.61247 97.21 True fake: scaffold gap size wrong estimation (local) 96144191 96146867 3824637 3821961 NC_000014.9 velvet.61247 99.81 True fake: scaffold gap size wrong estimation (local) 96137894 96144074 3831024 3824844 NC_000014.9 velvet.61247 99.76 True fake: scaffold gap size wrong estimation (local) 96136563 96137755 3833218 3832012 NC_000014.9 velvet.61247 99.57 True relocation, scaffold gap is present, inconsistency = 18644 96158141 96158728 3834960 3835547 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 96159966 96164724 3837580 3842347 NC_000014.9 velvet.61247 99.81 True local misassembly 96159338 96159949 3842806 3843417 NC_000014.9 velvet.61247 99.84 True fake: scaffold gap size wrong estimation (local) 96164969 96168064 3843428 3846523 NC_000014.9 velvet.61247 99.94 True fake: scaffold gap size wrong estimation (local) 96168634 96172504 3847907 3851777 NC_000014.9 velvet.61247 99.82 True fake: scaffold gap size wrong estimation (local) 96172782 96175346 3852876 3855440 NC_000014.9 velvet.61247 99.88 True relocation, scaffold gap is present, inconsistency = 59058 96112034 96113713 3857188 3855451 NC_000014.9 velvet.61247 99.88 True fake: scaffold gap size wrong estimation (local) 96101868 96111856 3868194 3858073 NC_000014.9 velvet.61247 99.42 True fake: scaffold gap size wrong estimation (local) 96099678 96101611 3871022 3869100 NC_000014.9 velvet.61247 99.22 True fake: not a misassembly (possible transposable element) 98440690 98441598 3871033 3871941 NC_000014.9 velvet.61247 99.78 True fake: not a misassembly (possible transposable element) 96098366 96099562 3873151 3871952 NC_000014.9 velvet.61247 99.27 True relocation, inconsistency = 2342097 98441660 98446820 3873152 3878312 NC_000014.9 velvet.61247 99.77 True relocation, scaffold gap is present, inconsistency = -22428430 76018401 76020045 3878323 3879957 NC_000014.9 velvet.61247 99.33 True relocation, scaffold gap is present, inconsistency = -12900 76007156 76009831 3879968 3882643 NC_000014.9 velvet.61247 99.96 True fake: not a misassembly (possible transposable element) 102307480 102308654 3882654 3883828 NC_000014.9 velvet.61247 100.0 True fake: not a misassembly (possible transposable element) 76010059 76010902 3884031 3884874 NC_000014.9 velvet.61247 100.0 True fake: not a misassembly (possible transposable element) 18547183 18548760 3886598 3885021 NC_000014.9 velvet.61247 99.81 True fake: not a misassembly (possible transposable element) 76024032 76025431 3898128 3899527 NC_000014.9 velvet.61247 99.93 True fake: scaffold gap size wrong estimation (local) 76027739 76029872 3902734 3904899 NC_000014.9 velvet.61247 97.61 True fake: scaffold gap size wrong estimation (local) 76030006 76036524 3905614 3912132 NC_000014.9 velvet.61247 99.95 True local misassembly 76039270 76040006 3912133 3912869 NC_000014.9 velvet.61247 98.51 True fake: scaffold gap size wrong estimation (local) 76040249 76043375 3913739 3916939 NC_000014.9 velvet.61247 99.9 True relocation, scaffold gap is present, inconsistency = 1997377 74042156 74042861 3917655 3916950 NC_000014.9 velvet.61247 99.86 True fake: scaffold gap size wrong estimation (local) 74041210 74041762 3921693 3921141 NC_000014.9 velvet.61247 98.19 True local misassembly 74040260 74041031 3922465 3921694 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 74037957 74039432 3925846 3924372 NC_000014.9 velvet.61247 99.73 True fake: scaffold gap size wrong estimation (local) 74033884 74034980 3936815 3935719 NC_000014.9 velvet.61247 99.73 True fake: scaffold gap size wrong estimation (local) 74031164 74032112 3940253 3939318 NC_000014.9 velvet.61247 98.62 True local misassembly 74032762 74033285 3940787 3940264 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 74029684 74030503 3944489 3943670 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 74027386 74028083 3947773 3947076 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 17512 74008669 74009792 3948978 3947855 NC_000014.9 velvet.61247 99.91 True fake: scaffold gap size wrong estimation (local) 74006585 74007114 3952083 3951555 NC_000014.9 velvet.61247 99.43 True fake: scaffold gap size wrong estimation (local) 74004425 74005134 3955531 3954822 NC_000014.9 velvet.61247 100.0 True fake: not a misassembly (possible transposable element) 36862741 36866224 3959202 3955617 NC_000014.9 velvet.61247 99.91 True fake: not a misassembly (possible transposable element) 74001687 74003863 3962290 3959213 NC_000014.9 velvet.61247 99.91 True fake: scaffold gap size wrong estimation (local) 74000742 74001222 3963382 3962873 NC_000014.9 velvet.61247 100.0 True fake: not a misassembly (possible transposable element) 36860240 36861952 3965105 3963393 NC_000014.9 velvet.61247 99.94 True fake: not a misassembly (possible transposable element) 73995303 73999209 3972325 3967479 NC_000014.9 velvet.61247 96.15 True fake: scaffold gap size wrong estimation (local) 73992946 73993894 3975753 3974805 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = -22078874 96061809 96063302 3985764 3984271 NC_000014.9 velvet.61247 99.87 True relocation, scaffold gap is present, inconsistency = 28598336 67462644 67463168 3986069 3986593 NC_000014.9 velvet.61247 100.0 True fake: not a misassembly (possible transposable element) 67474296 67474796 3987270 3987770 NC_000014.9 velvet.61247 99.8 True fake: not a misassembly (possible transposable element) 67463672 67466740 3987781 3990849 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 67467025 67468025 3991876 3992876 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = 4843564 62619837 62622695 3996662 3993642 NC_000014.9 velvet.61247 99.79 True relocation, scaffold gap is present, inconsistency = 25930813 36687224 36689013 3998462 3996673 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 36673145 36686956 4013255 3999419 NC_000014.9 velvet.61247 99.76 True relocation, scaffold gap is present, inconsistency = 30823011 67509978 67519727 4013266 4023197 NC_000014.9 velvet.61247 99.56 True fake: scaffold gap size wrong estimation (local) 67519870 67520562 4023939 4024617 NC_000014.9 velvet.61247 97.98 True relocation, scaffold gap is present, inconsistency = -20773 67501093 67502110 4025921 4026936 NC_000014.9 velvet.61247 99.51 True fake: scaffold gap size wrong estimation (local) 67502764 67503688 4027571 4028495 NC_000014.9 velvet.61247 99.68 True local misassembly 67499266 67500136 4029706 4030575 NC_000014.9 velvet.61247 99.66 True relocation, scaffold gap is present, inconsistency = 28687829 96188295 96190538 4030905 4033148 NC_000014.9 velvet.61247 99.91 True relocation, scaffold gap is present, inconsistency = 40867497 55319939 55320466 4034007 4033480 NC_000014.9 velvet.61247 97.92 True local misassembly 55318588 55319694 4035114 4034008 NC_000014.9 velvet.61247 99.91 True fake: not a misassembly (possible transposable element) 73965700 73967552 4036977 4035125 NC_000014.9 velvet.61247 99.95 True fake: not a misassembly (possible transposable element) 55317466 55318295 4037817 4036988 NC_000014.9 velvet.61247 98.67 True local misassembly 55316725 55317359 4038452 4037818 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 55313374 55316301 4042329 4039372 NC_000014.9 velvet.61247 98.88 True fake: scaffold gap size wrong estimation (local) 55312251 55312909 4043747 4043075 NC_000014.9 velvet.61247 96.73 True fake: scaffold gap size wrong estimation (local) 55306832 55311749 4050073 4044880 NC_000014.9 velvet.61247 99.78 True fake: scaffold gap size wrong estimation (local) 55305666 55306551 4051823 4050938 NC_000014.9 velvet.61247 99.89 True relocation, scaffold gap is present, inconsistency = 40905871 96212433 96216600 4051834 4056098 NC_000014.9 velvet.61247 99.93 True fake: scaffold gap size wrong estimation (local) 96216803 96218665 4057110 4058972 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = -12605 96206071 96209790 4058983 4062701 NC_000014.9 velvet.61247 99.87 True fake: scaffold gap size wrong estimation (local) 96210037 96212409 4063670 4066042 NC_000014.9 velvet.61247 99.92 True relocation, scaffold gap is present, inconsistency = 40913071 55295654 55296380 4067354 4066628 NC_000014.9 velvet.61247 98.35 True local misassembly 55294482 55295379 4068252 4067355 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = -10640 55303581 55304519 4069793 4068855 NC_000014.9 velvet.61247 98.08 True fake: scaffold gap size wrong estimation (local) 55301427 55303109 4072927 4071245 NC_000014.9 velvet.61247 99.41 True local misassembly 55300577 55301152 4073503 4072928 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 55299496 55300319 4075428 4074605 NC_000014.9 velvet.61247 99.88 True fake: scaffold gap size wrong estimation (extensive) 55265966 55266769 4100918 4100115 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 55261697 55263872 4105724 4103549 NC_000014.9 velvet.61247 99.91 True fake: scaffold gap size wrong estimation (local) 55260507 55261321 4107747 4106933 NC_000014.9 velvet.61247 100.0 True local misassembly 55264464 55265182 4109114 4108424 NC_000014.9 velvet.61247 96.11 True relocation, scaffold gap is present, inconsistency = 10213 55251256 55251773 4112109 4111592 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 55250316 55251053 4112955 4112218 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 55247478 55250039 4116681 4114116 NC_000014.9 velvet.61247 99.46 True relocation, scaffold gap is present, inconsistency = -10201 55254175 55257668 4120185 4116692 NC_000014.9 velvet.61247 99.94 True fake: scaffold gap size wrong estimation (extensive) 55244864 55246464 4122033 4120433 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = -9119 55252378 55252996 4123638 4123020 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (extensive) 55243343 55244623 4125323 4124043 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 55241612 55243131 4127230 4125711 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 55239137 55241523 4130390 4128004 NC_000014.9 velvet.61247 99.96 True fake: scaffold gap size wrong estimation (local) 55237386 55238396 4132862 4131852 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 55235225 55236363 4135766 4134628 NC_000014.9 velvet.61247 99.91 True fake: not a misassembly (possible transposable element) 74322171 74322850 4136500 4135777 NC_000014.9 velvet.61247 99.26 True fake: not a misassembly (possible transposable element) 55225385 55227192 4139269 4137462 NC_000014.9 velvet.61247 100.0 True relocation, scaffold gap is present, inconsistency = -19094862 74319296 74319964 4140220 4139552 NC_000014.9 velvet.61247 99.85 True relocation, scaffold gap is present, inconsistency = 19084673 55232046 55234612 4142777 4140231 NC_000014.9 velvet.61247 99.21 True fake: scaffold gap size wrong estimation (local) 55229100 55231866 4146574 4143800 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 55227890 55228772 4148670 4147788 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 55223662 55225170 4150542 4149010 NC_000014.9 velvet.61247 98.52 True fake: scaffold gap size wrong estimation (local) 55221306 55223540 4153457 4151223 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 55218872 55220059 4156770 4155583 NC_000014.9 velvet.61247 99.16 True local misassembly 55218213 55218730 4157288 4156771 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 55215896 55218032 4160530 4158344 NC_000014.9 velvet.61247 99.95 True fake: scaffold gap size wrong estimation (local) 55215036 55215620 4161863 4161279 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 55211483 55213516 4166193 4164129 NC_000014.9 velvet.61247 98.12 True fake: scaffold gap size wrong estimation (local) 55209485 55210240 4168835 4168080 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 55207324 55208764 4171678 4170238 NC_000014.9 velvet.61247 99.93 True fake: scaffold gap size wrong estimation (local) 55205857 55206937 4173689 4172609 NC_000014.9 velvet.61247 99.91 True fake: scaffold gap size wrong estimation (local) 55202998 55204057 4177178 4176119 NC_000014.9 velvet.61247 98.96 True local misassembly 55201778 55202493 4177894 4177179 NC_000014.9 velvet.61247 100.0 True fake: scaffold gap size wrong estimation (local) 55198491 55200119 4185736 4184108 NC_000014.9 velvet.61247 100.0 True local misassembly 55200152 55201499 4187094 4185747 NC_000014.9 velvet.61247 99.93 True fake: scaffold gap size wrong estimation (local) 55197657 55198447 4190342 4189576 NC_000014.9 velvet.61247 96.93 True fake: scaffold gap size wrong estimation (local) 55195123 55197374 4195449 4193291 NC_000014.9 velvet.61247 95.83 True CONTIG velvet.61247 4195449 misassembled 36668668 36672851 4184 1 NC_000014.9 velvet.61260 99.88 True fake: scaffold gap size wrong estimation (local) 36658374 36668469 16039 5262 NC_000014.9 velvet.61260 99.94 True fake: scaffold gap size wrong estimation (local) 36644599 36652119 23570 16050 NC_000014.9 velvet.61260 99.92 True relocation, scaffold gap is present, inconsistency = 30886983 67543005 67545958 27473 30532 NC_000014.9 velvet.61260 99.93 True relocation, scaffold gap is present, inconsistency = 30884642 36652289 36658352 36606 30543 NC_000014.9 velvet.61260 99.93 True fake: scaffold gap size wrong estimation (local) 36629471 36631130 54225 52566 NC_000014.9 velvet.61260 99.88 True fake: scaffold gap size wrong estimation (local) 36621871 36629222 62670 55239 NC_000014.9 velvet.61260 99.97 True relocation, scaffold gap is present, inconsistency = -16561 36634905 36636955 66197 64147 NC_000014.9 velvet.61260 99.71 True relocation, scaffold gap is present, inconsistency = -53854862 90484965 90485557 70990 70407 NC_000014.9 velvet.61260 98.46 True relocation, scaffold gap is present, inconsistency = 63975237 26507274 26509717 73523 71001 NC_000014.9 velvet.61260 99.79 True relocation, scaffold gap is present, inconsistency = 41040143 67550490 67551734 74153 75428 NC_000014.9 velvet.61260 97.41 True fake: scaffold gap size wrong estimation (local) 67552798 67554969 77423 79594 NC_000014.9 velvet.61260 99.95 True local misassembly 67551906 67552512 79605 80211 NC_000014.9 velvet.61260 100.0 True fake: scaffold gap size wrong estimation (extensive) 67561893 67563502 80222 81831 NC_000014.9 velvet.61260 100.0 True relocation, scaffold gap is present, inconsistency = 14673791 82237304 82240259 81842 84797 NC_000014.9 velvet.61260 100.0 True relocation, scaffold gap is present, inconsistency = 6026889 88267663 88268906 85312 86555 NC_000014.9 velvet.61260 99.6 True relocation, scaffold gap is present, inconsistency = 64714886 23551689 23552322 87643 87010 NC_000014.9 velvet.61260 100.0 True relocation, scaffold gap is present, inconsistency = 67012445 90566377 90579564 89253 102210 NC_000014.9 velvet.61260 98.26 True fake: scaffold gap size wrong estimation (local) 90579799 90586321 103272 109794 NC_000014.9 velvet.61260 100.0 True fake: scaffold gap size wrong estimation (local) 90586570 90591097 110830 115429 NC_000014.9 velvet.61260 100.0 True relocation, scaffold gap is present, inconsistency = 8797948 99389299 99395686 115683 122070 NC_000014.9 velvet.61260 99.91 True fake: scaffold gap size wrong estimation (local) 99400037 99400883 122081 122927 NC_000014.9 velvet.61260 100.0 True fake: not a misassembly (possible transposable element) 90636461 90638062 122938 124538 NC_000014.9 velvet.61260 99.88 True fake: not a misassembly (possible transposable element) 99401170 99402515 125110 126455 NC_000014.9 velvet.61260 100.0 True relocation, scaffold gap is present, inconsistency = -8795926 90608104 90613384 127970 133194 NC_000014.9 velvet.61260 98.94 True relocation, scaffold gap is present, inconsistency = 70202364 20404359 20405729 134575 133205 NC_000014.9 velvet.61260 100.0 True fake: scaffold gap size wrong estimation (local) 20403053 20404090 136047 134967 NC_000014.9 velvet.61260 99.23 True fake: scaffold gap size wrong estimation (local) 20402271 20402884 137647 137034 NC_000014.9 velvet.61260 99.84 True fake: scaffold gap size wrong estimation (local) 20401250 20402022 138509 137737 NC_000014.9 velvet.61260 99.87 True fake: scaffold gap size wrong estimation (local) 20394766 20397752 146416 143374 NC_000014.9 velvet.61260 97.7 True relocation, scaffold gap is present, inconsistency = 78978705 99378641 99379247 148600 149206 NC_000014.9 velvet.61260 100.0 True relocation, scaffold gap is present, inconsistency = 10185 99402575 99403453 162349 163224 NC_000014.9 velvet.61260 99.66 True fake: not a misassembly (possible transposable element) 90640316 90643152 163235 166071 NC_000014.9 velvet.61260 99.86 True fake: not a misassembly (possible transposable element) 99403500 99419519 166082 182105 NC_000014.9 velvet.61260 99.98 True relocation, scaffold gap is present, inconsistency = -26201099 73218705 73221602 182390 185287 NC_000014.9 velvet.61260 100.0 True fake: scaffold gap size wrong estimation (local) 73221603 73223807 185583 187787 NC_000014.9 velvet.61260 97.46 True local misassembly 73227429 73229737 187788 190096 NC_000014.9 velvet.61260 99.57 True relocation, scaffold gap is present, inconsistency = 4607689 77837437 77839688 190107 192378 NC_000014.9 velvet.61260 98.47 True relocation, scaffold gap is present, inconsistency = 12787349 90627048 90630837 192389 196403 NC_000014.9 velvet.61260 99.34 True relocation, scaffold gap is present, inconsistency = 8793128 99423991 99428608 196429 201046 NC_000014.9 velvet.61260 100.0 True relocation, scaffold gap is present, inconsistency = 12778 99443552 99446988 203212 206648 NC_000014.9 velvet.61260 99.91 True fake: scaffold gap size wrong estimation (local) 99447269 99451583 207700 212014 NC_000014.9 velvet.61260 99.91 True fake: not a misassembly (possible transposable element) 83934580 83935943 212025 213558 NC_000014.9 velvet.61260 100.0 True fake: not a misassembly (possible transposable element) 99452408 99453570 213678 214840 NC_000014.9 velvet.61260 99.91 True relocation, scaffold gap is present, inconsistency = 3373883 102827464 102829855 217242 214851 NC_000014.9 velvet.61260 100.0 True fake: not a misassembly (possible transposable element) 99435776 99439716 221905 225843 NC_000014.9 velvet.61260 99.95 True fake: not a misassembly (possible transposable element) 102790090 102790589 249100 248601 NC_000014.9 velvet.61260 100.0 True local misassembly 102793425 102795940 251707 249111 NC_000014.9 velvet.61260 99.34 True fake: scaffold gap size wrong estimation (local) 102788799 102789588 252894 252078 NC_000014.9 velvet.61260 96.57 True relocation, scaffold gap is present, inconsistency = 3323591 99458809 99464890 253212 259293 NC_000014.9 velvet.61260 99.85 True fake: scaffold gap size wrong estimation (local) 99465084 99469496 260285 264808 NC_000014.9 velvet.61260 99.8 True fake: scaffold gap size wrong estimation (local) 99469727 99474075 265799 270147 NC_000014.9 velvet.61260 99.43 True local misassembly 99477770 99481272 270148 273650 NC_000014.9 velvet.61260 99.54 True fake: scaffold gap size wrong estimation (local) 99481273 99485743 273710 278180 NC_000014.9 velvet.61260 99.69 True fake: scaffold gap size wrong estimation (local) 99485858 99490672 278594 283483 NC_000014.9 velvet.61260 99.94 True fake: scaffold gap size wrong estimation (local) 99490960 99493146 284511 286696 NC_000014.9 velvet.61260 99.86 True fake: scaffold gap size wrong estimation (local) 99493265 99496381 287611 290727 NC_000014.9 velvet.61260 99.9 True fake: scaffold gap size wrong estimation (local) 99496963 99499067 292142 294246 NC_000014.9 velvet.61260 99.95 True fake: scaffold gap size wrong estimation (local) 99526670 99529456 319569 322355 NC_000014.9 velvet.61260 100.0 True fake: scaffold gap size wrong estimation (local) 99529706 99531588 323410 325292 NC_000014.9 velvet.61260 99.95 True relocation, scaffold gap is present, inconsistency = 3220235 102751834 102752450 325919 325303 NC_000014.9 velvet.61260 100.0 True CONTIG velvet.61260 325919 misassembled 91122866 91123466 856 256 NC_000014.9 velvet.61262 99.5 True fake: scaffold gap size wrong estimation (local) 91120681 91121400 4196 3477 NC_000014.9 velvet.61262 100.0 True fake: scaffold gap size wrong estimation (local) 91118624 91120078 8120 6691 NC_000014.9 velvet.61262 97.51 True fake: scaffold gap size wrong estimation (local) 91117297 91118042 9985 9187 NC_000014.9 velvet.61262 99.59 True fake: scaffold gap size wrong estimation (local) 91115676 91116627 11348 10397 NC_000014.9 velvet.61262 99.79 True fake: scaffold gap size wrong estimation (local) 91113275 91115437 14728 12566 NC_000014.9 velvet.61262 99.95 True relocation, scaffold gap is present, inconsistency = -25974 91133652 91134422 20325 19555 NC_000014.9 velvet.61262 99.87 True fake: scaffold gap size wrong estimation (local) 91127322 91129520 30235 28141 NC_000014.9 velvet.61262 95.2 True fake: scaffold gap size wrong estimation (local) 91125826 91127043 32556 31338 NC_000014.9 velvet.61262 98.86 True fake: scaffold gap size wrong estimation (local) 91124196 91124893 34194 33497 NC_000014.9 velvet.61262 99.86 True relocation, scaffold gap is present, inconsistency = 21390050 69730636 69731576 37704 36764 NC_000014.9 velvet.61262 100.0 True fake: scaffold gap size wrong estimation (local) 69729062 69729811 39473 38724 NC_000014.9 velvet.61262 99.87 True relocation, scaffold gap is present, inconsistency = -21490318 91215148 91216629 43705 42224 NC_000014.9 velvet.61262 99.53 True fake: scaffold gap size wrong estimation (local) 91214041 91214861 46038 45219 NC_000014.9 velvet.61262 99.76 True relocation, scaffold gap is present, inconsistency = 35059 91163280 91163988 61032 61740 NC_000014.9 velvet.61262 100.0 True relocation, scaffold gap is present, inconsistency = -9763 91154236 91156130 61751 63682 NC_000014.9 velvet.61262 98.34 True fake: scaffold gap size wrong estimation (extensive) 91164255 91164917 63984 64646 NC_000014.9 velvet.61262 99.85 True fake: scaffold gap size wrong estimation (local) 91183301 91184329 80936 81964 NC_000014.9 velvet.61262 100.0 True fake: scaffold gap size wrong estimation (local) 91185737 91186281 84282 84826 NC_000014.9 velvet.61262 99.82 True fake: scaffold gap size wrong estimation (extensive) 91197406 91198082 88611 89287 NC_000014.9 velvet.61262 100.0 True relocation, scaffold gap is present, inconsistency = -12160 91187299 91188569 90664 91934 NC_000014.9 velvet.61262 100.0 True fake: scaffold gap size wrong estimation (local) 91188651 91190000 92191 93565 NC_000014.9 velvet.61262 98.11 True fake: scaffold gap size wrong estimation (local) 91190290 91192349 94594 96651 NC_000014.9 velvet.61262 99.76 True fake: scaffold gap size wrong estimation (local) 91192708 91193594 97656 98542 NC_000014.9 velvet.61262 99.89 True fake: scaffold gap size wrong estimation (local) 91198611 91199308 98553 99250 NC_000014.9 velvet.61262 100.0 True relocation, scaffold gap is present, inconsistency = 68270 91269109 91270398 102069 100781 NC_000014.9 velvet.61262 99.84 True fake: scaffold gap size wrong estimation (local) 91267444 91268819 104261 102886 NC_000014.9 velvet.61262 99.78 True fake: scaffold gap size wrong estimation (local) 91266631 91267322 105201 104510 NC_000014.9 velvet.61262 100.0 True fake: scaffold gap size wrong estimation (local) 91262532 91265968 109976 106538 NC_000014.9 velvet.61262 99.94 True relocation, scaffold gap is present, inconsistency = 68515 91334494 91337407 109987 112900 NC_000014.9 velvet.61262 99.93 True fake: scaffold gap size wrong estimation (local) 91342182 91343048 112957 113823 NC_000014.9 velvet.61262 99.19 True local misassembly 91343242 91343853 114325 114936 NC_000014.9 velvet.61262 100.0 True fake: scaffold gap size wrong estimation (local) 91345478 91346492 117362 118376 NC_000014.9 velvet.61262 100.0 True relocation, scaffold gap is present, inconsistency = -148404 91210464 91211856 130752 132144 NC_000014.9 velvet.61262 99.93 True fake: scaffold gap size wrong estimation (local) 91216692 91217500 136632 137440 NC_000014.9 velvet.61262 99.88 True fake: scaffold gap size wrong estimation (local) 91217794 91218416 137704 138326 NC_000014.9 velvet.61262 99.84 True relocation, scaffold gap is present, inconsistency = 146278 91365199 91366176 138831 139808 NC_000014.9 velvet.61262 100.0 True fake: scaffold gap size wrong estimation (local) 91366461 91369268 140988 143795 NC_000014.9 velvet.61262 100.0 True relocation, scaffold gap is present, inconsistency = -9838 91359441 91361054 143806 145529 NC_000014.9 velvet.61262 96.26 True fake: scaffold gap size wrong estimation (local) 91390129 91391526 169655 171052 NC_000014.9 velvet.61262 100.0 True fake: scaffold gap size wrong estimation (local) 91393866 91396986 174682 177802 NC_000014.9 velvet.61262 100.0 True fake: scaffold gap size wrong estimation (local) 91426775 91427650 209565 210421 NC_000014.9 velvet.61262 97.81 True fake: scaffold gap size wrong estimation (local) 91429175 91429870 217226 217921 NC_000014.9 velvet.61262 100.0 True CONTIG velvet.61262 218426 misassembled 36152906 36156598 4424 218 NC_000014.9 velvet.61277 99.75 True fake: scaffold gap size wrong estimation (extensive) 36131086 36135831 34889 30216 NC_000014.9 velvet.61277 98.28 True relocation, scaffold gap is present, inconsistency = 11853 36109568 36119222 44554 34900 NC_000014.9 velvet.61277 99.62 True relocation, scaffold gap is present, inconsistency = -13824 36096935 36097808 71011 70138 NC_000014.9 velvet.61277 99.77 True CONTIG velvet.61277 71011 misassembled 26517207 26523721 161 6675 NC_000014.9 velvet.61314 99.97 True fake: scaffold gap size wrong estimation (local) 26524019 26529139 7748 13570 NC_000014.9 velvet.61314 99.86 True fake: scaffold gap size wrong estimation (local) 26529438 26529978 14216 14756 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 26530207 26531352 15216 16361 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 26531633 26535671 17333 21371 NC_000014.9 velvet.61314 99.93 True fake: scaffold gap size wrong estimation (local) 26536023 26546764 22031 33598 NC_000014.9 velvet.61314 99.94 True fake: scaffold gap size wrong estimation (local) 26546999 26549106 34536 36657 NC_000014.9 velvet.61314 99.95 True fake: scaffold gap size wrong estimation (local) 26549365 26553990 37642 42267 NC_000014.9 velvet.61314 99.94 True fake: scaffold gap size wrong estimation (local) 26554218 26561072 43279 50907 NC_000014.9 velvet.61314 99.91 True fake: scaffold gap size wrong estimation (local) 26561165 26567312 51073 57220 NC_000014.9 velvet.61314 99.92 True fake: scaffold gap size wrong estimation (local) 26567446 26570159 58099 60812 NC_000014.9 velvet.61314 99.96 True fake: scaffold gap size wrong estimation (local) 26570418 26574041 61796 65519 NC_000014.9 velvet.61314 97.29 True fake: scaffold gap size wrong estimation (local) 26574965 26576246 67350 68631 NC_000014.9 velvet.61314 99.77 True local misassembly 26576701 26578364 68632 70295 NC_000014.9 velvet.61314 99.94 True indel: indel (> 5bp) 26578377 26579034 70296 70953 NC_000014.9 velvet.61314 98.48 True fake: scaffold gap size wrong estimation (local) 26579319 26598017 72056 91754 NC_000014.9 velvet.61314 99.92 True fake: scaffold gap size wrong estimation (local) 26598175 26616163 92643 111092 NC_000014.9 velvet.61314 99.72 True fake: scaffold gap size wrong estimation (local) 26635301 26638681 128000 131529 NC_000014.9 velvet.61314 99.85 True relocation, scaffold gap is present, inconsistency = -45003 26616198 26619636 154049 157481 NC_000014.9 velvet.61314 99.47 True relocation, scaffold gap is present, inconsistency = 23910 26645345 26646025 159280 159960 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 26646174 26650995 160913 165813 NC_000014.9 velvet.61314 98.51 True relocation, scaffold gap is present, inconsistency = 4239641 22378661 22406522 193695 165824 NC_000014.9 velvet.61314 99.77 True inversion, scaffold gap is present 22406833 22410954 194996 199215 NC_000014.9 velvet.61314 96.87 True fake: scaffold gap size wrong estimation (local) 22411095 22413264 199900 202069 NC_000014.9 velvet.61314 99.82 True local misassembly 22413265 22415651 202663 205049 NC_000014.9 velvet.61314 99.83 True fake: scaffold gap size wrong estimation (local) 22444399 22446947 229052 231600 NC_000014.9 velvet.61314 99.92 True relocation, scaffold gap is present, inconsistency = 4217447 26666333 26671923 233539 239110 NC_000014.9 velvet.61314 97.81 True fake: scaffold gap size wrong estimation (local) 26672201 26673329 239887 241015 NC_000014.9 velvet.61314 99.91 True fake: scaffold gap size wrong estimation (local) 26682441 26684169 247116 248927 NC_000014.9 velvet.61314 96.26 True fake: scaffold gap size wrong estimation (local) 26695209 26695796 256619 257206 NC_000014.9 velvet.61314 99.83 True fake: scaffold gap size wrong estimation (local) 26696463 26700832 258690 263103 NC_000014.9 velvet.61314 98.62 True fake: scaffold gap size wrong estimation (local) 26701212 26706551 263463 269475 NC_000014.9 velvet.61314 99.44 True fake: scaffold gap size wrong estimation (local) 26706826 26710119 270551 273844 NC_000014.9 velvet.61314 99.79 True fake: scaffold gap size wrong estimation (local) 26710323 26713009 274843 277529 NC_000014.9 velvet.61314 99.59 True fake: scaffold gap size wrong estimation (local) 26732607 26734855 291620 293768 NC_000014.9 velvet.61314 95.09 True fake: scaffold gap size wrong estimation (local) 26734992 26735554 294663 295224 NC_000014.9 velvet.61314 99.64 True relocation, scaffold gap is present, inconsistency = 4375193 22358944 22359466 296079 295557 NC_000014.9 velvet.61314 99.81 True fake: scaffold gap size wrong estimation (local) 22355307 22358707 300486 297056 NC_000014.9 velvet.61314 98.81 True relocation, scaffold gap is present, inconsistency = -23346 22374502 22378642 304637 300497 NC_000014.9 velvet.61314 99.81 True fake: not a misassembly (possible transposable element) 26727308 26732215 304744 309647 NC_000014.9 velvet.61314 99.82 True fake: not a misassembly (possible transposable element) 22360090 22364806 314528 309805 NC_000014.9 velvet.61314 99.92 True relocation, scaffold gap is present, inconsistency = 4319373 26684190 26687958 314539 318299 NC_000014.9 velvet.61314 99.71 True fake: scaffold gap size wrong estimation (local) 26689556 26693363 320574 324381 NC_000014.9 velvet.61314 99.92 True fake: scaffold gap size wrong estimation (local) 26693558 26694184 325509 326135 NC_000014.9 velvet.61314 99.84 True local misassembly 26694292 26695187 326136 327031 NC_000014.9 velvet.61314 98.77 True fake: not a misassembly (possible transposable element) 22325627 22327169 329398 327856 NC_000014.9 velvet.61314 100.0 True fake: not a misassembly (possible transposable element) 26713628 26720545 344453 351371 NC_000014.9 velvet.61314 99.73 True fake: scaffold gap size wrong estimation (local) 26720654 26724417 352256 356019 NC_000014.9 velvet.61314 99.73 True relocation, scaffold gap is present, inconsistency = -12531 26713081 26713591 357214 357725 NC_000014.9 velvet.61314 99.8 True fake: scaffold gap size wrong estimation (local) 26735992 26752147 377314 393137 NC_000014.9 velvet.61314 96.85 True fake: scaffold gap size wrong estimation (local) 26752402 26755057 394105 396846 NC_000014.9 velvet.61314 99.81 True fake: scaffold gap size wrong estimation (local) 26755183 26756452 397415 398684 NC_000014.9 velvet.61314 99.92 True fake: scaffold gap size wrong estimation (local) 26756772 26758293 399392 400913 NC_000014.9 velvet.61314 99.8 True fake: scaffold gap size wrong estimation (local) 26758294 26759614 401578 402898 NC_000014.9 velvet.61314 98.79 True indel: indel (<= 5bp) 26759893 26762449 403175 405731 NC_000014.9 velvet.61314 99.61 True fake: scaffold gap size wrong estimation (local) 26762780 26763322 406321 406863 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 26763464 26768258 407645 412439 NC_000014.9 velvet.61314 99.94 True fake: scaffold gap size wrong estimation (local) 26769066 26769842 414045 414821 NC_000014.9 velvet.61314 100.0 True indel: indel (<= 5bp) 26769848 26771567 414822 416541 NC_000014.9 velvet.61314 99.42 True fake: scaffold gap size wrong estimation (local) 26771891 26772728 417045 417882 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 26773018 26773543 418769 419294 NC_000014.9 velvet.61314 99.81 True fake: scaffold gap size wrong estimation (local) 26773819 26777263 419507 423719 NC_000014.9 velvet.61314 99.91 True fake: scaffold gap size wrong estimation (local) 26778590 26790424 425821 438429 NC_000014.9 velvet.61314 99.77 True fake: scaffold gap size wrong estimation (local) 26790691 26798563 439572 447651 NC_000014.9 velvet.61314 99.9 True fake: scaffold gap size wrong estimation (extensive) 26807542 26809761 447662 449879 NC_000014.9 velvet.61314 99.86 True relocation, scaffold gap is present, inconsistency = -10601 26799980 26806970 450699 458754 NC_000014.9 velvet.61314 99.57 True fake: scaffold gap size wrong estimation (local) 26810034 26813653 458765 462436 NC_000014.9 velvet.61314 99.92 True fake: scaffold gap size wrong estimation (local) 26813938 26828290 463080 478826 NC_000014.9 velvet.61314 99.81 True fake: scaffold gap size wrong estimation (local) 26828544 26843364 479860 495230 NC_000014.9 velvet.61314 99.86 True fake: scaffold gap size wrong estimation (local) 26843661 26849815 496276 502423 NC_000014.9 velvet.61314 99.82 True fake: scaffold gap size wrong estimation (local) 26850699 26854694 504105 508104 NC_000014.9 velvet.61314 99.9 True fake: scaffold gap size wrong estimation (local) 26859044 26864102 509196 514254 NC_000014.9 velvet.61314 99.88 True fake: scaffold gap size wrong estimation (local) 26865358 26878096 516295 529838 NC_000014.9 velvet.61314 99.91 True fake: scaffold gap size wrong estimation (local) 26878317 26879739 530727 532211 NC_000014.9 velvet.61314 99.86 True fake: scaffold gap size wrong estimation (local) 26879974 26880820 532587 533433 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 26881108 26885615 534353 538867 NC_000014.9 velvet.61314 99.78 True fake: scaffold gap size wrong estimation (local) 26885891 26906848 539552 562244 NC_000014.9 velvet.61314 99.6 True fake: scaffold gap size wrong estimation (local) 26907330 26917495 563483 574818 NC_000014.9 velvet.61314 99.85 True fake: scaffold gap size wrong estimation (local) 26917848 26941906 575745 601405 NC_000014.9 velvet.61314 99.9 True fake: scaffold gap size wrong estimation (local) 26942912 26949483 603210 610552 NC_000014.9 velvet.61314 99.83 True fake: scaffold gap size wrong estimation (local) 26950910 26957240 612769 619100 NC_000014.9 velvet.61314 99.84 True fake: scaffold gap size wrong estimation (local) 26957342 26958844 619700 621307 NC_000014.9 velvet.61314 99.66 True fake: scaffold gap size wrong estimation (local) 26959110 26962666 621985 625541 NC_000014.9 velvet.61314 99.89 True fake: scaffold gap size wrong estimation (local) 26962861 26968630 626508 632269 NC_000014.9 velvet.61314 99.64 True relocation, scaffold gap is present, inconsistency = 12178330 39170865 39171569 656174 656878 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 39172817 39173764 658293 659240 NC_000014.9 velvet.61314 99.89 True fake: scaffold gap size wrong estimation (local) 39173964 39174483 659596 660115 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 39174735 39178275 660911 664448 NC_000014.9 velvet.61314 99.86 True relocation, scaffold gap is present, inconsistency = -12210263 26968928 26969880 665364 666316 NC_000014.9 velvet.61314 99.9 True fake: scaffold gap size wrong estimation (local) 26970164 26971105 666463 667404 NC_000014.9 velvet.61314 99.89 True fake: scaffold gap size wrong estimation (local) 26971402 26982021 668568 679235 NC_000014.9 velvet.61314 99.63 True fake: scaffold gap size wrong estimation (local) 26982204 26985971 680003 683770 NC_000014.9 velvet.61314 99.81 True fake: scaffold gap size wrong estimation (local) 26986083 26993191 684667 691775 NC_000014.9 velvet.61314 99.94 True fake: scaffold gap size wrong estimation (local) 26993390 27000894 692778 700285 NC_000014.9 velvet.61314 99.85 True fake: scaffold gap size wrong estimation (local) 27001179 27009286 701387 710107 NC_000014.9 velvet.61314 97.52 True fake: scaffold gap size wrong estimation (local) 27009536 27022448 711085 724007 NC_000014.9 velvet.61314 99.36 True fake: scaffold gap size wrong estimation (local) 27022713 27025291 724637 727180 NC_000014.9 velvet.61314 98.14 True fake: scaffold gap size wrong estimation (local) 27025463 27028968 728146 731643 NC_000014.9 velvet.61314 99.69 True fake: scaffold gap size wrong estimation (local) 27029283 27030219 732523 733459 NC_000014.9 velvet.61314 100.0 True relocation, scaffold gap is present, inconsistency = 16772383 43803436 43804575 735494 734293 NC_000014.9 velvet.61314 99.34 True inversion, scaffold gap is present 43805245 43806567 735743 737071 NC_000014.9 velvet.61314 99.47 True fake: scaffold gap size wrong estimation (local) 43807665 43808449 737540 738324 NC_000014.9 velvet.61314 98.98 True relocation, scaffold gap is present, inconsistency = -4608349 39200111 39201017 738335 739240 NC_000014.9 velvet.61314 99.89 True fake: scaffold gap size wrong estimation (extensive) 39208602 39209498 739651 740547 NC_000014.9 velvet.61314 98.89 True relocation, scaffold gap is present, inconsistency = 4596694 43808471 43811786 742826 746244 NC_000014.9 velvet.61314 99.82 True fake: scaffold gap size wrong estimation (local) 43812599 43814336 747837 749574 NC_000014.9 velvet.61314 99.94 True relocation, scaffold gap is present, inconsistency = -16784061 27030572 27031102 749871 750401 NC_000014.9 velvet.61314 98.12 True fake: not a misassembly (possible transposable element) 43823891 43826037 750412 752545 NC_000014.9 velvet.61314 98.78 True fake: not a misassembly (possible transposable element) 27031118 27033821 752745 755448 NC_000014.9 velvet.61314 99.82 True fake: scaffold gap size wrong estimation (local) 27034108 27034948 756797 757637 NC_000014.9 velvet.61314 100.0 True relocation, scaffold gap is present, inconsistency = 16793796 43829585 43831536 758478 760428 NC_000014.9 velvet.61314 99.9 True relocation, scaffold gap is present, inconsistency = -4596707 39238832 39242337 764431 768562 NC_000014.9 velvet.61314 99.91 True relocation, scaffold gap is present, inconsistency = -12195277 27048194 27052253 769696 773810 NC_000014.9 velvet.61314 99.98 True fake: scaffold gap size wrong estimation (local) 27054642 27055964 776970 778292 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 27056223 27060941 779305 784104 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 27061329 27068606 785223 795753 NC_000014.9 velvet.61314 98.49 True fake: scaffold gap size wrong estimation (local) 27068963 27087634 796833 817793 NC_000014.9 velvet.61314 99.61 True fake: scaffold gap size wrong estimation (local) 27087928 27089228 818456 819898 NC_000014.9 velvet.61314 99.84 True relocation, scaffold gap is present, inconsistency = 59430 27148669 27150168 821413 819909 NC_000014.9 velvet.61314 99.47 True fake: scaffold gap size wrong estimation (local) 27137673 27138338 828425 827760 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 27126865 27137200 840090 829538 NC_000014.9 velvet.61314 99.89 True fake: scaffold gap size wrong estimation (local) 27122872 27126607 844861 841176 NC_000014.9 velvet.61314 98.47 True fake: scaffold gap size wrong estimation (local) 27121627 27122212 846083 845498 NC_000014.9 velvet.61314 96.93 True local misassembly 27120604 27121401 846881 846084 NC_000014.9 velvet.61314 98.62 True relocation, scaffold gap is present, inconsistency = 7631 27108021 27112733 847121 851891 NC_000014.9 velvet.61314 99.87 True fake: scaffold gap size wrong estimation (local) 27113183 27113784 855559 856158 NC_000014.9 velvet.61314 99.34 True relocation, scaffold gap is present, inconsistency = -24545 27089250 27097357 856169 864366 NC_000014.9 velvet.61314 99.88 True fake: scaffold gap size wrong estimation (local) 27097434 27103318 865197 871139 NC_000014.9 velvet.61314 99.91 True fake: scaffold gap size wrong estimation (local) 27103866 27107673 872234 876460 NC_000014.9 velvet.61314 99.79 True relocation, scaffold gap is present, inconsistency = 11138 27119031 27119597 877250 876680 NC_000014.9 velvet.61314 98.93 True fake: scaffold gap size wrong estimation (local) 27116608 27117185 880462 879885 NC_000014.9 velvet.61314 99.65 True fake: not a misassembly (possible transposable element) 27115370 27116576 881379 882585 NC_000014.9 velvet.61314 99.67 True fake: not a misassembly (possible transposable element) 27113773 27115309 884132 882597 NC_000014.9 velvet.61314 99.61 True inversion, scaffold gap is present 27117224 27117935 884143 884854 NC_000014.9 velvet.61314 99.72 True relocation, scaffold gap is present, inconsistency = -5190072 21928351 21929562 885342 886552 NC_000014.9 velvet.61314 99.59 True fake: scaffold gap size wrong estimation (local) 21929733 21938762 887383 896368 NC_000014.9 velvet.61314 99.35 True relocation, scaffold gap is present, inconsistency = 160008 21766253 21769714 899842 896379 NC_000014.9 velvet.61314 99.25 True relocation, scaffold gap is present, inconsistency = -7907 21769746 21772446 904219 901556 NC_000014.9 velvet.61314 98.37 True relocation, scaffold gap is present, inconsistency = 172838 21945295 21950051 904230 909720 NC_000014.9 velvet.61314 99.92 True fake: not a misassembly (possible transposable element) 27138368 27143852 909731 915212 NC_000014.9 velvet.61314 99.76 True fake: not a misassembly (possible transposable element) 21950368 21953298 915223 918153 NC_000014.9 velvet.61314 99.83 True relocation, scaffold gap is present, inconsistency = 5190725 27144034 27145629 918164 919759 NC_000014.9 velvet.61314 99.75 True fake: scaffold gap size wrong estimation (local) 27145878 27146431 921163 921716 NC_000014.9 velvet.61314 97.83 True relocation, scaffold gap is present, inconsistency = 5388613 21743265 21745812 935720 933169 NC_000014.9 velvet.61314 99.49 True fake: scaffold gap size wrong estimation (local) 21734306 21742956 945429 936778 NC_000014.9 velvet.61314 99.78 True fake: scaffold gap size wrong estimation (local) 21731419 21734030 949140 946541 NC_000014.9 velvet.61314 99.31 True fake: scaffold gap size wrong estimation (local) 21726248 21730781 954231 949701 NC_000014.9 velvet.61314 99.6 True fake: scaffold gap size wrong estimation (local) 21715915 21725962 966200 955233 NC_000014.9 velvet.61314 99.61 True relocation, scaffold gap is present, inconsistency = -50207538 71891689 71894153 997964 995500 NC_000014.9 velvet.61314 99.63 True relocation, scaffold gap is present, inconsistency = -9140 71898875 71900818 999918 997975 NC_000014.9 velvet.61314 99.85 True relocation, scaffold gap is present, inconsistency = 50184055 21713534 21714319 1001204 1000419 NC_000014.9 velvet.61314 99.87 True fake: scaffold gap size wrong estimation (local) 21707705 21710867 1007301 1004139 NC_000014.9 velvet.61314 99.97 True fake: scaffold gap size wrong estimation (local) 21702240 21707481 1013498 1008257 NC_000014.9 velvet.61314 99.96 True fake: scaffold gap size wrong estimation (local) 21698582 21701845 1017921 1014664 NC_000014.9 velvet.61314 99.6 True fake: scaffold gap size wrong estimation (local) 21693394 21697437 1023800 1019757 NC_000014.9 velvet.61314 99.51 True fake: scaffold gap size wrong estimation (local) 21689967 21693020 1027989 1024944 NC_000014.9 velvet.61314 99.54 True relocation, scaffold gap is present, inconsistency = 68187870 89882767 89883934 1029866 1031033 NC_000014.9 velvet.61314 99.91 True relocation, scaffold gap is present, inconsistency = 17983029 71897992 71898518 1032779 1032253 NC_000014.9 velvet.61314 99.81 True relocation, scaffold gap is present, inconsistency = 50210154 21685801 21687827 1034816 1032790 NC_000014.9 velvet.61314 99.85 True fake: scaffold gap size wrong estimation (local) 21682519 21685511 1038872 1035840 NC_000014.9 velvet.61314 99.87 True relocation, scaffold gap is present, inconsistency = -50210217 71862031 71865543 1069668 1066065 NC_000014.9 velvet.61314 98.98 True fake: scaffold gap size wrong estimation (local) 71859116 71859688 1073134 1072562 NC_000014.9 velvet.61314 99.13 True fake: scaffold gap size wrong estimation (local) 71855057 71856314 1077531 1076274 NC_000014.9 velvet.61314 99.6 True fake: scaffold gap size wrong estimation (local) 71854050 71854931 1079406 1078525 NC_000014.9 velvet.61314 96.71 True local misassembly 71853246 71853795 1079956 1079407 NC_000014.9 velvet.61314 100.0 True relocation, scaffold gap is present, inconsistency = 38698823 33143493 33144545 1090886 1089834 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 33142192 33142826 1092838 1092204 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 33139934 33142191 1095154 1092897 NC_000014.9 velvet.61314 99.11 True relocation, inconsistency = -7605 33144548 33147538 1098145 1095155 NC_000014.9 velvet.61314 99.73 True local misassembly 33138222 33139933 1099857 1098146 NC_000014.9 velvet.61314 99.12 True fake: scaffold gap size wrong estimation (local) 33136331 33138034 1102359 1100656 NC_000014.9 velvet.61314 99.77 True fake: scaffold gap size wrong estimation (local) 33134878 33136046 1104345 1103177 NC_000014.9 velvet.61314 99.83 True relocation, scaffold gap is present, inconsistency = -38752030 71881724 71886881 1109527 1104372 NC_000014.9 velvet.61314 99.71 True relocation, scaffold gap is present, inconsistency = 15479358 87381837 87386091 1125125 1129378 NC_000014.9 velvet.61314 99.55 True relocation, scaffold gap is present, inconsistency = 2532220 89918573 89919215 1129640 1130282 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 89924026 89925662 1131246 1132882 NC_000014.9 velvet.61314 99.57 True fake: scaffold gap size wrong estimation (local) 89926056 89927089 1133935 1134968 NC_000014.9 velvet.61314 99.81 True relocation, scaffold gap is present, inconsistency = -7861 89919239 89920779 1134979 1136519 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 89921095 89923997 1137585 1140487 NC_000014.9 velvet.61314 99.86 True relocation, scaffold gap is present, inconsistency = -2545417 87378591 87381742 1140498 1143649 NC_000014.9 velvet.61314 99.97 True fake: scaffold gap size wrong estimation (local) 87386341 87413724 1143664 1171872 NC_000014.9 velvet.61314 98.36 True fake: scaffold gap size wrong estimation (local) 87419523 87423340 1179318 1183199 NC_000014.9 velvet.61314 98.25 True fake: scaffold gap size wrong estimation (local) 87436209 87442048 1191914 1197753 NC_000014.9 velvet.61314 99.9 True relocation, scaffold gap is present, inconsistency = 24876427 62557585 62559771 1199950 1197764 NC_000014.9 velvet.61314 99.91 True relocation, scaffold gap is present, inconsistency = -9315300 71866309 71872648 1207336 1200187 NC_000014.9 velvet.61314 99.63 True fake: scaffold gap size wrong estimation (local) 71839376 71840585 1232592 1231383 NC_000014.9 velvet.61314 99.83 True fake: scaffold gap size wrong estimation (local) 71832292 71833857 1234168 1232603 NC_000014.9 velvet.61314 100.0 True local misassembly 71835188 71836575 1235566 1234179 NC_000014.9 velvet.61314 100.0 True local misassembly 71838337 71838841 1236081 1235577 NC_000014.9 velvet.61314 98.02 True local misassembly 71837201 71838100 1236981 1236082 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 71829406 71832014 1239610 1237002 NC_000014.9 velvet.61314 99.85 True fake: scaffold gap size wrong estimation (local) 71827711 71829138 1242004 1240521 NC_000014.9 velvet.61314 99.86 True fake: scaffold gap size wrong estimation (local) 71824157 71827435 1246404 1242664 NC_000014.9 velvet.61314 99.97 True fake: not a misassembly (possible transposable element) 71834528 71835166 1247053 1246415 NC_000014.9 velvet.61314 100.0 True fake: not a misassembly (possible transposable element) 71817600 71818371 1252042 1251271 NC_000014.9 velvet.61314 98.19 True local misassembly 71816396 71817162 1252809 1252043 NC_000014.9 velvet.61314 99.87 True fake: scaffold gap size wrong estimation (local) 71811661 71813770 1258352 1256243 NC_000014.9 velvet.61314 99.95 True relocation, scaffold gap is present, inconsistency = -7623 71818651 71819273 1258985 1258363 NC_000014.9 velvet.61314 100.0 True fake: not a misassembly (possible transposable element) 71745685 71746961 1262613 1261337 NC_000014.9 velvet.61314 100.0 True fake: not a misassembly (possible transposable element) 71814758 71816382 1264251 1262627 NC_000014.9 velvet.61314 99.82 True relocation, scaffold gap is present, inconsistency = 66014 71742410 71745417 1267578 1270585 NC_000014.9 velvet.61314 99.9 True inversion, scaffold gap is present 71736354 71742336 1276639 1270596 NC_000014.9 velvet.61314 99.97 True relocation, scaffold gap is present, inconsistency = 17158 71759505 71760629 1276650 1277748 NC_000014.9 velvet.61314 97.24 True fake: scaffold gap size wrong estimation (local) 71761967 71763695 1279756 1281484 NC_000014.9 velvet.61314 99.94 True relocation, scaffold gap is present, inconsistency = 39215 71720511 71722741 1283716 1281495 NC_000014.9 velvet.61314 99.55 True fake: scaffold gap size wrong estimation (local) 71719757 71720298 1285153 1284612 NC_000014.9 velvet.61314 99.82 True relocation, scaffold gap is present, inconsistency = 37326099 34364955 34366301 1313856 1312510 NC_000014.9 velvet.61314 99.85 True fake: scaffold gap size wrong estimation (local) 34362620 34364714 1316809 1314714 NC_000014.9 velvet.61314 99.9 True relocation, scaffold gap is present, inconsistency = -11129 34372333 34373738 1318225 1316820 NC_000014.9 velvet.61314 99.57 True relocation, scaffold gap is present, inconsistency = 37424680 71798429 71800377 1318236 1320226 NC_000014.9 velvet.61314 99.84 True fake: scaffold gap size wrong estimation (local) 71800623 71801993 1321398 1322768 NC_000014.9 velvet.61314 99.85 True relocation, scaffold gap is present, inconsistency = 50212900 21584802 21587712 1325727 1322779 NC_000014.9 velvet.61314 99.72 True relocation, scaffold gap is present, inconsistency = 50173092 71763929 71765744 1328852 1330667 NC_000014.9 velvet.61314 99.89 True relocation, scaffold gap is present, inconsistency = 70571 71691470 71693347 1332555 1330678 NC_000014.9 velvet.61314 99.95 True fake: scaffold gap size wrong estimation (local) 71686658 71691327 1338281 1333563 NC_000014.9 velvet.61314 98.88 True relocation, scaffold gap is present, inconsistency = 50093940 21581976 21583022 1349014 1347977 NC_000014.9 velvet.61314 99.13 True fake: not a misassembly (possible transposable element) 71778998 71781509 1351536 1349025 NC_000014.9 velvet.61314 99.96 True fake: not a misassembly (possible transposable element) 21578413 21579243 1353504 1352674 NC_000014.9 velvet.61314 100.0 True relocation, scaffold gap is present, inconsistency = 50203091 71782345 71790520 1353515 1362335 NC_000014.9 velvet.61314 99.78 True relocation, scaffold gap is present, inconsistency = -81492 71709039 71710552 1362346 1363859 NC_000014.9 velvet.61314 99.93 True relocation, scaffold gap is present, inconsistency = 12463 71723026 71729074 1363870 1369918 NC_000014.9 velvet.61314 99.97 True fake: scaffold gap size wrong estimation (local) 71729339 71732958 1370972 1374591 NC_000014.9 velvet.61314 100.0 True relocation, scaffold gap is present, inconsistency = -18353 71714616 71716970 1374602 1376956 NC_000014.9 velvet.61314 99.96 True fake: scaffold gap size wrong estimation (local) 71717199 71719036 1377944 1379781 NC_000014.9 velvet.61314 100.0 True relocation, scaffold gap is present, inconsistency = 14155 71733202 71736152 1379792 1382742 NC_000014.9 velvet.61314 100.0 True relocation, scaffold gap is present, inconsistency = 50104455 21627463 21628376 1384026 1383113 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 21626572 21627184 1385802 1385190 NC_000014.9 velvet.61314 98.21 True local misassembly 21624848 21626314 1387269 1385803 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 21623747 21624607 1388837 1387977 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 21620936 21623452 1392238 1389725 NC_000014.9 velvet.61314 99.68 True fake: scaffold gap size wrong estimation (local) 21617295 21620653 1395903 1392546 NC_000014.9 velvet.61314 98.1 True relocation, scaffold gap is present, inconsistency = 50122772 71747268 71748816 1399746 1401294 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 71748929 71751510 1402094 1404675 NC_000014.9 velvet.61314 99.96 True fake: scaffold gap size wrong estimation (local) 71751605 71753673 1404718 1407499 NC_000014.9 velvet.61314 99.8 True fake: scaffold gap size wrong estimation (local) 71754022 71755071 1408516 1409565 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 71755301 71755950 1409880 1410529 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 71757299 71759118 1412696 1414515 NC_000014.9 velvet.61314 99.73 True relocation, scaffold gap is present, inconsistency = -41297644 30461485 30463303 1414526 1416344 NC_000014.9 velvet.61314 99.89 True fake: scaffold gap size wrong estimation (local) 30463491 30466391 1417359 1420259 NC_000014.9 velvet.61314 99.93 True fake: scaffold gap size wrong estimation (local) 30467107 30472748 1421673 1427409 NC_000014.9 velvet.61314 99.44 True fake: scaffold gap size wrong estimation (local) 30473030 30474073 1428446 1429489 NC_000014.9 velvet.61314 99.9 True fake: scaffold gap size wrong estimation (local) 30480138 30487920 1435887 1443798 NC_000014.9 velvet.61314 99.65 True fake: scaffold gap size wrong estimation (local) 30488203 30491624 1444812 1448231 NC_000014.9 velvet.61314 99.88 True relocation, scaffold gap is present, inconsistency = 41299752 71791387 71792182 1448242 1449006 NC_000014.9 velvet.61314 95.93 True fake: scaffold gap size wrong estimation (local) 71792959 71794324 1450725 1452090 NC_000014.9 velvet.61314 99.19 True local misassembly 71794577 71795119 1452091 1452633 NC_000014.9 velvet.61314 98.16 True fake: scaffold gap size wrong estimation (local) 71795120 71796377 1452723 1453980 NC_000014.9 velvet.61314 98.65 True local misassembly 71796519 71797266 1453981 1454728 NC_000014.9 velvet.61314 98.66 True fake: scaffold gap size wrong estimation (local) 71797568 71798153 1455801 1456386 NC_000014.9 velvet.61314 100.0 True relocation, scaffold gap is present, inconsistency = 37386228 34410487 34411263 1457218 1456463 NC_000014.9 velvet.61314 97.13 True fake: scaffold gap size wrong estimation (local) 34408665 34410250 1460408 1458823 NC_000014.9 velvet.61314 100.0 True relocation, scaffold gap is present, inconsistency = 37355635 71765896 71767333 1460419 1461856 NC_000014.9 velvet.61314 99.93 True fake: scaffold gap size wrong estimation (local) 71767603 71769920 1462722 1465039 NC_000014.9 velvet.61314 99.96 True fake: scaffold gap size wrong estimation (local) 71770246 71771654 1466216 1467624 NC_000014.9 velvet.61314 99.93 True fake: scaffold gap size wrong estimation (local) 71772589 71774252 1469026 1470689 NC_000014.9 velvet.61314 100.0 True indel: indel (> 5bp) 71774253 71774991 1470698 1471436 NC_000014.9 velvet.61314 99.73 True local misassembly 71775307 71776090 1471437 1472220 NC_000014.9 velvet.61314 98.72 True relocation, scaffold gap is present, inconsistency = 15776577 55993312 55994078 1477638 1476872 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 55959430 55965397 1511880 1505972 NC_000014.9 velvet.61314 99.01 True fake: scaffold gap size wrong estimation (local) 55955281 55959286 1516871 1512866 NC_000014.9 velvet.61314 100.0 True relocation, scaffold gap is present, inconsistency = 34363947 21588015 21590080 1520199 1518125 NC_000014.9 velvet.61314 99.9 True relocation, scaffold gap is present, inconsistency = -31416734 53003506 53004718 1521433 1520230 NC_000014.9 velvet.61314 99.09 True fake: scaffold gap size wrong estimation (local) 53000819 53003232 1524560 1522147 NC_000014.9 velvet.61314 99.75 True relocation, scaffold gap is present, inconsistency = 10865 52977515 52978857 1536999 1535657 NC_000014.9 velvet.61314 99.93 True relocation, scaffold gap is present, inconsistency = 30972434 22001022 22005062 1537018 1541698 NC_000014.9 velvet.61314 99.95 True fake: scaffold gap size wrong estimation (local) 22007114 22014974 1544468 1552503 NC_000014.9 velvet.61314 99.88 True fake: scaffold gap size wrong estimation (local) 22015384 22021370 1553683 1559669 NC_000014.9 velvet.61314 99.97 True fake: not a misassembly (possible transposable element) 52933750 52936925 1559952 1563127 NC_000014.9 velvet.61314 99.94 True fake: not a misassembly (possible transposable element) 22028575 22032707 1563138 1567289 NC_000014.9 velvet.61314 98.97 True fake: scaffold gap size wrong estimation (extensive) 22033797 22034492 1577031 1577726 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 22034834 22050087 1578479 1594165 NC_000014.9 velvet.61314 99.91 True fake: scaffold gap size wrong estimation (local) 22051493 22052300 1594746 1595553 NC_000014.9 velvet.61314 99.63 True local misassembly 22050090 22050654 1595576 1596140 NC_000014.9 velvet.61314 99.29 True relocation, scaffold gap is present, inconsistency = -64403 21986262 21992187 1596151 1603190 NC_000014.9 velvet.61314 99.93 True fake: scaffold gap size wrong estimation (local) 21992450 22000736 1604246 1612612 NC_000014.9 velvet.61314 100.0 True relocation, scaffold gap is present, inconsistency = 53976 22054723 22058815 1617481 1612623 NC_000014.9 velvet.61314 98.1 True inversion, scaffold gap is present 22053499 22054453 1617492 1618446 NC_000014.9 velvet.61314 99.9 True fake: scaffold gap size wrong estimation (local) 22059763 22063406 1618457 1622657 NC_000014.9 velvet.61314 99.61 True fake: scaffold gap size wrong estimation (local) 22063699 22064369 1623422 1624092 NC_000014.9 velvet.61314 100.0 True relocation, scaffold gap is present, inconsistency = 18597 22025514 22028485 1643680 1640709 NC_000014.9 velvet.61314 99.93 True fake: scaffold gap size wrong estimation (local) 22021372 22025241 1648577 1644708 NC_000014.9 velvet.61314 99.97 True fake: scaffold gap size wrong estimation (extensive) 21982669 21983466 1679078 1678281 NC_000014.9 velvet.61314 99.87 True fake: scaffold gap size wrong estimation (local) 21979010 21982392 1683623 1680240 NC_000014.9 velvet.61314 99.82 True relocation, scaffold gap is present, inconsistency = 82104 22064507 22074368 1683634 1695364 NC_000014.9 velvet.61314 99.83 True relocation, scaffold gap is present, inconsistency = 60401126 82475512 82482755 1702620 1695382 NC_000014.9 velvet.61314 99.85 True fake: not a misassembly (possible transposable element) 22083296 22087972 1703871 1708548 NC_000014.9 velvet.61314 99.89 True fake: not a misassembly (possible transposable element) 82470513 82472751 1710797 1708559 NC_000014.9 velvet.61314 100.0 True relocation, scaffold gap is present, inconsistency = 60379302 22088398 22091200 1710808 1713661 NC_000014.9 velvet.61314 99.96 True relocation, scaffold gap is present, inconsistency = -17060 22074637 22081982 1714158 1721495 NC_000014.9 velvet.61314 99.37 True fake: scaffold gap size wrong estimation (local) 22094984 22100683 1733689 1739387 NC_000014.9 velvet.61314 99.86 True fake: scaffold gap size wrong estimation (local) 22100948 22103120 1740438 1742610 NC_000014.9 velvet.61314 99.91 True fake: scaffold gap size wrong estimation (local) 22103469 22109075 1743604 1749211 NC_000014.9 velvet.61314 99.91 True fake: scaffold gap size wrong estimation (local) 22109283 22110529 1749949 1751195 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 22111174 22115361 1752242 1756955 NC_000014.9 velvet.61314 99.9 True fake: scaffold gap size wrong estimation (local) 22115552 22117776 1757503 1759727 NC_000014.9 velvet.61314 99.91 True fake: scaffold gap size wrong estimation (local) 22119996 22121784 1759738 1761526 NC_000014.9 velvet.61314 99.72 True fake: scaffold gap size wrong estimation (local) 22122080 22127684 1762238 1768480 NC_000014.9 velvet.61314 99.8 True relocation, scaffold gap is present, inconsistency = 76880330 99008025 99009285 1769751 1768491 NC_000014.9 velvet.61314 99.92 True relocation, scaffold gap is present, inconsistency = 76888059 22117808 22119955 1769762 1771909 NC_000014.9 velvet.61314 99.58 True relocation, scaffold gap is present, inconsistency = 60312163 82432131 82454915 1771922 1795777 NC_000014.9 velvet.61314 99.28 True fake: not a misassembly (possible transposable element) 22092471 22094949 1800520 1798042 NC_000014.9 velvet.61314 99.92 True fake: not a misassembly (possible transposable element) 82455085 82456926 1802807 1804695 NC_000014.9 velvet.61314 99.89 True fake: scaffold gap size wrong estimation (local) 82457202 82457848 1805371 1806017 NC_000014.9 velvet.61314 100.0 True relocation, scaffold gap is present, inconsistency = 16517821 98975680 98979615 1809934 1806028 NC_000014.9 velvet.61314 99.11 True fake: scaffold gap size wrong estimation (local) 98971051 98975393 1816224 1811018 NC_000014.9 velvet.61314 99.75 True fake: scaffold gap size wrong estimation (local) 98969581 98970772 1818108 1816539 NC_000014.9 velvet.61314 100.0 True relocation, scaffold gap is present, inconsistency = 5691891 93270698 93271734 1825100 1824064 NC_000014.9 velvet.61314 99.9 True fake: scaffold gap size wrong estimation (local) 93269029 93270101 1827324 1826252 NC_000014.9 velvet.61314 100.0 True fake: not a misassembly (possible transposable element) 53277356 53279754 1829733 1827335 NC_000014.9 velvet.61314 99.83 True fake: not a misassembly (possible transposable element) 93265892 93268753 1832605 1829744 NC_000014.9 velvet.61314 100.0 True relocation, scaffold gap is present, inconsistency = 10772812 82491366 82493059 1832626 1834319 NC_000014.9 velvet.61314 99.88 True relocation, scaffold gap is present, inconsistency = -9687 82483759 82490867 1834706 1841815 NC_000014.9 velvet.61314 99.99 True relocation, scaffold gap is present, inconsistency = 12740625 95231503 95242258 1841826 1852557 NC_000014.9 velvet.61314 99.73 True relocation, scaffold gap is present, inconsistency = 35805579 59419173 59425913 1859361 1852568 NC_000014.9 velvet.61314 99.85 True fake: scaffold gap size wrong estimation (local) 59415574 59418912 1863629 1860101 NC_000014.9 velvet.61314 95.75 True relocation, scaffold gap is present, inconsistency = 6134246 53280746 53281317 1864211 1863640 NC_000014.9 velvet.61314 99.65 True fake: scaffold gap size wrong estimation (local) 53271550 53276268 1872849 1868131 NC_000014.9 velvet.61314 99.83 True fake: scaffold gap size wrong estimation (local) 53243270 53243958 1898982 1898304 NC_000014.9 velvet.61314 97.35 True fake: scaffold gap size wrong estimation (local) 53238373 53242417 1904943 1900709 NC_000014.9 velvet.61314 99.95 True fake: scaffold gap size wrong estimation (local) 53234580 53237972 1909379 1905987 NC_000014.9 velvet.61314 99.97 True fake: scaffold gap size wrong estimation (local) 53210538 53211194 1934040 1933384 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 53208337 53209898 1936706 1935154 NC_000014.9 velvet.61314 99.16 True fake: scaffold gap size wrong estimation (local) 53201521 53202334 1937530 1936717 NC_000014.9 velvet.61314 98.65 True local misassembly 53207102 53208044 1938795 1937853 NC_000014.9 velvet.61314 98.73 True local misassembly 53206145 53206962 1939613 1938796 NC_000014.9 velvet.61314 98.66 True indel: indel (> 5bp) 53205478 53206110 1940246 1939614 NC_000014.9 velvet.61314 99.68 True fake: scaffold gap size wrong estimation (local) 53202343 53203221 1942809 1941931 NC_000014.9 velvet.61314 99.66 True fake: scaffold gap size wrong estimation (local) 53191690 53193487 1946676 1944879 NC_000014.9 velvet.61314 98.67 True fake: scaffold gap size wrong estimation (local) 53191163 53191689 1947955 1947429 NC_000014.9 velvet.61314 98.1 True relocation, inconsistency = -8363 53198418 53199525 1949063 1947956 NC_000014.9 velvet.61314 99.73 True relocation, scaffold gap is present, inconsistency = -24112 53212493 53216277 1959837 1955316 NC_000014.9 velvet.61314 98.96 True fake: scaffold gap size wrong estimation (local) 53211654 53212260 1960671 1960065 NC_000014.9 velvet.61314 100.0 True relocation, scaffold gap is present, inconsistency = -39291 53222209 53222786 1989407 1988830 NC_000014.9 velvet.61314 99.31 True fake: scaffold gap size wrong estimation (local) 53220991 53222072 1990646 1989565 NC_000014.9 velvet.61314 99.82 True fake: scaffold gap size wrong estimation (local) 53218731 53219519 1993795 1993006 NC_000014.9 velvet.61314 99.62 True relocation, scaffold gap is present, inconsistency = 18122088 71346204 71346984 1998392 1999172 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 71347252 71350159 2000253 2003160 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 71350410 71354297 2004178 2008064 NC_000014.9 velvet.61314 99.95 True fake: scaffold gap size wrong estimation (local) 71354625 71356489 2009186 2011050 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 71356881 71357807 2011931 2012857 NC_000014.9 velvet.61314 99.89 True fake: scaffold gap size wrong estimation (local) 71358153 71358695 2013467 2014009 NC_000014.9 velvet.61314 97.97 True fake: not a misassembly (possible transposable element) 100164614 100165981 2024897 2023530 NC_000014.9 velvet.61314 100.0 True fake: not a misassembly (possible transposable element) 71371680 71373059 2025409 2026788 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 71373886 71376515 2028451 2031127 NC_000014.9 velvet.61314 100.0 True relocation, scaffold gap is present, inconsistency = 18182167 53189561 53190088 2033285 2032758 NC_000014.9 velvet.61314 99.81 True fake: scaffold gap size wrong estimation (local) 53185409 53189260 2038232 2033579 NC_000014.9 velvet.61314 99.79 True fake: scaffold gap size wrong estimation (local) 53181873 53185071 2042841 2039258 NC_000014.9 velvet.61314 99.78 True fake: scaffold gap size wrong estimation (local) 53179567 53181484 2045652 2043733 NC_000014.9 velvet.61314 99.95 True inversion, scaffold gap is present 53176722 53177359 2045663 2046300 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 53177564 53178172 2046487 2047095 NC_000014.9 velvet.61314 99.84 True inversion, scaffold gap is present 53174232 53176676 2053902 2051459 NC_000014.9 velvet.61314 99.92 True fake: scaffold gap size wrong estimation (local) 53173087 53173601 2056068 2055554 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 53171577 53172368 2057287 2056496 NC_000014.9 velvet.61314 98.74 True local misassembly 53170553 53171290 2058025 2057288 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 53169647 53170552 2059228 2058323 NC_000014.9 velvet.61314 99.89 True fake: scaffold gap size wrong estimation (local) 53167024 53168354 2061579 2060249 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 53165817 53166840 2064021 2062998 NC_000014.9 velvet.61314 98.93 True relocation, scaffold gap is present, inconsistency = 16790972 36368938 36373116 2065750 2070723 NC_000014.9 velvet.61314 99.83 True fake: scaffold gap size wrong estimation (local) 36391464 36392394 2085325 2086255 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 36392672 36395171 2087336 2089835 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 36395661 36400387 2091095 2095821 NC_000014.9 velvet.61314 99.94 True relocation, scaffold gap is present, inconsistency = -12210 36388188 36391444 2095832 2099088 NC_000014.9 velvet.61314 99.94 True fake: scaffold gap size wrong estimation (extensive) 36401050 36403884 2099099 2101933 NC_000014.9 velvet.61314 99.93 True fake: scaffold gap size wrong estimation (local) 36404139 36407237 2103005 2106103 NC_000014.9 velvet.61314 99.9 True relocation, scaffold gap is present, inconsistency = 16724379 53134107 53134611 2109098 2108594 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 53133302 53133833 2110121 2109590 NC_000014.9 velvet.61314 99.81 True inversion, scaffold gap is present 53126662 53129953 2110575 2113816 NC_000014.9 velvet.61314 98.32 True fake: scaffold gap size wrong estimation (local) 53131546 53132181 2115762 2116397 NC_000014.9 velvet.61314 98.43 True fake: scaffold gap size wrong estimation (local) 53136127 53137190 2117679 2118743 NC_000014.9 velvet.61314 98.97 True fake: scaffold gap size wrong estimation (local) 53137627 53138162 2120288 2120823 NC_000014.9 velvet.61314 98.13 True local misassembly 53138445 53139089 2120824 2121468 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 53139090 53139623 2121510 2122043 NC_000014.9 velvet.61314 96.63 True fake: scaffold gap size wrong estimation (local) 53139722 53140290 2122335 2122937 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 53140541 53144989 2123742 2128303 NC_000014.9 velvet.61314 98.45 True fake: scaffold gap size wrong estimation (local) 53146527 53148344 2131274 2133069 NC_000014.9 velvet.61314 98.67 True fake: scaffold gap size wrong estimation (local) 53148616 53152745 2134159 2138288 NC_000014.9 velvet.61314 99.95 True fake: scaffold gap size wrong estimation (local) 53153245 53155179 2139616 2141550 NC_000014.9 velvet.61314 99.95 True fake: scaffold gap size wrong estimation (local) 53155912 53156571 2142975 2143634 NC_000014.9 velvet.61314 100.0 True fake: scaffold gap size wrong estimation (local) 53156868 53158308 2144957 2146397 NC_000014.9 velvet.61314 99.1 True fake: scaffold gap size wrong estimation (local) 53162788 53164954 2146889 2149017 NC_000014.9 velvet.61314 98.1 True CONTIG velvet.61314 2149017 misassembled 99661718 99663376 1 1659 NC_000014.9 velvet.61315 99.94 True relocation, scaffold gap is present, inconsistency = -76374858 23288529 23289912 1670 3053 NC_000014.9 velvet.61315 100.0 True relocation, scaffold gap is present, inconsistency = -7929 23281994 23283653 3064 4723 NC_000014.9 velvet.61315 100.0 True local misassembly 23281054 23281763 4734 5443 NC_000014.9 velvet.61315 100.0 True fake: scaffold gap size wrong estimation (local) 23283823 23287368 8343 11980 NC_000014.9 velvet.61315 99.91 True fake: scaffold gap size wrong estimation (local) 23289917 23290606 15674 16363 NC_000014.9 velvet.61315 100.0 True relocation, scaffold gap is present, inconsistency = 76394871 99694781 99695631 25667 26517 NC_000014.9 velvet.61315 100.0 True fake: scaffold gap size wrong estimation (local) 99696399 99697592 27921 29075 NC_000014.9 velvet.61315 96.73 True fake: scaffold gap size wrong estimation (local) 99697693 99700840 29259 32583 NC_000014.9 velvet.61315 95.65 True fake: scaffold gap size wrong estimation (local) 99700999 99701818 33155 33974 NC_000014.9 velvet.61315 99.88 True fake: scaffold gap size wrong estimation (local) 99702100 99705437 34687 38024 NC_000014.9 velvet.61315 99.97 True fake: scaffold gap size wrong estimation (local) 99713969 99714600 42267 42898 NC_000014.9 velvet.61315 99.68 True fake: scaffold gap size wrong estimation (local) 99714791 99719260 43922 48391 NC_000014.9 velvet.61315 99.82 True fake: scaffold gap size wrong estimation (local) 99721096 99723351 51213 53462 NC_000014.9 velvet.61315 99.65 True fake: scaffold gap size wrong estimation (local) 99723610 99727864 54579 58936 NC_000014.9 velvet.61315 99.93 True fake: scaffold gap size wrong estimation (local) 99727967 99729547 59702 61216 NC_000014.9 velvet.61315 95.62 True fake: scaffold gap size wrong estimation (local) 99729800 99736164 62237 68601 NC_000014.9 velvet.61315 99.89 True fake: scaffold gap size wrong estimation (local) 99736751 99738232 70060 71541 NC_000014.9 velvet.61315 99.66 True fake: scaffold gap size wrong estimation (extensive) 99767622 99768789 93325 94492 NC_000014.9 velvet.61315 100.0 True fake: scaffold gap size wrong estimation (local) 99769019 99770802 95543 97326 NC_000014.9 velvet.61315 99.83 True fake: scaffold gap size wrong estimation (local) 99771088 99771606 97850 98368 NC_000014.9 velvet.61315 100.0 True fake: scaffold gap size wrong estimation (local) 99771816 99776328 99108 103620 NC_000014.9 velvet.61315 99.98 True fake: scaffold gap size wrong estimation (local) 99776535 99777483 104321 105269 NC_000014.9 velvet.61315 100.0 True fake: scaffold gap size wrong estimation (local) 99783776 99785107 108312 109912 NC_000014.9 velvet.61315 100.0 True fake: scaffold gap size wrong estimation (local) 99785356 99787288 110513 112491 NC_000014.9 velvet.61315 99.95 True fake: scaffold gap size wrong estimation (local) 99787545 99789285 113541 115281 NC_000014.9 velvet.61315 100.0 True fake: scaffold gap size wrong estimation (local) 99789510 99790419 115492 116401 NC_000014.9 velvet.61315 100.0 True fake: scaffold gap size wrong estimation (local) 99791131 99793072 117938 119879 NC_000014.9 velvet.61315 100.0 True fake: scaffold gap size wrong estimation (local) 99793759 99794352 121327 121920 NC_000014.9 velvet.61315 100.0 True fake: not a misassembly (possible transposable element) 99777695 99783014 121931 127250 NC_000014.9 velvet.61315 99.96 True fake: not a misassembly (possible transposable element) 99800529 99801360 129113 129944 NC_000014.9 velvet.61315 100.0 True relocation, scaffold gap is present, inconsistency = -71152943 28648428 28649357 129955 130884 NC_000014.9 velvet.61315 99.89 True fake: scaffold gap size wrong estimation (local) 28649647 28660369 131901 142773 NC_000014.9 velvet.61315 99.94 True fake: scaffold gap size wrong estimation (local) 28660490 28664105 143674 147289 NC_000014.9 velvet.61315 99.89 True relocation, scaffold gap is present, inconsistency = 71137300 99801646 99806338 147530 152222 NC_000014.9 velvet.61315 100.0 True relocation, scaffold gap is present, inconsistency = -7731 99798618 99800495 152233 154110 NC_000014.9 velvet.61315 99.89 True fake: scaffold gap size wrong estimation (local) 99806618 99811559 154121 159062 NC_000014.9 velvet.61315 99.96 True relocation, scaffold gap is present, inconsistency = -71144901 28666669 28667429 159073 159833 NC_000014.9 velvet.61315 100.0 True local misassembly 28665050 28666647 159844 161441 NC_000014.9 velvet.61315 99.94 True fake: scaffold gap size wrong estimation (local) 28667713 28681293 162483 176313 NC_000014.9 velvet.61315 99.95 True fake: scaffold gap size wrong estimation (local) 28681358 28682347 177102 178091 NC_000014.9 velvet.61315 100.0 True relocation, scaffold gap is present, inconsistency = 71132826 99815432 99816204 178350 179122 NC_000014.9 velvet.61315 100.0 True fake: scaffold gap size wrong estimation (local) 99816463 99823992 179790 188634 NC_000014.9 velvet.61315 99.96 True fake: scaffold gap size wrong estimation (local) 99824260 99825040 189507 190287 NC_000014.9 velvet.61315 100.0 True fake: scaffold gap size wrong estimation (local) 99825090 99826129 190502 191517 NC_000014.9 velvet.61315 97.56 True relocation, scaffold gap is present, inconsistency = -71138236 28688167 28692705 191791 196329 NC_000014.9 velvet.61315 99.98 True fake: scaffold gap size wrong estimation (local) 28692770 28696403 196340 200720 NC_000014.9 velvet.61315 97.85 True fake: scaffold gap size wrong estimation (local) 28696636 28699336 201704 204404 NC_000014.9 velvet.61315 99.7 True fake: scaffold gap size wrong estimation (local) 28699530 28700930 205407 206807 NC_000014.9 velvet.61315 99.93 True fake: scaffold gap size wrong estimation (local) 28706374 28711482 206818 211926 NC_000014.9 velvet.61315 99.82 True relocation, scaffold gap is present, inconsistency = -28939 28682554 28683453 211937 212814 NC_000014.9 velvet.61315 97.53 True fake: scaffold gap size wrong estimation (local) 28685231 28685941 216028 216738 NC_000014.9 velvet.61315 99.86 True fake: scaffold gap size wrong estimation (local) 28686681 28688112 217908 219332 NC_000014.9 velvet.61315 99.37 True relocation, scaffold gap is present, inconsistency = 71150838 99838961 99840982 219343 221364 NC_000014.9 velvet.61315 99.95 True relocation, scaffold gap is present, inconsistency = -12215 99828778 99830576 221375 223173 NC_000014.9 velvet.61315 99.94 True fake: scaffold gap size wrong estimation (local) 99830847 99834320 223776 227783 NC_000014.9 velvet.61315 99.97 True fake: scaffold gap size wrong estimation (local) 99841014 99844224 227794 231766 NC_000014.9 velvet.61315 99.53 True relocation, scaffold gap is present, inconsistency = -9750 99835123 99836213 232415 233505 NC_000014.9 velvet.61315 99.91 True relocation, scaffold gap is present, inconsistency = -71134990 28701234 28704762 233516 237044 NC_000014.9 velvet.61315 99.66 True fake: scaffold gap size wrong estimation (local) 28705276 28706191 237843 238734 NC_000014.9 velvet.61315 97.13 True fake: scaffold gap size wrong estimation (local) 28712083 28715018 239523 242540 NC_000014.9 velvet.61315 96.38 True fake: scaffold gap size wrong estimation (local) 28715114 28715986 242676 243548 NC_000014.9 velvet.61315 100.0 True fake: scaffold gap size wrong estimation (local) 28716274 28717512 244524 245762 NC_000014.9 velvet.61315 99.84 True fake: scaffold gap size wrong estimation (local) 28717801 28722042 246645 250876 NC_000014.9 velvet.61315 99.51 True fake: scaffold gap size wrong estimation (local) 28722200 28724109 251699 253591 NC_000014.9 velvet.61315 98.9 True fake: scaffold gap size wrong estimation (local) 28724377 28725205 254566 255394 NC_000014.9 velvet.61315 98.91 True indel: indel (> 5bp) 28725219 28725820 255395 255996 NC_000014.9 velvet.61315 99.34 True indel: indel (<= 5bp) 28725822 28728547 255997 258722 NC_000014.9 velvet.61315 99.78 True fake: scaffold gap size wrong estimation (local) 28728548 28731914 258960 262326 NC_000014.9 velvet.61315 99.2 True fake: scaffold gap size wrong estimation (local) 28750998 28766646 278047 295315 NC_000014.9 velvet.61315 99.85 True relocation, scaffold gap is present, inconsistency = 24716957 53484156 53489364 301074 295868 NC_000014.9 velvet.61315 99.87 True fake: scaffold gap size wrong estimation (local) 53482713 53483829 302512 301396 NC_000014.9 velvet.61315 99.73 True fake: scaffold gap size wrong estimation (local) 53477540 53482088 308629 304034 NC_000014.9 velvet.61315 100.0 True fake: scaffold gap size wrong estimation (local) 53467185 53476755 320445 310205 NC_000014.9 velvet.61315 99.64 True fake: not a misassembly (possible transposable element) 35591930 35592599 322287 322956 NC_000014.9 velvet.61315 99.85 True fake: not a misassembly (possible transposable element) 53461735 53465663 326925 322997 NC_000014.9 velvet.61315 100.0 True relocation, scaffold gap is present, inconsistency = 17863281 35593874 35598443 326936 331505 NC_000014.9 velvet.61315 100.0 True fake: scaffold gap size wrong estimation (local) 35598720 35599493 332681 333454 NC_000014.9 velvet.61315 100.0 True relocation, scaffold gap is present, inconsistency = -91891 35508485 35511199 334337 336984 NC_000014.9 velvet.61315 97.4 True fake: scaffold gap size wrong estimation (local) 35511665 35514427 338261 341023 NC_000014.9 velvet.61315 99.86 True fake: scaffold gap size wrong estimation (local) 35514700 35515467 341840 342607 NC_000014.9 velvet.61315 99.87 True fake: scaffold gap size wrong estimation (local) 35515727 35516970 343161 344404 NC_000014.9 velvet.61315 100.0 True fake: scaffold gap size wrong estimation (local) 35517195 35518594 344930 346319 NC_000014.9 velvet.61315 99.29 True fake: scaffold gap size wrong estimation (local) 35519115 35523327 347493 351732 NC_000014.9 velvet.61315 97.63 True fake: scaffold gap size wrong estimation (local) 35523581 35524636 352087 353142 NC_000014.9 velvet.61315 100.0 True fake: scaffold gap size wrong estimation (local) 35538033 35541062 366011 369133 NC_000014.9 velvet.61315 100.0 True relocation, scaffold gap is present, inconsistency = 85476 35627080 35629541 369675 372201 NC_000014.9 velvet.61315 99.96 True fake: scaffold gap size wrong estimation (local) 35629640 35630304 372297 372954 NC_000014.9 velvet.61315 98.95 True relocation, scaffold gap is present, inconsistency = -9305 35623115 35623823 375070 375778 NC_000014.9 velvet.61315 100.0 True local misassembly 35624231 35624937 375779 376485 NC_000014.9 velvet.61315 98.59 True fake: scaffold gap size wrong estimation (local) 35625181 35627064 378089 379972 NC_000014.9 velvet.61315 99.95 True fake: scaffold gap size wrong estimation (local) 35650349 35652382 401485 403517 NC_000014.9 velvet.61315 99.95 True fake: scaffold gap size wrong estimation (local) 35652708 35657200 404681 409239 NC_000014.9 velvet.61315 100.0 True relocation, scaffold gap is present, inconsistency = 150531 35501058 35501881 410358 409535 NC_000014.9 velvet.61315 99.51 True relocation, scaffold gap is present, inconsistency = 6761456 28731940 28732891 417069 418020 NC_000014.9 velvet.61315 99.79 True fake: scaffold gap size wrong estimation (local) 28733198 28735349 419193 421344 NC_000014.9 velvet.61315 99.63 True relocation, scaffold gap is present, inconsistency = 6714846 35462057 35462601 433743 433206 NC_000014.9 velvet.61315 98.35 True fake: scaffold gap size wrong estimation (local) 35458694 35461769 437679 434533 NC_000014.9 velvet.61315 99.93 True fake: scaffold gap size wrong estimation (local) 35457360 35457996 440415 439779 NC_000014.9 velvet.61315 99.69 True fake: not a misassembly (possible transposable element) 28837071 28840764 444119 440426 NC_000014.9 velvet.61315 99.97 True fake: not a misassembly (possible transposable element) 35453810 35455030 445350 444130 NC_000014.9 velvet.61315 99.18 True local misassembly 35452293 35453665 446723 445351 NC_000014.9 velvet.61315 99.93 True relocation, scaffold gap is present, inconsistency = 6674428 28767733 28777854 446734 457251 NC_000014.9 velvet.61315 99.99 True fake: scaffold gap size wrong estimation (local) 28778111 28786526 458329 466744 NC_000014.9 velvet.61315 99.99 True fake: scaffold gap size wrong estimation (local) 28787021 28788063 467920 468962 NC_000014.9 velvet.61315 99.9 True fake: not a misassembly (possible transposable element) 35423571 35425345 470752 468973 NC_000014.9 velvet.61315 99.77 True fake: not a misassembly (possible transposable element) 28788319 28791186 470763 473726 NC_000014.9 velvet.61315 100.0 True fake: scaffold gap size wrong estimation (local) 28791447 28792315 474690 475536 NC_000014.9 velvet.61315 97.44 True fake: scaffold gap size wrong estimation (local) 28792610 28797665 475867 482139 NC_000014.9 velvet.61315 99.94 True fake: scaffold gap size wrong estimation (local) 28797940 28800590 483183 485833 NC_000014.9 velvet.61315 100.0 True fake: scaffold gap size wrong estimation (local) 28803753 28804499 490440 491186 NC_000014.9 velvet.61315 99.87 True relocation, scaffold gap is present, inconsistency = 6658306 35463451 35465162 491832 493536 NC_000014.9 velvet.61315 99.59 True relocation, scaffold gap is present, inconsistency = 6711211 28749364 28750683 496412 495093 NC_000014.9 velvet.61315 100.0 True fake: scaffold gap size wrong estimation (local) 28745926 28748600 500514 497840 NC_000014.9 velvet.61315 99.89 True fake: scaffold gap size wrong estimation (local) 28743306 28745608 504007 501726 NC_000014.9 velvet.61315 99.0 True fake: scaffold gap size wrong estimation (local) 28741209 28742986 506849 505083 NC_000014.9 velvet.61315 99.38 True fake: scaffold gap size wrong estimation (local) 28739673 28740975 508683 507381 NC_000014.9 velvet.61315 99.92 True fake: scaffold gap size wrong estimation (local) 28735560 28739381 513511 509690 NC_000014.9 velvet.61315 99.74 True relocation, scaffold gap is present, inconsistency = 13071570 41810962 41813392 513522 515952 NC_000014.9 velvet.61315 99.92 True fake: not a misassembly (possible transposable element) 35390286 35391625 517928 516589 NC_000014.9 velvet.61315 99.93 True fake: not a misassembly (possible transposable element) 41808532 41810938 518032 520426 NC_000014.9 velvet.61315 99.42 True relocation, scaffold gap is present, inconsistency = 6415060 35392778 35393461 521120 520437 NC_000014.9 velvet.61315 99.85 True fake: scaffold gap size wrong estimation (local) 35386383 35389580 525248 521983 NC_000014.9 velvet.61315 99.71 True relocation, scaffold gap is present, inconsistency = 51624 35308414 35309390 551593 550617 NC_000014.9 velvet.61315 98.98 True fake: scaffold gap size wrong estimation (local) 35305231 35305942 555518 554807 NC_000014.9 velvet.61315 98.6 True fake: scaffold gap size wrong estimation (local) 35302096 35303951 559540 557685 NC_000014.9 velvet.61315 99.89 True fake: scaffold gap size wrong estimation (local) 35299595 35300359 563013 562249 NC_000014.9 velvet.61315 100.0 True fake: scaffold gap size wrong estimation (local) 35297469 35298207 566009 565271 NC_000014.9 velvet.61315 98.65 True local misassembly 35296595 35297115 566530 566010 NC_000014.9 velvet.61315 100.0 True fake: scaffold gap size wrong estimation (local) 35295716 35296317 569139 568538 NC_000014.9 velvet.61315 100.0 True relocation, scaffold gap is present, inconsistency = 13800 35310403 35312130 569425 571152 NC_000014.9 velvet.61315 100.0 True fake: scaffold gap size wrong estimation (local) 35312550 35313346 572239 573035 NC_000014.9 velvet.61315 100.0 True fake: scaffold gap size wrong estimation (local) 35313863 35315408 573740 575270 NC_000014.9 velvet.61315 98.25 True fake: scaffold gap size wrong estimation (extensive) 35325092 35325595 577539 578042 NC_000014.9 velvet.61315 100.0 True relocation, scaffold gap is present, inconsistency = -10042 35316886 35317826 579375 580315 NC_000014.9 velvet.61315 100.0 True fake: scaffold gap size wrong estimation (local) 35317827 35319174 580819 582166 NC_000014.9 velvet.61315 99.55 True fake: scaffold gap size wrong estimation (local) 35320404 35321474 584294 585364 NC_000014.9 velvet.61315 99.91 True fake: scaffold gap size wrong estimation (local) 35323258 35323887 588105 588730 NC_000014.9 velvet.61315 99.37 True fake: scaffold gap size wrong estimation (local) 35324135 35324976 589320 590210 NC_000014.9 velvet.61315 99.76 True relocation, scaffold gap is present, inconsistency = 6549811 41874798 41876295 590221 591718 NC_000014.9 velvet.61315 99.93 True inversion, scaffold gap is present 41871589 41874732 594957 591729 NC_000014.9 velvet.61315 99.97 True fake: scaffold gap size wrong estimation (local) 41869742 41871301 597468 595869 NC_000014.9 velvet.61315 96.52 True fake: scaffold gap size wrong estimation (local) 41864472 41869558 603332 598246 NC_000014.9 velvet.61315 99.9 True fake: scaffold gap size wrong estimation (local) 41863147 41863684 605191 604654 NC_000014.9 velvet.61315 99.81 True fake: scaffold gap size wrong estimation (local) 41857084 41862859 612167 605887 NC_000014.9 velvet.61315 99.65 True fake: scaffold gap size wrong estimation (local) 41854475 41856658 615350 613167 NC_000014.9 velvet.61315 99.86 True relocation, scaffold gap is present, inconsistency = 6491243 35353840 35354412 624170 624742 NC_000014.9 velvet.61315 99.83 True inversion, scaffold gap is present 35355870 35357567 626652 624920 NC_000014.9 velvet.61315 97.41 True relocation, scaffold gap is present, inconsistency = 6477147 41835043 41835933 626981 627871 NC_000014.9 velvet.61315 99.89 True relocation, scaffold gap is present, inconsistency = -6481594 35357928 35358673 631460 632205 NC_000014.9 velvet.61315 99.87 True fake: scaffold gap size wrong estimation (local) 35359188 35359972 632352 633168 NC_000014.9 velvet.61315 95.35 True relocation, scaffold gap is present, inconsistency = 6469407 41829720 41834678 638410 633509 NC_000014.9 velvet.61315 98.79 True fake: scaffold gap size wrong estimation (local) 41815763 41829690 654013 639272 NC_000014.9 velvet.61315 99.3 True fake: scaffold gap size wrong estimation (local) 41814196 41815612 656257 654841 NC_000014.9 velvet.61315 100.0 True CONTIG velvet.61315 677811 misassembled 52651252 52652007 756 1 NC_000014.9 velvet.61324 100.0 True fake: scaffold gap size wrong estimation (local) 52617640 52624543 34809 27825 NC_000014.9 velvet.61324 99.77 True fake: scaffold gap size wrong estimation (local) 52615572 52616277 37501 36796 NC_000014.9 velvet.61324 99.86 True relocation, scaffold gap is present, inconsistency = -8668873 61283039 61283727 38906 38219 NC_000014.9 velvet.61324 99.85 True fake: scaffold gap size wrong estimation (local) 61252111 61254339 70160 67936 NC_000014.9 velvet.61324 99.69 True relocation, scaffold gap is present, inconsistency = 146067 61099834 61106033 76515 70171 NC_000014.9 velvet.61324 99.16 True relocation, scaffold gap is present, inconsistency = -152936 61242666 61243192 86618 86093 NC_000014.9 velvet.61324 99.62 True local misassembly 61243951 61246122 90942 88756 NC_000014.9 velvet.61324 99.09 True fake: scaffold gap size wrong estimation (local) 61216359 61217109 118429 117679 NC_000014.9 velvet.61324 100.0 True fake: scaffold gap size wrong estimation (local) 61210276 61216179 125174 119203 NC_000014.9 velvet.61324 99.88 True fake: scaffold gap size wrong estimation (local) 61205367 61206828 130460 128999 NC_000014.9 velvet.61324 100.0 True fake: scaffold gap size wrong estimation (local) 61189503 61191408 152318 150413 NC_000014.9 velvet.61324 99.9 True fake: not a misassembly (possible transposable element) 61177302 61178912 153939 152329 NC_000014.9 velvet.61324 100.0 True fake: not a misassembly (possible transposable element) 61185025 61188570 159126 155584 NC_000014.9 velvet.61324 99.72 True relocation, scaffold gap is present, inconsistency = 12139 61171039 61172875 160973 159137 NC_000014.9 velvet.61324 99.84 True fake: not a misassembly (possible transposable element) 61117429 61117969 161444 161983 NC_000014.9 velvet.61324 99.63 True fake: not a misassembly (possible transposable element) 61173899 61175887 163982 161994 NC_000014.9 velvet.61324 99.9 True relocation, scaffold gap is present, inconsistency = -29116641 90287045 90289591 167597 164931 NC_000014.9 velvet.61324 97.39 True fake: scaffold gap size wrong estimation (local) 90282844 90283696 172024 171172 NC_000014.9 velvet.61324 100.0 True fake: scaffold gap size wrong estimation (local) 90281167 90282666 174627 173104 NC_000014.9 velvet.61324 98.01 True relocation, scaffold gap is present, inconsistency = 30018216 60256369 60262940 181209 174638 NC_000014.9 velvet.61324 99.98 True fake: scaffold gap size wrong estimation (local) 60222054 60228867 212131 205318 NC_000014.9 velvet.61324 100.0 True relocation, scaffold gap is present, inconsistency = -30068625 90276489 90281144 226321 221666 NC_000014.9 velvet.61324 99.87 True fake: scaffold gap size wrong estimation (local) 90273555 90276208 230151 227405 NC_000014.9 velvet.61324 99.5 True fake: scaffold gap size wrong estimation (local) 90272166 90273271 231965 230860 NC_000014.9 velvet.61324 99.91 True fake: scaffold gap size wrong estimation (local) 90269380 90271910 235536 233000 NC_000014.9 velvet.61324 99.65 True fake: scaffold gap size wrong estimation (local) 90233912 90234545 264315 263682 NC_000014.9 velvet.61324 99.68 True fake: scaffold gap size wrong estimation (local) 90230355 90231050 268161 267466 NC_000014.9 velvet.61324 99.86 True fake: scaffold gap size wrong estimation (local) 90227000 90229448 271916 269531 NC_000014.9 velvet.61324 96.93 True fake: scaffold gap size wrong estimation (local) 90226115 90226770 273373 272718 NC_000014.9 velvet.61324 100.0 True relocation, scaffold gap is present, inconsistency = 30071221 60150735 60153434 277532 274833 NC_000014.9 velvet.61324 99.96 True relocation, scaffold gap is present, inconsistency = -12304 60162380 60163028 278191 277543 NC_000014.9 velvet.61324 100.0 True fake: scaffold gap size wrong estimation (local) 60160854 60162130 279662 278386 NC_000014.9 velvet.61324 100.0 True inversion, scaffold gap is present 60149269 60150354 294070 295204 NC_000014.9 velvet.61324 100.0 True local misassembly 60147049 60149046 295215 297212 NC_000014.9 velvet.61324 100.0 True inversion, scaffold gap is present 60145653 60146476 298046 297223 NC_000014.9 velvet.61324 100.0 True fake: scaffold gap size wrong estimation (local) 60142921 60145403 301370 298888 NC_000014.9 velvet.61324 100.0 True fake: scaffold gap size wrong estimation (extensive) 60129227 60130072 305419 304530 NC_000014.9 velvet.61324 100.0 True fake: scaffold gap size wrong estimation (local) 60113640 60128770 321869 306640 NC_000014.9 velvet.61324 99.91 True fake: scaffold gap size wrong estimation (local) 60082062 60098656 352357 334558 NC_000014.9 velvet.61324 99.59 True fake: scaffold gap size wrong estimation (local) 60081429 60081955 353909 353383 NC_000014.9 velvet.61324 100.0 True fake: scaffold gap size wrong estimation (local) 60055892 60059284 381054 377570 NC_000014.9 velvet.61324 99.82 True fake: scaffold gap size wrong estimation (local) 60055019 60055649 382493 381863 NC_000014.9 velvet.61324 100.0 True fake: scaffold gap size wrong estimation (local) 60050544 60054749 387383 383053 NC_000014.9 velvet.61324 99.9 True fake: scaffold gap size wrong estimation (local) 60046018 60046503 393165 392632 NC_000014.9 velvet.61324 99.52 True fake: scaffold gap size wrong estimation (local) 60042584 60045513 396836 393920 NC_000014.9 velvet.61324 97.9 True fake: not a misassembly (possible transposable element) 23592994 23593524 397377 396847 NC_000014.9 velvet.61324 100.0 True fake: not a misassembly (possible transposable element) 60035961 60036770 402513 401705 NC_000014.9 velvet.61324 99.88 True fake: scaffold gap size wrong estimation (local) 60034281 60035020 404466 403727 NC_000014.9 velvet.61324 99.86 True fake: scaffold gap size wrong estimation (local) 60025242 60034001 414249 405376 NC_000014.9 velvet.61324 99.83 True fake: scaffold gap size wrong estimation (local) 60024235 60025049 415707 414895 NC_000014.9 velvet.61324 99.75 True fake: scaffold gap size wrong estimation (local) 60018601 60023658 421837 416780 NC_000014.9 velvet.61324 99.8 True CONTIG velvet.61324 422001 misassembled 92297759 92299855 110 2205 NC_000014.9 velvet.61336 99.81 True fake: scaffold gap size wrong estimation (local) 92300066 92302012 3126 5071 NC_000014.9 velvet.61336 99.74 True fake: scaffold gap size wrong estimation (local) 92302484 92305566 6330 9412 NC_000014.9 velvet.61336 99.9 True fake: scaffold gap size wrong estimation (local) 92333398 92335362 34839 36782 NC_000014.9 velvet.61336 98.73 True relocation, scaffold gap is present, inconsistency = -71815744 20519629 20522311 36793 39474 NC_000014.9 velvet.61336 99.93 True relocation, scaffold gap is present, inconsistency = 14735907 35258229 35259645 39485 40900 NC_000014.9 velvet.61336 99.93 True local misassembly 35253374 35254402 40966 41994 NC_000014.9 velvet.61336 100.0 True relocation, scaffold gap is present, inconsistency = -14731490 20522924 20526222 42006 45351 NC_000014.9 velvet.61336 98.39 True fake: not a misassembly (possible transposable element) 35245645 35249345 45362 49062 NC_000014.9 velvet.61336 99.89 True fake: not a misassembly (possible transposable element) 20527445 20529145 49073 50773 NC_000014.9 velvet.61336 100.0 True relocation, scaffold gap is present, inconsistency = 31925616 52454773 52458306 50785 54318 NC_000014.9 velvet.61336 99.94 True relocation, scaffold gap is present, inconsistency = 50497059 102955376 102956575 54329 55528 NC_000014.9 velvet.61336 99.92 True fake: scaffold gap size wrong estimation (local) 102957222 102958885 56748 58411 NC_000014.9 velvet.61336 99.34 True fake: scaffold gap size wrong estimation (local) 102959321 102959859 59807 60345 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 102960214 102960900 60791 61475 NC_000014.9 velvet.61336 99.71 True fake: scaffold gap size wrong estimation (local) 102961841 102962595 62705 63459 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 102962854 102964936 64598 66681 NC_000014.9 velvet.61336 99.95 True fake: scaffold gap size wrong estimation (local) 102965224 102967846 67500 70591 NC_000014.9 velvet.61336 99.8 True relocation, scaffold gap is present, inconsistency = -38383656 64586127 64587463 72528 73860 NC_000014.9 velvet.61336 99.7 True relocation, scaffold gap is present, inconsistency = 12131647 52453266 52453903 75074 74437 NC_000014.9 velvet.61336 100.0 True fake: not a misassembly (possible transposable element) 100919448 100921397 75085 77033 NC_000014.9 velvet.61336 99.95 True fake: not a misassembly (possible transposable element) 52448081 52449760 82269 80599 NC_000014.9 velvet.61336 99.46 True fake: scaffold gap size wrong estimation (local) 52441541 52447768 89624 83407 NC_000014.9 velvet.61336 99.71 True fake: scaffold gap size wrong estimation (local) 52430252 52441334 101889 90437 NC_000014.9 velvet.61336 98.58 True fake: scaffold gap size wrong estimation (local) 52426991 52429971 105933 102953 NC_000014.9 velvet.61336 99.97 True fake: scaffold gap size wrong estimation (local) 52425478 52426450 108111 107139 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 52415841 52418146 111502 109197 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 52414734 52415549 113510 112695 NC_000014.9 velvet.61336 98.77 True local misassembly 52413628 52414529 114412 113511 NC_000014.9 velvet.61336 99.89 True fake: scaffold gap size wrong estimation (local) 52407696 52411457 120886 117127 NC_000014.9 velvet.61336 99.81 True fake: scaffold gap size wrong estimation (local) 52399039 52401583 123441 120897 NC_000014.9 velvet.61336 99.92 True fake: scaffold gap size wrong estimation (local) 52396722 52398796 126517 124386 NC_000014.9 velvet.61336 99.45 True indel: indel (> 5bp) 52392709 52396708 130539 126580 NC_000014.9 velvet.61336 98.92 True relocation, scaffold gap is present, inconsistency = -20677 52411904 52413375 132014 130550 NC_000014.9 velvet.61336 99.32 True fake: scaffold gap size wrong estimation (local) 52406755 52407655 132925 132025 NC_000014.9 velvet.61336 99.89 True indel: indel (> 5bp) 52401898 52406701 137844 133041 NC_000014.9 velvet.61336 99.9 True fake: scaffold gap size wrong estimation (local) 52382245 52382790 160015 159471 NC_000014.9 velvet.61336 99.27 True relocation, scaffold gap is present, inconsistency = -11710 52391474 52392707 162496 161263 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 52390253 52391277 163714 162690 NC_000014.9 velvet.61336 99.9 True fake: scaffold gap size wrong estimation (local) 52359134 52363617 191224 186741 NC_000014.9 velvet.61336 99.91 True relocation, scaffold gap is present, inconsistency = -23480 52377153 52381850 196624 191988 NC_000014.9 velvet.61336 98.67 True fake: scaffold gap size wrong estimation (local) 52375120 52376254 199398 198264 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 52342371 52344541 231935 229765 NC_000014.9 velvet.61336 99.91 True fake: scaffold gap size wrong estimation (local) 52337809 52342114 237717 232836 NC_000014.9 velvet.61336 95.57 True fake: scaffold gap size wrong estimation (local) 52334990 52337528 241558 238929 NC_000014.9 velvet.61336 96.46 True fake: scaffold gap size wrong estimation (local) 52332973 52334705 244401 242663 NC_000014.9 velvet.61336 99.83 True fake: scaffold gap size wrong estimation (local) 52331504 52332721 246052 244835 NC_000014.9 velvet.61336 99.75 True fake: scaffold gap size wrong estimation (local) 52325119 52331215 253247 247151 NC_000014.9 velvet.61336 99.74 True fake: scaffold gap size wrong estimation (local) 52323521 52324852 255485 254154 NC_000014.9 velvet.61336 99.85 True relocation, scaffold gap is present, inconsistency = -30959 52348005 52353313 261962 256652 NC_000014.9 velvet.61336 99.83 True relocation, scaffold gap is present, inconsistency = 23825 52321293 52322336 263806 264849 NC_000014.9 velvet.61336 99.71 True fake: scaffold gap size wrong estimation (local) 52322732 52323264 265260 265792 NC_000014.9 velvet.61336 98.87 True fake: scaffold gap size wrong estimation (local) 52346454 52347945 283874 285365 NC_000014.9 velvet.61336 99.8 True fake: not a misassembly (possible transposable element) 52345092 52346405 287609 286296 NC_000014.9 velvet.61336 99.92 True fake: not a misassembly (possible transposable element) 52354223 52358905 294550 299333 NC_000014.9 velvet.61336 99.87 True fake: scaffold gap size wrong estimation (local) 52363919 52372849 305961 314890 NC_000014.9 velvet.61336 99.83 True relocation, scaffold gap is present, inconsistency = 41196 52305867 52321241 331942 316372 NC_000014.9 velvet.61336 99.87 True fake: scaffold gap size wrong estimation (local) 52299506 52305572 339725 332991 NC_000014.9 velvet.61336 99.88 True fake: scaffold gap size wrong estimation (local) 52295840 52298991 344059 340908 NC_000014.9 velvet.61336 99.94 True fake: scaffold gap size wrong estimation (local) 52280707 52286170 353027 347610 NC_000014.9 velvet.61336 98.98 True relocation, scaffold gap is present, inconsistency = -9583 52287670 52290066 355665 353251 NC_000014.9 velvet.61336 100.0 True relocation, scaffold gap is present, inconsistency = -7885 52293860 52295091 357360 356129 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 52290376 52293576 361474 358228 NC_000014.9 velvet.61336 100.0 True fake: not a misassembly (possible transposable element) 52278598 52279847 362725 361485 NC_000014.9 velvet.61336 98.09 True fake: not a misassembly (possible transposable element) 52286373 52287331 363694 362736 NC_000014.9 velvet.61336 99.9 True fake: scaffold gap size wrong estimation (local) 52270523 52278021 374391 365382 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 52262061 52270275 383704 375332 NC_000014.9 velvet.61336 99.58 True fake: scaffold gap size wrong estimation (local) 52258117 52261429 388322 385010 NC_000014.9 velvet.61336 99.85 True fake: scaffold gap size wrong estimation (local) 52252989 52254702 393892 392179 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 52249022 52252699 398610 394932 NC_000014.9 velvet.61336 99.92 True fake: scaffold gap size wrong estimation (local) 52245692 52248791 402717 399609 NC_000014.9 velvet.61336 99.77 True fake: scaffold gap size wrong estimation (local) 52243655 52245426 405066 403343 NC_000014.9 velvet.61336 97.11 True fake: scaffold gap size wrong estimation (local) 52239771 52243482 409578 405865 NC_000014.9 velvet.61336 99.81 True fake: scaffold gap size wrong estimation (local) 52237051 52239500 413150 410674 NC_000014.9 velvet.61336 98.71 True fake: scaffold gap size wrong estimation (local) 52233184 52236833 417846 414145 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 52232322 52233067 419200 418455 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 52227507 52232030 424536 419938 NC_000014.9 velvet.61336 99.8 True fake: scaffold gap size wrong estimation (local) 52225428 52225976 427612 427064 NC_000014.9 velvet.61336 99.64 True fake: scaffold gap size wrong estimation (local) 52223826 52225116 429976 428686 NC_000014.9 velvet.61336 99.46 True indel: indel (> 5bp) 52220544 52223807 433240 429977 NC_000014.9 velvet.61336 99.88 True fake: scaffold gap size wrong estimation (local) 52219586 52220269 434610 433927 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 52214268 52218668 441405 436095 NC_000014.9 velvet.61336 99.69 True fake: scaffold gap size wrong estimation (local) 52191898 52195320 469679 466257 NC_000014.9 velvet.61336 99.45 True fake: scaffold gap size wrong estimation (local) 52185697 52190993 477498 471424 NC_000014.9 velvet.61336 99.58 True fake: scaffold gap size wrong estimation (local) 52182051 52185553 482101 478666 NC_000014.9 velvet.61336 97.88 True fake: scaffold gap size wrong estimation (local) 52153189 52157104 510211 505601 NC_000014.9 velvet.61336 98.9 True fake: scaffold gap size wrong estimation (local) 52115252 52122129 541646 534768 NC_000014.9 velvet.61336 99.78 True fake: scaffold gap size wrong estimation (local) 52110404 52111423 542676 541657 NC_000014.9 velvet.61336 100.0 True local misassembly 52111713 52112521 545652 544844 NC_000014.9 velvet.61336 99.75 True relocation, scaffold gap is present, inconsistency = 32222288 19888048 19889414 545663 547029 NC_000014.9 velvet.61336 99.63 True fake: not a misassembly (possible transposable element) 51061416 51066050 551763 547040 NC_000014.9 velvet.61336 99.89 True fake: not a misassembly (possible transposable element) 19891711 19892643 551778 552710 NC_000014.9 velvet.61336 100.0 True relocation, scaffold gap is present, inconsistency = 24794092 44686746 44689733 552721 555708 NC_000014.9 velvet.61336 99.87 True fake: scaffold gap size wrong estimation (local) 44689921 44694032 556663 560829 NC_000014.9 velvet.61336 99.85 True relocation, scaffold gap is present, inconsistency = 41470554 86166228 86168742 562471 564985 NC_000014.9 velvet.61336 99.92 True fake: scaffold gap size wrong estimation (local) 86169008 86169670 566210 566872 NC_000014.9 velvet.61336 99.85 True fake: scaffold gap size wrong estimation (local) 86169983 86170872 566972 567861 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 86171046 86171611 568770 569335 NC_000014.9 velvet.61336 98.59 True indel: indel (> 5bp) 86171657 86173073 569336 570752 NC_000014.9 velvet.61336 99.01 True local misassembly 86173351 86174210 570753 571612 NC_000014.9 velvet.61336 98.84 True relocation, scaffold gap is present, inconsistency = -40065893 46109041 46111729 572336 575024 NC_000014.9 velvet.61336 99.85 True fake: scaffold gap size wrong estimation (local) 46112049 46112951 575964 576864 NC_000014.9 velvet.61336 99.11 True relocation, scaffold gap is present, inconsistency = 4944851 51059800 51060475 579537 578862 NC_000014.9 velvet.61336 100.0 True relocation, scaffold gap is present, inconsistency = 31161598 19892932 19898191 579548 584806 NC_000014.9 velvet.61336 99.85 True fake: scaffold gap size wrong estimation (local) 19898783 19904019 586057 591517 NC_000014.9 velvet.61336 99.4 True fake: scaffold gap size wrong estimation (local) 19904424 19911507 592720 599803 NC_000014.9 velvet.61336 99.92 True fake: not a misassembly (possible transposable element) 51027839 51030864 605566 602472 NC_000014.9 velvet.61336 99.87 True fake: not a misassembly (possible transposable element) 19914849 19917003 606693 608847 NC_000014.9 velvet.61336 99.81 True fake: not a misassembly (possible transposable element) 51033361 51035015 610489 608858 NC_000014.9 velvet.61336 98.61 True fake: not a misassembly (possible transposable element) 19917200 19922599 610500 616019 NC_000014.9 velvet.61336 99.66 True relocation, scaffold gap is present, inconsistency = 71523604 91465166 91466964 634982 636780 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 91467335 91468438 638164 639252 NC_000014.9 velvet.61336 98.54 True fake: scaffold gap size wrong estimation (local) 91469862 91471810 641444 643392 NC_000014.9 velvet.61336 99.95 True fake: scaffold gap size wrong estimation (local) 91472753 91473831 645147 646225 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 91474080 91475068 646778 647812 NC_000014.9 velvet.61336 99.89 True fake: scaffold gap size wrong estimation (local) 91477982 91479093 647823 648934 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 91487283 91487857 661084 661658 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 91494095 91494619 661791 662315 NC_000014.9 velvet.61336 99.62 True fake: scaffold gap size wrong estimation (local) 91494785 91495325 662630 663170 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 91495463 91497366 663979 665819 NC_000014.9 velvet.61336 96.62 True fake: scaffold gap size wrong estimation (local) 91502026 91503043 671347 672364 NC_000014.9 velvet.61336 99.9 True fake: scaffold gap size wrong estimation (local) 91504634 91505186 674857 675409 NC_000014.9 velvet.61336 99.82 True fake: scaffold gap size wrong estimation (local) 91505453 91505962 675523 676032 NC_000014.9 velvet.61336 97.84 True fake: scaffold gap size wrong estimation (local) 91527319 91528376 703864 704909 NC_000014.9 velvet.61336 98.85 True local misassembly 91525829 91527069 704920 706160 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 91530973 91531518 711650 712195 NC_000014.9 velvet.61336 97.99 True relocation, scaffold gap is present, inconsistency = -71626063 19934973 19937292 741713 744032 NC_000014.9 velvet.61336 99.91 True fake: scaffold gap size wrong estimation (local) 19937385 19947113 744877 754895 NC_000014.9 velvet.61336 99.82 True fake: scaffold gap size wrong estimation (local) 19947399 19954682 755970 763252 NC_000014.9 velvet.61336 99.88 True fake: scaffold gap size wrong estimation (local) 19982123 19983038 789688 790603 NC_000014.9 velvet.61336 99.34 True relocation, scaffold gap is present, inconsistency = 32079811 52062860 52065470 790614 793224 NC_000014.9 velvet.61336 99.96 True relocation, scaffold gap is present, inconsistency = -32097396 19968085 19976931 793235 803104 NC_000014.9 velvet.61336 99.77 True relocation, scaffold gap is present, inconsistency = 744346 20721288 20726019 807846 803115 NC_000014.9 velvet.61336 99.89 True fake: scaffold gap size wrong estimation (extensive) 20703703 20704740 815722 814685 NC_000014.9 velvet.61336 99.33 True relocation, scaffold gap is present, inconsistency = 710826 19991386 19992866 817251 815733 NC_000014.9 velvet.61336 97.55 True fake: scaffold gap size wrong estimation (local) 19988025 19988760 821095 820360 NC_000014.9 velvet.61336 99.73 True local misassembly 19989574 19991148 822680 821106 NC_000014.9 velvet.61336 99.87 True fake: scaffold gap size wrong estimation (local) 19983508 19985602 824785 822691 NC_000014.9 velvet.61336 99.86 True fake: scaffold gap size wrong estimation (local) 19980632 19981334 831125 830423 NC_000014.9 velvet.61336 99.72 True local misassembly 19985634 19987334 832829 831136 NC_000014.9 velvet.61336 99.41 True relocation, scaffold gap is present, inconsistency = -735395 20719763 20721018 834095 832840 NC_000014.9 velvet.61336 99.84 True relocation, scaffold gap is present, inconsistency = 25464 20693122 20694288 835272 834106 NC_000014.9 velvet.61336 99.91 True fake: scaffold gap size wrong estimation (local) 20690240 20692832 838869 836277 NC_000014.9 velvet.61336 99.88 True fake: scaffold gap size wrong estimation (local) 20686044 20689633 843829 840240 NC_000014.9 velvet.61336 99.92 True fake: scaffold gap size wrong estimation (local) 20679687 20685760 850971 844949 NC_000014.9 velvet.61336 98.93 True relocation, scaffold gap is present, inconsistency = 13737096 34422887 34424089 851002 852204 NC_000014.9 velvet.61336 100.0 True fake: not a misassembly (possible transposable element) 20667207 20669379 854387 852215 NC_000014.9 velvet.61336 99.95 True fake: not a misassembly (possible transposable element) 34424279 34425941 854398 856060 NC_000014.9 velvet.61336 100.0 True relocation, scaffold gap is present, inconsistency = 57114992 91540944 91542845 857972 856071 NC_000014.9 velvet.61336 99.95 True relocation, scaffold gap is present, inconsistency = 70734752 20800802 20806181 857983 863362 NC_000014.9 velvet.61336 99.91 True relocation, scaffold gap is present, inconsistency = 133919 20648892 20649540 881353 880705 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 20640651 20643378 884091 881364 NC_000014.9 velvet.61336 99.85 True fake: scaffold gap size wrong estimation (local) 20639443 20640355 886199 885287 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 20636622 20637740 889796 888682 NC_000014.9 velvet.61336 99.37 True relocation, scaffold gap is present, inconsistency = -30365436 50994370 50995753 897484 896101 NC_000014.9 velvet.61336 99.86 True fake: scaffold gap size wrong estimation (local) 50993556 50994142 898962 898376 NC_000014.9 velvet.61336 96.42 True local misassembly 50992586 50993354 899731 898963 NC_000014.9 velvet.61336 99.87 True fake: scaffold gap size wrong estimation (local) 50988067 50992294 905008 900730 NC_000014.9 velvet.61336 99.64 True relocation, scaffold gap is present, inconsistency = 29862492 21124947 21125564 905636 905019 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 21121777 21123016 909584 908345 NC_000014.9 velvet.61336 99.68 True fake: scaffold gap size wrong estimation (local) 21115519 21116979 911003 909595 NC_000014.9 velvet.61336 96.28 True relocation, scaffold gap is present, inconsistency = -47725952 68838047 68838664 914427 913810 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 68835348 68836898 917991 916441 NC_000014.9 velvet.61336 99.94 True local misassembly 68837174 68837756 918587 918003 NC_000014.9 velvet.61336 99.66 True relocation, scaffold gap is present, inconsistency = -8444 68843041 68844818 921164 919387 NC_000014.9 velvet.61336 99.94 True relocation, scaffold gap is present, inconsistency = 3742694 65090695 65099560 921951 930816 NC_000014.9 velvet.61336 99.91 True relocation, scaffold gap is present, inconsistency = 16325986 81425557 81428556 930827 933826 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 81428706 81429684 934651 935629 NC_000014.9 velvet.61336 100.0 True inversion, scaffold gap is present 81418406 81422747 939982 935640 NC_000014.9 velvet.61336 99.86 True relocation, scaffold gap is present, inconsistency = 20458584 101881342 101886027 939993 944592 NC_000014.9 velvet.61336 98.14 True relocation, scaffold gap is present, inconsistency = 7701 101893739 101896042 946906 944603 NC_000014.9 velvet.61336 100.0 True relocation, scaffold gap is present, inconsistency = 15676037 86211605 86217691 953004 946917 NC_000014.9 velvet.61336 99.79 True relocation, scaffold gap is present, inconsistency = 50842155 35367626 35369439 954828 953015 NC_000014.9 velvet.61336 99.94 True relocation, scaffold gap is present, inconsistency = -54369678 89735266 89737293 956866 954839 NC_000014.9 velvet.61336 99.95 True relocation, inconsistency = -9623558 99357133 99358424 958557 957266 NC_000014.9 velvet.61336 100.0 True relocation, scaffold gap is present, inconsistency = -3757525 103109689 103114647 963585 958568 NC_000014.9 velvet.61336 98.7 True fake: scaffold gap size wrong estimation (local) 103104661 103109142 969187 964706 NC_000014.9 velvet.61336 99.98 True relocation, scaffold gap is present, inconsistency = 3742363 99360680 99362287 970805 969198 NC_000014.9 velvet.61336 100.0 True relocation, scaffold gap is present, inconsistency = 43329490 56024995 56031179 977000 970816 NC_000014.9 velvet.61336 99.98 True relocation, scaffold gap is present, inconsistency = -1743838 57759881 57768822 985952 977011 NC_000014.9 velvet.61336 99.91 True relocation, scaffold gap is present, inconsistency = -11099858 68859085 68859610 986606 986081 NC_000014.9 velvet.61336 99.62 True relocation, scaffold gap is present, inconsistency = -20847335 89704479 89705485 988550 987541 NC_000014.9 velvet.61336 99.7 True relocation, scaffold gap is present, inconsistency = 34129673 55573738 55574544 988812 989618 NC_000014.9 velvet.61336 99.88 True fake: scaffold gap size wrong estimation (local) 55574815 55577962 990683 993830 NC_000014.9 velvet.61336 99.97 True relocation, scaffold gap is present, inconsistency = -31684187 23893786 23897727 993841 997822 NC_000014.9 velvet.61336 99.92 True fake: scaffold gap size wrong estimation (local) 23899311 23902149 1000140 1002978 NC_000014.9 velvet.61336 99.93 True fake: scaffold gap size wrong estimation (local) 23902354 23903098 1003994 1004738 NC_000014.9 velvet.61336 99.87 True fake: scaffold gap size wrong estimation (local) 23903441 23904477 1004983 1006019 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 23921835 23931576 1018386 1028929 NC_000014.9 velvet.61336 98.93 True fake: scaffold gap size wrong estimation (local) 23931767 23933955 1029895 1032083 NC_000014.9 velvet.61336 99.82 True fake: scaffold gap size wrong estimation (local) 23934346 23935741 1033419 1034814 NC_000014.9 velvet.61336 100.0 True relocation, scaffold gap is present, inconsistency = 50419656 74356444 74360866 1040351 1035861 NC_000014.9 velvet.61336 98.42 True relocation, scaffold gap is present, inconsistency = -27520503 101875006 101876936 1042292 1040362 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 101872286 101874745 1045755 1043227 NC_000014.9 velvet.61336 98.51 True relocation, scaffold gap is present, inconsistency = 19820 101851243 101852455 1045766 1046978 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 101852772 101854922 1048101 1050251 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 101855175 101860354 1051326 1056459 NC_000014.9 velvet.61336 98.94 True fake: scaffold gap size wrong estimation (local) 101877251 101881141 1073727 1077606 NC_000014.9 velvet.61336 99.69 True relocation, scaffold gap is present, inconsistency = 26059 101849717 101851181 1079081 1077617 NC_000014.9 velvet.61336 99.73 True relocation, scaffold gap is present, inconsistency = 27504429 74344762 74345277 1079092 1079607 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 74346188 74351519 1081295 1086627 NC_000014.9 velvet.61336 99.83 True fake: scaffold gap size wrong estimation (local) 74370634 74371527 1099592 1100485 NC_000014.9 velvet.61336 100.0 True local misassembly 74371842 74372497 1100486 1101141 NC_000014.9 velvet.61336 98.48 True relocation, scaffold gap is present, inconsistency = 27518566 101891074 101891999 1101152 1102077 NC_000014.9 velvet.61336 100.0 True relocation, scaffold gap is present, inconsistency = -33021228 68870782 68876036 1102088 1107340 NC_000014.9 velvet.61336 99.77 True fake: scaffold gap size wrong estimation (local) 68876295 68880454 1108382 1112541 NC_000014.9 velvet.61336 99.98 True relocation, scaffold gap is present, inconsistency = 5492105 74373734 74374829 1113716 1114808 NC_000014.9 velvet.61336 99.54 True fake: scaffold gap size wrong estimation (local) 74376229 74376747 1116310 1116828 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 74377973 74378697 1117964 1118688 NC_000014.9 velvet.61336 98.48 True fake: scaffold gap size wrong estimation (local) 74380145 74380862 1120906 1121623 NC_000014.9 velvet.61336 98.61 True fake: scaffold gap size wrong estimation (local) 74383886 74384424 1125212 1125750 NC_000014.9 velvet.61336 97.77 True relocation, scaffold gap is present, inconsistency = 3131843 71246516 71248504 1131211 1129289 NC_000014.9 velvet.61336 96.51 True relocation, scaffold gap is present, inconsistency = -9839 71255426 71256344 1132140 1131222 NC_000014.9 velvet.61336 99.78 True fake: not a misassembly (possible transposable element) 71152297 71154641 1132151 1134499 NC_000014.9 velvet.61336 99.7 True fake: not a misassembly (possible transposable element) 71252463 71253150 1136471 1135784 NC_000014.9 velvet.61336 100.0 True relocation, scaffold gap is present, inconsistency = 93751 71158065 71158689 1136494 1137118 NC_000014.9 velvet.61336 99.04 True local misassembly 71156491 71157780 1137129 1138418 NC_000014.9 velvet.61336 99.69 True fake: not a misassembly (possible transposable element) 99711001 99713192 1140391 1142483 NC_000014.9 velvet.61336 95.28 True fake: not a misassembly (possible transposable element) 71159708 71160304 1142780 1143376 NC_000014.9 velvet.61336 99.66 True fake: scaffold gap size wrong estimation (local) 71161279 71162678 1146094 1147496 NC_000014.9 velvet.61336 99.22 True relocation, scaffold gap is present, inconsistency = 3241589 74404278 74408332 1147507 1151793 NC_000014.9 velvet.61336 99.95 True fake: scaffold gap size wrong estimation (local) 74409284 74415718 1153641 1160075 NC_000014.9 velvet.61336 99.95 True fake: scaffold gap size wrong estimation (local) 74420423 74422679 1160086 1162342 NC_000014.9 velvet.61336 100.0 True local misassembly 74415792 74420143 1162353 1166702 NC_000014.9 velvet.61336 99.93 True fake: scaffold gap size wrong estimation (local) 74422798 74426070 1166713 1170540 NC_000014.9 velvet.61336 97.3 True fake: scaffold gap size wrong estimation (local) 74426273 74430452 1171492 1175672 NC_000014.9 velvet.61336 99.93 True fake: scaffold gap size wrong estimation (local) 74430717 74432637 1177035 1178929 NC_000014.9 velvet.61336 98.28 True fake: scaffold gap size wrong estimation (local) 74432865 74433400 1179990 1180525 NC_000014.9 velvet.61336 100.0 True local misassembly 74433670 74434826 1180526 1181682 NC_000014.9 velvet.61336 99.14 True fake: scaffold gap size wrong estimation (local) 74435117 74436243 1182855 1183981 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 74440701 74444201 1184468 1188086 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 74444596 74445479 1189309 1190192 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 74445780 74446626 1190379 1191225 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 74447600 74448840 1192909 1194149 NC_000014.9 velvet.61336 99.11 True fake: scaffold gap size wrong estimation (local) 74449664 74451520 1196226 1198082 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 74453977 74454573 1201066 1201662 NC_000014.9 velvet.61336 95.98 True relocation, scaffold gap is present, inconsistency = -17582 74437002 74438929 1201673 1203600 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (extensive) 74454727 74455421 1211669 1212363 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 74455706 74456278 1213026 1213598 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 74456550 74458352 1214115 1215917 NC_000014.9 velvet.61336 99.94 True fake: scaffold gap size wrong estimation (local) 74458655 74459262 1217083 1217690 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 74459353 74460695 1217812 1219148 NC_000014.9 velvet.61336 99.55 True fake: scaffold gap size wrong estimation (local) 74461249 74461847 1220589 1221187 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 74462460 74469239 1223736 1230781 NC_000014.9 velvet.61336 99.2 True fake: scaffold gap size wrong estimation (local) 74469550 74473272 1231497 1235827 NC_000014.9 velvet.61336 99.94 True fake: scaffold gap size wrong estimation (local) 74473404 74477062 1236627 1240407 NC_000014.9 velvet.61336 99.75 True fake: scaffold gap size wrong estimation (local) 74477154 74482912 1240582 1246683 NC_000014.9 velvet.61336 99.95 True relocation, scaffold gap is present, inconsistency = 19666075 94152482 94153458 1250178 1251154 NC_000014.9 velvet.61336 99.9 True fake: scaffold gap size wrong estimation (local) 94153619 94154457 1251439 1252296 NC_000014.9 velvet.61336 99.76 True fake: scaffold gap size wrong estimation (local) 94155845 94159082 1254211 1257513 NC_000014.9 velvet.61336 99.78 True fake: not a misassembly (possible transposable element) 74482923 74483933 1267193 1268203 NC_000014.9 velvet.61336 100.0 True fake: not a misassembly (possible transposable element) 94177104 94180613 1268538 1272417 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 94180707 94184328 1273350 1276971 NC_000014.9 velvet.61336 99.97 True fake: scaffold gap size wrong estimation (local) 94184512 94185501 1278920 1279909 NC_000014.9 velvet.61336 99.9 True fake: not a misassembly (possible transposable element) 94185492 94187036 1282838 1281294 NC_000014.9 velvet.61336 99.94 True fake: not a misassembly (possible transposable element) 94187306 94190062 1282849 1285605 NC_000014.9 velvet.61336 99.96 True relocation, scaffold gap is present, inconsistency = 26863969 67319061 67323326 1289968 1285616 NC_000014.9 velvet.61336 99.09 True fake: scaffold gap size wrong estimation (local) 67317243 67318777 1292499 1290965 NC_000014.9 velvet.61336 100.0 True relocation, scaffold gap is present, inconsistency = -7225523 74540947 74542755 1294255 1292510 NC_000014.9 velvet.61336 96.5 True relocation, scaffold gap is present, inconsistency = 23538 74516384 74517398 1294266 1295280 NC_000014.9 velvet.61336 99.9 True fake: scaffold gap size wrong estimation (local) 74517666 74520549 1296128 1299011 NC_000014.9 velvet.61336 99.86 True fake: scaffold gap size wrong estimation (local) 74520835 74536595 1300117 1315876 NC_000014.9 velvet.61336 99.52 True fake: scaffold gap size wrong estimation (local) 74538540 74539457 1318500 1319417 NC_000014.9 velvet.61336 99.89 True fake: scaffold gap size wrong estimation (local) 74539638 74540218 1319507 1320087 NC_000014.9 velvet.61336 99.66 True relocation, scaffold gap is present, inconsistency = 19669093 94210450 94214449 1321226 1325225 NC_000014.9 velvet.61336 99.83 True inversion, scaffold gap is present 94202966 94208833 1331103 1325236 NC_000014.9 velvet.61336 99.95 True relocation, scaffold gap is present, inconsistency = 11333 94220177 94232804 1331114 1343826 NC_000014.9 velvet.61336 99.84 True fake: scaffold gap size wrong estimation (local) 94233077 94235221 1344978 1347122 NC_000014.9 velvet.61336 99.86 True relocation, scaffold gap is present, inconsistency = 15529 94250761 94253187 1349559 1347133 NC_000014.9 velvet.61336 99.92 True local misassembly 94255602 94256380 1350348 1349570 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 94253437 94255320 1352786 1350903 NC_000014.9 velvet.61336 100.0 True relocation, scaffold gap is present, inconsistency = 9441 94239489 94243985 1352797 1357335 NC_000014.9 velvet.61336 99.98 True relocation, scaffold gap is present, inconsistency = -83765 94160231 94162978 1357346 1360094 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 94163181 94169925 1361100 1367846 NC_000014.9 velvet.61336 99.87 True relocation, scaffold gap is present, inconsistency = -27849484 66320452 66321334 1367857 1368722 NC_000014.9 velvet.61336 98.05 True relocation, scaffold gap is present, inconsistency = 27794533 94115878 94118375 1368733 1371284 NC_000014.9 velvet.61336 99.88 True fake: scaffold gap size wrong estimation (local) 94123232 94124944 1372594 1374306 NC_000014.9 velvet.61336 99.88 True fake: scaffold gap size wrong estimation (local) 94125066 94129651 1375039 1379622 NC_000014.9 velvet.61336 99.87 True fake: scaffold gap size wrong estimation (local) 94131995 94133245 1382433 1383652 NC_000014.9 velvet.61336 97.42 True fake: scaffold gap size wrong estimation (local) 94133567 94135192 1384665 1386290 NC_000014.9 velvet.61336 99.69 True fake: not a misassembly (possible transposable element) 66353200 66358068 1386301 1392161 NC_000014.9 velvet.61336 99.46 True fake: not a misassembly (possible transposable element) 94135372 94137744 1392172 1394559 NC_000014.9 velvet.61336 97.21 True fake: scaffold gap size wrong estimation (local) 94137964 94140481 1395510 1398067 NC_000014.9 velvet.61336 99.88 True fake: scaffold gap size wrong estimation (local) 94143546 94144130 1398078 1398662 NC_000014.9 velvet.61336 100.0 True relocation, scaffold gap is present, inconsistency = 72441 94235670 94239239 1421330 1417761 NC_000014.9 velvet.61336 99.97 True relocation, scaffold gap is present, inconsistency = 15915 94256442 94260172 1422618 1426428 NC_000014.9 velvet.61336 97.56 True fake: scaffold gap size wrong estimation (local) 94260427 94261492 1426711 1427776 NC_000014.9 velvet.61336 99.81 True fake: scaffold gap size wrong estimation (local) 94261493 94264191 1429194 1431892 NC_000014.9 velvet.61336 98.7 True fake: scaffold gap size wrong estimation (local) 94295043 94297347 1458393 1460655 NC_000014.9 velvet.61336 97.87 True fake: scaffold gap size wrong estimation (local) 94298107 94298615 1462185 1462693 NC_000014.9 velvet.61336 99.41 True fake: scaffold gap size wrong estimation (local) 94299585 94300777 1464254 1465446 NC_000014.9 velvet.61336 100.0 True fake: scaffold gap size wrong estimation (local) 94303088 94303626 1468483 1469021 NC_000014.9 velvet.61336 97.77 True fake: scaffold gap size wrong estimation (local) 94322540 94324109 1489735 1491303 NC_000014.9 velvet.61336 99.62 True relocation, scaffold gap is present, inconsistency = 74465 94420259 94420762 1512988 1513491 NC_000014.9 velvet.61336 100.0 True relocation, scaffold gap is present, inconsistency = -18466 94402307 94405156 1513502 1516351 NC_000014.9 velvet.61336 99.86 True fake: scaffold gap size wrong estimation (local) 94405665 94408188 1517646 1520169 NC_000014.9 velvet.61336 100.0 True fake: not a misassembly (possible transposable element) 94354715 94358572 1520384 1524462 NC_000014.9 velvet.61336 99.84 True fake: not a misassembly (possible transposable element) 94408220 94409408 1524473 1525661 NC_000014.9 velvet.61336 99.75 True fake: scaffold gap size wrong estimation (local) 94428810 94430954 1547575 1549723 NC_000014.9 velvet.61336 99.81 True fake: scaffold gap size wrong estimation (local) 94456218 94456771 1572043 1572596 NC_000014.9 velvet.61336 99.82 True fake: scaffold gap size wrong estimation (local) 94458607 94459862 1575065 1576367 NC_000014.9 velvet.61336 99.68 True fake: scaffold gap size wrong estimation (local) 94460104 94465564 1577116 1583245 NC_000014.9 velvet.61336 99.65 True relocation, scaffold gap is present, inconsistency = -15303 94450595 94453301 1583579 1586321 NC_000014.9 velvet.61336 98.36 True fake: scaffold gap size wrong estimation (local) 94454445 94454949 1588479 1588983 NC_000014.9 velvet.61336 99.8 True CONTIG velvet.61336 1620820 misassembled 56064963 56069354 255 4578 NC_000014.9 velvet.61338 98.45 True fake: scaffold gap size wrong estimation (local) 56069616 56071312 5572 7268 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = 19010486 75094745 75095862 21332 20215 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 75093720 75094509 22850 22061 NC_000014.9 velvet.61338 98.61 True local misassembly 75092537 75093520 23834 22851 NC_000014.9 velvet.61338 99.8 True fake: scaffold gap size wrong estimation (local) 75090567 75092021 26626 25217 NC_000014.9 velvet.61338 96.89 True relocation, scaffold gap is present, inconsistency = 85535 75179037 75179537 28107 28607 NC_000014.9 velvet.61338 100.0 True local misassembly 75179787 75180375 28608 29196 NC_000014.9 velvet.61338 98.3 True relocation, scaffold gap is present, inconsistency = 72208 75100423 75102361 36352 34414 NC_000014.9 velvet.61338 99.9 True fake: scaffold gap size wrong estimation (local) 75096830 75099505 40763 37798 NC_000014.9 velvet.61338 96.35 True fake: scaffold gap size wrong estimation (local) 75086885 75089073 44473 42285 NC_000014.9 velvet.61338 99.82 True fake: scaffold gap size wrong estimation (local) 75085262 75085906 47078 46434 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = 114724 75210883 75211439 57331 57887 NC_000014.9 velvet.61338 99.82 True fake: scaffold gap size wrong estimation (local) 75212296 75213657 58840 60201 NC_000014.9 velvet.61338 99.93 True fake: scaffold gap size wrong estimation (local) 75213958 75214934 61280 62256 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 75215164 75217033 62955 64824 NC_000014.9 velvet.61338 99.95 True relocation, scaffold gap is present, inconsistency = -34870 75185065 75185998 67726 68659 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 75193764 75194704 74412 75352 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = 103308 75076539 75079198 89262 86610 NC_000014.9 velvet.61338 99.44 True fake: scaffold gap size wrong estimation (local) 75074839 75075776 91800 90863 NC_000014.9 velvet.61338 99.79 True fake: scaffold gap size wrong estimation (local) 75068212 75073795 99196 93613 NC_000014.9 velvet.61338 99.95 True fake: scaffold gap size wrong estimation (local) 75067212 75067813 100892 100291 NC_000014.9 velvet.61338 97.84 True fake: scaffold gap size wrong estimation (local) 75064758 75066595 103474 101638 NC_000014.9 velvet.61338 99.84 True fake: scaffold gap size wrong estimation (local) 75062660 75064502 106348 104506 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 75059689 75060789 110002 108902 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 75040459 75041267 124909 124100 NC_000014.9 velvet.61338 99.51 True fake: scaffold gap size wrong estimation (local) 75039126 75039752 126195 125569 NC_000014.9 velvet.61338 99.84 True fake: scaffold gap size wrong estimation (local) 75038170 75038805 128147 127512 NC_000014.9 velvet.61338 98.11 True local misassembly 75036608 75037757 129297 128148 NC_000014.9 velvet.61338 99.04 True local misassembly 75035498 75036336 130136 129298 NC_000014.9 velvet.61338 99.88 True fake: not a misassembly (possible transposable element) 21130775 21131310 131277 131812 NC_000014.9 velvet.61338 100.0 True fake: not a misassembly (possible transposable element) 75034194 75034790 132503 131907 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 75032959 75033910 133667 132716 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = -17530 75046180 75050413 137976 133743 NC_000014.9 velvet.61338 99.98 True fake: scaffold gap size wrong estimation (local) 75045294 75045930 139658 139022 NC_000014.9 velvet.61338 98.12 True fake: scaffold gap size wrong estimation (local) 75044073 75045059 140820 139834 NC_000014.9 velvet.61338 99.9 True fake: scaffold gap size wrong estimation (local) 75043048 75043813 142257 141492 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 75041523 75042762 144184 142945 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = -27284294 102318634 102324267 151502 145734 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 102317165 102318348 153714 152531 NC_000014.9 velvet.61338 99.16 True local misassembly 102316572 102317164 154602 154010 NC_000014.9 velvet.61338 98.82 True relocation, scaffold gap is present, inconsistency = 27255809 75055362 75057688 160003 157677 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 75052217 75055071 163917 161063 NC_000014.9 velvet.61338 99.93 True fake: scaffold gap size wrong estimation (local) 75050670 75051928 165985 164727 NC_000014.9 velvet.61338 99.84 True relocation, scaffold gap is present, inconsistency = 195104 75247043 75248145 165996 167056 NC_000014.9 velvet.61338 96.16 True local misassembly 75245857 75246985 167076 168203 NC_000014.9 velvet.61338 99.73 True fake: scaffold gap size wrong estimation (local) 75248984 75250487 169924 171427 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 75250767 75251784 171968 172985 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 75252104 75252858 173958 174712 NC_000014.9 velvet.61338 100.0 True local misassembly 75252959 75253801 174713 175555 NC_000014.9 velvet.61338 98.7 True relocation, scaffold gap is present, inconsistency = -45048747 30208413 30209063 178914 179564 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = -10074 30199096 30201620 179671 182195 NC_000014.9 velvet.61338 99.92 True relocation, scaffold gap is present, inconsistency = 3451566 33657792 33662449 191519 186801 NC_000014.9 velvet.61338 99.47 True relocation, scaffold gap is present, inconsistency = 3437953 30218275 30219828 191530 193083 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 30244657 30254343 215148 225325 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 30254954 30255578 226709 227329 NC_000014.9 velvet.61338 99.35 True relocation, scaffold gap is present, inconsistency = 44971422 75228036 75228632 228365 228961 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 75228878 75231031 229506 231651 NC_000014.9 velvet.61338 99.58 True fake: scaffold gap size wrong estimation (local) 75231148 75231960 232883 233695 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 75236445 75237469 234929 235953 NC_000014.9 velvet.61338 99.71 True relocation, scaffold gap is present, inconsistency = -51814558 23422922 23423436 235964 236478 NC_000014.9 velvet.61338 100.0 True relocation, inconsistency = 75852048 99275485 99277240 236479 238234 NC_000014.9 velvet.61338 99.89 True relocation, scaffold gap is present, inconsistency = -24039364 75237887 75239655 238245 240013 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = 6286693 81527479 81531586 241144 245251 NC_000014.9 velvet.61338 99.98 True relocation, scaffold gap is present, inconsistency = 17745660 99277257 99278569 245262 246574 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = -24038226 75240354 75241351 246585 247582 NC_000014.9 velvet.61338 99.9 True fake: scaffold gap size wrong estimation (local) 75242503 75243138 248671 249306 NC_000014.9 velvet.61338 99.84 True fake: scaffold gap size wrong estimation (local) 75244212 75245346 251014 252148 NC_000014.9 velvet.61338 99.91 True relocation, scaffold gap is present, inconsistency = 24051616 99308105 99309810 263291 264996 NC_000014.9 velvet.61338 99.94 True fake: scaffold gap size wrong estimation (local) 99310118 99310938 265573 266393 NC_000014.9 velvet.61338 99.88 True fake: scaffold gap size wrong estimation (local) 99311101 99313070 267131 269086 NC_000014.9 velvet.61338 99.23 True fake: scaffold gap size wrong estimation (local) 99313338 99315566 270000 272228 NC_000014.9 velvet.61338 99.91 True relocation, scaffold gap is present, inconsistency = 2434665 101751047 101753396 275451 273044 NC_000014.9 velvet.61338 97.47 True fake: scaffold gap size wrong estimation (local) 101750285 101750795 276880 276370 NC_000014.9 velvet.61338 99.8 True fake: scaffold gap size wrong estimation (extensive) 101741209 101741843 278853 278219 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 101705229 101711807 314333 307694 NC_000014.9 velvet.61338 99.94 True relocation, scaffold gap is present, inconsistency = -38372 101736541 101740087 321393 317847 NC_000014.9 velvet.61338 99.97 True relocation, scaffold gap is present, inconsistency = 80023486 21711120 21713044 323328 321404 NC_000014.9 velvet.61338 99.79 True relocation, scaffold gap is present, inconsistency = -57542456 79242038 79253562 334919 323342 NC_000014.9 velvet.61338 99.46 True fake: scaffold gap size wrong estimation (local) 79234579 79241783 343012 335469 NC_000014.9 velvet.61338 99.87 True relocation, scaffold gap is present, inconsistency = 57538516 21676676 21681972 362458 357103 NC_000014.9 velvet.61338 99.85 True fake: scaffold gap size wrong estimation (local) 21674420 21676415 365511 363514 NC_000014.9 velvet.61338 99.7 True fake: scaffold gap size wrong estimation (local) 21673604 21674143 366419 365880 NC_000014.9 velvet.61338 99.81 True fake: scaffold gap size wrong estimation (local) 21666893 21673410 373779 367262 NC_000014.9 velvet.61338 99.91 True fake: scaffold gap size wrong estimation (local) 21664415 21666685 377076 374806 NC_000014.9 velvet.61338 99.82 True relocation, scaffold gap is present, inconsistency = -25429 21663489 21664091 403466 402829 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 21662572 21663197 404943 404318 NC_000014.9 velvet.61338 99.84 True fake: scaffold gap size wrong estimation (local) 21657862 21662307 409986 405427 NC_000014.9 velvet.61338 99.24 True fake: scaffold gap size wrong estimation (local) 21656328 21657335 412051 411044 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 21649137 21656024 419986 412953 NC_000014.9 velvet.61338 99.57 True fake: scaffold gap size wrong estimation (local) 21647118 21648866 423011 420980 NC_000014.9 velvet.61338 99.82 True fake: scaffold gap size wrong estimation (local) 21642608 21645101 428294 425801 NC_000014.9 velvet.61338 99.88 True fake: scaffold gap size wrong estimation (local) 21634822 21636267 432022 430577 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 21632846 21633912 434962 433896 NC_000014.9 velvet.61338 99.81 True fake: scaffold gap size wrong estimation (local) 21630486 21631987 438164 436603 NC_000014.9 velvet.61338 95.68 True fake: scaffold gap size wrong estimation (local) 21629462 21630374 439730 438818 NC_000014.9 velvet.61338 98.8 True local misassembly 21628487 21629310 440554 439731 NC_000014.9 velvet.61338 99.76 True relocation, scaffold gap is present, inconsistency = -10820934 32445647 32449230 444839 440745 NC_000014.9 velvet.61338 99.86 True fake: scaffold gap size wrong estimation (local) 32443408 32445381 447512 445541 NC_000014.9 velvet.61338 99.75 True relocation, scaffold gap is present, inconsistency = 10802398 21637552 21640996 451300 447526 NC_000014.9 velvet.61338 99.44 True fake: scaffold gap size wrong estimation (local) 21614026 21614559 469580 469047 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 21611767 21613672 472575 470670 NC_000014.9 velvet.61338 99.16 True fake: scaffold gap size wrong estimation (local) 21609945 21611261 475292 473976 NC_000014.9 velvet.61338 99.54 True fake: not a misassembly (possible transposable element) 32413395 32416586 478504 475315 NC_000014.9 velvet.61338 99.62 True fake: not a misassembly (possible transposable element) 21606219 21608970 482973 480222 NC_000014.9 velvet.61338 98.91 True fake: scaffold gap size wrong estimation (local) 21604586 21605513 485211 484284 NC_000014.9 velvet.61338 99.89 True fake: scaffold gap size wrong estimation (local) 21602515 21603880 487725 486360 NC_000014.9 velvet.61338 99.34 True relocation, scaffold gap is present, inconsistency = -10875118 32466740 32472872 499340 492486 NC_000014.9 velvet.61338 98.66 True relocation, scaffold gap is present, inconsistency = 72154 32381313 32386088 513184 507838 NC_000014.9 velvet.61338 95.09 True fake: scaffold gap size wrong estimation (local) 32379193 32381052 515829 513970 NC_000014.9 velvet.61338 99.78 True fake: scaffold gap size wrong estimation (local) 32376970 32378908 518626 516689 NC_000014.9 velvet.61338 99.95 True fake: scaffold gap size wrong estimation (local) 32373638 32376716 522659 519501 NC_000014.9 velvet.61338 99.84 True fake: scaffold gap size wrong estimation (local) 32370022 32373409 527372 523470 NC_000014.9 velvet.61338 96.02 True relocation, scaffold gap is present, inconsistency = -66691 32431784 32436702 532301 527383 NC_000014.9 velvet.61338 99.92 True fake: scaffold gap size wrong estimation (local) 32417090 32423189 540010 533901 NC_000014.9 velvet.61338 99.79 True fake: scaffold gap size wrong estimation (local) 32402996 32406200 550256 545875 NC_000014.9 velvet.61338 96.31 True relocation, scaffold gap is present, inconsistency = -10182 32409206 32413167 554231 550267 NC_000014.9 velvet.61338 99.45 True fake: scaffold gap size wrong estimation (local) 32400564 32402712 556402 554255 NC_000014.9 velvet.61338 99.91 True relocation, scaffold gap is present, inconsistency = -8389 32406443 32408935 558909 556420 NC_000014.9 velvet.61338 99.6 True fake: scaffold gap size wrong estimation (local) 32399126 32400213 561042 559955 NC_000014.9 velvet.61338 99.91 True fake: scaffold gap size wrong estimation (local) 32397503 32398764 562817 561556 NC_000014.9 velvet.61338 99.92 True fake: scaffold gap size wrong estimation (local) 32390045 32397363 571011 563760 NC_000014.9 velvet.61338 98.82 True fake: scaffold gap size wrong estimation (local) 32361018 32363369 595600 593249 NC_000014.9 velvet.61338 99.91 True fake: scaffold gap size wrong estimation (local) 32356039 32360102 601440 597377 NC_000014.9 velvet.61338 99.8 True fake: scaffold gap size wrong estimation (local) 32354262 32355760 604032 602545 NC_000014.9 velvet.61338 98.84 True relocation, scaffold gap is present, inconsistency = 10776531 21575777 21577720 605986 604043 NC_000014.9 velvet.61338 99.95 True fake: scaffold gap size wrong estimation (local) 21574337 21575088 608357 607608 NC_000014.9 velvet.61338 99.6 True fake: scaffold gap size wrong estimation (local) 21572614 21573179 610490 609925 NC_000014.9 velvet.61338 99.82 True fake: scaffold gap size wrong estimation (local) 21569406 21571662 614534 612278 NC_000014.9 velvet.61338 99.78 True fake: scaffold gap size wrong estimation (local) 21553124 21554152 632437 631409 NC_000014.9 velvet.61338 99.9 True relocation, scaffold gap is present, inconsistency = -39110689 60662348 60663520 633853 632730 NC_000014.9 velvet.61338 95.79 True fake: scaffold gap size wrong estimation (local) 60661209 60662064 635139 634284 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = 39108534 21550498 21551240 637282 636574 NC_000014.9 velvet.61338 95.23 True fake: scaffold gap size wrong estimation (local) 21538220 21540189 643648 641679 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 21535369 21537802 647345 644912 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 21532979 21535062 650537 648463 NC_000014.9 velvet.61338 99.42 True fake: scaffold gap size wrong estimation (local) 21530798 21531423 653869 653244 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 21529728 21530266 654563 654025 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (extensive) 21509227 21511624 683251 680828 NC_000014.9 velvet.61338 98.39 True fake: scaffold gap size wrong estimation (local) 21507618 21508586 685892 684883 NC_000014.9 velvet.61338 99.79 True fake: scaffold gap size wrong estimation (local) 21505193 21506281 688640 687562 NC_000014.9 velvet.61338 99.07 True fake: scaffold gap size wrong estimation (local) 21502996 21504653 691396 689739 NC_000014.9 velvet.61338 99.94 True relocation, scaffold gap is present, inconsistency = 16546389 38051053 38056841 691407 697194 NC_000014.9 velvet.61338 99.95 True relocation, scaffold gap is present, inconsistency = 10008 38066860 38070027 700372 697205 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 38062127 38066838 705686 701158 NC_000014.9 velvet.61338 95.89 True fake: scaffold gap size wrong estimation (local) 38061383 38061933 707547 706997 NC_000014.9 velvet.61338 97.1 True fake: scaffold gap size wrong estimation (local) 38060095 38060701 708600 707992 NC_000014.9 velvet.61338 99.18 True relocation, scaffold gap is present, inconsistency = 5913131 43973843 43976250 708611 711018 NC_000014.9 velvet.61338 99.88 True relocation, scaffold gap is present, inconsistency = 22490462 21481439 21483370 712949 711029 NC_000014.9 velvet.61338 99.22 True fake: scaffold gap size wrong estimation (local) 21479636 21480805 715727 714562 NC_000014.9 velvet.61338 99.57 True relocation, scaffold gap is present, inconsistency = -68502268 89979579 89981893 718052 715738 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 89977567 89979295 720748 719020 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = 68497153 21475532 21477983 725630 723179 NC_000014.9 velvet.61338 99.88 True fake: scaffold gap size wrong estimation (local) 21474167 21475426 727674 726421 NC_000014.9 velvet.61338 99.37 True fake: scaffold gap size wrong estimation (local) 21471936 21473598 730299 728641 NC_000014.9 velvet.61338 99.4 True fake: scaffold gap size wrong estimation (local) 21470224 21470868 732583 731939 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 21467157 21469926 736002 733178 NC_000014.9 velvet.61338 99.96 True fake: scaffold gap size wrong estimation (local) 21466404 21466911 737518 737011 NC_000014.9 velvet.61338 99.8 True fake: scaffold gap size wrong estimation (local) 21464301 21466200 739709 737756 NC_000014.9 velvet.61338 97.13 True fake: scaffold gap size wrong estimation (local) 21463518 21464116 740848 740250 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = -68493498 89949636 89951633 748192 746231 NC_000014.9 velvet.61338 98.14 True fake: scaffold gap size wrong estimation (local) 89948600 89949489 749770 748881 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = 51897463 38041618 38050750 759289 750157 NC_000014.9 velvet.61338 99.73 True fake: scaffold gap size wrong estimation (local) 38035619 38040846 770917 765690 NC_000014.9 velvet.61338 99.94 True indel: indel (> 5bp) 38033771 38035618 772772 770925 NC_000014.9 velvet.61338 99.46 True local misassembly 38027796 38028320 773815 773291 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 38019619 38027694 782046 773971 NC_000014.9 velvet.61338 99.85 True relocation, scaffold gap is present, inconsistency = 16498283 21520470 21521325 782057 782903 NC_000014.9 velvet.61338 98.7 True relocation, scaffold gap is present, inconsistency = 33174095 54695957 54700989 788472 783440 NC_000014.9 velvet.61338 99.82 True fake: scaffold gap size wrong estimation (local) 54686560 54688924 791871 789507 NC_000014.9 velvet.61338 99.87 True relocation, scaffold gap is present, inconsistency = 16676074 38009143 38010041 792316 793214 NC_000014.9 velvet.61338 100.0 True fake: not a misassembly (possible transposable element) 38010297 38015184 798124 793237 NC_000014.9 velvet.61338 99.82 True fake: not a misassembly (possible transposable element) 38015305 38019630 798135 802457 NC_000014.9 velvet.61338 99.82 True relocation, scaffold gap is present, inconsistency = 8693 38003716 38006601 805353 802468 NC_000014.9 velvet.61338 100.0 True fake: not a misassembly (possible transposable element) 54691584 54695698 805364 809637 NC_000014.9 velvet.61338 97.82 True fake: not a misassembly (possible transposable element) 37988663 37994260 815726 810177 NC_000014.9 velvet.61338 99.14 True fake: scaffold gap size wrong estimation (local) 37986934 37988502 818360 816792 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 37984953 37986716 820697 818504 NC_000014.9 velvet.61338 99.83 True fake: scaffold gap size wrong estimation (local) 37981387 37984674 824724 821384 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = 17396905 20574632 20575891 833315 834574 NC_000014.9 velvet.61338 99.6 True relocation, scaffold gap is present, inconsistency = 14117956 34693858 34695057 834585 835784 NC_000014.9 velvet.61338 99.67 True relocation, scaffold gap is present, inconsistency = -14127930 20567138 20568580 835795 837250 NC_000014.9 velvet.61338 98.63 True fake: scaffold gap size wrong estimation (extensive) 20577092 20578964 837926 839798 NC_000014.9 velvet.61338 99.89 True fake: scaffold gap size wrong estimation (local) 20589901 20593275 850043 853416 NC_000014.9 velvet.61338 99.85 True relocation, scaffold gap is present, inconsistency = 14104480 34697766 34698555 853427 854215 NC_000014.9 velvet.61338 99.75 True fake: not a misassembly (possible transposable element) 20571080 20572048 854644 855607 NC_000014.9 velvet.61338 98.75 True fake: not a misassembly (possible transposable element) 34700034 34701337 856522 857825 NC_000014.9 velvet.61338 99.92 True relocation, scaffold gap is present, inconsistency = -14122247 20579101 20581793 857836 860528 NC_000014.9 velvet.61338 99.44 True fake: scaffold gap size wrong estimation (local) 20582041 20588815 861552 868397 NC_000014.9 velvet.61338 99.21 True relocation, scaffold gap is present, inconsistency = 14112012 34705000 34705561 872570 873131 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 34707461 34708554 875784 876877 NC_000014.9 velvet.61338 99.09 True relocation, scaffold gap is present, inconsistency = 3250296 37958861 37960489 876888 878516 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 37960648 37963733 878996 882081 NC_000014.9 velvet.61338 99.97 True relocation, scaffold gap is present, inconsistency = 138852 38103701 38115322 894811 883197 NC_000014.9 velvet.61338 98.72 True fake: scaffold gap size wrong estimation (local) 38101342 38102371 897985 896951 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 38096532 38099643 904679 900600 NC_000014.9 velvet.61338 99.97 True fake: scaffold gap size wrong estimation (local) 38080740 38094220 921706 907450 NC_000014.9 velvet.61338 99.7 True fake: scaffold gap size wrong estimation (local) 38076892 38080466 926998 922785 NC_000014.9 velvet.61338 99.97 True fake: scaffold gap size wrong estimation (local) 38073746 38075254 930892 929387 NC_000014.9 velvet.61338 99.47 True relocation, scaffold gap is present, inconsistency = 27979431 66061053 66061969 937260 938176 NC_000014.9 velvet.61338 99.78 True relocation, scaffold gap is present, inconsistency = 27987309 38070137 38073733 941783 938187 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (extensive) 38058988 38060086 943474 942376 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = 63485 37994543 37995492 943485 944434 NC_000014.9 velvet.61338 100.0 True indel: indel (> 5bp) 37995493 37997484 944443 946434 NC_000014.9 velvet.61338 99.85 True fake: scaffold gap size wrong estimation (local) 37997485 38003725 948915 955155 NC_000014.9 velvet.61338 99.81 True relocation, scaffold gap is present, inconsistency = 2809841 35185345 35186091 957454 956708 NC_000014.9 velvet.61338 100.0 True local misassembly 35188962 35189826 959406 958542 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 35186720 35187428 962714 962006 NC_000014.9 velvet.61338 99.86 True fake: scaffold gap size wrong estimation (local) 35183215 35184886 966837 965166 NC_000014.9 velvet.61338 99.34 True indel: indel (<= 5bp) 35182611 35183209 967436 966838 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 35180530 35181498 970326 969358 NC_000014.9 velvet.61338 99.9 True fake: not a misassembly (possible transposable element) 37979524 37980130 970487 971093 NC_000014.9 velvet.61338 100.0 True fake: not a misassembly (possible transposable element) 35173138 35174731 972697 971104 NC_000014.9 velvet.61338 99.94 True fake: scaffold gap size wrong estimation (local) 35171194 35172035 975627 974786 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 35169718 35170833 976830 975715 NC_000014.9 velvet.61338 99.01 True indel: indel (> 5bp) 35169059 35169695 977467 976831 NC_000014.9 velvet.61338 95.76 True fake: scaffold gap size wrong estimation (local) 35166726 35169058 980624 978292 NC_000014.9 velvet.61338 99.96 True fake: scaffold gap size wrong estimation (local) 35165941 35166443 982078 981576 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 35163636 35165686 985229 982373 NC_000014.9 velvet.61338 99.95 True fake: scaffold gap size wrong estimation (local) 35157648 35163505 992018 985394 NC_000014.9 velvet.61338 99.91 True fake: scaffold gap size wrong estimation (local) 35155561 35156939 994774 993396 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = -22457 35147645 35148904 1025147 1023888 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 35146108 35147052 1026708 1025775 NC_000014.9 velvet.61338 98.72 True fake: scaffold gap size wrong estimation (local) 35143918 35145129 1029633 1028422 NC_000014.9 velvet.61338 99.92 True fake: scaffold gap size wrong estimation (local) 35139059 35141906 1035245 1032393 NC_000014.9 velvet.61338 97.98 True fake: scaffold gap size wrong estimation (local) 35136648 35138779 1038535 1036404 NC_000014.9 velvet.61338 99.95 True fake: scaffold gap size wrong estimation (local) 35133385 35135685 1042663 1040358 NC_000014.9 velvet.61338 99.96 True fake: scaffold gap size wrong estimation (extensive) 35103026 35104750 1065682 1063958 NC_000014.9 velvet.61338 99.94 True fake: scaffold gap size wrong estimation (local) 35102280 35102788 1067279 1066771 NC_000014.9 velvet.61338 98.04 True local misassembly 35101248 35102017 1068049 1067280 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 35099952 35100639 1069768 1069081 NC_000014.9 velvet.61338 99.85 True fake: scaffold gap size wrong estimation (local) 35098548 35099725 1071539 1070360 NC_000014.9 velvet.61338 99.83 True fake: scaffold gap size wrong estimation (local) 35096142 35096955 1074825 1074012 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 35093885 35094451 1079000 1078434 NC_000014.9 velvet.61338 98.06 True fake: scaffold gap size wrong estimation (local) 35087666 35089548 1087615 1085740 NC_000014.9 velvet.61338 99.58 True fake: scaffold gap size wrong estimation (local) 35086772 35087406 1089541 1088907 NC_000014.9 velvet.61338 99.84 True relocation, scaffold gap is present, inconsistency = 14462653 20621782 20624045 1089615 1091894 NC_000014.9 velvet.61338 98.64 True relocation, scaffold gap is present, inconsistency = 17341252 37965620 37966207 1092217 1092830 NC_000014.9 velvet.61338 95.44 True inversion, scaffold gap is present 37967545 37971342 1097563 1092903 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 37966213 37967000 1098882 1098096 NC_000014.9 velvet.61338 99.75 True relocation, scaffold gap is present, inconsistency = -12932 37971615 37979134 1106412 1098893 NC_000014.9 velvet.61338 99.97 True fake: scaffold gap size wrong estimation (local) 37948155 37950306 1128245 1126094 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 37946947 37947895 1130065 1129120 NC_000014.9 velvet.61338 99.26 True relocation, scaffold gap is present, inconsistency = -17634 37956427 37957840 1138219 1136806 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 37938323 37946693 1154451 1146111 NC_000014.9 velvet.61338 99.52 True fake: scaffold gap size wrong estimation (local) 37935966 37938035 1157676 1155607 NC_000014.9 velvet.61338 99.47 True fake: scaffold gap size wrong estimation (local) 37923456 37935316 1170904 1159042 NC_000014.9 velvet.61338 99.81 True fake: scaffold gap size wrong estimation (local) 37922451 37923154 1172656 1171953 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = 3256825 34664799 34665479 1172803 1173483 NC_000014.9 velvet.61338 100.0 True local misassembly 34665679 34666833 1173484 1174638 NC_000014.9 velvet.61338 99.05 True fake: scaffold gap size wrong estimation (local) 34667769 34669190 1176710 1178126 NC_000014.9 velvet.61338 99.58 True fake: scaffold gap size wrong estimation (local) 34669411 34671160 1179248 1180997 NC_000014.9 velvet.61338 99.94 True relocation, scaffold gap is present, inconsistency = 3243714 37915171 37919606 1185732 1181294 NC_000014.9 velvet.61338 99.91 True fake: scaffold gap size wrong estimation (local) 37914130 37914894 1187541 1186777 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 37904490 37914045 1197284 1187681 NC_000014.9 velvet.61338 98.52 True fake: scaffold gap size wrong estimation (local) 37891128 37904343 1211418 1198276 NC_000014.9 velvet.61338 98.44 True fake: scaffold gap size wrong estimation (local) 37887642 37890417 1216044 1213269 NC_000014.9 velvet.61338 99.21 True fake: scaffold gap size wrong estimation (local) 37886359 37887641 1218001 1216719 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 37885370 37886107 1219171 1218434 NC_000014.9 velvet.61338 97.15 True fake: scaffold gap size wrong estimation (local) 37884657 37885369 1220248 1219536 NC_000014.9 velvet.61338 99.86 True indel: indel (<= 5bp) 37882464 37884656 1222442 1220250 NC_000014.9 velvet.61338 99.54 True local misassembly 37880492 37882123 1224074 1222443 NC_000014.9 velvet.61338 96.14 True fake: scaffold gap size wrong estimation (local) 37879981 37880491 1224651 1224141 NC_000014.9 velvet.61338 96.48 True fake: scaffold gap size wrong estimation (local) 37878201 37879980 1228839 1227060 NC_000014.9 velvet.61338 99.89 True indel: indel (<= 5bp) 37874217 37878200 1232824 1228841 NC_000014.9 velvet.61338 99.87 True fake: scaffold gap size wrong estimation (local) 37863778 37872654 1241712 1232835 NC_000014.9 velvet.61338 99.97 True fake: scaffold gap size wrong estimation (local) 37843717 37862956 1263985 1243367 NC_000014.9 velvet.61338 99.72 True fake: scaffold gap size wrong estimation (local) 37841141 37843075 1267397 1265459 NC_000014.9 velvet.61338 99.54 True fake: scaffold gap size wrong estimation (local) 37822053 37832655 1279652 1268995 NC_000014.9 velvet.61338 99.86 True relocation, scaffold gap is present, inconsistency = -19237 37833055 37838806 1287883 1282136 NC_000014.9 velvet.61338 99.74 True relocation, scaffold gap is present, inconsistency = 7684464 30145082 30147609 1291392 1288865 NC_000014.9 velvet.61338 99.88 True fake: scaffold gap size wrong estimation (local) 30143638 30144845 1293398 1292191 NC_000014.9 velvet.61338 100.0 True fake: not a misassembly (possible transposable element) 37816056 37820782 1298135 1293409 NC_000014.9 velvet.61338 99.92 True fake: not a misassembly (possible transposable element) 30137002 30141072 1302216 1298146 NC_000014.9 velvet.61338 99.98 True fake: not a misassembly (possible transposable element) 37809491 37815434 1308170 1302227 NC_000014.9 velvet.61338 99.93 True fake: not a misassembly (possible transposable element) 30126533 30127719 1309368 1308181 NC_000014.9 velvet.61338 99.83 True fake: scaffold gap size wrong estimation (local) 30112924 30114435 1322579 1320946 NC_000014.9 velvet.61338 97.92 True relocation, scaffold gap is present, inconsistency = -7696327 37805897 37809240 1325933 1322590 NC_000014.9 velvet.61338 99.94 True fake: scaffold gap size wrong estimation (local) 37802992 37805686 1329559 1326873 NC_000014.9 velvet.61338 99.63 True fake: scaffold gap size wrong estimation (local) 37802189 37802727 1330841 1330303 NC_000014.9 velvet.61338 99.81 True relocation, scaffold gap is present, inconsistency = 7675665 30121708 30126513 1335730 1330852 NC_000014.9 velvet.61338 99.92 True fake: scaffold gap size wrong estimation (local) 30118068 30121583 1340574 1336630 NC_000014.9 velvet.61338 97.21 True relocation, scaffold gap is present, inconsistency = -7680309 37792787 37798366 1346164 1340585 NC_000014.9 velvet.61338 99.7 True fake: scaffold gap size wrong estimation (local) 37789691 37792781 1352869 1349779 NC_000014.9 velvet.61338 99.58 True fake: not a misassembly (possible transposable element) 30112171 30112904 1353613 1352880 NC_000014.9 velvet.61338 99.6 True fake: not a misassembly (possible transposable element) 37786741 37789617 1356520 1353614 NC_000014.9 velvet.61338 98.83 True relocation, scaffold gap is present, inconsistency = 7674926 30109975 30111804 1358360 1356531 NC_000014.9 velvet.61338 99.84 True fake: scaffold gap size wrong estimation (local) 30103402 30106956 1366781 1363276 NC_000014.9 velvet.61338 98.53 True fake: scaffold gap size wrong estimation (local) 30080384 30087173 1389940 1383144 NC_000014.9 velvet.61338 99.82 True fake: scaffold gap size wrong estimation (local) 30076332 30079976 1394754 1391132 NC_000014.9 velvet.61338 99.2 True relocation, scaffold gap is present, inconsistency = -7679111 37752101 37753729 1398097 1396468 NC_000014.9 velvet.61338 99.75 True fake: scaffold gap size wrong estimation (local) 37750845 37751817 1399825 1398853 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 37742652 37750606 1408519 1400567 NC_000014.9 velvet.61338 99.75 True relocation, scaffold gap is present, inconsistency = 7700606 30028616 30041820 1408745 1422038 NC_000014.9 velvet.61338 99.88 True relocation, scaffold gap is present, inconsistency = 15401681 45443512 45445026 1423595 1422049 NC_000014.9 velvet.61338 97.09 True fake: scaffold gap size wrong estimation (local) 45441589 45443262 1426127 1424438 NC_000014.9 velvet.61338 98.52 True fake: scaffold gap size wrong estimation (local) 45434089 45441317 1434296 1427068 NC_000014.9 velvet.61338 99.96 True relocation, scaffold gap is present, inconsistency = 15391030 30042236 30043048 1434307 1435122 NC_000014.9 velvet.61338 99.39 True inversion, scaffold gap is present 30047986 30048860 1436007 1435133 NC_000014.9 velvet.61338 99.77 True fake: scaffold gap size wrong estimation (local) 30046662 30047223 1436819 1436258 NC_000014.9 velvet.61338 99.29 True relocation, scaffold gap is present, inconsistency = 15377672 45431076 45431639 1443000 1443563 NC_000014.9 velvet.61338 98.05 True relocation, scaffold gap is present, inconsistency = -22667 45409146 45411518 1443737 1446121 NC_000014.9 velvet.61338 97.62 True fake: scaffold gap size wrong estimation (local) 45445131 45448220 1474599 1477752 NC_000014.9 velvet.61338 99.77 True fake: scaffold gap size wrong estimation (local) 45448367 45457620 1478431 1487684 NC_000014.9 velvet.61338 99.91 True relocation, scaffold gap is present, inconsistency = -15395802 30061829 30064994 1487695 1490860 NC_000014.9 velvet.61338 99.97 True fake: scaffold gap size wrong estimation (local) 30066715 30067741 1493311 1494337 NC_000014.9 velvet.61338 99.9 True fake: scaffold gap size wrong estimation (local) 30068308 30071808 1495648 1499588 NC_000014.9 velvet.61338 99.89 True fake: scaffold gap size wrong estimation (local) 30074144 30074733 1502820 1503409 NC_000014.9 velvet.61338 99.83 True relocation, scaffold gap is present, inconsistency = 7639183 37715130 37725291 1516344 1504623 NC_000014.9 velvet.61338 98.64 True fake: scaffold gap size wrong estimation (local) 37713510 37715109 1518819 1517230 NC_000014.9 velvet.61338 99.37 True fake: scaffold gap size wrong estimation (local) 37712820 37713347 1519996 1519469 NC_000014.9 velvet.61338 99.81 True local misassembly 37700752 37712756 1532232 1520234 NC_000014.9 velvet.61338 99.88 True fake: scaffold gap size wrong estimation (local) 37695830 37700459 1537972 1533343 NC_000014.9 velvet.61338 99.94 True fake: scaffold gap size wrong estimation (local) 37679952 37681977 1548810 1546785 NC_000014.9 velvet.61338 99.95 True fake: scaffold gap size wrong estimation (local) 37672816 37679731 1557782 1549879 NC_000014.9 velvet.61338 96.17 True relocation, scaffold gap is present, inconsistency = -22401 37692955 37695026 1559980 1557973 NC_000014.9 velvet.61338 96.59 True fake: scaffold gap size wrong estimation (local) 37689262 37691074 1564334 1562522 NC_000014.9 velvet.61338 99.83 True inversion, scaffold gap is present 37687672 37689274 1566148 1567750 NC_000014.9 velvet.61338 99.94 True fake: scaffold gap size wrong estimation (local) 37691319 37692231 1570192 1571085 NC_000014.9 velvet.61338 97.79 True inversion, scaffold gap is present 37665436 37667854 1597624 1595238 NC_000014.9 velvet.61338 98.67 True fake: scaffold gap size wrong estimation (local) 37663099 37663942 1600831 1599988 NC_000014.9 velvet.61338 99.88 True fake: scaffold gap size wrong estimation (local) 37657351 37659119 1608327 1606619 NC_000014.9 velvet.61338 96.49 True fake: scaffold gap size wrong estimation (local) 37651701 37656926 1615676 1609559 NC_000014.9 velvet.61338 98.48 True fake: scaffold gap size wrong estimation (local) 37638517 37639578 1629279 1628218 NC_000014.9 velvet.61338 99.91 True fake: scaffold gap size wrong estimation (local) 37636003 37638319 1632535 1630219 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 37633544 37635694 1635811 1633661 NC_000014.9 velvet.61338 99.54 True relocation, scaffold gap is present, inconsistency = -54489 37686845 37687638 1636999 1636206 NC_000014.9 velvet.61338 99.87 True fake: scaffold gap size wrong estimation (local) 37682448 37686526 1642186 1638108 NC_000014.9 velvet.61338 99.85 True relocation, scaffold gap is present, inconsistency = -10422 37670737 37672811 1664317 1662245 NC_000014.9 velvet.61338 99.81 True fake: scaffold gap size wrong estimation (local) 37668135 37670465 1667572 1665242 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 37643271 37651381 1690490 1682380 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 37640805 37643023 1693765 1691547 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 37639925 37640596 1695301 1694630 NC_000014.9 velvet.61338 100.0 True fake: not a misassembly (possible transposable element) 31677632 31678316 1695996 1695312 NC_000014.9 velvet.61338 100.0 True fake: not a misassembly (possible transposable element) 37632444 37632983 1696546 1696007 NC_000014.9 velvet.61338 99.81 True fake: scaffold gap size wrong estimation (local) 37625560 37627321 1704891 1703127 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 37616956 37624650 1714647 1706692 NC_000014.9 velvet.61338 99.99 True fake: scaffold gap size wrong estimation (local) 37615014 37616570 1717376 1715820 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 37608568 37614897 1724347 1718019 NC_000014.9 velvet.61338 99.94 True fake: not a misassembly (possible transposable element) 37596048 37596734 1725835 1725149 NC_000014.9 velvet.61338 100.0 True fake: not a misassembly (possible transposable element) 37605887 37607600 1727818 1726105 NC_000014.9 velvet.61338 99.36 True local misassembly 37597526 37605886 1737802 1729442 NC_000014.9 velvet.61338 99.61 True fake: scaffold gap size wrong estimation (local) 37596764 37597525 1738661 1737900 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 37574753 37577149 1760377 1757982 NC_000014.9 velvet.61338 99.83 True relocation, scaffold gap is present, inconsistency = -14086 37577237 37588828 1772857 1760388 NC_000014.9 velvet.61338 99.95 True fake: scaffold gap size wrong estimation (extensive) 37561956 37569743 1780655 1772868 NC_000014.9 velvet.61338 99.99 True relocation, scaffold gap is present, inconsistency = -35597136 73152920 73153699 1786827 1786048 NC_000014.9 velvet.61338 100.0 True fake: not a misassembly (possible transposable element) 50327725 50328887 1788332 1789494 NC_000014.9 velvet.61338 99.14 True fake: not a misassembly (possible transposable element) 73151048 73151680 1790156 1789524 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = 47465978 25683205 25683981 1792021 1791245 NC_000014.9 velvet.61338 99.87 True fake: not a misassembly (possible transposable element) 25644622 25645996 1792032 1793406 NC_000014.9 velvet.61338 99.27 True fake: not a misassembly (possible transposable element) 25673427 25677876 1798093 1793644 NC_000014.9 velvet.61338 99.93 True fake: scaffold gap size wrong estimation (local) 25671360 25673330 1800822 1798852 NC_000014.9 velvet.61338 99.85 True fake: scaffold gap size wrong estimation (local) 25655469 25671028 1818144 1801571 NC_000014.9 velvet.61338 99.86 True fake: scaffold gap size wrong estimation (local) 25647917 25655133 1826568 1819171 NC_000014.9 velvet.61338 99.65 True fake: scaffold gap size wrong estimation (local) 25647287 25647803 1827873 1827357 NC_000014.9 velvet.61338 97.87 True relocation, scaffold gap is present, inconsistency = 24680743 50329068 50330979 1828395 1830306 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = 22813055 73154569 73155622 1840841 1841894 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = 22463685 50687214 50690781 1845507 1841997 NC_000014.9 velvet.61338 98.12 True relocation, scaffold gap is present, inconsistency = 350110 50335330 50337093 1845518 1847281 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = -2833826 47507028 47508379 1851042 1852393 NC_000014.9 velvet.61338 99.85 True relocation, scaffold gap is present, inconsistency = 2852441 50360831 50361864 1852404 1853436 NC_000014.9 velvet.61338 99.9 True relocation, scaffold gap is present, inconsistency = -2862194 47499681 47502801 1853447 1856567 NC_000014.9 velvet.61338 99.97 True fake: scaffold gap size wrong estimation (local) 47503724 47506772 1858283 1861331 NC_000014.9 velvet.61338 99.93 True relocation, scaffold gap is present, inconsistency = 2854937 50364486 50365673 1864108 1865295 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = -11349956 39015728 39016640 1865306 1866218 NC_000014.9 velvet.61338 99.89 True relocation, scaffold gap is present, inconsistency = 11339769 50366147 50368243 1875956 1878013 NC_000014.9 velvet.61338 98.13 True fake: scaffold gap size wrong estimation (local) 50375035 50375610 1880820 1881395 NC_000014.9 velvet.61338 100.0 True local misassembly 50371533 50372126 1881406 1881999 NC_000014.9 velvet.61338 100.0 True local misassembly 50370258 50371280 1882372 1883394 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = -2847314 47537458 47540045 1896886 1899457 NC_000014.9 velvet.61338 99.3 True relocation, scaffold gap is present, inconsistency = 2833835 50373891 50374908 1899468 1900485 NC_000014.9 velvet.61338 100.0 True local misassembly 50372422 50373871 1900496 1901945 NC_000014.9 velvet.61338 99.86 True fake: scaffold gap size wrong estimation (local) 50379146 50381778 1901956 1904587 NC_000014.9 velvet.61338 99.89 True fake: scaffold gap size wrong estimation (local) 50385831 50386710 1904598 1905477 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 50388181 50388846 1906620 1907285 NC_000014.9 velvet.61338 100.0 True local misassembly 50389129 50389995 1907377 1908243 NC_000014.9 velvet.61338 98.85 True relocation, scaffold gap is present, inconsistency = -7314 50383604 50385004 1909166 1910655 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 50391689 50392213 1911405 1911929 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = -2842846 47549378 47559589 1911940 1922586 NC_000014.9 velvet.61338 99.71 True relocation, scaffold gap is present, inconsistency = 2844202 50405213 50406455 1924008 1925250 NC_000014.9 velvet.61338 99.84 True fake: scaffold gap size wrong estimation (local) 50406864 50407768 1926461 1927365 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 50408056 50408561 1927681 1928186 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = -2847680 47571869 47576877 1939174 1944182 NC_000014.9 velvet.61338 99.94 True relocation, scaffold gap is present, inconsistency = 42891635 90471397 90473993 1947067 1950478 NC_000014.9 velvet.61338 99.65 True relocation, scaffold gap is present, inconsistency = -40051681 50424741 50426493 1952907 1954657 NC_000014.9 velvet.61338 99.89 True relocation, scaffold gap is present, inconsistency = -9561 50417550 50421289 1955275 1959107 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (extensive) 50428541 50431269 1959118 1961846 NC_000014.9 velvet.61338 99.93 True fake: scaffold gap size wrong estimation (local) 50431875 50432863 1962944 1963918 NC_000014.9 velvet.61338 98.57 True fake: scaffold gap size wrong estimation (local) 50433139 50435468 1965156 1967485 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 50435610 50441721 1968516 1974591 NC_000014.9 velvet.61338 98.1 True fake: scaffold gap size wrong estimation (local) 50441809 50445615 1975472 1979337 NC_000014.9 velvet.61338 99.92 True fake: scaffold gap size wrong estimation (local) 50445808 50448027 1980316 1982533 NC_000014.9 velvet.61338 99.91 True fake: scaffold gap size wrong estimation (local) 50448276 50449965 1983260 1984949 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 50450111 50461099 1985725 1997530 NC_000014.9 velvet.61338 98.95 True fake: scaffold gap size wrong estimation (local) 50461949 50463630 1999145 2000826 NC_000014.9 velvet.61338 99.94 True relocation, scaffold gap is present, inconsistency = 13025976 63489617 63490422 2001642 2000837 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = -11242 63499731 63500848 2002769 2001653 NC_000014.9 velvet.61338 99.91 True fake: scaffold gap size wrong estimation (local) 63497749 63499441 2005401 2003708 NC_000014.9 velvet.61338 99.88 True fake: scaffold gap size wrong estimation (local) 63496446 63497491 2007194 2006149 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = 13019416 50463786 50465824 2018400 2020460 NC_000014.9 velvet.61338 99.74 True fake: scaffold gap size wrong estimation (local) 50466011 50473739 2020495 2029099 NC_000014.9 velvet.61338 99.48 True fake: scaffold gap size wrong estimation (local) 50474010 50476329 2030342 2032651 NC_000014.9 velvet.61338 99.48 True fake: scaffold gap size wrong estimation (local) 50476767 50479003 2033977 2036211 NC_000014.9 velvet.61338 99.82 True fake: scaffold gap size wrong estimation (local) 50479217 50480403 2037342 2038528 NC_000014.9 velvet.61338 99.92 True fake: scaffold gap size wrong estimation (local) 50496851 50499405 2049220 2051774 NC_000014.9 velvet.61338 99.96 True fake: scaffold gap size wrong estimation (extensive) 50506493 50507303 2051785 2052595 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = -10673 50499792 50506451 2055757 2062416 NC_000014.9 velvet.61338 99.91 True relocation, scaffold gap is present, inconsistency = 3325975 53832437 53833103 2062427 2063093 NC_000014.9 velvet.61338 99.7 True indel: indel (<= 5bp) 53833363 53837408 2063350 2067395 NC_000014.9 velvet.61338 99.8 True local misassembly 53842446 53844753 2067396 2069703 NC_000014.9 velvet.61338 99.39 True indel: stretch of mismatches 53844990 53846094 2069940 2071044 NC_000014.9 velvet.61338 99.28 True fake: scaffold gap size wrong estimation (local) 53846095 53846790 2071140 2071835 NC_000014.9 velvet.61338 97.41 True indel: indel (<= 5bp) 53846791 53847460 2071837 2072506 NC_000014.9 velvet.61338 99.7 True fake: scaffold gap size wrong estimation (local) 53847739 53855780 2073523 2082436 NC_000014.9 velvet.61338 99.68 True fake: scaffold gap size wrong estimation (local) 53878651 53883349 2106880 2112494 NC_000014.9 velvet.61338 99.87 True fake: scaffold gap size wrong estimation (local) 53888611 53892055 2112505 2116367 NC_000014.9 velvet.61338 99.82 True fake: scaffold gap size wrong estimation (local) 53892358 53895006 2117228 2119876 NC_000014.9 velvet.61338 99.85 True relocation, scaffold gap is present, inconsistency = -5576119 48318898 48319556 2119887 2120545 NC_000014.9 velvet.61338 99.85 True fake: scaffold gap size wrong estimation (local) 48319728 48325125 2121204 2126601 NC_000014.9 velvet.61338 99.98 True fake: scaffold gap size wrong estimation (local) 48325424 48327618 2127765 2129947 NC_000014.9 velvet.61338 99.41 True relocation, scaffold gap is present, inconsistency = 5556779 53895329 53898318 2140879 2143868 NC_000014.9 velvet.61338 99.9 True fake: scaffold gap size wrong estimation (local) 53898588 53899816 2144669 2145897 NC_000014.9 velvet.61338 99.59 True fake: scaffold gap size wrong estimation (local) 53900297 53903684 2146919 2150404 NC_000014.9 velvet.61338 96.42 True fake: scaffold gap size wrong estimation (local) 53903879 53908962 2151264 2156441 NC_000014.9 velvet.61338 99.88 True fake: not a misassembly (possible transposable element) 48360707 48362953 2156452 2158698 NC_000014.9 velvet.61338 100.0 True fake: not a misassembly (possible transposable element) 53911475 53914975 2162118 2165618 NC_000014.9 velvet.61338 99.89 True fake: scaffold gap size wrong estimation (local) 53915182 53915834 2166467 2167119 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = -31818 53884027 53885172 2167130 2168275 NC_000014.9 velvet.61338 100.0 True fake: scaffold gap size wrong estimation (local) 53885194 53887239 2171546 2173591 NC_000014.9 velvet.61338 99.95 True relocation, scaffold gap is present, inconsistency = 11106097 42775112 42779086 2177617 2173602 NC_000014.9 velvet.61338 98.8 True fake: scaffold gap size wrong estimation (local) 42771872 42772698 2181623 2180832 NC_000014.9 velvet.61338 95.59 True fake: scaffold gap size wrong estimation (local) 42766575 42771741 2187916 2182751 NC_000014.9 velvet.61338 99.83 True relocation, scaffold gap is present, inconsistency = -30861 42788166 42795050 2197072 2190302 NC_000014.9 velvet.61338 97.77 True fake: scaffold gap size wrong estimation (local) 42786592 42787681 2199803 2198715 NC_000014.9 velvet.61338 99.27 True fake: scaffold gap size wrong estimation (local) 42750177 42752547 2230243 2227873 NC_000014.9 velvet.61338 99.96 True fake: scaffold gap size wrong estimation (local) 42744938 42749898 2236456 2231300 NC_000014.9 velvet.61338 99.84 True fake: scaffold gap size wrong estimation (local) 42743581 42744371 2238590 2237800 NC_000014.9 velvet.61338 95.45 True fake: scaffold gap size wrong estimation (local) 42742485 42743098 2239868 2239255 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = 11172455 53916331 53917630 2240646 2241945 NC_000014.9 velvet.61338 100.0 True fake: not a misassembly (possible transposable element) 37223791 37224484 2244105 2244798 NC_000014.9 velvet.61338 99.86 True fake: not a misassembly (possible transposable element) 53920036 53922953 2244809 2247726 NC_000014.9 velvet.61338 99.93 True fake: not a misassembly (possible transposable element) 37226752 37228848 2248108 2250254 NC_000014.9 velvet.61338 100.0 True fake: not a misassembly (possible transposable element) 53928014 53928597 2250414 2250997 NC_000014.9 velvet.61338 99.83 True relocation, scaffold gap is present, inconsistency = -7160 53923087 53926072 2252647 2255638 NC_000014.9 velvet.61338 99.6 True relocation, scaffold gap is present, inconsistency = -8430 53917654 53920018 2255650 2258830 NC_000014.9 velvet.61338 99.91 True relocation, scaffold gap is present, inconsistency = -16690952 37229077 37234365 2258841 2264988 NC_000014.9 velvet.61338 99.75 True fake: scaffold gap size wrong estimation (local) 37235092 37235943 2265884 2266735 NC_000014.9 velvet.61338 99.65 True fake: scaffold gap size wrong estimation (local) 37236730 37238686 2268223 2270158 NC_000014.9 velvet.61338 98.92 True fake: scaffold gap size wrong estimation (local) 37239348 37244127 2271698 2278057 NC_000014.9 velvet.61338 98.35 True relocation, scaffold gap is present, inconsistency = 16681143 53926238 53927966 2279025 2280754 NC_000014.9 velvet.61338 99.71 True fake: scaffold gap size wrong estimation (local) 53929623 53933477 2283191 2287045 NC_000014.9 velvet.61338 99.87 True relocation, scaffold gap is present, inconsistency = -5536816 48399976 48406374 2290360 2297466 NC_000014.9 velvet.61338 99.47 True indel: indel (> 5bp) 48406708 48407421 2297773 2298486 NC_000014.9 velvet.61338 98.32 True relocation, scaffold gap is present, inconsistency = 5525825 53933686 53937137 2298926 2302482 NC_000014.9 velvet.61338 96.85 True fake: scaffold gap size wrong estimation (local) 53937410 53945639 2303555 2311784 NC_000014.9 velvet.61338 99.93 True fake: scaffold gap size wrong estimation (local) 53947177 53949046 2314035 2315903 NC_000014.9 velvet.61338 99.79 True fake: scaffold gap size wrong estimation (local) 53949188 53961222 2316742 2328904 NC_000014.9 velvet.61338 99.77 True fake: not a misassembly (possible transposable element) 53945662 53947168 2328915 2330421 NC_000014.9 velvet.61338 99.87 True fake: not a misassembly (possible transposable element) 53961505 53967274 2330433 2336262 NC_000014.9 velvet.61338 99.88 True fake: scaffold gap size wrong estimation (local) 53967550 53968245 2337304 2337999 NC_000014.9 velvet.61338 99.86 True fake: scaffold gap size wrong estimation (local) 53968557 53969979 2338286 2339708 NC_000014.9 velvet.61338 99.86 True fake: scaffold gap size wrong estimation (local) 53970696 53976009 2341195 2346508 NC_000014.9 velvet.61338 99.89 True fake: scaffold gap size wrong estimation (local) 53976275 53976788 2347468 2347981 NC_000014.9 velvet.61338 99.22 True fake: scaffold gap size wrong estimation (local) 53977398 53984984 2348671 2357159 NC_000014.9 velvet.61338 99.8 True fake: scaffold gap size wrong estimation (local) 53987003 53989944 2360609 2363577 NC_000014.9 velvet.61338 98.89 True fake: scaffold gap size wrong estimation (local) 53990218 53992087 2364576 2366401 NC_000014.9 velvet.61338 97.57 True fake: scaffold gap size wrong estimation (local) 53992368 53999623 2367489 2375722 NC_000014.9 velvet.61338 99.8 True fake: scaffold gap size wrong estimation (extensive) 53999898 54004281 2383766 2388259 NC_000014.9 velvet.61338 99.89 True fake: scaffold gap size wrong estimation (local) 54006103 54007370 2390751 2392018 NC_000014.9 velvet.61338 99.92 True fake: scaffold gap size wrong estimation (local) 54007683 54013162 2392913 2399522 NC_000014.9 velvet.61338 99.96 True fake: scaffold gap size wrong estimation (local) 54038530 54055130 2424545 2442177 NC_000014.9 velvet.61338 99.91 True relocation, scaffold gap is present, inconsistency = -42240 54013912 54015781 2443199 2445082 NC_000014.9 velvet.61338 97.77 True fake: scaffold gap size wrong estimation (local) 54016147 54018452 2446479 2448753 NC_000014.9 velvet.61338 95.92 True fake: not a misassembly (possible transposable element) 54033836 54037322 2450920 2454458 NC_000014.9 velvet.61338 98.08 True fake: not a misassembly (possible transposable element) 54021183 54025222 2457343 2461671 NC_000014.9 velvet.61338 99.9 True fake: scaffold gap size wrong estimation (local) 54025418 54027717 2462465 2464764 NC_000014.9 velvet.61338 99.91 True fake: scaffold gap size wrong estimation (local) 54056011 54065799 2493473 2503956 NC_000014.9 velvet.61338 99.66 True fake: scaffold gap size wrong estimation (local) 54065896 54067601 2504855 2506560 NC_000014.9 velvet.61338 99.94 True relocation, scaffold gap is present, inconsistency = 31304191 85371803 85375490 2510258 2506571 NC_000014.9 velvet.61338 99.62 True relocation, scaffold gap is present, inconsistency = 31289278 54069087 54069696 2523087 2523696 NC_000014.9 velvet.61338 99.67 True local misassembly 54069877 54070796 2523697 2524616 NC_000014.9 velvet.61338 95.0 True fake: scaffold gap size wrong estimation (local) 54078211 54080109 2527137 2529035 NC_000014.9 velvet.61338 99.79 True fake: not a misassembly (possible transposable element) 54074583 54078150 2532615 2529048 NC_000014.9 velvet.61338 99.72 True fake: not a misassembly (possible transposable element) 54080381 54097017 2533859 2551852 NC_000014.9 velvet.61338 99.79 True fake: scaffold gap size wrong estimation (local) 54097785 54099889 2553062 2555166 NC_000014.9 velvet.61338 99.9 True fake: scaffold gap size wrong estimation (local) 54100128 54103205 2556216 2559279 NC_000014.9 velvet.61338 99.35 True fake: scaffold gap size wrong estimation (local) 54103498 54107851 2560354 2564713 NC_000014.9 velvet.61338 99.52 True fake: scaffold gap size wrong estimation (local) 54108113 54109652 2565596 2567135 NC_000014.9 velvet.61338 99.94 True fake: scaffold gap size wrong estimation (local) 54109925 54113543 2568031 2571766 NC_000014.9 velvet.61338 98.02 True fake: scaffold gap size wrong estimation (local) 54123569 54125520 2576792 2578744 NC_000014.9 velvet.61338 99.44 True fake: scaffold gap size wrong estimation (local) 54125715 54130176 2579801 2584194 NC_000014.9 velvet.61338 98.02 True fake: scaffold gap size wrong estimation (local) 54131403 54134908 2586204 2589709 NC_000014.9 velvet.61338 99.74 True fake: scaffold gap size wrong estimation (local) 54135183 54140156 2590776 2595749 NC_000014.9 velvet.61338 99.8 True relocation, scaffold gap is present, inconsistency = 25058826 79199167 79200823 2597590 2595934 NC_000014.9 velvet.61338 99.82 True fake: scaffold gap size wrong estimation (local) 79193039 79199060 2604373 2598354 NC_000014.9 velvet.61338 99.88 True fake: scaffold gap size wrong estimation (local) 79192137 79192758 2605688 2605067 NC_000014.9 velvet.61338 99.68 True fake: scaffold gap size wrong estimation (local) 79189540 79192036 2608831 2606335 NC_000014.9 velvet.61338 99.92 True relocation, scaffold gap is present, inconsistency = 26522846 52665329 52666683 2608842 2610196 NC_000014.9 velvet.61338 99.93 True relocation, scaffold gap is present, inconsistency = 1669215 54336899 54339413 2613711 2611197 NC_000014.9 velvet.61338 99.96 True relocation, scaffold gap is present, inconsistency = -24850952 79181684 79182261 2619878 2619301 NC_000014.9 velvet.61338 99.83 True relocation, scaffold gap is present, inconsistency = 29864688 49316348 49316985 2620526 2619889 NC_000014.9 velvet.61338 98.43 True local misassembly 49315287 49316078 2621318 2620527 NC_000014.9 velvet.61338 99.87 True relocation, scaffold gap is present, inconsistency = -5012243 54314200 54318742 2634747 2630106 NC_000014.9 velvet.61338 99.53 True relocation, scaffold gap is present, inconsistency = -24867208 79175254 79181397 2640954 2634758 NC_000014.9 velvet.61338 99.93 True fake: scaffold gap size wrong estimation (local) 79173520 79174496 2643559 2642583 NC_000014.9 velvet.61338 98.77 True indel: indel (> 5bp) 79172173 79173301 2644871 2643743 NC_000014.9 velvet.61338 97.96 True fake: scaffold gap size wrong estimation (local) 79167929 79171799 2649907 2646037 NC_000014.9 velvet.61338 99.66 True fake: scaffold gap size wrong estimation (local) 79162700 79167928 2661421 2656193 NC_000014.9 velvet.61338 99.77 True fake: not a misassembly (possible transposable element) 24937140 24940770 2661666 2665451 NC_000014.9 velvet.61338 99.86 True fake: not a misassembly (possible transposable element) 79149806 79162087 2678470 2666016 NC_000014.9 velvet.61338 99.48 True relocation, scaffold gap is present, inconsistency = 54182671 24962610 24963994 2681611 2682995 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = 29241036 54205152 54207063 2683117 2685092 NC_000014.9 velvet.61338 95.21 True relocation, scaffold gap is present, inconsistency = 4908598 49281607 49296543 2700814 2685103 NC_000014.9 velvet.61338 99.85 True fake: scaffold gap size wrong estimation (local) 49275533 49278545 2703837 2700825 NC_000014.9 velvet.61338 100.0 True local misassembly 49279532 49281341 2705657 2703848 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = -5006990 54282657 54286511 2709522 2705668 NC_000014.9 velvet.61338 99.95 True fake: scaffold gap size wrong estimation (local) 54280917 54282483 2712085 2710559 NC_000014.9 velvet.61338 97.2 True relocation, scaffold gap is present, inconsistency = 37929 54239999 54242977 2712096 2715074 NC_000014.9 velvet.61338 99.97 True fake: scaffold gap size wrong estimation (local) 54246037 54247631 2715085 2716679 NC_000014.9 velvet.61338 99.94 True local misassembly 54243085 54246035 2716690 2720073 NC_000014.9 velvet.61338 99.86 True relocation, scaffold gap is present, inconsistency = -5006737 49252881 49253790 2733656 2734565 NC_000014.9 velvet.61338 99.78 True fake: scaffold gap size wrong estimation (local) 49253933 49255923 2734711 2736740 NC_000014.9 velvet.61338 95.87 True inversion, scaffold gap is present 49248129 49252845 2741468 2736751 NC_000014.9 velvet.61338 99.98 True inversion, scaffold gap is present 49255950 49256524 2744056 2744659 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = 4943473 54200767 54202185 2746847 2745429 NC_000014.9 velvet.61338 99.93 True fake: scaffold gap size wrong estimation (local) 54198887 54200456 2749561 2747993 NC_000014.9 velvet.61338 99.87 True indel: indel (<= 5bp) 54195665 54198758 2752678 2749692 NC_000014.9 velvet.61338 96.27 True fake: scaffold gap size wrong estimation (local) 54191122 54195427 2758067 2753712 NC_000014.9 velvet.61338 99.81 True fake: scaffold gap size wrong estimation (local) 54189065 54190834 2760923 2759154 NC_000014.9 velvet.61338 99.94 True fake: scaffold gap size wrong estimation (local) 54176514 54188651 2775194 2761690 NC_000014.9 velvet.61338 99.73 True fake: scaffold gap size wrong estimation (local) 54164246 54176235 2788301 2776312 NC_000014.9 velvet.61338 99.92 True fake: not a misassembly (possible transposable element) 54150080 54150824 2792115 2791371 NC_000014.9 velvet.61338 98.52 True fake: not a misassembly (possible transposable element) 54162625 54164137 2794423 2792911 NC_000014.9 velvet.61338 99.8 True fake: scaffold gap size wrong estimation (local) 54155889 54161226 2802024 2796604 NC_000014.9 velvet.61338 98.65 True fake: scaffold gap size wrong estimation (local) 54153133 54153968 2805514 2804679 NC_000014.9 velvet.61338 99.88 True relocation, scaffold gap is present, inconsistency = 11425 54140403 54141697 2805525 2806819 NC_000014.9 velvet.61338 99.92 True fake: scaffold gap size wrong estimation (local) 54145558 54146784 2807466 2808692 NC_000014.9 velvet.61338 99.84 True fake: scaffold gap size wrong estimation (local) 54146790 54148483 2809931 2811582 NC_000014.9 velvet.61338 97.21 True relocation, scaffold gap is present, inconsistency = -35958 54113564 54122721 2812621 2821845 NC_000014.9 velvet.61338 99.41 True fake: scaffold gap size wrong estimation (local) 54130206 54130828 2825756 2826378 NC_000014.9 velvet.61338 100.0 True relocation, scaffold gap is present, inconsistency = -10519 54141980 54145336 2848049 2851405 NC_000014.9 velvet.61338 99.85 True CONTIG velvet.61338 2852489 misassembled 102845988 102846554 567 1 NC_000014.9 velvet.61343 100.0 True CONTIG velvet.61343 567 correct 106634938 106638311 3551 178 NC_000014.9 velvet.61345 99.82 True fake: scaffold gap size wrong estimation (local) 106631535 106634755 7772 4552 NC_000014.9 velvet.61345 100.0 True fake: scaffold gap size wrong estimation (local) 106598672 106600521 40541 38751 NC_000014.9 velvet.61345 96.52 True relocation, scaffold gap is present, inconsistency = 36933 106638429 106639101 41516 42188 NC_000014.9 velvet.61345 99.41 True fake: scaffold gap size wrong estimation (local) 106673810 106674551 72714 73435 NC_000014.9 velvet.61345 96.58 True fake: scaffold gap size wrong estimation (local) 106695799 106698107 94394 96711 NC_000014.9 velvet.61345 99.57 True fake: scaffold gap size wrong estimation (local) 106698269 106705255 97524 104461 NC_000014.9 velvet.61345 98.91 True relocation, scaffold gap is present, inconsistency = 45816 106774114 106774735 127504 128125 NC_000014.9 velvet.61345 98.87 True fake: scaffold gap size wrong estimation (local) 106775865 106776589 130406 131130 NC_000014.9 velvet.61345 99.59 True relocation, scaffold gap is present, inconsistency = -13814 106763705 106764238 132060 132593 NC_000014.9 velvet.61345 99.81 True fake: scaffold gap size wrong estimation (local) 106764696 106766117 134250 135671 NC_000014.9 velvet.61345 100.0 True relocation, scaffold gap is present, inconsistency = -229902 106539430 106540532 138886 139981 NC_000014.9 velvet.61345 98.55 True relocation, scaffold gap is present, inconsistency = 237508 106778051 106778673 139992 140614 NC_000014.9 velvet.61345 99.52 True local misassembly 106776640 106777398 140625 141383 NC_000014.9 velvet.61345 99.6 True fake: scaffold gap size wrong estimation (local) 106778913 106779659 143256 144002 NC_000014.9 velvet.61345 99.6 True fake: scaffold gap size wrong estimation (local) 106803162 106806727 167260 171288 NC_000014.9 velvet.61345 99.94 True fake: scaffold gap size wrong estimation (local) 106807012 106810669 172015 175672 NC_000014.9 velvet.61345 99.86 True relocation, scaffold gap is present, inconsistency = -558612 106252068 106253483 175683 177098 NC_000014.9 velvet.61345 99.72 True relocation, scaffold gap is present, inconsistency = 219451 106498779 106507552 212514 202943 NC_000014.9 velvet.61345 99.25 True relocation, scaffold gap is present, inconsistency = 64307 106431988 106434432 212554 215000 NC_000014.9 velvet.61345 98.53 True fake: not a misassembly (possible transposable element) 106434641 106435465 215904 215079 NC_000014.9 velvet.61345 99.39 True fake: not a misassembly (possible transposable element) 106436238 106438178 217601 219541 NC_000014.9 velvet.61345 99.02 True fake: scaffold gap size wrong estimation (local) 106438640 106442640 220771 224771 NC_000014.9 velvet.61345 99.58 True relocation, scaffold gap is present, inconsistency = 64508 106507646 106508607 225269 226229 NC_000014.9 velvet.61345 99.69 True relocation, scaffold gap is present, inconsistency = 27792 106476272 106477182 229811 228901 NC_000014.9 velvet.61345 99.67 True relocation, scaffold gap is present, inconsistency = 31317 106444404 106444944 229822 230362 NC_000014.9 velvet.61345 98.89 True fake: scaffold gap size wrong estimation (local) 106445613 106446224 230973 231584 NC_000014.9 velvet.61345 99.35 True indel: indel (<= 5bp) 106446230 106447566 231585 232921 NC_000014.9 velvet.61345 98.65 True inversion, scaffold gap is present 106453634 106455330 235644 233937 NC_000014.9 velvet.61345 99.65 True fake: scaffold gap size wrong estimation (local) 106451036 106453380 239162 236800 NC_000014.9 velvet.61345 99.07 True fake: scaffold gap size wrong estimation (local) 106447616 106450595 243458 240479 NC_000014.9 velvet.61345 99.87 True relocation, scaffold gap is present, inconsistency = 11987 106475316 106476034 256192 256910 NC_000014.9 velvet.61345 100.0 True fake: scaffold gap size wrong estimation (local) 106509208 106515117 289258 295124 NC_000014.9 velvet.61345 99.01 True fake: scaffold gap size wrong estimation (local) 106517399 106518113 298114 298828 NC_000014.9 velvet.61345 99.72 True fake: scaffold gap size wrong estimation (local) 106518919 106522341 300075 303544 NC_000014.9 velvet.61345 96.51 True fake: scaffold gap size wrong estimation (local) 106522479 106523511 304078 305145 NC_000014.9 velvet.61345 97.05 True fake: scaffold gap size wrong estimation (local) 106526855 106527858 305156 306159 NC_000014.9 velvet.61345 99.9 True local misassembly 106528047 106529077 306160 307190 NC_000014.9 velvet.61345 98.74 True local misassembly 106524088 106525799 307201 308911 NC_000014.9 velvet.61345 99.88 True fake: scaffold gap size wrong estimation (local) 106529320 106533399 308922 313061 NC_000014.9 velvet.61345 98.31 True relocation, scaffold gap is present, inconsistency = 7602 106568178 106569278 341338 340238 NC_000014.9 velvet.61345 99.91 True fake: not a misassembly (possible transposable element) 106564238 106566478 341349 343600 NC_000014.9 velvet.61345 99.64 True fake: not a misassembly (possible transposable element) 106566454 106567337 344494 343611 NC_000014.9 velvet.61345 99.77 True inversion, scaffold gap is present 106570070 106571180 344505 345623 NC_000014.9 velvet.61345 100.0 True relocation, scaffold gap is present, inconsistency = 36907633 69657455 69659502 350605 348558 NC_000014.9 velvet.61345 99.95 True fake: scaffold gap size wrong estimation (local) 69655062 69655756 352227 351533 NC_000014.9 velvet.61345 100.0 True local misassembly 69656051 69657161 353757 352659 NC_000014.9 velvet.61345 98.83 True fake: scaffold gap size wrong estimation (local) 69652461 69654772 357372 355009 NC_000014.9 velvet.61345 99.83 True fake: scaffold gap size wrong estimation (local) 69630679 69632634 374946 372991 NC_000014.9 velvet.61345 100.0 True relocation, scaffold gap is present, inconsistency = 36490102 106122747 106123558 374957 375768 NC_000014.9 velvet.61345 99.75 True relocation, scaffold gap is present, inconsistency = 466207 106590959 106591888 377934 376962 NC_000014.9 velvet.61345 99.46 True fake: scaffold gap size wrong estimation (local) 106589256 106590382 380421 379334 NC_000014.9 velvet.61345 96.33 True relocation, scaffold gap is present, inconsistency = 293932 106293921 106295281 380464 381824 NC_000014.9 velvet.61345 99.85 True relocation, scaffold gap is present, inconsistency = 471894 106768581 106769688 383230 384337 NC_000014.9 velvet.61345 99.91 True fake: scaffold gap size wrong estimation (local) 106769695 106770359 386892 387556 NC_000014.9 velvet.61345 100.0 True relocation, scaffold gap is present, inconsistency = -549050 106221326 106222761 387573 389007 NC_000014.9 velvet.61345 99.65 True relocation, scaffold gap is present, inconsistency = 76394 106299405 106300338 389257 390190 NC_000014.9 velvet.61345 100.0 True local misassembly 106300677 106301697 390191 391211 NC_000014.9 velvet.61345 99.41 True relocation, scaffold gap is present, inconsistency = 468970 106770678 106772701 391222 393245 NC_000014.9 velvet.61345 99.95 True relocation, scaffold gap is present, inconsistency = 37121570 69646020 69646665 396333 395688 NC_000014.9 velvet.61345 99.85 True fake: scaffold gap size wrong estimation (local) 69644643 69645736 397768 396675 NC_000014.9 velvet.61345 100.0 True fake: scaffold gap size wrong estimation (local) 69642595 69644365 400539 398769 NC_000014.9 velvet.61345 100.0 True fake: scaffold gap size wrong estimation (local) 69641858 69642378 401229 400709 NC_000014.9 velvet.61345 100.0 True relocation, scaffold gap is present, inconsistency = 36379026 33259117 33262821 401240 405008 NC_000014.9 velvet.61345 99.86 True relocation, scaffold gap is present, inconsistency = 43202750 76467530 76469130 406967 408567 NC_000014.9 velvet.61345 99.94 True local misassembly 76463743 76466775 408578 411697 NC_000014.9 velvet.61345 97.15 True inversion, scaffold gap is present 76469344 76469913 413375 412806 NC_000014.9 velvet.61345 100.0 True fake: scaffold gap size wrong estimation (local) 76461783 76463429 415032 413386 NC_000014.9 velvet.61345 100.0 True relocation, scaffold gap is present, inconsistency = 6834289 69626963 69627483 415563 415043 NC_000014.9 velvet.61345 100.0 True fake: scaffold gap size wrong estimation (local) 69624719 69626845 417967 415841 NC_000014.9 velvet.61345 99.48 True local misassembly 69622806 69624271 419433 417968 NC_000014.9 velvet.61345 100.0 True relocation, scaffold gap is present, inconsistency = -7862 69628971 69630657 421130 419444 NC_000014.9 velvet.61345 100.0 True fake: scaffold gap size wrong estimation (local) 69628195 69628707 422492 421980 NC_000014.9 velvet.61345 100.0 True fake: scaffold gap size wrong estimation (local) 69619650 69622177 425217 422690 NC_000014.9 velvet.61345 100.0 True fake: scaffold gap size wrong estimation (local) 69614335 69619322 431361 426374 NC_000014.9 velvet.61345 99.94 True relocation, scaffold gap is present, inconsistency = 36332947 33278535 33281377 431372 434209 NC_000014.9 velvet.61345 99.65 True relocation, scaffold gap is present, inconsistency = 36321897 69603285 69603927 434862 434220 NC_000014.9 velvet.61345 98.29 True local misassembly 69602456 69603029 435436 434863 NC_000014.9 velvet.61345 99.83 True relocation, scaffold gap is present, inconsistency = 36299522 33298245 33302923 435447 440129 NC_000014.9 velvet.61345 99.7 True relocation, scaffold gap is present, inconsistency = 43184973 76487907 76489471 440140 441704 NC_000014.9 velvet.61345 100.0 True relocation, scaffold gap is present, inconsistency = 55502 76429744 76431096 444365 443013 NC_000014.9 velvet.61345 100.0 True fake: scaffold gap size wrong estimation (local) 76428270 76429465 446127 444932 NC_000014.9 velvet.61345 99.92 True relocation, scaffold gap is present, inconsistency = -9437 76435829 76437125 448005 446709 NC_000014.9 velvet.61345 99.92 True fake: scaffold gap size wrong estimation (local) 76434984 76435547 449458 448895 NC_000014.9 velvet.61345 100.0 True relocation, scaffold gap is present, inconsistency = -7882 76441584 76442191 450740 450133 NC_000014.9 velvet.61345 100.0 True relocation, scaffold gap is present, inconsistency = 43197079 33235898 33244494 459348 450751 NC_000014.9 velvet.61345 99.95 True fake: scaffold gap size wrong estimation (local) 33223215 33235798 472142 459560 NC_000014.9 velvet.61345 99.9 True fake: scaffold gap size wrong estimation (local) 33211526 33223055 484646 473127 NC_000014.9 velvet.61345 99.7 True fake: scaffold gap size wrong estimation (local) 33204085 33211355 492429 485103 NC_000014.9 velvet.61345 99.9 True fake: scaffold gap size wrong estimation (local) 33202372 33203429 494608 493542 NC_000014.9 velvet.61345 99.62 True fake: scaffold gap size wrong estimation (local) 33198622 33202162 498874 495272 NC_000014.9 velvet.61345 99.91 True fake: scaffold gap size wrong estimation (local) 33195539 33197834 502882 500530 NC_000014.9 velvet.61345 99.96 True fake: scaffold gap size wrong estimation (local) 33183435 33195214 516412 503875 NC_000014.9 velvet.61345 99.4 True fake: scaffold gap size wrong estimation (local) 33180803 33183138 519860 517525 NC_000014.9 velvet.61345 99.87 True fake: scaffold gap size wrong estimation (local) 33178339 33180521 523045 520863 NC_000014.9 velvet.61345 100.0 True relocation, scaffold gap is present, inconsistency = 9013 33165737 33169315 523056 526634 NC_000014.9 velvet.61345 99.92 True fake: scaffold gap size wrong estimation (local) 33169573 33172753 527681 530887 NC_000014.9 velvet.61345 98.91 True inversion, scaffold gap is present 33177330 33178062 531630 530898 NC_000014.9 velvet.61345 100.0 True fake: scaffold gap size wrong estimation (local) 33172740 33177001 536607 532347 NC_000014.9 velvet.61345 99.88 True relocation, scaffold gap is present, inconsistency = 30094873 63271885 63272771 536618 537504 NC_000014.9 velvet.61345 100.0 True fake: scaffold gap size wrong estimation (local) 63278889 63280055 540062 541228 NC_000014.9 velvet.61345 100.0 True relocation, scaffold gap is present, inconsistency = 28304310 34973714 34974568 542093 541239 NC_000014.9 velvet.61345 98.83 True fake: scaffold gap size wrong estimation (local) 34971333 34972440 545029 543922 NC_000014.9 velvet.61345 100.0 True relocation, scaffold gap is present, inconsistency = 28299568 63273034 63275214 546055 548235 NC_000014.9 velvet.61345 99.95 True relocation, scaffold gap is present, inconsistency = 30113462 33150136 33159098 557670 548709 NC_000014.9 velvet.61345 99.96 True fake: scaffold gap size wrong estimation (local) 33147732 33149805 560763 558715 NC_000014.9 velvet.61345 98.69 True relocation, scaffold gap is present, inconsistency = 30129833 63299417 63300335 580542 581460 NC_000014.9 velvet.61345 99.89 True fake: scaffold gap size wrong estimation (local) 63300605 63302746 582048 584198 NC_000014.9 velvet.61345 99.91 True fake: scaffold gap size wrong estimation (local) 63303368 63304101 585787 586498 NC_000014.9 velvet.61345 96.55 True relocation, scaffold gap is present, inconsistency = 30079062 33160643 33165685 650302 645119 NC_000014.9 velvet.61345 99.98 True fake: scaffold gap size wrong estimation (local) 33159817 33160456 651567 650928 NC_000014.9 velvet.61345 100.0 True relocation, scaffold gap is present, inconsistency = 30173528 63335549 63336140 653132 653723 NC_000014.9 velvet.61345 100.0 True relocation, scaffold gap is present, inconsistency = -28316 63307842 63310824 653741 656723 NC_000014.9 velvet.61345 99.9 True fake: scaffold gap size wrong estimation (local) 63310946 63314439 657047 660540 NC_000014.9 velvet.61345 100.0 True fake: scaffold gap size wrong estimation (local) 63315215 63320491 662107 667383 NC_000014.9 velvet.61345 100.0 True fake: scaffold gap size wrong estimation (local) 63320836 63324452 668415 672410 NC_000014.9 velvet.61345 96.0 True fake: scaffold gap size wrong estimation (local) 63325390 63326118 673852 674580 NC_000014.9 velvet.61345 98.63 True relocation, scaffold gap is present, inconsistency = 30205388 33114218 33119991 681203 674591 NC_000014.9 velvet.61345 99.95 True relocation, scaffold gap is present, inconsistency = -15608 33124128 33129815 687173 681214 NC_000014.9 velvet.61345 99.93 True fake: scaffold gap size wrong estimation (local) 33087181 33088127 720062 719116 NC_000014.9 velvet.61345 99.89 True relocation, scaffold gap is present, inconsistency = 31468527 64557136 64557758 720544 721166 NC_000014.9 velvet.61345 99.84 True relocation, scaffold gap is present, inconsistency = -28015188 36543940 36544794 722536 723390 NC_000014.9 velvet.61345 99.53 True fake: scaffold gap size wrong estimation (local) 36545078 36545925 723787 724630 NC_000014.9 velvet.61345 99.41 True relocation, scaffold gap is present, inconsistency = 46631 36608986 36610206 742280 741060 NC_000014.9 velvet.61345 99.92 True relocation, scaffold gap is present, inconsistency = -9522 36616783 36618497 744005 742291 NC_000014.9 velvet.61345 99.88 True fake: scaffold gap size wrong estimation (local) 36615533 36616543 745551 744541 NC_000014.9 velvet.61345 99.9 True fake: not a misassembly (possible transposable element) 36568348 36569708 745562 746922 NC_000014.9 velvet.61345 99.85 True fake: not a misassembly (possible transposable element) 36614411 36615102 747591 746933 NC_000014.9 velvet.61345 95.01 True relocation, scaffold gap is present, inconsistency = 40492 36570705 36572276 749234 750805 NC_000014.9 velvet.61345 99.75 True fake: not a misassembly (possible transposable element) 36604286 36605563 750834 752111 NC_000014.9 velvet.61345 99.92 True fake: not a misassembly (possible transposable element) 36572885 36574827 752122 754064 NC_000014.9 velvet.61345 99.49 True fake: not a misassembly (possible transposable element) 36612490 36614389 756022 754088 NC_000014.9 velvet.61345 98.09 True fake: not a misassembly (possible transposable element) 36574879 36577403 756033 758557 NC_000014.9 velvet.61345 99.84 True fake: scaffold gap size wrong estimation (local) 36605587 36608188 784094 786666 NC_000014.9 velvet.61345 98.88 True relocation, scaffold gap is present, inconsistency = -1885496 34722703 34723727 786677 787678 NC_000014.9 velvet.61345 97.73 True fake: scaffold gap size wrong estimation (local) 34724642 34725172 790047 790577 NC_000014.9 velvet.61345 99.62 True fake: scaffold gap size wrong estimation (local) 34725961 34726733 790832 791604 NC_000014.9 velvet.61345 98.71 True relocation, scaffold gap is present, inconsistency = -8302 34718782 34719398 791955 792573 NC_000014.9 velvet.61345 99.19 True fake: scaffold gap size wrong estimation (local) 34750111 34751095 822388 823370 NC_000014.9 velvet.61345 99.7 True fake: scaffold gap size wrong estimation (local) 34751733 34753900 824745 826942 NC_000014.9 velvet.61345 98.59 True relocation, scaffold gap is present, inconsistency = -7856 34748578 34749617 829476 830515 NC_000014.9 velvet.61345 98.94 True relocation, scaffold gap is present, inconsistency = 1833032 36582919 36589197 837063 830785 NC_000014.9 velvet.61345 99.94 True fake: scaffold gap size wrong estimation (local) 36577394 36581222 843308 839480 NC_000014.9 velvet.61345 100.0 True relocation, scaffold gap is present, inconsistency = 167536 36408193 36409847 843319 845016 NC_000014.9 velvet.61345 99.75 True fake: not a misassembly (possible transposable element) 36464651 36467790 867518 864380 NC_000014.9 velvet.61345 99.97 True fake: not a misassembly (possible transposable element) 36436592 36440266 867529 871203 NC_000014.9 velvet.61345 99.92 True fake: scaffold gap size wrong estimation (local) 36440534 36444713 872224 876403 NC_000014.9 velvet.61345 99.86 True fake: scaffold gap size wrong estimation (local) 36444977 36448353 877411 880787 NC_000014.9 velvet.61345 99.73 True fake: scaffold gap size wrong estimation (local) 36448653 36451047 881983 884336 NC_000014.9 velvet.61345 97.77 True fake: scaffold gap size wrong estimation (local) 36451225 36462496 885372 896726 NC_000014.9 velvet.61345 99.96 True relocation, scaffold gap is present, inconsistency = 14899 36435125 36436315 897927 896737 NC_000014.9 velvet.61345 99.92 True relocation, scaffold gap is present, inconsistency = 24236756 60673086 60674191 897942 899035 NC_000014.9 velvet.61345 97.92 True fake: scaffold gap size wrong estimation (local) 60675088 60675642 901146 901700 NC_000014.9 velvet.61345 98.02 True fake: scaffold gap size wrong estimation (local) 60677587 60680439 904340 907229 NC_000014.9 velvet.61345 99.96 True fake: scaffold gap size wrong estimation (local) 60680608 60681138 908650 909180 NC_000014.9 velvet.61345 100.0 True fake: scaffold gap size wrong estimation (local) 60681268 60681941 909245 909918 NC_000014.9 velvet.61345 99.7 True fake: scaffold gap size wrong estimation (local) 60697358 60698850 919968 921396 NC_000014.9 velvet.61345 95.62 True fake: scaffold gap size wrong estimation (local) 60705838 60711532 933312 939334 NC_000014.9 velvet.61345 99.61 True relocation, scaffold gap is present, inconsistency = 24155619 36545918 36550012 943630 939541 NC_000014.9 velvet.61345 99.76 True relocation, scaffold gap is present, inconsistency = 71587 36470739 36474320 943641 947381 NC_000014.9 velvet.61345 99.94 True fake: scaffold gap size wrong estimation (local) 36476535 36479322 947399 950226 NC_000014.9 velvet.61345 98.54 True local misassembly 36474541 36476210 950237 951906 NC_000014.9 velvet.61345 99.64 True fake: scaffold gap size wrong estimation (local) 36479393 36484478 951917 957002 NC_000014.9 velvet.61345 99.94 True fake: scaffold gap size wrong estimation (local) 36484687 36487179 957973 960465 NC_000014.9 velvet.61345 99.96 True fake: scaffold gap size wrong estimation (local) 36487848 36490466 961994 964598 NC_000014.9 velvet.61345 99.39 True fake: scaffold gap size wrong estimation (local) 36490784 36507506 965685 983178 NC_000014.9 velvet.61345 99.98 True fake: not a misassembly (possible transposable element) 36508427 36513588 988154 983189 NC_000014.9 velvet.61345 96.13 True fake: not a misassembly (possible transposable element) 36513624 36517067 988165 991736 NC_000014.9 velvet.61345 99.68 True fake: scaffold gap size wrong estimation (local) 36528608 36532155 1005439 1008986 NC_000014.9 velvet.61345 99.86 True local misassembly 36534797 36535383 1008987 1009573 NC_000014.9 velvet.61345 98.3 True fake: scaffold gap size wrong estimation (local) 36535563 36537034 1009833 1011304 NC_000014.9 velvet.61345 99.86 True fake: scaffold gap size wrong estimation (local) 36537375 36543564 1012386 1018613 NC_000014.9 velvet.61345 99.51 True CONTIG velvet.61345 1019616 misassembled 40288692 40289699 1 1008 NC_000014.9 velvet.61348 100.0 True fake: scaffold gap size wrong estimation (local) 40292200 40306807 4180 19587 NC_000014.9 velvet.61348 99.77 True fake: scaffold gap size wrong estimation (local) 40332240 40337771 44425 50169 NC_000014.9 velvet.61348 96.03 True fake: scaffold gap size wrong estimation (local) 40337962 40345917 50990 59685 NC_000014.9 velvet.61348 99.72 True fake: scaffold gap size wrong estimation (local) 40360767 40372222 70178 82348 NC_000014.9 velvet.61348 99.87 True relocation, scaffold gap is present, inconsistency = -26088 40346207 40348087 82421 84301 NC_000014.9 velvet.61348 99.89 True fake: scaffold gap size wrong estimation (local) 40381785 40382529 112735 113479 NC_000014.9 velvet.61348 100.0 True fake: scaffold gap size wrong estimation (local) 40408567 40409285 135757 136475 NC_000014.9 velvet.61348 99.86 True fake: scaffold gap size wrong estimation (local) 40409670 40413473 136951 141326 NC_000014.9 velvet.61348 99.79 True fake: scaffold gap size wrong estimation (local) 40413712 40422414 142388 151086 NC_000014.9 velvet.61348 99.53 True fake: scaffold gap size wrong estimation (local) 40424462 40425314 153732 154584 NC_000014.9 velvet.61348 99.65 True relocation, scaffold gap is present, inconsistency = -53147 40372243 40377039 154660 160193 NC_000014.9 velvet.61348 99.75 True fake: scaffold gap size wrong estimation (local) 40382805 40387994 167021 172902 NC_000014.9 velvet.61348 99.81 True fake: scaffold gap size wrong estimation (local) 40388285 40399425 173525 186566 NC_000014.9 velvet.61348 99.65 True fake: scaffold gap size wrong estimation (local) 40406471 40408346 188172 190051 NC_000014.9 velvet.61348 99.47 True relocation, scaffold gap is present, inconsistency = -8814 40399543 40406231 190062 197213 NC_000014.9 velvet.61348 97.4 True fake: scaffold gap size wrong estimation (local) 40425379 40450087 211455 237223 NC_000014.9 velvet.61348 99.85 True fake: scaffold gap size wrong estimation (local) 40450384 40451266 238115 238998 NC_000014.9 velvet.61348 99.66 True fake: scaffold gap size wrong estimation (local) 40455722 40456500 239009 239787 NC_000014.9 velvet.61348 99.87 True local misassembly 40451518 40454245 239798 242628 NC_000014.9 velvet.61348 99.96 True fake: scaffold gap size wrong estimation (local) 40454355 40455451 243341 244437 NC_000014.9 velvet.61348 99.73 True fake: scaffold gap size wrong estimation (local) 40456743 40458541 249597 251365 NC_000014.9 velvet.61348 97.76 True fake: scaffold gap size wrong estimation (local) 40458891 40465018 252477 258604 NC_000014.9 velvet.61348 99.92 True fake: scaffold gap size wrong estimation (local) 40467195 40474800 264294 272886 NC_000014.9 velvet.61348 99.8 True fake: scaffold gap size wrong estimation (local) 40475004 40487280 273796 286881 NC_000014.9 velvet.61348 99.91 True fake: scaffold gap size wrong estimation (local) 40487443 40492177 287840 292574 NC_000014.9 velvet.61348 99.89 True relocation, scaffold gap is present, inconsistency = 140554 40632742 40634507 294350 292585 NC_000014.9 velvet.61348 99.72 True fake: scaffold gap size wrong estimation (local) 40630175 40631291 297640 296524 NC_000014.9 velvet.61348 99.82 True fake: scaffold gap size wrong estimation (local) 40627265 40629527 301475 299213 NC_000014.9 velvet.61348 100.0 True fake: scaffold gap size wrong estimation (local) 40622826 40626981 306935 302367 NC_000014.9 velvet.61348 98.53 True fake: scaffold gap size wrong estimation (local) 40620228 40622657 310333 307770 NC_000014.9 velvet.61348 99.87 True fake: scaffold gap size wrong estimation (local) 40611911 40619954 320167 311287 NC_000014.9 velvet.61348 99.87 True fake: scaffold gap size wrong estimation (local) 40590800 40591774 337792 336818 NC_000014.9 velvet.61348 99.9 True relocation, scaffold gap is present, inconsistency = 62693 40520552 40527314 338585 346449 NC_000014.9 velvet.61348 99.7 True inversion, scaffold gap is present 40518094 40519299 349389 348184 NC_000014.9 velvet.61348 99.92 True relocation, scaffold gap is present, inconsistency = 8658 40527968 40531504 349400 353079 NC_000014.9 velvet.61348 99.25 True relocation, scaffold gap is present, inconsistency = 52811 40584326 40590687 361217 353090 NC_000014.9 velvet.61348 99.74 True relocation, scaffold gap is present, inconsistency = 49418 40532915 40534882 361243 363131 NC_000014.9 velvet.61348 95.81 True CONTIG velvet.61348 363318 misassembled CONTIG velvet.61353 236 unaligned 56478932 56479689 206 963 NC_000014.9 velvet.61356 100.0 True fake: scaffold gap size wrong estimation (extensive) 56489636 56492003 974 3341 NC_000014.9 velvet.61356 99.83 True indel: indel (<= 5bp) 56492009 56493334 3342 4667 NC_000014.9 velvet.61356 98.34 True fake: scaffold gap size wrong estimation (local) 56493335 56494101 7722 8488 NC_000014.9 velvet.61356 98.57 True fake: scaffold gap size wrong estimation (local) 56494102 56498807 9390 14095 NC_000014.9 velvet.61356 99.36 True fake: scaffold gap size wrong estimation (local) 56500127 56503873 16414 20169 NC_000014.9 velvet.61356 99.95 True fake: scaffold gap size wrong estimation (local) 56504266 56505632 21069 22435 NC_000014.9 velvet.61356 100.0 True relocation, scaffold gap is present, inconsistency = -10371 56505806 56507443 32980 34617 NC_000014.9 velvet.61356 100.0 True fake: scaffold gap size wrong estimation (local) 56507690 56511302 35445 39048 NC_000014.9 velvet.61356 99.7 True fake: scaffold gap size wrong estimation (local) 56511575 56513050 40045 41520 NC_000014.9 velvet.61356 100.0 True fake: scaffold gap size wrong estimation (local) 56513147 56522541 41744 52068 NC_000014.9 velvet.61356 99.16 True fake: scaffold gap size wrong estimation (local) 56540469 56542630 67765 69925 NC_000014.9 velvet.61356 99.91 True fake: scaffold gap size wrong estimation (local) 56542762 56546087 70834 74205 NC_000014.9 velvet.61356 99.97 True fake: scaffold gap size wrong estimation (local) 56546350 56546925 75003 75578 NC_000014.9 velvet.61356 100.0 True CONTIG velvet.61356 76316 misassembled 45589022 45589909 1 888 NC_000014.9 velvet.61366 100.0 True CONTIG velvet.61366 888 correct 73581457 73582212 26474 27228 NC_000014.9 velvet.61372 99.87 True fake: scaffold gap size wrong estimation (local) 73588301 73589174 34020 34893 NC_000014.9 velvet.61372 99.89 True fake: scaffold gap size wrong estimation (local) 73593620 73594701 40752 41825 NC_000014.9 velvet.61372 99.26 True fake: scaffold gap size wrong estimation (local) 73595003 73596621 42813 44431 NC_000014.9 velvet.61372 99.94 True local misassembly 73591574 73592611 44646 45683 NC_000014.9 velvet.61372 99.9 True fake: scaffold gap size wrong estimation (local) 73627095 73627832 74318 75056 NC_000014.9 velvet.61372 99.73 True fake: scaffold gap size wrong estimation (local) 73633299 73635161 76522 78384 NC_000014.9 velvet.61372 99.89 True CONTIG velvet.61372 78384 correct 98180677 98189901 1 9196 NC_000014.9 velvet.61375 99.59 True relocation, scaffold gap is present, inconsistency = 17516 98214342 98215960 17739 16121 NC_000014.9 velvet.61375 98.02 True fake: scaffold gap size wrong estimation (local) 98211116 98214341 21730 18505 NC_000014.9 velvet.61375 99.54 True local misassembly 98198058 98207871 31544 21731 NC_000014.9 velvet.61375 99.95 True relocation, scaffold gap is present, inconsistency = 8129 98216011 98223657 31555 39960 NC_000014.9 velvet.61375 99.79 True fake: scaffold gap size wrong estimation (local) 98223898 98229187 40958 46554 NC_000014.9 velvet.61375 99.83 True fake: scaffold gap size wrong estimation (local) 98255665 98257649 68984 70957 NC_000014.9 velvet.61375 99.39 True relocation, scaffold gap is present, inconsistency = -16754 98242375 98245526 72437 75588 NC_000014.9 velvet.61375 99.75 True local misassembly 98245527 98246850 78017 79340 NC_000014.9 velvet.61375 99.09 True indel: indel (> 5bp) 98246904 98247505 79374 79975 NC_000014.9 velvet.61375 98.17 True relocation, scaffold gap is present, inconsistency = -9487142 88760374 88761249 79986 80861 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (extensive) 88772784 88773824 82704 83744 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 88774029 88776207 84502 86678 NC_000014.9 velvet.61375 99.82 True fake: scaffold gap size wrong estimation (local) 88776886 88777721 87963 88798 NC_000014.9 velvet.61375 99.88 True fake: scaffold gap size wrong estimation (local) 88777922 88778560 89404 90042 NC_000014.9 velvet.61375 100.0 True local misassembly 88778792 88779964 90043 91215 NC_000014.9 velvet.61375 99.15 True relocation, scaffold gap is present, inconsistency = -15096 88766887 88768427 93234 94757 NC_000014.9 velvet.61375 98.82 True fake: scaffold gap size wrong estimation (local) 88768704 88772533 95774 99602 NC_000014.9 velvet.61375 99.84 True fake: scaffold gap size wrong estimation (local) 88803972 88805959 129357 131344 NC_000014.9 velvet.61375 99.85 True fake: scaffold gap size wrong estimation (local) 88806219 88807027 132684 133492 NC_000014.9 velvet.61375 99.88 True relocation, scaffold gap is present, inconsistency = -13230 88793808 88795273 133503 134968 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 88798154 88798662 138168 138676 NC_000014.9 velvet.61375 98.04 True relocation, scaffold gap is present, inconsistency = 6503658 82290198 82291087 142974 142085 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 82289017 82289956 144740 143801 NC_000014.9 velvet.61375 99.79 True fake: scaffold gap size wrong estimation (local) 82286315 82288764 148760 144913 NC_000014.9 velvet.61375 95.72 True relocation, scaffold gap is present, inconsistency = 6513022 88801797 88803722 148771 150696 NC_000014.9 velvet.61375 99.84 True fake: scaffold gap size wrong estimation (local) 88807166 88811402 150707 154943 NC_000014.9 velvet.61375 99.95 True relocation, scaffold gap is present, inconsistency = 9536746 98348453 98349785 156580 155248 NC_000014.9 velvet.61375 99.77 True fake: not a misassembly (possible transposable element) 98293304 98295818 156591 159105 NC_000014.9 velvet.61375 99.96 True fake: not a misassembly (possible transposable element) 98342970 98343680 160284 159574 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 98340989 98342745 162348 160592 NC_000014.9 velvet.61375 99.89 True fake: scaffold gap size wrong estimation (local) 98336286 98338160 164234 162359 NC_000014.9 velvet.61375 99.68 True relocation, scaffold gap is present, inconsistency = 193987 98137866 98142092 168667 164441 NC_000014.9 velvet.61375 100.0 True relocation, scaffold gap is present, inconsistency = 144407 98286510 98289407 168678 171574 NC_000014.9 velvet.61375 99.83 True fake: scaffold gap size wrong estimation (extensive) 98297090 98305354 171588 179893 NC_000014.9 velvet.61375 99.41 True fake: scaffold gap size wrong estimation (local) 98306111 98307028 181392 182309 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 98307322 98308226 182496 183400 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 98308547 98311244 184647 187344 NC_000014.9 velvet.61375 100.0 True relocation, scaffold gap is present, inconsistency = 4728516 103040720 103042296 189880 188304 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 103038778 103040070 192841 191549 NC_000014.9 velvet.61375 98.99 True fake: scaffold gap size wrong estimation (local) 103033491 103034530 199955 198916 NC_000014.9 velvet.61375 100.0 True relocation, scaffold gap is present, inconsistency = 4954438 98064276 98078800 200208 214708 NC_000014.9 velvet.61375 99.83 True relocation, scaffold gap is present, inconsistency = 29588 98112264 98115180 221547 218584 NC_000014.9 velvet.61375 100.0 True relocation, scaffold gap is present, inconsistency = 9250155 88855860 88857978 225678 227796 NC_000014.9 velvet.61375 99.95 True fake: scaffold gap size wrong estimation (local) 88893967 88894736 257753 258522 NC_000014.9 velvet.61375 99.35 True local misassembly 88894778 88896781 258791 260794 NC_000014.9 velvet.61375 100.0 True inversion, scaffold gap is present 88903511 88905996 263535 261050 NC_000014.9 velvet.61375 99.96 True fake: scaffold gap size wrong estimation (local) 88901827 88903233 265916 264510 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 88900669 88901677 267288 266280 NC_000014.9 velvet.61375 100.0 True fake: not a misassembly (possible transposable element) 91337598 91342132 271863 267299 NC_000014.9 velvet.61375 99.28 True fake: not a misassembly (possible transposable element) 88889252 88893852 276438 271874 NC_000014.9 velvet.61375 99.15 True indel: indel (> 5bp) 88885032 88889229 280778 276511 NC_000014.9 velvet.61375 98.31 True fake: scaffold gap size wrong estimation (local) 88883384 88884364 283174 282205 NC_000014.9 velvet.61375 98.78 True relocation, scaffold gap is present, inconsistency = 2401714 91287668 91288680 284764 285776 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 91288891 91290016 285989 287114 NC_000014.9 velvet.61375 99.91 True fake: scaffold gap size wrong estimation (local) 91290302 91293079 288220 290997 NC_000014.9 velvet.61375 99.93 True fake: scaffold gap size wrong estimation (local) 91294959 91297638 291008 293687 NC_000014.9 velvet.61375 99.93 True local misassembly 91293606 91294690 293698 294782 NC_000014.9 velvet.61375 100.0 True relocation, scaffold gap is present, inconsistency = 15980 91310681 91312106 296218 294793 NC_000014.9 velvet.61375 99.93 True relocation, scaffold gap is present, inconsistency = -13195 91316652 91318686 303442 301408 NC_000014.9 velvet.61375 99.95 True fake: scaffold gap size wrong estimation (local) 91312614 91316407 308302 304510 NC_000014.9 velvet.61375 99.89 True fake: scaffold gap size wrong estimation (local) 91305187 91308943 312776 309020 NC_000014.9 velvet.61375 99.95 True fake: scaffold gap size wrong estimation (local) 91301602 91304379 317332 314518 NC_000014.9 velvet.61375 99.89 True fake: scaffold gap size wrong estimation (local) 91298530 91301437 321155 318248 NC_000014.9 velvet.61375 99.93 True fake: not a misassembly (possible transposable element) 91309641 91310594 321649 322626 NC_000014.9 velvet.61375 96.64 True fake: not a misassembly (possible transposable element) 91276093 91278884 341013 338201 NC_000014.9 velvet.61375 98.58 True fake: scaffold gap size wrong estimation (local) 91271157 91275477 346816 342418 NC_000014.9 velvet.61375 99.91 True relocation, scaffold gap is present, inconsistency = -8914940 100184967 100185729 347945 347184 NC_000014.9 velvet.61375 99.48 True inversion, scaffold gap is present 100187324 100187935 349419 350030 NC_000014.9 velvet.61375 98.2 True local misassembly 100188263 100189042 350031 350810 NC_000014.9 velvet.61375 98.59 True fake: scaffold gap size wrong estimation (local) 100190129 100190680 352808 353359 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 100192262 100195127 355659 359420 NC_000014.9 velvet.61375 99.93 True fake: scaffold gap size wrong estimation (local) 100199257 100199904 365840 366487 NC_000014.9 velvet.61375 100.0 True relocation, scaffold gap is present, inconsistency = 67866403 32321853 32325716 377566 373625 NC_000014.9 velvet.61375 97.82 True fake: scaffold gap size wrong estimation (local) 32320249 32321601 379892 378540 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 32319461 32319985 380595 380071 NC_000014.9 velvet.61375 99.81 True fake: scaffold gap size wrong estimation (local) 32316710 32319170 384191 381731 NC_000014.9 velvet.61375 99.96 True fake: scaffold gap size wrong estimation (local) 32310562 32316166 390721 385133 NC_000014.9 velvet.61375 98.85 True fake: scaffold gap size wrong estimation (local) 32303030 32310315 399088 391756 NC_000014.9 velvet.61375 99.79 True fake: scaffold gap size wrong estimation (local) 32297547 32302665 405384 400201 NC_000014.9 velvet.61375 99.9 True fake: scaffold gap size wrong estimation (local) 32295363 32296996 408265 406633 NC_000014.9 velvet.61375 99.82 True fake: scaffold gap size wrong estimation (local) 32292855 32295087 411605 409373 NC_000014.9 velvet.61375 100.0 True relocation, scaffold gap is present, inconsistency = 2002122 34297220 34299205 411616 413571 NC_000014.9 velvet.61375 98.33 True relocation, scaffold gap is present, inconsistency = 48586613 82886217 82887963 413970 415716 NC_000014.9 velvet.61375 99.94 True relocation, scaffold gap is present, inconsistency = 17311212 100202799 100203777 419340 420318 NC_000014.9 velvet.61375 100.0 True relocation, scaffold gap is present, inconsistency = 35008297 65193096 65194174 421714 420646 NC_000014.9 velvet.61375 98.33 True relocation, scaffold gap is present, inconsistency = 116459 65071401 65075942 426950 422409 NC_000014.9 velvet.61375 99.87 True fake: scaffold gap size wrong estimation (local) 65068389 65071194 430746 427941 NC_000014.9 velvet.61375 99.96 True fake: not a misassembly (possible transposable element) 100206088 100207230 430950 432086 NC_000014.9 velvet.61375 99.3 True fake: not a misassembly (possible transposable element) 65067021 65067609 433134 432505 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 65043840 65045440 455244 453644 NC_000014.9 velvet.61375 99.81 True fake: scaffold gap size wrong estimation (local) 65040608 65043536 459220 456292 NC_000014.9 velvet.61375 99.86 True relocation, scaffold gap is present, inconsistency = 12310211 77353758 77354699 459231 460172 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 77379694 77381967 489536 491809 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 77383002 77383725 493731 494454 NC_000014.9 velvet.61375 100.0 True local misassembly 77384004 77384928 494455 495379 NC_000014.9 velvet.61375 98.81 True fake: scaffold gap size wrong estimation (local) 77392088 77392643 497044 497599 NC_000014.9 velvet.61375 100.0 True local misassembly 77386626 77387361 497999 498734 NC_000014.9 velvet.61375 98.64 True indel: indel (> 5bp) 77387401 77388407 498735 499741 NC_000014.9 velvet.61375 98.71 True fake: scaffold gap size wrong estimation (local) 77393474 77395120 506356 508002 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 77396543 77397630 510316 511403 NC_000014.9 velvet.61375 99.08 True local misassembly 77397891 77398718 511404 512231 NC_000014.9 velvet.61375 98.67 True fake: scaffold gap size wrong estimation (local) 77398988 77401136 513574 515722 NC_000014.9 velvet.61375 99.81 True local misassembly 77401485 77402374 515810 516699 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 77428575 77430463 540019 541907 NC_000014.9 velvet.61375 99.95 True fake: scaffold gap size wrong estimation (local) 77430757 77431652 542472 543367 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 77431653 77432494 544078 544919 NC_000014.9 velvet.61375 98.46 True indel: indel (> 5bp) 77432521 77433253 544920 545652 NC_000014.9 velvet.61375 98.64 True local misassembly 77433492 77434659 545653 546820 NC_000014.9 velvet.61375 99.14 True fake: scaffold gap size wrong estimation (local) 77434902 77436503 547869 549477 NC_000014.9 velvet.61375 99.87 True fake: scaffold gap size wrong estimation (local) 77436724 77438245 550177 551698 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 77438533 77439687 552322 553476 NC_000014.9 velvet.61375 99.91 True indel: indel (> 5bp) 77439688 77440205 553483 554000 NC_000014.9 velvet.61375 99.03 True indel: indel (<= 5bp) 77440209 77440763 554001 554555 NC_000014.9 velvet.61375 99.64 True fake: scaffold gap size wrong estimation (local) 77441383 77443581 555935 558133 NC_000014.9 velvet.61375 98.95 True fake: scaffold gap size wrong estimation (local) 77443933 77444609 559106 559782 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (extensive) 77461529 77463092 568800 570363 NC_000014.9 velvet.61375 99.81 True fake: scaffold gap size wrong estimation (local) 77466277 77467171 575593 576487 NC_000014.9 velvet.61375 99.89 True local misassembly 77464385 77465843 577569 579027 NC_000014.9 velvet.61375 99.93 True fake: scaffold gap size wrong estimation (local) 77469010 77470047 579038 580075 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 77470266 77470943 580458 581135 NC_000014.9 velvet.61375 99.85 True fake: scaffold gap size wrong estimation (local) 77471803 77473430 582580 584207 NC_000014.9 velvet.61375 99.82 True fake: scaffold gap size wrong estimation (local) 77473493 77476915 585094 588431 NC_000014.9 velvet.61375 96.79 True fake: scaffold gap size wrong estimation (local) 77477040 77479131 589361 591452 NC_000014.9 velvet.61375 99.9 True fake: scaffold gap size wrong estimation (local) 77482148 77482924 596041 596817 NC_000014.9 velvet.61375 98.71 True fake: scaffold gap size wrong estimation (local) 77483580 77484472 599735 600627 NC_000014.9 velvet.61375 99.89 True fake: scaffold gap size wrong estimation (local) 77484516 77486985 600899 603372 NC_000014.9 velvet.61375 99.72 True fake: scaffold gap size wrong estimation (local) 77487291 77489561 604517 606787 NC_000014.9 velvet.61375 99.82 True fake: not a misassembly (possible transposable element) 77495154 77495961 607605 606798 NC_000014.9 velvet.61375 99.88 True fake: not a misassembly (possible transposable element) 77490301 77491461 608379 609555 NC_000014.9 velvet.61375 98.56 True relocation, scaffold gap is present, inconsistency = 54653545 22831239 22832336 615048 613975 NC_000014.9 velvet.61375 97.79 True fake: scaffold gap size wrong estimation (local) 22829424 22831098 617353 615678 NC_000014.9 velvet.61375 99.7 True fake: scaffold gap size wrong estimation (local) 22827938 22828880 620031 619089 NC_000014.9 velvet.61375 99.89 True relocation, scaffold gap is present, inconsistency = 70068045 92897897 92900110 621003 623216 NC_000014.9 velvet.61375 99.91 True relocation, scaffold gap is present, inconsistency = 5895067 98795188 98798992 627031 623227 NC_000014.9 velvet.61375 99.97 True relocation, scaffold gap is present, inconsistency = 17638950 81154248 81156227 629021 627042 NC_000014.9 velvet.61375 99.85 True relocation, scaffold gap is present, inconsistency = 3646759 77505823 77507358 629152 630687 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 77510768 77512814 630698 632744 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 77514034 77515426 634725 636157 NC_000014.9 velvet.61375 99.93 True fake: scaffold gap size wrong estimation (local) 77516019 77517002 637543 638526 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 77517238 77518426 638859 640047 NC_000014.9 velvet.61375 99.92 True relocation, scaffold gap is present, inconsistency = 7301385 84820634 84826842 647232 640870 NC_000014.9 velvet.61375 99.94 True relocation, scaffold gap is present, inconsistency = 7310164 77507611 77510459 650209 647243 NC_000014.9 velvet.61375 95.65 True relocation, scaffold gap is present, inconsistency = 15923597 61583402 61583995 650228 650821 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 61584271 61594625 651378 662522 NC_000014.9 velvet.61375 99.91 True relocation, scaffold gap is present, inconsistency = 9155588 70750696 70751514 663005 663823 NC_000014.9 velvet.61375 99.63 True fake: scaffold gap size wrong estimation (local) 70751723 70754514 664920 667711 NC_000014.9 velvet.61375 99.89 True relocation, scaffold gap is present, inconsistency = 47947928 22800875 22801490 670631 670016 NC_000014.9 velvet.61375 98.21 True local misassembly 22799717 22800632 671547 670632 NC_000014.9 velvet.61375 99.89 True relocation, scaffold gap is present, inconsistency = -61995718 84794041 84795424 672984 671558 NC_000014.9 velvet.61375 99.93 True relocation, scaffold gap is present, inconsistency = 23175675 61613145 61618216 673134 678398 NC_000014.9 velvet.61375 99.84 True fake: scaffold gap size wrong estimation (local) 61620636 61621233 678409 679006 NC_000014.9 velvet.61375 100.0 True fake: not a misassembly (possible transposable element) 84789033 84790067 680051 679017 NC_000014.9 velvet.61375 99.9 True fake: not a misassembly (possible transposable element) 61618327 61620607 680062 682342 NC_000014.9 velvet.61375 99.82 True fake: not a misassembly (possible transposable element) 84790361 84792715 684707 682353 NC_000014.9 velvet.61375 99.87 True fake: not a misassembly (possible transposable element) 61621237 61623166 684708 686637 NC_000014.9 velvet.61375 99.9 True relocation, scaffold gap is present, inconsistency = 23162907 84787068 84787971 688534 687632 NC_000014.9 velvet.61375 99.89 True fake: scaffold gap size wrong estimation (local) 84774047 84783183 697741 688545 NC_000014.9 velvet.61375 99.85 True fake: scaffold gap size wrong estimation (local) 84773055 84773849 699130 698336 NC_000014.9 velvet.61375 99.87 True fake: scaffold gap size wrong estimation (local) 84770043 84772482 702778 700329 NC_000014.9 velvet.61375 99.51 True relocation, scaffold gap is present, inconsistency = -15569 84783215 84785601 705175 702789 NC_000014.9 velvet.61375 99.83 True fake: scaffold gap size wrong estimation (local) 84753920 84754723 729274 728475 NC_000014.9 velvet.61375 98.01 True fake: scaffold gap size wrong estimation (local) 84749150 84753816 734892 729404 NC_000014.9 velvet.61375 98.96 True fake: scaffold gap size wrong estimation (local) 84746285 84749061 738487 735709 NC_000014.9 velvet.61375 99.82 True relocation, scaffold gap is present, inconsistency = -40528 84785622 84786802 739675 738498 NC_000014.9 velvet.61375 99.75 True relocation, scaffold gap is present, inconsistency = 23161314 61623506 61624297 739686 740477 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 61624373 61633615 740595 750552 NC_000014.9 velvet.61375 99.97 True fake: scaffold gap size wrong estimation (local) 61633900 61636009 751581 753690 NC_000014.9 velvet.61375 99.95 True fake: scaffold gap size wrong estimation (local) 61636289 61639484 754767 757962 NC_000014.9 velvet.61375 99.94 True fake: scaffold gap size wrong estimation (local) 61639817 61641751 759036 760955 NC_000014.9 velvet.61375 99.11 True fake: scaffold gap size wrong estimation (local) 61641890 61645229 761908 765247 NC_000014.9 velvet.61375 99.88 True fake: scaffold gap size wrong estimation (local) 61645377 61649911 765884 771276 NC_000014.9 velvet.61375 99.89 True fake: scaffold gap size wrong estimation (local) 61650298 61655050 772157 777581 NC_000014.9 velvet.61375 99.73 True relocation, scaffold gap is present, inconsistency = 23100512 84755573 84762999 785577 777592 NC_000014.9 velvet.61375 99.5 True relocation, scaffold gap is present, inconsistency = 23090317 61659301 61661054 789779 791656 NC_000014.9 velvet.61375 99.59 True fake: scaffold gap size wrong estimation (local) 61661328 61663143 792760 794575 NC_000014.9 velvet.61375 99.94 True fake: scaffold gap size wrong estimation (local) 61663429 61665185 795301 797519 NC_000014.9 velvet.61375 99.82 True fake: scaffold gap size wrong estimation (local) 61665470 61666629 797995 799154 NC_000014.9 velvet.61375 99.91 True relocation, scaffold gap is present, inconsistency = 40276671 21378231 21379164 809722 808789 NC_000014.9 velvet.61375 98.93 True fake: scaffold gap size wrong estimation (local) 21375902 21376930 812470 811442 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 21373977 21375015 814956 813918 NC_000014.9 velvet.61375 98.94 True local misassembly 21373216 21373757 815498 814957 NC_000014.9 velvet.61375 100.0 True relocation, scaffold gap is present, inconsistency = 40299620 61674966 61680132 817087 822806 NC_000014.9 velvet.61375 99.76 True fake: scaffold gap size wrong estimation (local) 61680407 61683852 823689 827134 NC_000014.9 velvet.61375 99.85 True fake: scaffold gap size wrong estimation (local) 61685508 61686054 829529 830075 NC_000014.9 velvet.61375 100.0 True relocation, scaffold gap is present, inconsistency = 32842134 94528199 94533001 835482 830086 NC_000014.9 velvet.61375 99.73 True fake: scaffold gap size wrong estimation (local) 94526200 94526703 838423 837921 NC_000014.9 velvet.61375 99.82 True relocation, inconsistency = 9802365 84717928 84723834 845176 838424 NC_000014.9 velvet.61375 99.4 True inversion, scaffold gap is present 84724225 84725263 845187 846225 NC_000014.9 velvet.61375 99.81 True inversion, scaffold gap is present 84727360 84730040 848904 846236 NC_000014.9 velvet.61375 99.44 True relocation, scaffold gap is present, inconsistency = 11351 84713828 84715998 851108 848915 NC_000014.9 velvet.61375 98.36 True fake: scaffold gap size wrong estimation (local) 84712788 84713569 853210 852429 NC_000014.9 velvet.61375 99.74 True relocation, scaffold gap is present, inconsistency = 23024464 61686340 61688313 853221 855194 NC_000014.9 velvet.61375 99.8 True fake: scaffold gap size wrong estimation (local) 61688603 61689680 855914 856991 NC_000014.9 velvet.61375 100.0 True relocation, scaffold gap is present, inconsistency = 32775174 28910010 28912270 860410 858150 NC_000014.9 velvet.61375 100.0 True relocation, scaffold gap is present, inconsistency = -29515 28922840 28937909 877435 862026 NC_000014.9 velvet.61375 99.24 True relocation, scaffold gap is present, inconsistency = -55790347 84708091 84712775 882527 877847 NC_000014.9 velvet.61375 99.7 True relocation, scaffold gap is present, inconsistency = 4193978 80513056 80513770 883584 882870 NC_000014.9 velvet.61375 99.86 True fake: scaffold gap size wrong estimation (local) 80501735 80506322 888182 883595 NC_000014.9 velvet.61375 99.98 True fake: scaffold gap size wrong estimation (local) 80489269 80501488 901382 889167 NC_000014.9 velvet.61375 99.92 True relocation, scaffold gap is present, inconsistency = -4218825 84703080 84708083 906396 901393 NC_000014.9 velvet.61375 99.9 True relocation, scaffold gap is present, inconsistency = 2497695 82194684 82205374 906407 917097 NC_000014.9 velvet.61375 99.94 True fake: not a misassembly (possible transposable element) 80484230 80486168 919558 917620 NC_000014.9 velvet.61375 100.0 True fake: not a misassembly (possible transposable element) 82206176 82208328 919569 921759 NC_000014.9 velvet.61375 99.86 True relocation, scaffold gap is present, inconsistency = 1722057 80481102 80484108 924820 921770 NC_000014.9 velvet.61375 97.42 True fake: scaffold gap size wrong estimation (local) 80480446 80481009 925527 924965 NC_000014.9 velvet.61375 99.47 True fake: scaffold gap size wrong estimation (extensive) 80467949 80470992 928581 925538 NC_000014.9 velvet.61375 99.9 True relocation, scaffold gap is present, inconsistency = 9500131 89971134 89975111 928592 932567 NC_000014.9 velvet.61375 99.85 True relocation, scaffold gap is present, inconsistency = 21898099 68067936 68069503 937666 936099 NC_000014.9 velvet.61375 100.0 True relocation, scaffold gap is present, inconsistency = 21899982 89970180 89970853 938361 939034 NC_000014.9 velvet.61375 100.0 True relocation, scaffold gap is present, inconsistency = 21892490 68072675 68077679 944049 939045 NC_000014.9 velvet.61375 100.0 True relocation, scaffold gap is present, inconsistency = 34116928 33950897 33952101 947695 948899 NC_000014.9 velvet.61375 99.83 True relocation, scaffold gap is present, inconsistency = 46582715 80534827 80539964 954661 948910 NC_000014.9 velvet.61375 99.79 True fake: scaffold gap size wrong estimation (local) 80530267 80534543 959942 955667 NC_000014.9 velvet.61375 99.84 True fake: scaffold gap size wrong estimation (local) 80527432 80528296 963347 962483 NC_000014.9 velvet.61375 99.88 True fake: not a misassembly (possible transposable element) 37082202 37085860 963358 967016 NC_000014.9 velvet.61375 99.92 True fake: not a misassembly (possible transposable element) 80528560 80530242 968709 967027 NC_000014.9 velvet.61375 100.0 True relocation, scaffold gap is present, inconsistency = 46580662 33946321 33947798 968809 970286 NC_000014.9 velvet.61375 99.93 True inversion, scaffold gap is present 33944976 33946091 971412 970297 NC_000014.9 velvet.61375 100.0 True relocation, scaffold gap is present, inconsistency = 3130677 37076779 37082086 971423 976720 NC_000014.9 velvet.61375 99.75 True relocation, scaffold gap is present, inconsistency = -7251 37074846 37076243 976731 978128 NC_000014.9 velvet.61375 99.93 True fake: scaffold gap size wrong estimation (extensive) 37086136 37091267 978139 983263 NC_000014.9 velvet.61375 99.61 True relocation, scaffold gap is present, inconsistency = 43429835 80521113 80526968 989794 983274 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 80518315 80520143 993408 991580 NC_000014.9 velvet.61375 99.95 True fake: scaffold gap size wrong estimation (local) 80510308 80512260 996193 994320 NC_000014.9 velvet.61375 95.91 True relocation, scaffold gap is present, inconsistency = 37169 80471414 80472263 997959 997069 NC_000014.9 velvet.61375 99.76 True relocation, scaffold gap is present, inconsistency = 89016 80361858 80367520 1012837 1018718 NC_000014.9 velvet.61375 99.96 True relocation, scaffold gap is present, inconsistency = -7613 80360171 80361838 1018982 1020649 NC_000014.9 velvet.61375 99.94 True fake: scaffold gap size wrong estimation (extensive) 80369773 80374437 1021320 1026605 NC_000014.9 velvet.61375 99.8 True relocation, scaffold gap is present, inconsistency = 53745 80428193 80439703 1038067 1026616 NC_000014.9 velvet.61375 99.44 True fake: scaffold gap size wrong estimation (local) 80425414 80427978 1041591 1039027 NC_000014.9 velvet.61375 100.0 True fake: not a misassembly (possible transposable element) 80406371 80408355 1044379 1042395 NC_000014.9 velvet.61375 99.75 True fake: not a misassembly (possible transposable element) 80417897 80422948 1051829 1046653 NC_000014.9 velvet.61375 99.96 True relocation, scaffold gap is present, inconsistency = 11381 80397808 80402216 1056129 1061323 NC_000014.9 velvet.61375 99.06 True inversion, scaffold gap is present 80403612 80406353 1064075 1061334 NC_000014.9 velvet.61375 99.93 True fake: scaffold gap size wrong estimation (local) 80402606 80403483 1066086 1065209 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 80394449 80397743 1069776 1066482 NC_000014.9 velvet.61375 99.03 True fake: scaffold gap size wrong estimation (local) 80390276 80394448 1074743 1070571 NC_000014.9 velvet.61375 99.95 True fake: scaffold gap size wrong estimation (extensive) 80353523 80354574 1102237 1101186 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 80349440 80353060 1107048 1103428 NC_000014.9 velvet.61375 99.92 True fake: scaffold gap size wrong estimation (local) 80341325 80349215 1116088 1108020 NC_000014.9 velvet.61375 98.03 True fake: scaffold gap size wrong estimation (local) 80336186 80340711 1121921 1117335 NC_000014.9 velvet.61375 99.89 True fake: scaffold gap size wrong estimation (local) 80322393 80329068 1141080 1134407 NC_000014.9 velvet.61375 99.93 True fake: scaffold gap size wrong estimation (local) 80320392 80322104 1143914 1142202 NC_000014.9 velvet.61375 100.0 True fake: scaffold gap size wrong estimation (local) 80317985 80319055 1147138 1146068 NC_000014.9 velvet.61375 98.88 True local misassembly 80306329 80312475 1153285 1147139 NC_000014.9 velvet.61375 99.93 True CONTIG velvet.61375 1153285 misassembled 73780938 73781489 1 552 NC_000014.9 velvet.61384 100.0 True CONTIG velvet.61384 552 correct CONTIG velvet.61392 3618 unaligned CONTIG velvet.61396 223 unaligned 65075963 65078216 1 2254 NC_000014.9 velvet.61404 99.91 True fake: scaffold gap size wrong estimation (local) 65078827 65086116 3617 11693 NC_000014.9 velvet.61404 99.81 True fake: scaffold gap size wrong estimation (local) 65088172 65089779 14441 16048 NC_000014.9 velvet.61404 99.81 True fake: scaffold gap size wrong estimation (local) 65089780 65090544 16201 16965 NC_000014.9 velvet.61404 96.47 True fake: scaffold gap size wrong estimation (local) 65120845 65121490 46671 47316 NC_000014.9 velvet.61404 100.0 True local misassembly 65121743 65122528 47317 48102 NC_000014.9 velvet.61404 98.73 True fake: scaffold gap size wrong estimation (local) 65123383 65124070 50030 50717 NC_000014.9 velvet.61404 99.85 True inversion, scaffold gap is present 65128091 65129013 56253 55331 NC_000014.9 velvet.61404 99.89 True relocation, scaffold gap is present, inconsistency = 32962217 32163519 32164160 57967 58608 NC_000014.9 velvet.61404 100.0 True relocation, scaffold gap is present, inconsistency = 32966987 65131158 65132268 58619 59729 NC_000014.9 velvet.61404 99.91 True inversion, scaffold gap is present 65126461 65127851 61133 59743 NC_000014.9 velvet.61404 99.14 True local misassembly 65125568 65126235 61801 61134 NC_000014.9 velvet.61404 100.0 True inversion, scaffold gap is present 65132944 65134450 62015 63521 NC_000014.9 velvet.61404 99.27 True fake: not a misassembly (possible transposable element) 65145149 65146376 63532 64759 NC_000014.9 velvet.61404 100.0 True fake: not a misassembly (possible transposable element) 65134730 65137270 64770 67310 NC_000014.9 velvet.61404 99.88 True fake: scaffold gap size wrong estimation (extensive) 65147993 65150445 68959 71455 NC_000014.9 velvet.61404 99.79 True fake: scaffold gap size wrong estimation (local) 65150825 65152034 72708 73917 NC_000014.9 velvet.61404 99.83 True relocation, scaffold gap is present, inconsistency = -14429 65137616 65138689 73928 75001 NC_000014.9 velvet.61404 99.91 True fake: scaffold gap size wrong estimation (local) 65141535 65144845 77855 81165 NC_000014.9 velvet.61404 100.0 True fake: not a misassembly (possible transposable element) 65038743 65040621 94398 96223 NC_000014.9 velvet.61404 97.0 True fake: not a misassembly (possible transposable element) 65155668 65157281 96736 98349 NC_000014.9 velvet.61404 100.0 True fake: scaffold gap size wrong estimation (local) 65158922 65160803 100745 102626 NC_000014.9 velvet.61404 99.95 True relocation, scaffold gap is present, inconsistency = -114535 65046279 65048001 102637 104362 NC_000014.9 velvet.61404 99.83 True relocation, scaffold gap is present, inconsistency = 122760 65172114 65172783 105715 106384 NC_000014.9 velvet.61404 99.7 True fake: scaffold gap size wrong estimation (local) 65173360 65175562 107655 109857 NC_000014.9 velvet.61404 99.95 True fake: scaffold gap size wrong estimation (local) 65176396 65177272 111609 112485 NC_000014.9 velvet.61404 98.75 True fake: scaffold gap size wrong estimation (local) 65177334 65178301 112496 113514 NC_000014.9 velvet.61404 99.78 True relocation, scaffold gap is present, inconsistency = 23774623 88966357 88970625 131215 126947 NC_000014.9 velvet.61404 99.88 True fake: scaffold gap size wrong estimation (local) 88959295 88959977 131908 131226 NC_000014.9 velvet.61404 98.54 True fake: scaffold gap size wrong estimation (local) 88954285 88957585 138118 134818 NC_000014.9 velvet.61404 99.91 True fake: not a misassembly (possible transposable element) 65209147 65210210 138129 139192 NC_000014.9 velvet.61404 99.81 True fake: not a misassembly (possible transposable element) 88951704 88954156 141655 139203 NC_000014.9 velvet.61404 99.88 True fake: scaffold gap size wrong estimation (local) 88950431 88951703 144332 143060 NC_000014.9 velvet.61404 95.76 True fake: scaffold gap size wrong estimation (local) 88949308 88950430 145487 144365 NC_000014.9 velvet.61404 99.11 True fake: scaffold gap size wrong estimation (local) 88947253 88949123 148648 146778 NC_000014.9 velvet.61404 99.95 True fake: scaffold gap size wrong estimation (local) 88946194 88946984 150086 148873 NC_000014.9 velvet.61404 100.0 True fake: scaffold gap size wrong estimation (local) 88942715 88946086 154006 150635 NC_000014.9 velvet.61404 99.91 True fake: scaffold gap size wrong estimation (local) 88939480 88942121 157770 155129 NC_000014.9 velvet.61404 99.89 True fake: scaffold gap size wrong estimation (local) 88937159 88938189 160735 159705 NC_000014.9 velvet.61404 100.0 True relocation, scaffold gap is present, inconsistency = 36379 88897352 88898895 162620 164163 NC_000014.9 velvet.61404 99.87 True fake: scaffold gap size wrong estimation (local) 88899204 88900010 164791 165597 NC_000014.9 velvet.61404 100.0 True fake: scaffold gap size wrong estimation (local) 88911838 88913202 176669 178028 NC_000014.9 velvet.61404 99.63 True fake: scaffold gap size wrong estimation (local) 88913248 88917473 178907 183170 NC_000014.9 velvet.61404 99.83 True fake: scaffold gap size wrong estimation (local) 88917621 88918240 183843 184462 NC_000014.9 velvet.61404 100.0 True fake: scaffold gap size wrong estimation (local) 88918508 88921245 185161 187898 NC_000014.9 velvet.61404 99.96 True fake: scaffold gap size wrong estimation (local) 88921730 88923835 189214 191319 NC_000014.9 velvet.61404 99.34 True local misassembly 88924097 88924609 191320 191832 NC_000014.9 velvet.61404 97.66 True relocation, scaffold gap is present, inconsistency = 2435306 91361083 91361980 193000 193896 NC_000014.9 velvet.61404 99.78 True fake: scaffold gap size wrong estimation (extensive) 91369490 91371254 193907 195671 NC_000014.9 velvet.61404 99.94 True relocation, scaffold gap is present, inconsistency = 2440931 88926702 88928336 197525 195894 NC_000014.9 velvet.61404 99.69 True relocation, scaffold gap is present, inconsistency = 2418517 91346864 91347494 197536 198166 NC_000014.9 velvet.61404 100.0 True fake: scaffold gap size wrong estimation (local) 91348482 91350193 200080 201791 NC_000014.9 velvet.61404 100.0 True fake: scaffold gap size wrong estimation (local) 91350463 91357549 202940 210024 NC_000014.9 velvet.61404 99.92 True fake: scaffold gap size wrong estimation (local) 91362964 91365194 210035 212265 NC_000014.9 velvet.61404 99.96 True fake: not a misassembly (possible transposable element) 91357616 91359180 212276 213840 NC_000014.9 velvet.61404 99.94 True fake: not a misassembly (possible transposable element) 91371274 91372535 213856 215117 NC_000014.9 velvet.61404 99.92 True fake: scaffold gap size wrong estimation (local) 91372578 91376158 215536 219116 NC_000014.9 velvet.61404 99.86 True fake: scaffold gap size wrong estimation (local) 91396992 91398437 243736 245181 NC_000014.9 velvet.61404 100.0 True fake: scaffold gap size wrong estimation (local) 91398675 91399584 246013 246922 NC_000014.9 velvet.61404 100.0 True fake: scaffold gap size wrong estimation (local) 91399885 91401411 247305 248831 NC_000014.9 velvet.61404 99.87 True fake: not a misassembly (possible transposable element) 91391790 91393156 248842 250349 NC_000014.9 velvet.61404 99.77 True fake: not a misassembly (possible transposable element) 91408080 91409200 250360 251480 NC_000014.9 velvet.61404 100.0 True fake: scaffold gap size wrong estimation (local) 91409788 91411721 252935 254868 NC_000014.9 velvet.61404 99.84 True fake: scaffold gap size wrong estimation (local) 91412738 91415386 256675 259323 NC_000014.9 velvet.61404 99.96 True fake: scaffold gap size wrong estimation (local) 91418270 91419927 259925 261582 NC_000014.9 velvet.61404 99.76 True fake: scaffold gap size wrong estimation (local) 91424098 91426127 266972 269047 NC_000014.9 velvet.61404 100.0 True relocation, scaffold gap is present, inconsistency = -32032 91402091 91403752 277043 278704 NC_000014.9 velvet.61404 99.94 True fake: scaffold gap size wrong estimation (local) 91403854 91404708 278819 279673 NC_000014.9 velvet.61404 100.0 True fake: scaffold gap size wrong estimation (local) 91405010 91407861 280763 283614 NC_000014.9 velvet.61404 99.96 True fake: scaffold gap size wrong estimation (local) 91444527 91445314 314017 314801 NC_000014.9 velvet.61404 99.36 True local misassembly 91442415 91443261 316337 317159 NC_000014.9 velvet.61404 97.13 True fake: scaffold gap size wrong estimation (extensive) 91443955 91444466 325020 325531 NC_000014.9 velvet.61404 100.0 True fake: scaffold gap size wrong estimation (extensive) 91479832 91481016 353231 354414 NC_000014.9 velvet.61404 99.83 True fake: scaffold gap size wrong estimation (local) 91481112 91486663 354906 361120 NC_000014.9 velvet.61404 99.33 True fake: scaffold gap size wrong estimation (local) 91487950 91488933 362893 363913 NC_000014.9 velvet.61404 99.79 True fake: scaffold gap size wrong estimation (local) 91489209 91490928 364818 366537 NC_000014.9 velvet.61404 99.94 True fake: scaffold gap size wrong estimation (extensive) 91500455 91501547 368527 369619 NC_000014.9 velvet.61404 99.09 True local misassembly 91497409 91498151 369630 370372 NC_000014.9 velvet.61404 99.87 True fake: scaffold gap size wrong estimation (extensive) 91531818 91532541 396487 397210 NC_000014.9 velvet.61404 100.0 True fake: scaffold gap size wrong estimation (local) 91532764 91533394 397945 398575 NC_000014.9 velvet.61404 100.0 True fake: scaffold gap size wrong estimation (local) 91534756 91535323 400230 400797 NC_000014.9 velvet.61404 100.0 True fake: scaffold gap size wrong estimation (local) 91536450 91537046 402396 402992 NC_000014.9 velvet.61404 100.0 True fake: scaffold gap size wrong estimation (local) 91537616 91538348 403223 403955 NC_000014.9 velvet.61404 100.0 True CONTIG velvet.61404 407246 misassembled 92809931 92811950 2020 1 NC_000014.9 velvet.61407 99.85 True fake: scaffold gap size wrong estimation (local) 92808703 92809671 4268 3300 NC_000014.9 velvet.61407 99.9 True fake: scaffold gap size wrong estimation (local) 92775034 92775702 33683 33015 NC_000014.9 velvet.61407 99.4 True relocation, scaffold gap is present, inconsistency = 18155 92754461 92756203 34359 36101 NC_000014.9 velvet.61407 99.14 True fake: scaffold gap size wrong estimation (local) 92757082 92762664 37892 43364 NC_000014.9 velvet.61407 96.18 True fake: scaffold gap size wrong estimation (local) 92763303 92763991 45263 45951 NC_000014.9 velvet.61407 100.0 True fake: scaffold gap size wrong estimation (local) 92765860 92766815 48621 49576 NC_000014.9 velvet.61407 99.06 True relocation, scaffold gap is present, inconsistency = 10432 92778346 92778888 50675 51217 NC_000014.9 velvet.61407 99.45 True fake: not a misassembly (possible transposable element) 40123531 40124930 53533 52134 NC_000014.9 velvet.61407 99.79 True fake: not a misassembly (possible transposable element) 92780326 92781758 53544 54976 NC_000014.9 velvet.61407 100.0 True fake: not a misassembly (possible transposable element) 40121277 40123223 56933 54987 NC_000014.9 velvet.61407 99.79 True fake: not a misassembly (possible transposable element) 92783486 92784388 57458 58360 NC_000014.9 velvet.61407 99.67 True relocation, scaffold gap is present, inconsistency = -52669770 40115017 40117584 58759 61384 NC_000014.9 velvet.61407 96.7 True inversion, scaffold gap is present 40117682 40121028 65283 61925 NC_000014.9 velvet.61407 99.73 True relocation, scaffold gap is present, inconsistency = 52665003 92786042 92787373 65294 66622 NC_000014.9 velvet.61407 99.77 True local misassembly 92785352 92786010 66633 67291 NC_000014.9 velvet.61407 100.0 True fake: scaffold gap size wrong estimation (local) 92787414 92788401 67302 68289 NC_000014.9 velvet.61407 99.8 True fake: scaffold gap size wrong estimation (local) 92788494 92792102 68890 72552 NC_000014.9 velvet.61407 99.94 True fake: scaffold gap size wrong estimation (local) 92792221 92794899 73495 76210 NC_000014.9 velvet.61407 99.89 True relocation, scaffold gap is present, inconsistency = 2448297 90328309 90329414 91825 90720 NC_000014.9 velvet.61407 100.0 True fake: scaffold gap size wrong estimation (local) 90326489 90327499 94793 93783 NC_000014.9 velvet.61407 98.91 True relocation, scaffold gap is present, inconsistency = 50236258 40084028 40084958 100996 100066 NC_000014.9 velvet.61407 99.79 True fake: scaffold gap size wrong estimation (local) 40082574 40083093 103144 102625 NC_000014.9 velvet.61407 99.42 True fake: scaffold gap size wrong estimation (local) 40066775 40081820 121391 105261 NC_000014.9 velvet.61407 99.67 True fake: scaffold gap size wrong estimation (local) 40063430 40066677 124928 121604 NC_000014.9 velvet.61407 99.78 True fake: scaffold gap size wrong estimation (local) 40059490 40063319 129971 125787 NC_000014.9 velvet.61407 99.84 True fake: scaffold gap size wrong estimation (local) 40047135 40059302 142782 130705 NC_000014.9 velvet.61407 99.05 True indel: indel (> 5bp) 40041457 40047059 148470 142881 NC_000014.9 velvet.61407 99.7 True fake: scaffold gap size wrong estimation (local) 40023405 40041160 168113 149563 NC_000014.9 velvet.61407 99.99 True fake: scaffold gap size wrong estimation (local) 40017867 40022275 174458 170033 NC_000014.9 velvet.61407 98.78 True relocation, scaffold gap is present, inconsistency = 8454 40008405 40009133 174738 175466 NC_000014.9 velvet.61407 99.86 True fake: not a misassembly (possible transposable element) 40009117 40010044 178428 177498 NC_000014.9 velvet.61407 99.35 True fake: not a misassembly (possible transposable element) 40005700 40007866 178439 180534 NC_000014.9 velvet.61407 96.71 True fake: scaffold gap size wrong estimation (local) 40010957 40017889 183823 190801 NC_000014.9 velvet.61407 99.29 True inversion, scaffold gap is present 40001228 40005651 195231 190812 NC_000014.9 velvet.61407 99.82 True fake: scaffold gap size wrong estimation (local) 39997765 40000922 199471 196285 NC_000014.9 velvet.61407 99.0 True fake: not a misassembly (possible transposable element) 39978957 39983313 203838 199482 NC_000014.9 velvet.61407 99.98 True fake: not a misassembly (possible transposable element) 39983347 39991869 213164 203849 NC_000014.9 velvet.61407 99.96 True fake: scaffold gap size wrong estimation (local) 39972718 39978935 219392 213175 NC_000014.9 velvet.61407 100.0 True fake: scaffold gap size wrong estimation (local) 39964471 39972689 228282 219926 NC_000014.9 velvet.61407 99.76 True fake: scaffold gap size wrong estimation (extensive) 39950805 39952149 234178 232773 NC_000014.9 velvet.61407 100.0 True fake: scaffold gap size wrong estimation (local) 39944422 39949840 242190 236028 NC_000014.9 velvet.61407 99.78 True fake: scaffold gap size wrong estimation (local) 39943042 39944329 243659 242327 NC_000014.9 velvet.61407 99.92 True fake: scaffold gap size wrong estimation (local) 39938403 39941786 249080 245697 NC_000014.9 velvet.61407 100.0 True relocation, scaffold gap is present, inconsistency = 8029592 31906425 31907903 251418 249988 NC_000014.9 velvet.61407 96.59 True fake: scaffold gap size wrong estimation (extensive) 31890692 31896610 258861 252943 NC_000014.9 velvet.61407 99.9 True fake: scaffold gap size wrong estimation (local) 31879678 31890370 270470 259920 NC_000014.9 velvet.61407 98.62 True fake: scaffold gap size wrong estimation (local) 31874308 31879433 276771 271148 NC_000014.9 velvet.61407 98.67 True fake: scaffold gap size wrong estimation (local) 31853317 31855065 294833 293085 NC_000014.9 velvet.61407 99.94 True fake: scaffold gap size wrong estimation (local) 31852562 31853084 295736 295214 NC_000014.9 velvet.61407 100.0 True fake: scaffold gap size wrong estimation (local) 31846925 31852388 302454 296303 NC_000014.9 velvet.61407 97.87 True fake: scaffold gap size wrong estimation (local) 31845637 31846687 304602 303552 NC_000014.9 velvet.61407 100.0 True fake: scaffold gap size wrong estimation (local) 31844806 31845393 305358 304771 NC_000014.9 velvet.61407 100.0 True fake: scaffold gap size wrong estimation (local) 31805842 31806711 338492 337612 NC_000014.9 velvet.61407 98.3 True relocation, scaffold gap is present, inconsistency = -22643 31827351 31828009 339626 338968 NC_000014.9 velvet.61407 99.85 True relocation, scaffold gap is present, inconsistency = -17283 31843831 31844621 340429 339639 NC_000014.9 velvet.61407 100.0 True relocation, scaffold gap is present, inconsistency = -13038394 44878825 44879487 343829 343167 NC_000014.9 velvet.61407 98.49 True local misassembly 44875262 44878587 347155 343830 NC_000014.9 velvet.61407 100.0 True relocation, scaffold gap is present, inconsistency = 4876060 39997034 39997655 349322 348702 NC_000014.9 velvet.61407 99.68 True fake: scaffold gap size wrong estimation (local) 39995456 39996886 351293 349863 NC_000014.9 velvet.61407 100.0 True fake: scaffold gap size wrong estimation (local) 39963740 39964434 382167 381484 NC_000014.9 velvet.61407 98.39 True fake: scaffold gap size wrong estimation (local) 39961342 39961853 385615 385104 NC_000014.9 velvet.61407 100.0 True fake: scaffold gap size wrong estimation (local) 39957034 39960569 390641 387197 NC_000014.9 velvet.61407 97.31 True fake: scaffold gap size wrong estimation (local) 39953590 39956748 394814 391524 NC_000014.9 velvet.61407 99.97 True relocation, scaffold gap is present, inconsistency = 8009103 31937404 31938361 401893 400940 NC_000014.9 velvet.61407 99.58 True fake: not a misassembly (possible transposable element) 31938874 31940668 401915 403709 NC_000014.9 velvet.61407 99.83 True fake: not a misassembly (possible transposable element) 31934182 31937117 406655 403720 NC_000014.9 velvet.61407 99.83 True fake: scaffold gap size wrong estimation (local) 31929003 31930424 408087 406666 NC_000014.9 velvet.61407 99.58 True relocation, scaffold gap is present, inconsistency = 13649821 45580950 45581756 408792 409598 NC_000014.9 velvet.61407 99.88 True fake: scaffold gap size wrong estimation (local) 45582046 45588015 410669 416638 NC_000014.9 velvet.61407 99.92 True fake: not a misassembly (possible transposable element) 31931918 31933227 417958 416649 NC_000014.9 velvet.61407 99.85 True fake: not a misassembly (possible transposable element) 45588205 45588807 417969 418571 NC_000014.9 velvet.61407 100.0 True fake: scaffold gap size wrong estimation (local) 45589930 45591167 420361 421598 NC_000014.9 velvet.61407 99.76 True fake: not a misassembly (possible transposable element) 39937209 39938135 427537 426611 NC_000014.9 velvet.61407 100.0 True fake: not a misassembly (possible transposable element) 45593862 45596662 427548 430348 NC_000014.9 velvet.61407 99.89 True relocation, scaffold gap is present, inconsistency = 5658444 39930306 39935407 435460 430359 NC_000014.9 velvet.61407 99.98 True relocation, scaffold gap is present, inconsistency = 46761134 86696552 86697181 435471 436100 NC_000014.9 velvet.61407 100.0 True fake: scaffold gap size wrong estimation (local) 86698472 86701062 438244 440834 NC_000014.9 velvet.61407 99.88 True fake: scaffold gap size wrong estimation (local) 86701361 86705008 441899 446301 NC_000014.9 velvet.61407 99.83 True indel: indel (> 5bp) 86705051 86706793 446384 448085 NC_000014.9 velvet.61407 97.0 True fake: scaffold gap size wrong estimation (local) 86707055 86708069 448798 449812 NC_000014.9 velvet.61407 99.9 True fake: scaffold gap size wrong estimation (local) 86708341 86710275 450735 452669 NC_000014.9 velvet.61407 99.95 True fake: scaffold gap size wrong estimation (local) 86710561 86711634 453731 454804 NC_000014.9 velvet.61407 99.72 True relocation, scaffold gap is present, inconsistency = 54779353 31930484 31931197 455528 454815 NC_000014.9 velvet.61407 99.86 True fake: scaffold gap size wrong estimation (local) 31924089 31928957 462752 457768 NC_000014.9 velvet.61407 99.86 True fake: scaffold gap size wrong estimation (local) 31918834 31923794 468789 463832 NC_000014.9 velvet.61407 99.64 True fake: scaffold gap size wrong estimation (local) 31915224 31918360 473296 469658 NC_000014.9 velvet.61407 99.84 True fake: scaffold gap size wrong estimation (extensive) 31899647 31906318 479978 473307 NC_000014.9 velvet.61407 99.84 True relocation, scaffold gap is present, inconsistency = -15054 31910484 31914665 484197 480014 NC_000014.9 velvet.61407 99.76 True fake: scaffold gap size wrong estimation (local) 31908946 31910262 485962 484646 NC_000014.9 velvet.61407 100.0 True fake: scaffold gap size wrong estimation (extensive) 31897178 31899619 488557 486116 NC_000014.9 velvet.61407 99.96 True fake: scaffold gap size wrong estimation (local) 31871681 31874284 511972 509369 NC_000014.9 velvet.61407 99.92 True fake: scaffold gap size wrong estimation (local) 31869596 31870200 515668 515064 NC_000014.9 velvet.61407 99.83 True fake: scaffold gap size wrong estimation (local) 31867554 31868055 518351 517850 NC_000014.9 velvet.61407 99.8 True fake: scaffold gap size wrong estimation (local) 31863624 31865224 522914 521334 NC_000014.9 velvet.61407 98.68 True fake: scaffold gap size wrong estimation (local) 31860303 31863328 526940 523507 NC_000014.9 velvet.61407 99.73 True fake: scaffold gap size wrong estimation (local) 31858034 31860009 529972 527944 NC_000014.9 velvet.61407 96.72 True fake: scaffold gap size wrong estimation (local) 31842175 31843799 539563 537251 NC_000014.9 velvet.61407 99.94 True fake: scaffold gap size wrong estimation (local) 31840594 31841878 541067 539803 NC_000014.9 velvet.61407 98.35 True fake: scaffold gap size wrong estimation (local) 31834451 31840284 548031 542133 NC_000014.9 velvet.61407 99.88 True fake: scaffold gap size wrong estimation (local) 31831304 31834159 552003 549101 NC_000014.9 velvet.61407 99.65 True fake: scaffold gap size wrong estimation (local) 31828038 31831030 555991 552999 NC_000014.9 velvet.61407 99.9 True fake: scaffold gap size wrong estimation (local) 31826392 31827335 558290 557347 NC_000014.9 velvet.61407 99.79 True fake: scaffold gap size wrong estimation (local) 31821793 31825625 563486 559653 NC_000014.9 velvet.61407 99.95 True fake: scaffold gap size wrong estimation (local) 31818813 31819862 567594 566566 NC_000014.9 velvet.61407 97.88 True relocation, scaffold gap is present, inconsistency = -30496075 62307824 62312511 574742 569971 NC_000014.9 velvet.61407 99.36 True fake: scaffold gap size wrong estimation (local) 62303581 62305679 579588 577490 NC_000014.9 velvet.61407 99.95 True relocation, scaffold gap is present, inconsistency = 30496251 31802566 31804968 584329 581950 NC_000014.9 velvet.61407 99.0 True fake: scaffold gap size wrong estimation (local) 31798919 31802266 588760 585434 NC_000014.9 velvet.61407 99.22 True relocation, scaffold gap is present, inconsistency = -14232 31780299 31782212 621612 619699 NC_000014.9 velvet.61407 97.7 True fake: scaffold gap size wrong estimation (local) 31779296 31780045 622914 622165 NC_000014.9 velvet.61407 100.0 True fake: scaffold gap size wrong estimation (local) 31775411 31779062 627399 623748 NC_000014.9 velvet.61407 99.89 True fake: scaffold gap size wrong estimation (local) 31767484 31775134 636867 628464 NC_000014.9 velvet.61407 99.87 True fake: scaffold gap size wrong estimation (local) 31763882 31767192 641274 637967 NC_000014.9 velvet.61407 99.82 True fake: not a misassembly (possible transposable element) 31782788 31783620 642117 641285 NC_000014.9 velvet.61407 100.0 True fake: not a misassembly (possible transposable element) 31730721 31731946 668014 666789 NC_000014.9 velvet.61407 99.76 True fake: scaffold gap size wrong estimation (local) 31729290 31730458 669637 668469 NC_000014.9 velvet.61407 100.0 True fake: scaffold gap size wrong estimation (local) 31725980 31728372 673678 671285 NC_000014.9 velvet.61407 99.79 True fake: scaffold gap size wrong estimation (local) 31723646 31725702 676812 674754 NC_000014.9 velvet.61407 99.51 True fake: scaffold gap size wrong estimation (local) 31716176 31721798 685841 679206 NC_000014.9 velvet.61407 99.89 True relocation, scaffold gap is present, inconsistency = -13437964 45152261 45154129 687720 685852 NC_000014.9 velvet.61407 100.0 True fake: scaffold gap size wrong estimation (local) 45148118 45151904 693295 688815 NC_000014.9 velvet.61407 99.92 True fake: scaffold gap size wrong estimation (local) 45146834 45147726 694710 693818 NC_000014.9 velvet.61407 100.0 True fake: scaffold gap size wrong estimation (local) 45143172 45143685 699833 699318 NC_000014.9 velvet.61407 100.0 True relocation, scaffold gap is present, inconsistency = -26736795 71878799 71879811 701038 699989 NC_000014.9 velvet.61407 96.19 True relocation, scaffold gap is present, inconsistency = 6485731 65387091 65388478 707015 705628 NC_000014.9 velvet.61407 99.28 True fake: scaffold gap size wrong estimation (local) 65385173 65385728 709889 709335 NC_000014.9 velvet.61407 99.82 True fake: scaffold gap size wrong estimation (local) 65384380 65384895 710489 709974 NC_000014.9 velvet.61407 100.0 True fake: scaffold gap size wrong estimation (local) 65383543 65384334 711358 710567 NC_000014.9 velvet.61407 100.0 True relocation, scaffold gap is present, inconsistency = 13668 65368933 65369864 712300 711369 NC_000014.9 velvet.61407 99.68 True fake: scaffold gap size wrong estimation (local) 65364474 65365325 713162 712311 NC_000014.9 velvet.61407 99.88 True relocation, scaffold gap is present, inconsistency = -18781 65382601 65383244 713816 713173 NC_000014.9 velvet.61407 100.0 True fake: scaffold gap size wrong estimation (local) 65380348 65382348 716616 714616 NC_000014.9 velvet.61407 99.95 True fake: scaffold gap size wrong estimation (local) 65372689 65374603 718692 716778 NC_000014.9 velvet.61407 99.84 True relocation, scaffold gap is present, inconsistency = -7833 65376678 65378831 722536 720383 NC_000014.9 velvet.61407 100.0 True relocation, scaffold gap is present, inconsistency = 33672136 31694741 31698854 732490 728224 NC_000014.9 velvet.61407 99.85 True fake: scaffold gap size wrong estimation (local) 31690092 31693789 737884 734234 NC_000014.9 velvet.61407 98.43 True fake: scaffold gap size wrong estimation (local) 31670732 31672590 763385 761535 NC_000014.9 velvet.61407 99.41 True fake: not a misassembly (possible transposable element) 65351435 65352283 764360 763512 NC_000014.9 velvet.61407 100.0 True fake: not a misassembly (possible transposable element) 31646459 31648830 783750 781379 NC_000014.9 velvet.61407 100.0 True fake: scaffold gap size wrong estimation (local) 31645337 31646299 785660 784663 NC_000014.9 velvet.61407 99.9 True fake: scaffold gap size wrong estimation (local) 31642139 31645051 789010 786098 NC_000014.9 velvet.61407 99.55 True local misassembly 31641223 31641895 789683 789011 NC_000014.9 velvet.61407 99.85 True fake: scaffold gap size wrong estimation (local) 31608535 31609183 818412 817764 NC_000014.9 velvet.61407 100.0 True CONTIG velvet.61407 818560 misassembled 20131332 20132418 228 1314 NC_000014.9 velvet.61412 99.91 True fake: scaffold gap size wrong estimation (local) 20134125 20134735 3639 4299 NC_000014.9 velvet.61412 100.0 True fake: scaffold gap size wrong estimation (local) 20134798 20142156 4993 12351 NC_000014.9 velvet.61412 99.96 True fake: scaffold gap size wrong estimation (local) 20142416 20151618 13345 23600 NC_000014.9 velvet.61412 99.3 True fake: scaffold gap size wrong estimation (local) 20153757 20155215 26276 27734 NC_000014.9 velvet.61412 100.0 True fake: scaffold gap size wrong estimation (local) 20162628 20171741 34458 44253 NC_000014.9 velvet.61412 95.85 True fake: scaffold gap size wrong estimation (local) 20172041 20174107 45724 47767 NC_000014.9 velvet.61412 98.64 True fake: scaffold gap size wrong estimation (local) 20174894 20177109 49502 51696 NC_000014.9 velvet.61412 99.0 True fake: scaffold gap size wrong estimation (local) 20177443 20177985 52510 53052 NC_000014.9 velvet.61412 99.82 True fake: scaffold gap size wrong estimation (local) 20178088 20179000 53447 54359 NC_000014.9 velvet.61412 100.0 True fake: scaffold gap size wrong estimation (local) 20179117 20185678 54760 61976 NC_000014.9 velvet.61412 99.91 True fake: scaffold gap size wrong estimation (extensive) 20198754 20201217 67973 70437 NC_000014.9 velvet.61412 99.84 True relocation, scaffold gap is present, inconsistency = 75226636 95434925 95437636 80220 77509 NC_000014.9 velvet.61412 99.89 True fake: scaffold gap size wrong estimation (local) 95430826 95432630 84872 83068 NC_000014.9 velvet.61412 99.72 True fake: scaffold gap size wrong estimation (local) 95427792 95430538 88689 85951 NC_000014.9 velvet.61412 99.49 True relocation, scaffold gap is present, inconsistency = 75212304 20213483 20215477 88700 90693 NC_000014.9 velvet.61412 99.9 True fake: scaffold gap size wrong estimation (local) 20215601 20216762 91183 92332 NC_000014.9 velvet.61412 98.09 True fake: scaffold gap size wrong estimation (local) 20218476 20220292 95738 97535 NC_000014.9 velvet.61412 98.62 True fake: scaffold gap size wrong estimation (local) 20220709 20221281 98046 98618 NC_000014.9 velvet.61412 99.83 True fake: scaffold gap size wrong estimation (local) 20222006 20225069 100041 103104 NC_000014.9 velvet.61412 99.74 True fake: scaffold gap size wrong estimation (local) 20225726 20230602 104455 110297 NC_000014.9 velvet.61412 99.69 True relocation, scaffold gap is present, inconsistency = 75170315 95400928 95402608 110308 111988 NC_000014.9 velvet.61412 100.0 True relocation, scaffold gap is present, inconsistency = 21049 95423964 95424956 113287 112295 NC_000014.9 velvet.61412 99.7 True fake: scaffold gap size wrong estimation (local) 95421184 95423491 116697 114390 NC_000014.9 velvet.61412 99.48 True fake: not a misassembly (possible transposable element) 95432652 95434660 118716 116708 NC_000014.9 velvet.61412 100.0 True fake: not a misassembly (possible transposable element) 95418872 95420851 120772 118727 NC_000014.9 velvet.61412 96.68 True fake: scaffold gap size wrong estimation (local) 95415968 95418617 124679 122030 NC_000014.9 velvet.61412 99.85 True fake: scaffold gap size wrong estimation (local) 95406190 95415619 135348 125797 NC_000014.9 velvet.61412 98.97 True fake: scaffold gap size wrong estimation (local) 95403851 95405927 138375 136299 NC_000014.9 velvet.61412 99.95 True fake: scaffold gap size wrong estimation (local) 95402877 95403589 139744 139032 NC_000014.9 velvet.61412 100.0 True fake: scaffold gap size wrong estimation (local) 95396314 95399991 143725 140048 NC_000014.9 velvet.61412 99.67 True fake: scaffold gap size wrong estimation (local) 95389412 95396006 150648 144126 NC_000014.9 velvet.61412 98.86 True fake: scaffold gap size wrong estimation (local) 95387117 95389123 153723 151717 NC_000014.9 velvet.61412 99.75 True indel: indel (> 5bp) 95386500 95387037 154261 153724 NC_000014.9 velvet.61412 99.26 True fake: scaffold gap size wrong estimation (local) 95379373 95386193 162283 155463 NC_000014.9 velvet.61412 99.82 True relocation, scaffold gap is present, inconsistency = 20191911 75186260 75187451 162294 163485 NC_000014.9 velvet.61412 100.0 True fake: scaffold gap size wrong estimation (local) 75219604 75220606 192889 193891 NC_000014.9 velvet.61412 99.9 True relocation, scaffold gap is present, inconsistency = 20148581 95369198 95372060 196758 193902 NC_000014.9 velvet.61412 99.72 True fake: scaffold gap size wrong estimation (local) 95367599 95368491 199146 198254 NC_000014.9 velvet.61412 98.77 True fake: scaffold gap size wrong estimation (local) 95362327 95364621 201504 199210 NC_000014.9 velvet.61412 98.61 True fake: scaffold gap size wrong estimation (local) 95359754 95362326 204265 201693 NC_000014.9 velvet.61412 97.9 True fake: scaffold gap size wrong estimation (local) 95359057 95359753 205391 204695 NC_000014.9 velvet.61412 99.71 True fake: scaffold gap size wrong estimation (local) 95339184 95342513 223121 219792 NC_000014.9 velvet.61412 99.88 True fake: scaffold gap size wrong estimation (local) 95328368 95330618 233355 231105 NC_000014.9 velvet.61412 99.96 True relocation, scaffold gap is present, inconsistency = -10540 95330858 95338897 241408 233366 NC_000014.9 velvet.61412 99.8 True relocation, scaffold gap is present, inconsistency = 12501272 82825914 82829575 241419 245080 NC_000014.9 velvet.61412 100.0 True fake: scaffold gap size wrong estimation (local) 82829822 82830662 246067 246907 NC_000014.9 velvet.61412 100.0 True relocation, scaffold gap is present, inconsistency = 12475851 95313195 95319299 259815 253589 NC_000014.9 velvet.61412 99.97 True fake: scaffold gap size wrong estimation (local) 95306503 95312922 267222 260799 NC_000014.9 velvet.61412 99.83 True fake: scaffold gap size wrong estimation (local) 95304218 95306349 270236 268104 NC_000014.9 velvet.61412 99.77 True relocation, scaffold gap is present, inconsistency = -24768 95324881 95325662 274341 273560 NC_000014.9 velvet.61412 99.74 True fake: scaffold gap size wrong estimation (local) 95320131 95324622 279857 275367 NC_000014.9 velvet.61412 99.93 True relocation, scaffold gap is present, inconsistency = 20062190 75257152 75257930 279868 280646 NC_000014.9 velvet.61412 100.0 True relocation, scaffold gap is present, inconsistency = 20067995 95325936 95328149 282870 280657 NC_000014.9 velvet.61412 99.91 True relocation, scaffold gap is present, inconsistency = 12494078 82830672 82831847 282881 284056 NC_000014.9 velvet.61412 100.0 True fake: not a misassembly (possible transposable element) 75254248 75255904 284067 285723 NC_000014.9 velvet.61412 99.82 True fake: not a misassembly (possible transposable element) 82832109 82836198 285734 289823 NC_000014.9 velvet.61412 99.73 True fake: scaffold gap size wrong estimation (local) 82836199 82837723 295111 296635 NC_000014.9 velvet.61412 99.41 True indel: indel (<= 5bp) 82837725 82846288 296636 305199 NC_000014.9 velvet.61412 100.0 True fake: scaffold gap size wrong estimation (local) 82846289 82851014 305930 310655 NC_000014.9 velvet.61412 99.47 True fake: scaffold gap size wrong estimation (local) 82851338 82857220 311613 317363 NC_000014.9 velvet.61412 97.74 True relocation, scaffold gap is present, inconsistency = -48600004 34257227 34265122 317374 325405 NC_000014.9 velvet.61412 99.87 True relocation, scaffold gap is present, inconsistency = 41034510 75299643 75300487 325416 326260 NC_000014.9 velvet.61412 100.0 True local misassembly 75300745 75301393 326261 326909 NC_000014.9 velvet.61412 98.46 True relocation, scaffold gap is present, inconsistency = 19959038 95260442 95262565 329092 326920 NC_000014.9 velvet.61412 99.95 True fake: scaffold gap size wrong estimation (local) 95259060 95260157 330857 329760 NC_000014.9 velvet.61412 100.0 True fake: not a misassembly (possible transposable element) 95269070 95270509 333183 331744 NC_000014.9 velvet.61412 100.0 True fake: not a misassembly (possible transposable element) 95254753 95258418 336859 333194 NC_000014.9 velvet.61412 100.0 True fake: not a misassembly (possible transposable element) 95265242 95268360 339946 336870 NC_000014.9 velvet.61412 98.48 True fake: not a misassembly (possible transposable element) 95253878 95254706 341136 340308 NC_000014.9 velvet.61412 100.0 True relocation, scaffold gap is present, inconsistency = -10961 95264075 95264789 341929 341186 NC_000014.9 velvet.61412 95.83 True relocation, scaffold gap is present, inconsistency = 37506 95302306 95304086 341940 343720 NC_000014.9 velvet.61412 99.94 True inversion, scaffold gap is present 95293385 95302084 352533 343731 NC_000014.9 velvet.61412 99.39 True fake: scaffold gap size wrong estimation (local) 95289519 95293106 357147 353475 NC_000014.9 velvet.61412 99.92 True relocation, scaffold gap is present, inconsistency = 12426610 82857529 82862898 357158 362527 NC_000014.9 velvet.61412 100.0 True fake: scaffold gap size wrong estimation (local) 82863193 82870586 363603 370996 NC_000014.9 velvet.61412 99.97 True fake: scaffold gap size wrong estimation (local) 82870587 82873801 375763 378977 NC_000014.9 velvet.61412 99.81 True relocation, scaffold gap is present, inconsistency = -7575696 75298116 75299555 378988 380427 NC_000014.9 velvet.61412 99.93 True relocation, scaffold gap is present, inconsistency = -49965867 25333699 25336142 380438 383190 NC_000014.9 velvet.61412 97.96 True relocation, scaffold gap is present, inconsistency = 50365684 75704457 75708269 390374 385821 NC_000014.9 velvet.61412 99.95 True fake: scaffold gap size wrong estimation (local) 75698761 75704253 396808 391315 NC_000014.9 velvet.61412 99.93 True fake: scaffold gap size wrong estimation (local) 75695888 75698655 400473 397706 NC_000014.9 velvet.61412 99.96 True fake: scaffold gap size wrong estimation (local) 75694600 75695790 402109 400918 NC_000014.9 velvet.61412 97.74 True fake: scaffold gap size wrong estimation (local) 75687554 75694373 409678 402743 NC_000014.9 velvet.61412 99.84 True fake: scaffold gap size wrong estimation (local) 75684044 75687313 413986 410669 NC_000014.9 velvet.61412 99.6 True fake: scaffold gap size wrong estimation (local) 75683012 75683762 415480 414730 NC_000014.9 velvet.61412 96.4 True fake: scaffold gap size wrong estimation (local) 75682192 75682869 416473 415796 NC_000014.9 velvet.61412 99.85 True fake: scaffold gap size wrong estimation (local) 75680902 75681972 418232 417162 NC_000014.9 velvet.61412 99.91 True fake: not a misassembly (possible transposable element) 96958091 96961455 418243 421607 NC_000014.9 velvet.61412 99.88 True fake: not a misassembly (possible transposable element) 75677898 75680608 424327 421618 NC_000014.9 velvet.61412 99.93 True relocation, scaffold gap is present, inconsistency = 345762 75330404 75331965 424498 426059 NC_000014.9 velvet.61412 100.0 True relocation, scaffold gap is present, inconsistency = 17341801 92673777 92674396 426668 426070 NC_000014.9 velvet.61412 96.39 True relocation, scaffold gap is present, inconsistency = 16995376 75676779 75677369 428270 427700 NC_000014.9 velvet.61412 96.56 True fake: scaffold gap size wrong estimation (local) 75668029 75671604 441511 437936 NC_000014.9 velvet.61412 99.92 True fake: scaffold gap size wrong estimation (local) 75665840 75667741 444473 442572 NC_000014.9 velvet.61412 100.0 True fake: scaffold gap size wrong estimation (local) 75664074 75665572 446734 445236 NC_000014.9 velvet.61412 99.93 True fake: scaffold gap size wrong estimation (local) 75662621 75663813 448419 447227 NC_000014.9 velvet.61412 99.92 True fake: scaffold gap size wrong estimation (local) 75661118 75662311 450710 449517 NC_000014.9 velvet.61412 99.83 True CONTIG velvet.61412 450710 misassembled 103557949 103563914 1 6153 NC_000014.9 velvet.61414 99.97 True fake: scaffold gap size wrong estimation (local) 103566401 103566958 9644 10201 NC_000014.9 velvet.61414 100.0 True local misassembly 103567395 103568461 10202 11268 NC_000014.9 velvet.61414 98.97 True fake: scaffold gap size wrong estimation (local) 103568927 103569886 13026 13985 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 103595016 103595874 35523 36381 NC_000014.9 velvet.61414 99.77 True relocation, scaffold gap is present, inconsistency = -25198 103573823 103575751 39528 41508 NC_000014.9 velvet.61414 99.95 True fake: scaffold gap size wrong estimation (local) 103576320 103577104 42568 43352 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 103578181 103579386 45206 46411 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 103581105 103583285 48842 51028 NC_000014.9 velvet.61414 99.95 True fake: scaffold gap size wrong estimation (local) 103583573 103584887 52317 53628 NC_000014.9 velvet.61414 99.77 True fake: scaffold gap size wrong estimation (local) 103586988 103587498 56839 57349 NC_000014.9 velvet.61414 99.8 True fake: scaffold gap size wrong estimation (local) 103589945 103590611 60500 61166 NC_000014.9 velvet.61414 100.0 True local misassembly 103588837 103589660 61177 62001 NC_000014.9 velvet.61414 99.76 True fake: scaffold gap size wrong estimation (local) 103590840 103591363 65182 65705 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 103594107 103594783 69151 69827 NC_000014.9 velvet.61414 99.85 True fake: scaffold gap size wrong estimation (extensive) 103606941 103608472 73456 74987 NC_000014.9 velvet.61414 100.0 True relocation, scaffold gap is present, inconsistency = -15183 103597748 103598789 79446 80487 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 103604523 103605821 87066 88364 NC_000014.9 velvet.61414 99.85 True fake: scaffold gap size wrong estimation (local) 103613633 103614515 99298 100180 NC_000014.9 velvet.61414 99.77 True relocation, scaffold gap is present, inconsistency = -1467492 102152717 102153324 105874 106481 NC_000014.9 velvet.61414 99.84 True fake: scaffold gap size wrong estimation (local) 102153647 102155797 107537 109672 NC_000014.9 velvet.61414 99.21 True fake: scaffold gap size wrong estimation (local) 102157248 102158345 111749 112846 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 102159923 102160694 114494 115265 NC_000014.9 velvet.61414 99.87 True local misassembly 102158597 102159813 115440 116656 NC_000014.9 velvet.61414 99.84 True relocation, scaffold gap is present, inconsistency = -15881 102144979 102145775 117703 118499 NC_000014.9 velvet.61414 100.0 True local misassembly 102146448 102147156 118894 119602 NC_000014.9 velvet.61414 98.45 True relocation, scaffold gap is present, inconsistency = 14184 102161462 102162671 119724 120933 NC_000014.9 velvet.61414 99.92 True relocation, scaffold gap is present, inconsistency = 18688 102183051 102186698 122625 126342 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 102186984 102188630 127329 128975 NC_000014.9 velvet.61414 100.0 True relocation, scaffold gap is present, inconsistency = 1443540 103633369 103633890 130174 130695 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 103634170 103635510 131615 133031 NC_000014.9 velvet.61414 95.17 True fake: scaffold gap size wrong estimation (local) 103635749 103636249 133288 133788 NC_000014.9 velvet.61414 100.0 True relocation, scaffold gap is present, inconsistency = 13935025 89697770 89699777 136742 134735 NC_000014.9 velvet.61414 99.9 True relocation, scaffold gap is present, inconsistency = 32563142 57133529 57134613 136757 137841 NC_000014.9 velvet.61414 99.91 True fake: scaffold gap size wrong estimation (local) 57134841 57138831 138893 142883 NC_000014.9 velvet.61414 99.95 True fake: scaffold gap size wrong estimation (local) 57139094 57139875 143823 144603 NC_000014.9 velvet.61414 99.87 True relocation, scaffold gap is present, inconsistency = 32905754 90050222 90053984 152958 149196 NC_000014.9 velvet.61414 100.0 True relocation, scaffold gap is present, inconsistency = 13605875 103660755 103663108 153854 156207 NC_000014.9 velvet.61414 99.79 True fake: scaffold gap size wrong estimation (local) 103663386 103664181 157474 158269 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 103667626 103668505 161987 162866 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 103669473 103670352 164859 165737 NC_000014.9 velvet.61414 99.89 True fake: scaffold gap size wrong estimation (local) 103671673 103673668 167826 169821 NC_000014.9 velvet.61414 99.9 True relocation, scaffold gap is present, inconsistency = 29510478 74159905 74161184 171111 169832 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 74158777 74159573 173503 172707 NC_000014.9 velvet.61414 100.0 True relocation, scaffold gap is present, inconsistency = 16989312 57166381 57169310 173658 176587 NC_000014.9 velvet.61414 99.93 True fake: scaffold gap size wrong estimation (local) 57169585 57172563 177640 180618 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 57172819 57180296 181632 189177 NC_000014.9 velvet.61414 99.93 True relocation, scaffold gap is present, inconsistency = 16948665 74128972 74129842 189188 190058 NC_000014.9 velvet.61414 99.89 True fake: scaffold gap size wrong estimation (local) 74131603 74132571 192906 193874 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 74133046 74135102 195178 197234 NC_000014.9 velvet.61414 99.95 True relocation, scaffold gap is present, inconsistency = 34267 74176387 74176983 204848 204252 NC_000014.9 velvet.61414 99.83 True fake: scaffold gap size wrong estimation (local) 74173415 74174713 208973 207675 NC_000014.9 velvet.61414 99.15 True local misassembly 74172002 74173186 210158 208974 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 74169003 74171323 214026 211337 NC_000014.9 velvet.61414 99.82 True fake: scaffold gap size wrong estimation (local) 74166488 74167112 217392 216768 NC_000014.9 velvet.61414 98.24 True fake: scaffold gap size wrong estimation (local) 74164549 74165495 220297 219351 NC_000014.9 velvet.61414 98.73 True local misassembly 74163252 74163968 221014 220298 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 74161414 74162211 224240 223443 NC_000014.9 velvet.61414 100.0 True relocation, scaffold gap is present, inconsistency = 33310736 40847321 40848016 226902 227597 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 40848317 40852356 227999 232794 NC_000014.9 velvet.61414 99.87 True fake: scaffold gap size wrong estimation (local) 40852660 40860388 233753 241794 NC_000014.9 velvet.61414 98.63 True fake: scaffold gap size wrong estimation (local) 40860784 40862558 243059 244872 NC_000014.9 velvet.61414 99.2 True relocation, scaffold gap is present, inconsistency = 33248360 74120891 74121720 255653 254845 NC_000014.9 velvet.61414 97.44 True local misassembly 74122891 74124088 259906 258709 NC_000014.9 velvet.61414 100.0 True relocation, scaffold gap is present, inconsistency = 16924513 57192035 57198367 259917 266238 NC_000014.9 velvet.61414 99.83 True fake: scaffold gap size wrong estimation (local) 57199967 57201526 268663 270268 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 57201881 57211678 271327 281124 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 57212145 57213135 283652 284642 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 57213962 57215031 285938 287007 NC_000014.9 velvet.61414 100.0 True relocation, scaffold gap is present, inconsistency = -16320847 40894195 40896527 287018 289343 NC_000014.9 velvet.61414 97.22 True fake: scaffold gap size wrong estimation (local) 40896674 40897673 290136 291135 NC_000014.9 velvet.61414 99.9 True fake: scaffold gap size wrong estimation (local) 40898232 40900870 292325 294963 NC_000014.9 velvet.61414 99.85 True fake: scaffold gap size wrong estimation (local) 40923808 40927328 315737 319257 NC_000014.9 velvet.61414 99.89 True fake: scaffold gap size wrong estimation (local) 40929613 40932682 322174 325293 NC_000014.9 velvet.61414 99.97 True fake: scaffold gap size wrong estimation (local) 40932970 40938097 326139 331938 NC_000014.9 velvet.61414 99.52 True fake: scaffold gap size wrong estimation (local) 40938213 40941171 332818 335776 NC_000014.9 velvet.61414 99.97 True fake: scaffold gap size wrong estimation (local) 40941438 40947376 336759 343517 NC_000014.9 velvet.61414 99.86 True fake: scaffold gap size wrong estimation (local) 40947736 40948881 344843 345988 NC_000014.9 velvet.61414 100.0 True relocation, scaffold gap is present, inconsistency = 16266371 57215263 57224702 345999 356160 NC_000014.9 velvet.61414 96.44 True fake: scaffold gap size wrong estimation (local) 57225062 57227961 356855 360213 NC_000014.9 velvet.61414 97.67 True fake: scaffold gap size wrong estimation (local) 57228871 57231038 361880 364047 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 57231278 57234509 365021 368311 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 57234601 57236301 369048 370748 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 57236570 57238239 371241 372910 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 57238415 57240236 373844 375665 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 57241144 57241879 377225 377960 NC_000014.9 velvet.61414 99.86 True fake: scaffold gap size wrong estimation (local) 57242960 57244797 379274 381111 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 57245025 57245808 381688 382471 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 57246081 57249808 383296 387106 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 57250073 57254178 388157 392951 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 57254468 57255644 393528 394704 NC_000014.9 velvet.61414 100.0 True fake: not a misassembly (possible transposable element) 77801906 77802506 394878 395478 NC_000014.9 velvet.61414 99.67 True fake: not a misassembly (possible transposable element) 57255831 57258157 395739 398065 NC_000014.9 velvet.61414 98.32 True fake: scaffold gap size wrong estimation (local) 57259297 57262560 400035 403298 NC_000014.9 velvet.61414 100.0 True local misassembly 57268086 57269844 403299 405057 NC_000014.9 velvet.61414 99.43 True fake: scaffold gap size wrong estimation (local) 57270103 57272954 406081 408932 NC_000014.9 velvet.61414 99.96 True fake: scaffold gap size wrong estimation (local) 57273195 57276328 409973 413106 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 57276488 57279198 414367 417090 NC_000014.9 velvet.61414 98.8 True fake: scaffold gap size wrong estimation (local) 57279479 57280595 418017 419133 NC_000014.9 velvet.61414 99.91 True fake: scaffold gap size wrong estimation (local) 57283816 57303039 421659 441252 NC_000014.9 velvet.61414 99.8 True fake: scaffold gap size wrong estimation (local) 57303338 57310556 442295 449505 NC_000014.9 velvet.61414 99.76 True fake: scaffold gap size wrong estimation (local) 57344772 57345633 479868 480729 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 57345812 57348895 480938 484861 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 57349014 57351243 485015 487949 NC_000014.9 velvet.61414 99.95 True fake: scaffold gap size wrong estimation (local) 57351517 57353919 488920 491322 NC_000014.9 velvet.61414 99.96 True inversion, scaffold gap is present 57367210 57367975 501001 500236 NC_000014.9 velvet.61414 98.17 True fake: scaffold gap size wrong estimation (local) 57366068 57366624 501732 501176 NC_000014.9 velvet.61414 99.28 True fake: scaffold gap size wrong estimation (local) 57364520 57365355 502997 502162 NC_000014.9 velvet.61414 99.04 True inversion, scaffold gap is present 57370709 57371934 503026 504251 NC_000014.9 velvet.61414 99.76 True fake: scaffold gap size wrong estimation (extensive) 57380081 57380787 504411 505117 NC_000014.9 velvet.61414 99.86 True fake: scaffold gap size wrong estimation (local) 57380911 57384029 506085 509167 NC_000014.9 velvet.61414 98.53 True relocation, scaffold gap is present, inconsistency = 17167 57354713 57363733 518700 509178 NC_000014.9 velvet.61414 99.96 True relocation, scaffold gap is present, inconsistency = 34043 57397913 57398516 518837 519440 NC_000014.9 velvet.61414 100.0 True relocation, scaffold gap is present, inconsistency = -14440 57384351 57388913 519715 524463 NC_000014.9 velvet.61414 99.89 True fake: scaffold gap size wrong estimation (local) 57389158 57397675 525343 533758 NC_000014.9 velvet.61414 98.64 True relocation, scaffold gap is present, inconsistency = 41352 57337109 57338079 544455 543485 NC_000014.9 velvet.61414 98.76 True local misassembly 57336142 57336842 545156 544456 NC_000014.9 velvet.61414 100.0 True relocation, scaffold gap is present, inconsistency = 67798 57407179 57413528 547695 554044 NC_000014.9 velvet.61414 99.94 True fake: scaffold gap size wrong estimation (local) 57413798 57416370 555165 557720 NC_000014.9 velvet.61414 99.34 True fake: scaffold gap size wrong estimation (local) 57416609 57425442 558623 568993 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 57425695 57426935 569809 571044 NC_000014.9 velvet.61414 99.59 True fake: scaffold gap size wrong estimation (local) 57427210 57433279 571839 577957 NC_000014.9 velvet.61414 99.15 True fake: scaffold gap size wrong estimation (local) 57433715 57434403 579690 580378 NC_000014.9 velvet.61414 99.56 True relocation, scaffold gap is present, inconsistency = 27007 57489347 57494448 613416 608315 NC_000014.9 velvet.61414 99.9 True fake: scaffold gap size wrong estimation (local) 57486475 57488586 617061 614950 NC_000014.9 velvet.61414 99.86 True relocation, scaffold gap is present, inconsistency = 46956 57435458 57438917 617663 621138 NC_000014.9 velvet.61414 97.54 True fake: scaffold gap size wrong estimation (local) 57439100 57442910 622124 625934 NC_000014.9 velvet.61414 100.0 True relocation, scaffold gap is present, inconsistency = 26274 57470608 57474974 631722 627358 NC_000014.9 velvet.61414 99.89 True fake: scaffold gap size wrong estimation (local) 57463660 57470485 639402 632579 NC_000014.9 velvet.61414 99.78 True fake: scaffold gap size wrong estimation (local) 57460990 57463371 642937 640559 NC_000014.9 velvet.61414 99.71 True fake: scaffold gap size wrong estimation (local) 57459693 57460706 644529 643516 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 57454776 57459438 650743 645350 NC_000014.9 velvet.61414 99.96 True fake: scaffold gap size wrong estimation (local) 57448999 57454449 657284 651791 NC_000014.9 velvet.61414 99.91 True fake: scaffold gap size wrong estimation (local) 57448423 57448961 658364 657826 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 57443574 57447034 664062 660234 NC_000014.9 velvet.61414 98.84 True relocation, scaffold gap is present, inconsistency = 46404 57494735 57498351 665359 668975 NC_000014.9 velvet.61414 99.89 True relocation, scaffold gap is present, inconsistency = -22274 57476092 57477741 668990 670610 NC_000014.9 velvet.61414 98.12 True fake: scaffold gap size wrong estimation (local) 57477983 57486485 671747 680249 NC_000014.9 velvet.61414 99.89 True relocation, scaffold gap is present, inconsistency = 8882851 66369347 66371267 680260 682171 NC_000014.9 velvet.61414 99.53 True inversion, scaffold gap is present 66338895 66343387 711753 707266 NC_000014.9 velvet.61414 99.89 True relocation, scaffold gap is present, inconsistency = -37791768 104124883 104127585 717533 714831 NC_000014.9 velvet.61414 99.85 True fake: scaffold gap size wrong estimation (local) 104115687 104122565 728206 721186 NC_000014.9 velvet.61414 99.91 True fake: scaffold gap size wrong estimation (local) 104098173 104115468 746848 729288 NC_000014.9 velvet.61414 99.86 True relocation, scaffold gap is present, inconsistency = 37745025 66347684 66353137 752312 746859 NC_000014.9 velvet.61414 99.98 True fake: scaffold gap size wrong estimation (local) 66345945 66347369 754872 753448 NC_000014.9 velvet.61414 99.3 True local misassembly 66344196 66345929 757420 755687 NC_000014.9 velvet.61414 99.42 True relocation, scaffold gap is present, inconsistency = -19751 66359656 66363936 761711 757431 NC_000014.9 velvet.61414 100.0 True relocation, scaffold gap is present, inconsistency = -37738164 104091063 104097809 768374 761722 NC_000014.9 velvet.61414 98.43 True relocation, scaffold gap is present, inconsistency = 9975295 94113461 94115757 770681 768385 NC_000014.9 velvet.61414 100.0 True relocation, scaffold gap is present, inconsistency = -9584 94118634 94122874 775092 770852 NC_000014.9 velvet.61414 99.95 True relocation, scaffold gap is present, inconsistency = -13073 94129653 94131696 777146 775103 NC_000014.9 velvet.61414 99.95 True relocation, scaffold gap is present, inconsistency = 76356 94049936 94053264 777179 780566 NC_000014.9 velvet.61414 99.88 True relocation, scaffold gap is present, inconsistency = 10027156 104080431 104084022 784168 780577 NC_000014.9 velvet.61414 99.94 True fake: scaffold gap size wrong estimation (local) 104076427 104076991 788992 788428 NC_000014.9 velvet.61414 98.23 True relocation, scaffold gap is present, inconsistency = 13097 104058859 104062525 793463 789797 NC_000014.9 velvet.61414 99.95 True relocation, scaffold gap is present, inconsistency = 9360070 94696589 94698778 793474 795663 NC_000014.9 velvet.61414 100.0 True relocation, scaffold gap is present, inconsistency = 9374737 104073526 104075066 797214 795674 NC_000014.9 velvet.61414 99.87 True relocation, scaffold gap is present, inconsistency = 37753502 66310528 66320013 806710 797225 NC_000014.9 velvet.61414 99.94 True relocation, scaffold gap is present, inconsistency = 46256655 20045768 20051553 809030 815493 NC_000014.9 velvet.61414 99.6 True fake: scaffold gap size wrong estimation (local) 20051907 20057129 816349 821571 NC_000014.9 velvet.61414 99.79 True relocation, scaffold gap is present, inconsistency = 66974795 87031935 87032934 821582 822581 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 87033223 87038766 823549 829092 NC_000014.9 velvet.61414 99.86 True relocation, scaffold gap is present, inconsistency = 7056513 94095290 94096355 830175 829103 NC_000014.9 velvet.61414 99.53 True relocation, scaffold gap is present, inconsistency = -9966342 104051629 104058571 840415 833236 NC_000014.9 velvet.61414 99.85 True relocation, scaffold gap is present, inconsistency = 9955448 94093401 94095235 843195 841361 NC_000014.9 velvet.61414 99.89 True fake: scaffold gap size wrong estimation (local) 94089481 94090160 844998 844319 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 94085278 94086357 846088 845009 NC_000014.9 velvet.61414 99.91 True fake: scaffold gap size wrong estimation (local) 94084643 94085277 847188 846554 NC_000014.9 velvet.61414 100.0 True inversion, scaffold gap is present 94083437 94084201 847199 847963 NC_000014.9 velvet.61414 99.87 True local misassembly 94082489 94083410 847974 848895 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 94086395 94087459 848906 849970 NC_000014.9 velvet.61414 99.81 True inversion, scaffold gap is present 94080725 94082454 851710 849981 NC_000014.9 velvet.61414 99.88 True fake: not a misassembly (possible transposable element) 94090281 94091714 851721 853154 NC_000014.9 velvet.61414 99.86 True fake: not a misassembly (possible transposable element) 94078198 94080687 855654 853165 NC_000014.9 velvet.61414 99.52 True fake: scaffold gap size wrong estimation (local) 94076682 94077853 858150 856979 NC_000014.9 velvet.61414 99.91 True relocation, scaffold gap is present, inconsistency = -36547 94109321 94113218 862058 858161 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 94108291 94109025 863796 863021 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 94107306 94107860 864747 864193 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 94096698 94107094 875970 865574 NC_000014.9 velvet.61414 99.87 True fake: scaffold gap size wrong estimation (extensive) 94087718 94089478 877689 875995 NC_000014.9 velvet.61414 96.12 True relocation, scaffold gap is present, inconsistency = -9963368 104049134 104051075 879641 877700 NC_000014.9 velvet.61414 99.9 True relocation, scaffold gap is present, inconsistency = 37714524 66330192 66333641 884059 880610 NC_000014.9 velvet.61414 99.97 True fake: scaffold gap size wrong estimation (local) 66327858 66329904 887162 885116 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 66321347 66327571 894412 888201 NC_000014.9 velvet.61414 99.76 True relocation, scaffold gap is present, inconsistency = 22591283 43705046 43713352 919469 911124 NC_000014.9 velvet.61414 99.39 True relocation, scaffold gap is present, inconsistency = -22599097 66302975 66304132 920637 919480 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 66300503 66301914 923990 922586 NC_000014.9 velvet.61414 99.5 True relocation, scaffold gap is present, inconsistency = 22625394 43673991 43675032 924067 925111 NC_000014.9 velvet.61414 99.43 True fake: scaffold gap size wrong estimation (local) 43676088 43683659 926655 934346 NC_000014.9 velvet.61414 98.62 True fake: scaffold gap size wrong estimation (local) 43683915 43696432 935379 949737 NC_000014.9 velvet.61414 99.98 True fake: scaffold gap size wrong estimation (local) 43696722 43698744 950806 952807 NC_000014.9 velvet.61414 98.76 True fake: scaffold gap size wrong estimation (local) 43713414 43722051 964260 972874 NC_000014.9 velvet.61414 99.72 True fake: scaffold gap size wrong estimation (local) 43722338 43726313 973596 978070 NC_000014.9 velvet.61414 99.97 True fake: scaffold gap size wrong estimation (local) 43726933 43728610 979518 981195 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 43728935 43736721 982171 991049 NC_000014.9 velvet.61414 99.93 True relocation, scaffold gap is present, inconsistency = 51351 43671739 43673904 996924 994729 NC_000014.9 velvet.61414 98.04 True indel: indel (> 5bp) 43667869 43671731 1001229 996989 NC_000014.9 velvet.61414 97.16 True fake: scaffold gap size wrong estimation (local) 43666703 43667631 1002644 1001716 NC_000014.9 velvet.61414 99.89 True fake: scaffold gap size wrong estimation (local) 43663763 43666681 1006220 1003298 NC_000014.9 velvet.61414 99.69 True fake: scaffold gap size wrong estimation (local) 43662969 43663482 1007441 1006928 NC_000014.9 velvet.61414 99.81 True fake: scaffold gap size wrong estimation (local) 43657183 43662916 1013627 1007894 NC_000014.9 velvet.61414 99.67 True fake: scaffold gap size wrong estimation (local) 43656307 43657051 1016747 1016005 NC_000014.9 velvet.61414 99.19 True fake: scaffold gap size wrong estimation (local) 43653926 43654589 1020224 1019561 NC_000014.9 velvet.61414 98.04 True fake: scaffold gap size wrong estimation (local) 43650849 43651911 1023324 1022262 NC_000014.9 velvet.61414 98.4 True fake: scaffold gap size wrong estimation (local) 43649705 43650848 1024510 1023367 NC_000014.9 velvet.61414 98.08 True fake: scaffold gap size wrong estimation (local) 43648886 43649487 1025616 1025015 NC_000014.9 velvet.61414 99.83 True fake: scaffold gap size wrong estimation (local) 43633081 43648135 1041995 1026933 NC_000014.9 velvet.61414 99.89 True fake: scaffold gap size wrong estimation (local) 43631276 43632762 1044399 1042913 NC_000014.9 velvet.61414 99.93 True fake: scaffold gap size wrong estimation (local) 43623674 43630701 1052621 1045528 NC_000014.9 velvet.61414 99.99 True fake: scaffold gap size wrong estimation (local) 43620894 43623521 1056163 1053536 NC_000014.9 velvet.61414 99.96 True fake: scaffold gap size wrong estimation (local) 43618956 43620603 1058919 1057272 NC_000014.9 velvet.61414 99.82 True indel: indel (<= 5bp) 43618422 43618954 1059452 1058920 NC_000014.9 velvet.61414 97.56 True fake: scaffold gap size wrong estimation (local) 43612278 43618126 1068386 1062538 NC_000014.9 velvet.61414 99.83 True fake: scaffold gap size wrong estimation (local) 43606493 43612277 1074251 1068467 NC_000014.9 velvet.61414 99.98 True fake: scaffold gap size wrong estimation (local) 43603376 43606324 1078071 1075123 NC_000014.9 velvet.61414 99.9 True fake: not a misassembly (possible transposable element) 43594234 43597951 1078082 1081799 NC_000014.9 velvet.61414 100.0 True fake: not a misassembly (possible transposable element) 43585310 43594181 1092378 1082773 NC_000014.9 velvet.61414 99.72 True fake: scaffold gap size wrong estimation (local) 43581345 43584997 1096973 1093460 NC_000014.9 velvet.61414 95.98 True relocation, scaffold gap is present, inconsistency = -48506818 92057497 92059542 1127565 1125594 NC_000014.9 velvet.61414 96.3 True relocation, scaffold gap is present, inconsistency = 24035024 68020333 68022462 1129704 1127576 NC_000014.9 velvet.61414 99.95 True fake: scaffold gap size wrong estimation (local) 68017975 68020155 1132961 1130781 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 68015726 68017235 1136076 1134567 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 68014854 68015598 1137076 1136298 NC_000014.9 velvet.61414 95.64 True fake: scaffold gap size wrong estimation (local) 68014203 68014831 1139232 1138604 NC_000014.9 velvet.61414 100.0 True relocation, scaffold gap is present, inconsistency = -24041958 92055130 92055705 1140263 1139688 NC_000014.9 velvet.61414 100.0 True relocation, scaffold gap is present, inconsistency = 48474038 43579006 43580566 1142342 1140789 NC_000014.9 velvet.61414 99.36 True fake: scaffold gap size wrong estimation (local) 43577497 43578752 1143925 1142670 NC_000014.9 velvet.61414 99.6 True fake: scaffold gap size wrong estimation (local) 43576861 43577496 1148976 1148341 NC_000014.9 velvet.61414 97.17 True local misassembly 43575946 43576544 1149575 1148977 NC_000014.9 velvet.61414 98.33 True indel: indel (> 5bp) 43574523 43575928 1150981 1149576 NC_000014.9 velvet.61414 99.93 True fake: scaffold gap size wrong estimation (local) 43571463 43574372 1155511 1152602 NC_000014.9 velvet.61414 99.97 True relocation, scaffold gap is present, inconsistency = 11742 43553077 43556111 1162155 1159121 NC_000014.9 velvet.61414 99.84 True relocation, scaffold gap is present, inconsistency = -24436285 67988395 67989351 1163122 1162166 NC_000014.9 velvet.61414 98.96 True fake: scaffold gap size wrong estimation (local) 67984210 67986760 1168131 1165329 NC_000014.9 velvet.61414 99.96 True fake: scaffold gap size wrong estimation (local) 67982197 67983908 1170567 1168796 NC_000014.9 velvet.61414 96.61 True fake: scaffold gap size wrong estimation (local) 67977033 67982005 1176779 1171743 NC_000014.9 velvet.61414 99.88 True relocation, scaffold gap is present, inconsistency = 24442466 43516639 43518132 1194704 1193214 NC_000014.9 velvet.61414 99.73 True fake: scaffold gap size wrong estimation (local) 43513801 43516490 1198317 1195619 NC_000014.9 velvet.61414 100.0 True relocation, scaffold gap is present, inconsistency = -24462040 67969196 67975830 1204962 1198328 NC_000014.9 velvet.61414 100.0 True fake: not a misassembly (possible transposable element) 99671819 99673492 1204973 1206646 NC_000014.9 velvet.61414 99.88 True fake: not a misassembly (possible transposable element) 67960946 67967318 1215432 1209119 NC_000014.9 velvet.61414 98.93 True fake: scaffold gap size wrong estimation (local) 67960070 67960822 1216762 1216010 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 67948939 67959251 1229718 1219237 NC_000014.9 velvet.61414 99.92 True fake: scaffold gap size wrong estimation (local) 67946640 67948648 1232383 1230375 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 67945742 67946352 1233941 1233331 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 67940351 67945526 1239831 1234080 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 67931762 67939976 1249326 1240951 NC_000014.9 velvet.61414 99.99 True fake: scaffold gap size wrong estimation (local) 67929899 67930911 1251773 1250761 NC_000014.9 velvet.61414 100.0 True fake: not a misassembly (possible transposable element) 99708616 99710610 1251784 1253778 NC_000014.9 velvet.61414 99.9 True fake: not a misassembly (possible transposable element) 67928358 67929758 1255179 1253779 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 67927708 67928315 1256166 1255559 NC_000014.9 velvet.61414 100.0 True relocation, scaffold gap is present, inconsistency = 14746 67905572 67906291 1262837 1263556 NC_000014.9 velvet.61414 98.61 True fake: scaffold gap size wrong estimation (local) 67907114 67908518 1265530 1266934 NC_000014.9 velvet.61414 100.0 True inversion, scaffold gap is present 67912978 67913640 1269455 1268793 NC_000014.9 velvet.61414 100.0 True relocation, scaffold gap is present, inconsistency = 103568 67806005 67809399 1269466 1272860 NC_000014.9 velvet.61414 99.91 True local misassembly 67811695 67814287 1272861 1275453 NC_000014.9 velvet.61414 99.92 True fake: scaffold gap size wrong estimation (local) 67814557 67817487 1276560 1279490 NC_000014.9 velvet.61414 99.97 True fake: scaffold gap size wrong estimation (local) 67823686 67824309 1280793 1281416 NC_000014.9 velvet.61414 100.0 True relocation, scaffold gap is present, inconsistency = -27360 67796960 67798149 1281427 1282616 NC_000014.9 velvet.61414 100.0 True relocation, scaffold gap is present, inconsistency = 95507 67893667 67894915 1283875 1282627 NC_000014.9 velvet.61414 99.92 True fake: scaffold gap size wrong estimation (local) 67890615 67893450 1287443 1284608 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 67889327 67890457 1289334 1288204 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 67883330 67888551 1296420 1290427 NC_000014.9 velvet.61414 99.94 True relocation, scaffold gap is present, inconsistency = 81710 67798181 67800950 1297090 1299859 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 67801267 67803392 1301022 1303147 NC_000014.9 velvet.61414 99.86 True fake: scaffold gap size wrong estimation (local) 67825117 67827475 1331865 1334217 NC_000014.9 velvet.61414 97.64 True fake: scaffold gap size wrong estimation (local) 67829563 67830440 1336962 1337839 NC_000014.9 velvet.61414 98.41 True fake: scaffold gap size wrong estimation (local) 67832483 67833120 1340719 1341356 NC_000014.9 velvet.61414 98.43 True fake: scaffold gap size wrong estimation (local) 67833376 67835697 1343499 1345808 NC_000014.9 velvet.61414 99.44 True fake: scaffold gap size wrong estimation (local) 67835718 67836503 1346674 1347451 NC_000014.9 velvet.61414 98.98 True fake: scaffold gap size wrong estimation (local) 67836765 67838585 1347611 1349431 NC_000014.9 velvet.61414 99.95 True fake: scaffold gap size wrong estimation (local) 67838837 67840819 1350154 1352186 NC_000014.9 velvet.61414 95.25 True relocation, scaffold gap is present, inconsistency = 35391 67879591 67882028 1355567 1358004 NC_000014.9 velvet.61414 99.96 True fake: scaffold gap size wrong estimation (local) 67882157 67882762 1358257 1358862 NC_000014.9 velvet.61414 99.83 True relocation, scaffold gap is present, inconsistency = 18753 67903132 67903995 1361342 1360479 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 67899321 67902867 1366413 1362250 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 67897920 67899064 1367981 1366837 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 67895047 67897634 1371521 1368945 NC_000014.9 velvet.61414 99.53 True fake: scaffold gap size wrong estimation (local) 67865812 67868061 1397514 1395265 NC_000014.9 velvet.61414 99.96 True fake: scaffold gap size wrong estimation (local) 67864142 67865223 1399867 1398798 NC_000014.9 velvet.61414 98.88 True fake: scaffold gap size wrong estimation (local) 67861578 67864030 1402908 1400417 NC_000014.9 velvet.61414 99.75 True fake: scaffold gap size wrong estimation (local) 67860081 67861354 1405213 1403899 NC_000014.9 velvet.61414 100.0 True fake: not a misassembly (possible transposable element) 67855552 67859871 1405224 1409615 NC_000014.9 velvet.61414 99.98 True fake: not a misassembly (possible transposable element) 67848289 67849349 1410683 1409626 NC_000014.9 velvet.61414 99.71 True fake: scaffold gap size wrong estimation (local) 67847423 67848051 1411494 1410866 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 67844827 67845382 1414805 1414250 NC_000014.9 velvet.61414 98.2 True local misassembly 67845636 67847295 1417077 1415418 NC_000014.9 velvet.61414 99.94 True fake: scaffold gap size wrong estimation (local) 67841829 67842521 1418442 1417762 NC_000014.9 velvet.61414 97.27 True relocation, scaffold gap is present, inconsistency = 50179 67788357 67791639 1421735 1418453 NC_000014.9 velvet.61414 99.91 True fake: scaffold gap size wrong estimation (local) 67787339 67788070 1423456 1422725 NC_000014.9 velvet.61414 99.86 True relocation, scaffold gap is present, inconsistency = -21605 67803613 67805744 1428787 1426656 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (extensive) 67794735 67796204 1430458 1428990 NC_000014.9 velvet.61414 99.66 True fake: scaffold gap size wrong estimation (local) 67793259 67794639 1432972 1431592 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 67792061 67792633 1434187 1433615 NC_000014.9 velvet.61414 99.83 True relocation, scaffold gap is present, inconsistency = 120569 67914344 67916402 1435329 1437387 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 67916521 67918225 1438133 1439837 NC_000014.9 velvet.61414 100.0 True relocation, scaffold gap is present, inconsistency = -9696 67908540 67909630 1439848 1440938 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (extensive) 67918535 67922560 1441329 1445434 NC_000014.9 velvet.61414 99.4 True fake: scaffold gap size wrong estimation (local) 67926840 67927683 1451571 1452414 NC_000014.9 velvet.61414 100.0 True relocation, scaffold gap is present, inconsistency = 169193 67751863 67757636 1458198 1452425 NC_000014.9 velvet.61414 99.97 True relocation, scaffold gap is present, inconsistency = -9824 67760687 67761676 1459198 1458209 NC_000014.9 velvet.61414 99.9 True fake: scaffold gap size wrong estimation (local) 67758006 67758623 1459826 1459209 NC_000014.9 velvet.61414 100.0 True relocation, scaffold gap is present, inconsistency = -8740 67763528 67766710 1463077 1459862 NC_000014.9 velvet.61414 98.94 True relocation, scaffold gap is present, inconsistency = -10731 67771325 67772834 1466011 1464502 NC_000014.9 velvet.61414 99.74 True fake: scaffold gap size wrong estimation (local) 67770466 67771212 1466913 1466169 NC_000014.9 velvet.61414 99.46 True fake: scaffold gap size wrong estimation (extensive) 67761776 67762923 1468071 1466924 NC_000014.9 velvet.61414 99.91 True fake: scaffold gap size wrong estimation (local) 67759623 67760594 1471049 1470078 NC_000014.9 velvet.61414 99.9 True relocation, scaffold gap is present, inconsistency = 134441 67623837 67625169 1471062 1472377 NC_000014.9 velvet.61414 98.72 True relocation, scaffold gap is present, inconsistency = 136041 67766920 67770272 1481439 1478087 NC_000014.9 velvet.61414 99.85 True relocation, scaffold gap is present, inconsistency = 29943341 97715408 97716831 1483234 1484657 NC_000014.9 velvet.61414 99.86 True relocation, scaffold gap is present, inconsistency = -30009076 67707852 67708595 1484754 1485497 NC_000014.9 velvet.61414 99.6 True inversion, scaffold gap is present 67743521 67744416 1517388 1516493 NC_000014.9 velvet.61414 98.88 True fake: scaffold gap size wrong estimation (local) 67740910 67742788 1520909 1519031 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 67737366 67740627 1525290 1521969 NC_000014.9 velvet.61414 99.78 True fake: not a misassembly (possible transposable element) 67658611 67661299 1526562 1529250 NC_000014.9 velvet.61414 100.0 True fake: not a misassembly (possible transposable element) 67733135 67737072 1533198 1529261 NC_000014.9 velvet.61414 99.97 True fake: scaffold gap size wrong estimation (local) 67727696 67728684 1534794 1533806 NC_000014.9 velvet.61414 99.9 True relocation, scaffold gap is present, inconsistency = 23784 67684674 67685678 1553028 1554032 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 67688075 67689691 1557176 1558791 NC_000014.9 velvet.61414 99.75 True fake: scaffold gap size wrong estimation (local) 67689944 67693526 1559850 1563432 NC_000014.9 velvet.61414 100.0 True fake: not a misassembly (possible transposable element) 67695964 67698968 1566447 1563443 NC_000014.9 velvet.61414 99.87 True fake: not a misassembly (possible transposable element) 67694714 67695983 1566448 1567717 NC_000014.9 velvet.61414 100.0 True fake: not a misassembly (possible transposable element) 67706719 67707428 1572071 1571387 NC_000014.9 velvet.61414 96.14 True fake: not a misassembly (possible transposable element) 67693942 67694446 1572082 1572586 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 67716914 67719513 1588271 1590870 NC_000014.9 velvet.61414 99.77 True fake: scaffold gap size wrong estimation (local) 67719631 67721758 1591762 1593888 NC_000014.9 velvet.61414 99.86 True relocation, scaffold gap is present, inconsistency = -10674 67711112 67711940 1593916 1594744 NC_000014.9 velvet.61414 99.88 True inversion, scaffold gap is present 67714601 67715921 1596543 1595223 NC_000014.9 velvet.61414 99.16 True fake: scaffold gap size wrong estimation (local) 67712669 67713238 1599443 1598874 NC_000014.9 velvet.61414 100.0 True inversion, scaffold gap is present 67721783 67723439 1603108 1604764 NC_000014.9 velvet.61414 100.0 True fake: scaffold gap size wrong estimation (local) 67723440 67724414 1605379 1606353 NC_000014.9 velvet.61414 95.59 True fake: scaffold gap size wrong estimation (local) 67724415 67727475 1606936 1609996 NC_000014.9 velvet.61414 99.58 True fake: scaffold gap size wrong estimation (local) 67728717 67730685 1613254 1615222 NC_000014.9 velvet.61414 99.9 True relocation, scaffold gap is present, inconsistency = -16031 67745440 67751495 1646008 1652130 NC_000014.9 velvet.61414 99.88 True CONTIG velvet.61414 1652296 misassembled 36302527 36306302 104 3879 NC_000014.9 velvet.61425 99.84 True fake: scaffold gap size wrong estimation (local) 36306573 36321148 4882 19678 NC_000014.9 velvet.61425 99.88 True fake: scaffold gap size wrong estimation (local) 36321249 36327179 20642 26575 NC_000014.9 velvet.61425 99.92 True fake: scaffold gap size wrong estimation (local) 36328061 36328835 28124 28898 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 36328932 36330981 29411 31460 NC_000014.9 velvet.61425 99.95 True fake: scaffold gap size wrong estimation (local) 36352540 36353042 49176 49678 NC_000014.9 velvet.61425 99.8 True fake: scaffold gap size wrong estimation (local) 36355020 36357312 52664 55057 NC_000014.9 velvet.61425 95.24 True relocation, scaffold gap is present, inconsistency = 16733580 53090903 53092009 55068 56174 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 53092833 53093920 57935 59022 NC_000014.9 velvet.61425 99.08 True relocation, scaffold gap is present, inconsistency = -13155 53080776 53082465 59033 60722 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 53083188 53084697 61980 63489 NC_000014.9 velvet.61425 99.93 True relocation, scaffold gap is present, inconsistency = -16730286 36358097 36364380 67175 74277 NC_000014.9 velvet.61425 95.27 True relocation, scaffold gap is present, inconsistency = 16730460 53094875 53106405 74312 86677 NC_000014.9 velvet.61425 99.98 True fake: scaffold gap size wrong estimation (local) 53106657 53107552 87435 88330 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 53108567 53109332 89657 90422 NC_000014.9 velvet.61425 99.87 True relocation, scaffold gap is present, inconsistency = 45292014 98401357 98403063 92115 90433 NC_000014.9 velvet.61425 98.41 True fake: scaffold gap size wrong estimation (local) 98398418 98399005 95692 95105 NC_000014.9 velvet.61425 99.83 True fake: scaffold gap size wrong estimation (local) 98391526 98398318 102897 95843 NC_000014.9 velvet.61425 99.88 True fake: scaffold gap size wrong estimation (local) 98384785 98390119 110459 105040 NC_000014.9 velvet.61425 99.94 True fake: scaffold gap size wrong estimation (local) 98369837 98374204 120106 115751 NC_000014.9 velvet.61425 99.66 True fake: scaffold gap size wrong estimation (local) 98361392 98369737 128677 120332 NC_000014.9 velvet.61425 99.88 True fake: scaffold gap size wrong estimation (local) 98359534 98361106 131213 129614 NC_000014.9 velvet.61425 99.93 True relocation, scaffold gap is present, inconsistency = 46836 98407953 98424577 131224 147974 NC_000014.9 velvet.61425 99.8 True fake: not a misassembly (possible transposable element) 63227223 63230836 151690 147985 NC_000014.9 velvet.61425 99.86 True fake: not a misassembly (possible transposable element) 98424833 98430692 151701 157561 NC_000014.9 velvet.61425 99.86 True relocation, scaffold gap is present, inconsistency = 35199805 63222874 63224944 159716 157645 NC_000014.9 velvet.61425 99.9 True fake: scaffold gap size wrong estimation (local) 63219818 63221829 163723 161630 NC_000014.9 velvet.61425 99.74 True relocation, scaffold gap is present, inconsistency = -16969 63232826 63236308 168094 164202 NC_000014.9 velvet.61425 99.94 True fake: scaffold gap size wrong estimation (local) 63231148 63232679 170471 168940 NC_000014.9 velvet.61425 99.93 True fake: scaffold gap size wrong estimation (local) 63225203 63226984 172242 170482 NC_000014.9 velvet.61425 98.59 True fake: scaffold gap size wrong estimation (local) 63217744 63219533 182168 180379 NC_000014.9 velvet.61425 99.89 True fake: scaffold gap size wrong estimation (local) 63210231 63217058 190685 183319 NC_000014.9 velvet.61425 99.79 True fake: scaffold gap size wrong estimation (local) 63207304 63209944 194412 191772 NC_000014.9 velvet.61425 99.92 True fake: scaffold gap size wrong estimation (local) 63203394 63207013 199051 195432 NC_000014.9 velvet.61425 99.89 True relocation, scaffold gap is present, inconsistency = -35141299 98343906 98344682 199838 199062 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 98330900 98336003 206679 200809 NC_000014.9 velvet.61425 99.86 True relocation, scaffold gap is present, inconsistency = 67989002 30337177 30340211 208366 211363 NC_000014.9 velvet.61425 98.75 True fake: scaffold gap size wrong estimation (local) 30340461 30341992 212528 214059 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 30342239 30343927 214357 216152 NC_000014.9 velvet.61425 96.15 True fake: scaffold gap size wrong estimation (local) 30344157 30352454 216684 225957 NC_000014.9 velvet.61425 99.99 True relocation, scaffold gap is present, inconsistency = 32837913 63199533 63203373 238968 235123 NC_000014.9 velvet.61425 98.35 True fake: scaffold gap size wrong estimation (local) 63198855 63199418 240534 239971 NC_000014.9 velvet.61425 99.65 True relocation, scaffold gap is present, inconsistency = 32823785 30369699 30374874 240730 245905 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 30375045 30376928 246934 248817 NC_000014.9 velvet.61425 99.95 True fake: scaffold gap size wrong estimation (local) 30399801 30404547 273064 277810 NC_000014.9 velvet.61425 99.94 True relocation, scaffold gap is present, inconsistency = 9751 30417837 30428414 292202 281349 NC_000014.9 velvet.61425 99.88 True fake: scaffold gap size wrong estimation (local) 30417006 30417746 293089 292349 NC_000014.9 velvet.61425 99.87 True fake: scaffold gap size wrong estimation (local) 30413905 30416456 296923 294372 NC_000014.9 velvet.61425 100.0 True inversion, scaffold gap is present 30429802 30430541 315966 316705 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 30430760 30434468 317752 321543 NC_000014.9 velvet.61425 99.81 True fake: scaffold gap size wrong estimation (local) 30434782 30435906 322479 323603 NC_000014.9 velvet.61425 99.91 True fake: scaffold gap size wrong estimation (local) 30436187 30437621 324211 325645 NC_000014.9 velvet.61425 99.93 True fake: not a misassembly (possible transposable element) 24220627 24221300 325656 326329 NC_000014.9 velvet.61425 100.0 True fake: not a misassembly (possible transposable element) 30437734 30446512 329512 338360 NC_000014.9 velvet.61425 99.83 True fake: scaffold gap size wrong estimation (local) 30446745 30451740 339340 344335 NC_000014.9 velvet.61425 99.9 True fake: scaffold gap size wrong estimation (local) 30452093 30459233 345460 352647 NC_000014.9 velvet.61425 97.05 True fake: scaffold gap size wrong estimation (local) 30459307 30461459 352865 355580 NC_000014.9 velvet.61425 99.86 True relocation, scaffold gap is present, inconsistency = 34899114 65363523 65364182 359189 358530 NC_000014.9 velvet.61425 98.48 True local misassembly 65361814 65362679 360055 359190 NC_000014.9 velvet.61425 99.88 True fake: scaffold gap size wrong estimation (local) 65360104 65361074 363092 362122 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 65338028 65339076 382497 381449 NC_000014.9 velvet.61425 95.52 True local misassembly 65337272 65337790 383016 382498 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 65331837 65337258 389655 383639 NC_000014.9 velvet.61425 99.89 True relocation, scaffold gap is present, inconsistency = 1367666 66707422 66711253 392153 395904 NC_000014.9 velvet.61425 97.87 True relocation, scaffold gap is present, inconsistency = -17274891 49436373 49442524 395915 402065 NC_000014.9 velvet.61425 99.85 True fake: scaffold gap size wrong estimation (extensive) 49456435 49459026 425210 427801 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 49459117 49463147 427986 432011 NC_000014.9 velvet.61425 99.85 True inversion, scaffold gap is present 49455384 49456124 432762 432022 NC_000014.9 velvet.61425 99.87 True relocation, scaffold gap is present, inconsistency = 15159 49471294 49480038 432773 443118 NC_000014.9 velvet.61425 99.83 True relocation, scaffold gap is present, inconsistency = 33281399 82761448 82763021 444702 443129 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 82760541 82761162 445817 445155 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 82756587 82760157 450405 446835 NC_000014.9 velvet.61425 99.89 True fake: scaffold gap size wrong estimation (local) 82747466 82753778 456705 450416 NC_000014.9 velvet.61425 99.4 True relocation, scaffold gap is present, inconsistency = 33209835 49532689 49533755 461647 460581 NC_000014.9 velvet.61425 100.0 True relocation, scaffold gap is present, inconsistency = -33223929 82754107 82756331 464158 461934 NC_000014.9 velvet.61425 99.91 True relocation, scaffold gap is present, inconsistency = 59529613 23223631 23224205 465021 464447 NC_000014.9 velvet.61425 99.48 True relocation, scaffold gap is present, inconsistency = -26307113 49529962 49530533 465803 465232 NC_000014.9 velvet.61425 98.78 True fake: scaffold gap size wrong estimation (local) 49527144 49528677 469533 468000 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 49525248 49526613 472382 471017 NC_000014.9 velvet.61425 99.85 True fake: scaffold gap size wrong estimation (local) 49517547 49524166 481742 474270 NC_000014.9 velvet.61425 99.66 True fake: scaffold gap size wrong estimation (local) 49514116 49517278 485746 482584 NC_000014.9 velvet.61425 99.94 True fake: scaffold gap size wrong estimation (local) 49513290 49513942 487286 486634 NC_000014.9 velvet.61425 99.85 True fake: scaffold gap size wrong estimation (local) 49512061 49513051 488481 487491 NC_000014.9 velvet.61425 100.0 True fake: not a misassembly (possible transposable element) 49509758 49511090 488575 489883 NC_000014.9 velvet.61425 97.95 True fake: not a misassembly (possible transposable element) 49511122 49511786 490558 489894 NC_000014.9 velvet.61425 99.85 True relocation, scaffold gap is present, inconsistency = 20018 49490319 49491093 490569 491343 NC_000014.9 velvet.61425 99.87 True relocation, scaffold gap is present, inconsistency = -100696 49391924 49392787 492870 493727 NC_000014.9 velvet.61425 99.3 True fake: scaffold gap size wrong estimation (local) 49396443 49397272 498401 499224 NC_000014.9 velvet.61425 98.8 True relocation, scaffold gap is present, inconsistency = 25269702 74666985 74668906 501156 499235 NC_000014.9 velvet.61425 100.0 True relocation, scaffold gap is present, inconsistency = 9334266 65329327 65331240 504548 502635 NC_000014.9 velvet.61425 99.79 True fake: scaffold gap size wrong estimation (local) 65325675 65326552 508444 507567 NC_000014.9 velvet.61425 99.54 True relocation, scaffold gap is present, inconsistency = 24173601 41148935 41150323 511583 510195 NC_000014.9 velvet.61425 99.28 True fake: scaffold gap size wrong estimation (local) 41142719 41148654 518476 512541 NC_000014.9 velvet.61425 99.95 True relocation, scaffold gap is present, inconsistency = 3787260 44935925 44937163 518487 519725 NC_000014.9 velvet.61425 100.0 True relocation, scaffold gap is present, inconsistency = 31946930 76884519 76889351 520151 524977 NC_000014.9 velvet.61425 99.73 True relocation, scaffold gap is present, inconsistency = -12611 76876751 76877414 524988 525649 NC_000014.9 velvet.61425 99.7 True fake: scaffold gap size wrong estimation (local) 76877599 76878280 525790 526471 NC_000014.9 velvet.61425 100.0 True fake: not a misassembly (possible transposable element) 76890028 76890810 526588 527370 NC_000014.9 velvet.61425 100.0 True fake: not a misassembly (possible transposable element) 76878675 76879174 529146 529645 NC_000014.9 velvet.61425 100.0 True local misassembly 76879393 76880263 529735 530605 NC_000014.9 velvet.61425 98.74 True indel: indel (<= 5bp) 76880306 76880935 530645 531274 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 76881200 76884156 532431 535387 NC_000014.9 velvet.61425 99.8 True relocation, scaffold gap is present, inconsistency = 14825 76916948 76921064 553354 557470 NC_000014.9 velvet.61425 99.88 True fake: scaffold gap size wrong estimation (local) 76923903 76925581 557662 559340 NC_000014.9 velvet.61425 99.88 True local misassembly 76921255 76923881 559363 561989 NC_000014.9 velvet.61425 96.26 True fake: scaffold gap size wrong estimation (local) 76927878 76929518 562000 563640 NC_000014.9 velvet.61425 100.0 True local misassembly 76926823 76927684 563651 564512 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 76929803 76930379 566960 567536 NC_000014.9 velvet.61425 100.0 True relocation, scaffold gap is present, inconsistency = 2294198 74634180 74635594 569013 567547 NC_000014.9 velvet.61425 99.93 True fake: scaffold gap size wrong estimation (local) 74633322 74633935 570244 569631 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 74627646 74629493 572429 570582 NC_000014.9 velvet.61425 99.89 True fake: scaffold gap size wrong estimation (local) 74625850 74626554 574822 574118 NC_000014.9 velvet.61425 99.72 True fake: scaffold gap size wrong estimation (local) 74617867 74622449 579415 574833 NC_000014.9 velvet.61425 99.91 True relocation, scaffold gap is present, inconsistency = -7321 74623559 74625177 581041 579426 NC_000014.9 velvet.61425 99.81 True fake: scaffold gap size wrong estimation (local) 74613216 74617806 586368 581778 NC_000014.9 velvet.61425 100.0 True relocation, scaffold gap is present, inconsistency = 664851 75284047 75284777 587758 588529 NC_000014.9 velvet.61425 99.85 True relocation, scaffold gap is present, inconsistency = 10383525 64899417 64900511 589634 588540 NC_000014.9 velvet.61425 99.82 True fake: scaffold gap size wrong estimation (local) 64867877 64869007 617587 616457 NC_000014.9 velvet.61425 99.91 True relocation, scaffold gap is present, inconsistency = 10441029 75310047 75311932 617598 619537 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 75312204 75312743 620579 621118 NC_000014.9 velvet.61425 100.0 True local misassembly 75312985 75313604 621119 621738 NC_000014.9 velvet.61425 98.23 True fake: scaffold gap size wrong estimation (local) 75313842 75314825 622270 623253 NC_000014.9 velvet.61425 100.0 True relocation, scaffold gap is present, inconsistency = 672296 74639872 74641239 624927 623560 NC_000014.9 velvet.61425 99.93 True fake: scaffold gap size wrong estimation (local) 74635939 74639655 629475 625759 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 74631611 74632687 630562 629486 NC_000014.9 velvet.61425 100.0 True relocation, scaffold gap is present, inconsistency = 84472 74720146 74720893 633549 634296 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 74722982 74723591 637069 637678 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 74741038 74741559 652270 652791 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 74742778 74743879 654127 655220 NC_000014.9 velvet.61425 99.18 True fake: scaffold gap size wrong estimation (local) 74751740 74752254 661307 661821 NC_000014.9 velvet.61425 98.45 True local misassembly 74746878 74748157 662814 664093 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 74753456 74754969 664104 665615 NC_000014.9 velvet.61425 99.87 True fake: scaffold gap size wrong estimation (local) 74757459 74758420 668592 669553 NC_000014.9 velvet.61425 98.54 True relocation, scaffold gap is present, inconsistency = -22339 74736440 74737125 669912 670597 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 74738129 74738848 672566 673285 NC_000014.9 velvet.61425 100.0 True local misassembly 74739298 74740058 673286 674046 NC_000014.9 velvet.61425 98.69 True fake: scaffold gap size wrong estimation (local) 74770659 74772232 701514 703087 NC_000014.9 velvet.61425 99.94 True fake: scaffold gap size wrong estimation (local) 74774847 74777310 706111 708507 NC_000014.9 velvet.61425 97.27 True fake: scaffold gap size wrong estimation (local) 74777913 74778910 709974 710971 NC_000014.9 velvet.61425 98.9 True fake: scaffold gap size wrong estimation (local) 74779146 74779656 711158 711668 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 74780104 74783296 713049 716241 NC_000014.9 velvet.61425 99.97 True relocation, scaffold gap is present, inconsistency = -24392 74759675 74760983 717012 718320 NC_000014.9 velvet.61425 99.92 True fake: scaffold gap size wrong estimation (local) 74762491 74763519 720599 721627 NC_000014.9 velvet.61425 98.93 True fake: scaffold gap size wrong estimation (local) 74767187 74768408 722633 723901 NC_000014.9 velvet.61425 99.75 True fake: scaffold gap size wrong estimation (extensive) 74783389 74786114 747814 750539 NC_000014.9 velvet.61425 99.89 True fake: scaffold gap size wrong estimation (local) 74786393 74787311 751492 752410 NC_000014.9 velvet.61425 99.89 True fake: scaffold gap size wrong estimation (local) 74788423 74789271 753794 754636 NC_000014.9 velvet.61425 98.82 True fake: scaffold gap size wrong estimation (local) 74789955 74794336 755978 760381 NC_000014.9 velvet.61425 99.09 True fake: scaffold gap size wrong estimation (local) 74794482 74796996 761309 763972 NC_000014.9 velvet.61425 99.96 True fake: scaffold gap size wrong estimation (local) 74797260 74801962 764978 769680 NC_000014.9 velvet.61425 99.96 True fake: scaffold gap size wrong estimation (local) 74802250 74803006 770530 771286 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 74803130 74803900 771677 772447 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 74804176 74805034 772763 773621 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 74806836 74808547 776207 777845 NC_000014.9 velvet.61425 95.53 True fake: scaffold gap size wrong estimation (local) 74808826 74810880 779082 781136 NC_000014.9 velvet.61425 99.95 True fake: scaffold gap size wrong estimation (local) 74811515 74814108 782681 785274 NC_000014.9 velvet.61425 99.92 True fake: scaffold gap size wrong estimation (local) 74814361 74815312 786118 787069 NC_000014.9 velvet.61425 99.89 True fake: scaffold gap size wrong estimation (local) 74815594 74817807 787635 790281 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 74817980 74819290 791359 792665 NC_000014.9 velvet.61425 99.69 True fake: scaffold gap size wrong estimation (local) 74819572 74820380 792882 793690 NC_000014.9 velvet.61425 99.63 True fake: scaffold gap size wrong estimation (local) 74820546 74832507 794615 806642 NC_000014.9 velvet.61425 99.88 True fake: scaffold gap size wrong estimation (local) 74850771 74851469 819252 819950 NC_000014.9 velvet.61425 100.0 True local misassembly 74849343 74850408 821300 822365 NC_000014.9 velvet.61425 99.91 True fake: scaffold gap size wrong estimation (local) 74866258 74868132 834900 836774 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 74869567 74870176 838981 839590 NC_000014.9 velvet.61425 98.36 True inversion, scaffold gap is present 74877403 74878243 843858 843018 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 74873231 74874238 848429 847422 NC_000014.9 velvet.61425 100.0 True fake: scaffold gap size wrong estimation (local) 74871565 74872988 851111 849689 NC_000014.9 velvet.61425 99.93 True inversion, scaffold gap is present 74880779 74881443 852470 853134 NC_000014.9 velvet.61425 98.95 True local misassembly 74881444 74883042 853834 855432 NC_000014.9 velvet.61425 99.37 True relocation, scaffold gap is present, inconsistency = -7888 74875165 74876871 855443 857149 NC_000014.9 velvet.61425 100.0 True CONTIG velvet.61425 857217 misassembled 40900915 40903339 1 2404 NC_000014.9 velvet.61433 99.01 True fake: scaffold gap size wrong estimation (local) 40903551 40907733 3405 8053 NC_000014.9 velvet.61433 99.95 True fake: scaffold gap size wrong estimation (local) 40908043 40910693 8999 11649 NC_000014.9 velvet.61433 99.96 True fake: scaffold gap size wrong estimation (local) 40910993 40921520 12732 24008 NC_000014.9 velvet.61433 99.25 True fake: scaffold gap size wrong estimation (local) 40921746 40922953 24970 26177 NC_000014.9 velvet.61433 99.92 True fake: scaffold gap size wrong estimation (local) 40954935 40955921 55536 56523 NC_000014.9 velvet.61433 100.0 True fake: scaffold gap size wrong estimation (local) 40956351 40958633 57798 60080 NC_000014.9 velvet.61433 99.91 True fake: scaffold gap size wrong estimation (local) 40959042 40960335 60495 62388 NC_000014.9 velvet.61433 99.06 True fake: scaffold gap size wrong estimation (local) 40960521 40964318 62656 66494 NC_000014.9 velvet.61433 98.83 True fake: scaffold gap size wrong estimation (local) 40964414 40965213 67340 68139 NC_000014.9 velvet.61433 100.0 True fake: scaffold gap size wrong estimation (local) 40965345 40966992 68422 70069 NC_000014.9 velvet.61433 99.88 True fake: scaffold gap size wrong estimation (local) 40967231 40974718 71055 78764 NC_000014.9 velvet.61433 99.85 True fake: scaffold gap size wrong estimation (local) 40975011 40978861 79794 83671 NC_000014.9 velvet.61433 99.07 True fake: scaffold gap size wrong estimation (local) 40979002 40986283 84396 92508 NC_000014.9 velvet.61433 99.52 True fake: scaffold gap size wrong estimation (local) 40995940 41001390 96439 102017 NC_000014.9 velvet.61433 99.78 True fake: scaffold gap size wrong estimation (local) 41001708 41002643 102934 103869 NC_000014.9 velvet.61433 99.89 True fake: scaffold gap size wrong estimation (local) 41003294 41009746 104722 112747 NC_000014.9 velvet.61433 96.2 True fake: scaffold gap size wrong estimation (local) 41009830 41014917 113119 119372 NC_000014.9 velvet.61433 99.88 True fake: scaffold gap size wrong estimation (local) 41016068 41024481 121343 130736 NC_000014.9 velvet.61433 99.69 True fake: scaffold gap size wrong estimation (local) 41025631 41027411 132623 134403 NC_000014.9 velvet.61433 99.89 True fake: scaffold gap size wrong estimation (local) 41027412 41030152 135398 138138 NC_000014.9 velvet.61433 98.69 True fake: scaffold gap size wrong estimation (local) 41030253 41031945 138938 140642 NC_000014.9 velvet.61433 97.14 True fake: scaffold gap size wrong estimation (local) 41032506 41033115 141627 142236 NC_000014.9 velvet.61433 99.51 True fake: scaffold gap size wrong estimation (local) 41033594 41035277 143419 145102 NC_000014.9 velvet.61433 99.58 True fake: scaffold gap size wrong estimation (local) 41035470 41038490 145919 149290 NC_000014.9 velvet.61433 99.87 True fake: scaffold gap size wrong estimation (local) 41038621 41040935 149973 152348 NC_000014.9 velvet.61433 99.91 True fake: scaffold gap size wrong estimation (local) 41042442 41043019 154596 155173 NC_000014.9 velvet.61433 100.0 True fake: scaffold gap size wrong estimation (local) 41044414 41049374 157296 162446 NC_000014.9 velvet.61433 98.3 True fake: scaffold gap size wrong estimation (local) 41049683 41051818 163902 166035 NC_000014.9 velvet.61433 99.53 True fake: scaffold gap size wrong estimation (local) 41052042 41062368 167074 178583 NC_000014.9 velvet.61433 99.4 True fake: scaffold gap size wrong estimation (local) 41062504 41063903 179572 180971 NC_000014.9 velvet.61433 99.57 True fake: scaffold gap size wrong estimation (local) 41065141 41088294 182993 208371 NC_000014.9 velvet.61433 99.46 True fake: scaffold gap size wrong estimation (local) 41089539 41093118 210475 214142 NC_000014.9 velvet.61433 99.77 True fake: scaffold gap size wrong estimation (local) 41093305 41100136 215078 221910 NC_000014.9 velvet.61433 99.56 True fake: scaffold gap size wrong estimation (local) 41100279 41110506 222065 232778 NC_000014.9 velvet.61433 96.77 True fake: scaffold gap size wrong estimation (local) 41110811 41115708 233869 238757 NC_000014.9 velvet.61433 99.1 True fake: scaffold gap size wrong estimation (local) 41116196 41119796 240029 243640 NC_000014.9 velvet.61433 98.1 True fake: scaffold gap size wrong estimation (local) 41126772 41128567 248115 250011 NC_000014.9 velvet.61433 99.77 True fake: scaffold gap size wrong estimation (local) 41129396 41130963 251655 253208 NC_000014.9 velvet.61433 98.41 True fake: scaffold gap size wrong estimation (local) 41131226 41132392 253971 255140 NC_000014.9 velvet.61433 98.55 True fake: scaffold gap size wrong estimation (local) 41132542 41133946 255587 256947 NC_000014.9 velvet.61433 95.11 True fake: scaffold gap size wrong estimation (local) 41134796 41139603 258453 263996 NC_000014.9 velvet.61433 99.69 True fake: scaffold gap size wrong estimation (local) 41166020 41169217 290190 293457 NC_000014.9 velvet.61433 97.19 True relocation, scaffold gap is present, inconsistency = -19556 41151078 41153423 294874 297219 NC_000014.9 velvet.61433 99.87 True local misassembly 41156320 41159402 297220 300302 NC_000014.9 velvet.61433 99.58 True fake: scaffold gap size wrong estimation (local) 41160263 41165918 301897 307518 NC_000014.9 velvet.61433 99.31 True fake: scaffold gap size wrong estimation (local) 41197386 41198576 336466 337656 NC_000014.9 velvet.61433 100.0 True fake: scaffold gap size wrong estimation (local) 41198663 41208287 338065 348779 NC_000014.9 velvet.61433 99.93 True fake: scaffold gap size wrong estimation (local) 41215341 41216280 353319 354258 NC_000014.9 velvet.61433 100.0 True fake: scaffold gap size wrong estimation (local) 41216509 41218444 355516 357451 NC_000014.9 velvet.61433 100.0 True fake: scaffold gap size wrong estimation (local) 41219761 41224731 359819 364787 NC_000014.9 velvet.61433 99.86 True relocation, scaffold gap is present, inconsistency = 30206 41265107 41266106 375956 374957 NC_000014.9 velvet.61433 99.7 True CONTIG velvet.61433 376044 misassembled 101679733 101680241 3243 3751 NC_000014.9 velvet.61435 99.8 True fake: scaffold gap size wrong estimation (local) 101681590 101682308 7157 7875 NC_000014.9 velvet.61435 100.0 True relocation, scaffold gap is present, inconsistency = -28692810 72994354 72995092 12731 13469 NC_000014.9 velvet.61435 100.0 True fake: scaffold gap size wrong estimation (local) 72995501 72996487 13634 14620 NC_000014.9 velvet.61435 99.9 True inversion, scaffold gap is present 72996532 72998302 16401 14631 NC_000014.9 velvet.61435 99.89 True relocation, scaffold gap is present, inconsistency = 28691826 101690916 101692243 17189 18516 NC_000014.9 velvet.61435 100.0 True fake: not a misassembly (possible transposable element) 73000511 73001724 18960 20173 NC_000014.9 velvet.61435 100.0 True fake: not a misassembly (possible transposable element) 101694647 101695553 21599 22505 NC_000014.9 velvet.61435 98.9 True fake: not a misassembly (possible transposable element) 73001940 73002476 22516 23052 NC_000014.9 velvet.61435 100.0 True fake: not a misassembly (possible transposable element) 101713753 101718617 36706 42410 NC_000014.9 velvet.61435 99.56 True fake: scaffold gap size wrong estimation (local) 101721516 101722822 45746 47049 NC_000014.9 velvet.61435 99.77 True fake: not a misassembly (possible transposable element) 101725880 101728095 52689 50342 NC_000014.9 velvet.61435 96.13 True fake: not a misassembly (possible transposable element) 101730304 101730994 56452 57135 NC_000014.9 velvet.61435 98.41 True fake: scaffold gap size wrong estimation (local) 101731155 101732872 57813 59530 NC_000014.9 velvet.61435 99.88 True fake: scaffold gap size wrong estimation (local) 101733056 101734937 60692 62631 NC_000014.9 velvet.61435 96.91 True relocation, scaffold gap is present, inconsistency = -72227743 29507282 29508424 62719 63862 NC_000014.9 velvet.61435 99.65 True fake: scaffold gap size wrong estimation (local) 29508672 29511584 64854 67766 NC_000014.9 velvet.61435 99.93 True fake: scaffold gap size wrong estimation (local) 29513002 29513887 70106 70991 NC_000014.9 velvet.61435 98.19 True relocation, scaffold gap is present, inconsistency = 72287642 101802392 101802943 72405 71854 NC_000014.9 velvet.61435 98.19 True local misassembly 101801161 101802135 73380 72406 NC_000014.9 velvet.61435 99.79 True relocation, inconsistency = 72285511 29514247 29515640 73390 74824 NC_000014.9 velvet.61435 96.93 True fake: scaffold gap size wrong estimation (local) 29515715 29516314 75349 75948 NC_000014.9 velvet.61435 100.0 True relocation, scaffold gap is present, inconsistency = 72279752 101796078 101800279 80158 75960 NC_000014.9 velvet.61435 99.93 True fake: scaffold gap size wrong estimation (local) 101793151 101795848 83759 81123 NC_000014.9 velvet.61435 97.73 True fake: scaffold gap size wrong estimation (local) 101791112 101792866 86844 85084 NC_000014.9 velvet.61435 100.0 True relocation, scaffold gap is present, inconsistency = 33804 101753665 101757297 86855 90487 NC_000014.9 velvet.61435 100.0 True fake: scaffold gap size wrong estimation (local) 101757980 101760758 92160 94938 NC_000014.9 velvet.61435 98.38 True local misassembly 101763585 101764801 94939 96155 NC_000014.9 velvet.61435 99.1 True indel: indel (<= 5bp) 101764803 101765582 96156 96935 NC_000014.9 velvet.61435 100.0 True fake: not a misassembly (possible transposable element) 101761954 101763241 99485 98198 NC_000014.9 velvet.61435 100.0 True fake: not a misassembly (possible transposable element) 101765881 101768841 99496 102455 NC_000014.9 velvet.61435 99.97 True fake: scaffold gap size wrong estimation (local) 101769126 101771246 103541 105661 NC_000014.9 velvet.61435 99.95 True fake: scaffold gap size wrong estimation (local) 101773822 101774863 106302 107343 NC_000014.9 velvet.61435 99.81 True local misassembly 101771740 101772541 107354 108155 NC_000014.9 velvet.61435 100.0 True local misassembly 101772774 101773736 108156 109118 NC_000014.9 velvet.61435 98.96 True relocation, scaffold gap is present, inconsistency = 50626961 51144298 51145802 110633 109129 NC_000014.9 velvet.61435 100.0 True fake: scaffold gap size wrong estimation (local) 51141972 51144076 113554 111450 NC_000014.9 velvet.61435 100.0 True relocation, scaffold gap is present, inconsistency = -50658549 101790198 101790797 123877 123278 NC_000014.9 velvet.61435 99.33 True fake: scaffold gap size wrong estimation (local) 101787770 101789684 126268 124354 NC_000014.9 velvet.61435 100.0 True fake: scaffold gap size wrong estimation (local) 101784573 101787479 130343 127043 NC_000014.9 velvet.61435 99.55 True fake: scaffold gap size wrong estimation (local) 101782549 101784347 133093 131295 NC_000014.9 velvet.61435 100.0 True fake: scaffold gap size wrong estimation (local) 101778946 101782185 137545 134306 NC_000014.9 velvet.61435 100.0 True fake: scaffold gap size wrong estimation (local) 101778005 101778871 138572 137706 NC_000014.9 velvet.61435 98.85 True fake: not a misassembly (possible transposable element) 51111733 51113872 141546 139407 NC_000014.9 velvet.61435 99.91 True fake: not a misassembly (possible transposable element) 101774836 101776749 143591 141678 NC_000014.9 velvet.61435 100.0 True relocation, scaffold gap is present, inconsistency = 50663368 51110382 51111303 144677 143756 NC_000014.9 velvet.61435 100.0 True fake: scaffold gap size wrong estimation (local) 51108904 51110093 146381 145192 NC_000014.9 velvet.61435 99.92 True fake: scaffold gap size wrong estimation (local) 51104296 51105268 147367 146395 NC_000014.9 velvet.61435 100.0 True local misassembly 51106507 51108825 149696 147378 NC_000014.9 velvet.61435 99.91 True fake: scaffold gap size wrong estimation (local) 51099240 51104005 155273 149707 NC_000014.9 velvet.61435 99.94 True relocation, scaffold gap is present, inconsistency = 31237388 19856423 19861525 155600 161527 NC_000014.9 velvet.61435 99.62 True fake: scaffold gap size wrong estimation (local) 19862208 19865789 163051 166632 NC_000014.9 velvet.61435 99.97 True fake: scaffold gap size wrong estimation (local) 19867283 19869759 168853 171329 NC_000014.9 velvet.61435 100.0 True fake: scaffold gap size wrong estimation (local) 19870029 19871661 172441 174073 NC_000014.9 velvet.61435 100.0 True relocation, scaffold gap is present, inconsistency = 81931350 101806555 101815734 177617 186882 NC_000014.9 velvet.61435 98.96 True fake: not a misassembly (possible transposable element) 101887008 101888579 207469 205898 NC_000014.9 velvet.61435 100.0 True fake: not a misassembly (possible transposable element) 101843046 101847682 211639 216759 NC_000014.9 velvet.61435 99.98 True relocation, scaffold gap is present, inconsistency = 23814 101871512 101872213 217476 216775 NC_000014.9 velvet.61435 100.0 True fake: scaffold gap size wrong estimation (local) 101867739 101869699 222045 220085 NC_000014.9 velvet.61435 99.95 True local misassembly 101869879 101871220 223445 222056 NC_000014.9 velvet.61435 100.0 True relocation, scaffold gap is present, inconsistency = 50798732 51070519 51071136 224073 223456 NC_000014.9 velvet.61435 100.0 True relocation, scaffold gap is present, inconsistency = -9911 51077657 51080419 226846 224084 NC_000014.9 velvet.61435 99.96 True relocation, scaffold gap is present, inconsistency = -50786201 101860326 101862808 230377 227896 NC_000014.9 velvet.61435 99.84 True relocation, scaffold gap is present, inconsistency = -8227 101863844 101865911 235086 233019 NC_000014.9 velvet.61435 100.0 True relocation, scaffold gap is present, inconsistency = 50790181 51071798 51072665 236084 236951 NC_000014.9 velvet.61435 100.0 True relocation, scaffold gap is present, inconsistency = -31199946 19872730 19873615 236962 237847 NC_000014.9 velvet.61435 100.0 True relocation, scaffold gap is present, inconsistency = 32262460 52142018 52144417 246104 243790 NC_000014.9 velvet.61435 96.23 True fake: scaffold gap size wrong estimation (local) 52140638 52141724 248343 247257 NC_000014.9 velvet.61435 99.82 True fake: scaffold gap size wrong estimation (local) 52137154 52138560 252398 250992 NC_000014.9 velvet.61435 99.86 True relocation, scaffold gap is present, inconsistency = 1063532 51068331 51070499 257689 255521 NC_000014.9 velvet.61435 99.86 True relocation, scaffold gap is present, inconsistency = -9048 51074229 51077368 261356 257700 NC_000014.9 velvet.61435 99.87 True fake: not a misassembly (possible transposable element) 19887219 19887920 261367 262068 NC_000014.9 velvet.61435 99.86 True fake: not a misassembly (possible transposable element) 51066092 51068358 264335 262069 NC_000014.9 velvet.61435 100.0 True relocation, scaffold gap is present, inconsistency = 31174357 19889761 19891394 264676 266309 NC_000014.9 velvet.61435 99.76 True relocation, scaffold gap is present, inconsistency = -19716 19871689 19872230 266320 266861 NC_000014.9 velvet.61435 100.0 True fake: scaffold gap size wrong estimation (local) 19874128 19880250 269533 275708 NC_000014.9 velvet.61435 99.77 True fake: scaffold gap size wrong estimation (local) 19880271 19882844 276493 279067 NC_000014.9 velvet.61435 99.77 True fake: scaffold gap size wrong estimation (local) 19883024 19884339 279860 281175 NC_000014.9 velvet.61435 99.92 True fake: scaffold gap size wrong estimation (local) 19884548 19887217 281866 284501 NC_000014.9 velvet.61435 98.57 True relocation, scaffold gap is present, inconsistency = 81937612 101839336 101842742 302611 299008 NC_000014.9 velvet.61435 99.97 True fake: scaffold gap size wrong estimation (local) 101837417 101838759 304930 303588 NC_000014.9 velvet.61435 100.0 True fake: scaffold gap size wrong estimation (local) 101834061 101837138 308973 305896 NC_000014.9 velvet.61435 100.0 True fake: scaffold gap size wrong estimation (local) 101828759 101833820 315114 310054 NC_000014.9 velvet.61435 99.98 True fake: scaffold gap size wrong estimation (local) 101827238 101828665 317276 315849 NC_000014.9 velvet.61435 100.0 True fake: scaffold gap size wrong estimation (local) 101819894 101826963 325987 318131 NC_000014.9 velvet.61435 99.97 True fake: scaffold gap size wrong estimation (local) 101818623 101819556 327294 326361 NC_000014.9 velvet.61435 100.0 True relocation, scaffold gap is present, inconsistency = 50668813 51147237 51149799 329867 327305 NC_000014.9 velvet.61435 99.92 True fake: not a misassembly (possible transposable element) 101685501 101686391 330304 331194 NC_000014.9 velvet.61435 99.55 True fake: not a misassembly (possible transposable element) 51146097 51146966 332086 331205 NC_000014.9 velvet.61435 98.19 True relocation, scaffold gap is present, inconsistency = 50538322 101687719 101688634 334517 335432 NC_000014.9 velvet.61435 99.78 True relocation, scaffold gap is present, inconsistency = -28697081 72992212 72993404 336091 337283 NC_000014.9 velvet.61435 100.0 True relocation, scaffold gap is present, inconsistency = 21850067 51137685 51141684 341743 337744 NC_000014.9 velvet.61435 99.92 True relocation, scaffold gap is present, inconsistency = 31309004 19820571 19825551 344873 350859 NC_000014.9 velvet.61435 99.51 True fake: scaffold gap size wrong estimation (local) 19828413 19830856 350870 353289 NC_000014.9 velvet.61435 98.81 True local misassembly 19825872 19827613 353314 355055 NC_000014.9 velvet.61435 99.77 True fake: scaffold gap size wrong estimation (local) 19830902 19832174 358334 359606 NC_000014.9 velvet.61435 99.76 True fake: scaffold gap size wrong estimation (local) 19832175 19836472 360232 364529 NC_000014.9 velvet.61435 99.35 True indel: indel (<= 5bp) 19836927 19837948 364983 366004 NC_000014.9 velvet.61435 98.63 True fake: scaffold gap size wrong estimation (local) 19838045 19838632 366320 366907 NC_000014.9 velvet.61435 98.81 True fake: scaffold gap size wrong estimation (local) 19839580 19840213 369187 369820 NC_000014.9 velvet.61435 100.0 True indel: indel (> 5bp) 19840224 19841266 369821 370863 NC_000014.9 velvet.61435 99.04 True fake: scaffold gap size wrong estimation (local) 19841267 19844190 371737 374660 NC_000014.9 velvet.61435 98.05 True relocation, scaffold gap is present, inconsistency = 31210893 51055094 51059473 379727 374671 NC_000014.9 velvet.61435 99.95 True relocation, scaffold gap is present, inconsistency = -1057394 52109569 52110158 382646 382057 NC_000014.9 velvet.61435 98.31 True local misassembly 52107528 52109323 384442 382647 NC_000014.9 velvet.61435 99.89 True fake: scaffold gap size wrong estimation (local) 52104797 52107292 387899 385405 NC_000014.9 velvet.61435 99.8 True relocation, scaffold gap is present, inconsistency = 1071533 51031161 51033106 390002 388057 NC_000014.9 velvet.61435 99.9 True relocation, inconsistency = -1082102 52112724 52113262 390541 390003 NC_000014.9 velvet.61435 100.0 True relocation, scaffold gap is present, inconsistency = 1070880 51038094 51039736 394291 392649 NC_000014.9 velvet.61435 99.33 True local misassembly 51035052 51037422 396662 394292 NC_000014.9 velvet.61435 99.83 True local misassembly 51037426 51038102 397349 396673 NC_000014.9 velvet.61435 99.85 True relocation, scaffold gap is present, inconsistency = 31113271 19922686 19924144 397360 398818 NC_000014.9 velvet.61435 99.86 True fake: scaffold gap size wrong estimation (local) 19924769 19929207 400194 404632 NC_000014.9 velvet.61435 99.75 True fake: scaffold gap size wrong estimation (local) 19929411 19932880 405197 409181 NC_000014.9 velvet.61435 99.88 True fake: scaffold gap size wrong estimation (local) 19933109 19933627 409812 410332 NC_000014.9 velvet.61435 100.0 True fake: scaffold gap size wrong estimation (local) 19933890 19934686 410645 411483 NC_000014.9 velvet.61435 99.74 True relocation, scaffold gap is present, inconsistency = 31117219 51051916 51053031 412609 411494 NC_000014.9 velvet.61435 99.1 True local misassembly 51050447 51051680 413843 412610 NC_000014.9 velvet.61435 99.84 True fake: scaffold gap size wrong estimation (local) 51040053 51048700 425552 416389 NC_000014.9 velvet.61435 99.7 True fake: scaffold gap size wrong estimation (local) 51010131 51016754 453699 446146 NC_000014.9 velvet.61435 99.73 True relocation, scaffold gap is present, inconsistency = -23981397 74990079 74990732 455177 454495 NC_000014.9 velvet.61435 95.61 True fake: scaffold gap size wrong estimation (local) 74987530 74989539 458483 456470 NC_000014.9 velvet.61435 99.75 True fake: scaffold gap size wrong estimation (local) 74986598 74987194 459935 459339 NC_000014.9 velvet.61435 100.0 True fake: scaffold gap size wrong estimation (local) 74984149 74986335 462832 460646 NC_000014.9 velvet.61435 99.82 True fake: scaffold gap size wrong estimation (local) 74983265 74983841 464558 463977 NC_000014.9 velvet.61435 100.0 True relocation, scaffold gap is present, inconsistency = 54975182 20007162 20008072 465479 464569 NC_000014.9 velvet.61435 99.78 True indel: indel (<= 5bp) 20006444 20007160 466196 465480 NC_000014.9 velvet.61435 98.05 True indel: indel (> 5bp) 20005464 20006422 467155 466197 NC_000014.9 velvet.61435 99.79 True fake: scaffold gap size wrong estimation (local) 20002695 20004984 471077 468788 NC_000014.9 velvet.61435 100.0 True relocation, scaffold gap is present, inconsistency = -30999431 51001504 51002115 471699 471088 NC_000014.9 velvet.61435 100.0 True fake: scaffold gap size wrong estimation (local) 50995774 51001223 478100 472651 NC_000014.9 velvet.61435 99.91 True fake: not a misassembly (possible transposable element) 19955704 19959897 478111 483137 NC_000014.9 velvet.61435 99.86 True fake: not a misassembly (possible transposable element) 50964039 50966800 505015 502254 NC_000014.9 velvet.61435 99.78 True fake: scaffold gap size wrong estimation (local) 50962625 50963771 507068 505921 NC_000014.9 velvet.61435 99.74 True fake: scaffold gap size wrong estimation (local) 50961259 50962538 508746 507467 NC_000014.9 velvet.61435 98.98 True fake: scaffold gap size wrong estimation (local) 50958826 50960314 511858 510369 NC_000014.9 velvet.61435 99.8 True relocation, scaffold gap is present, inconsistency = 30955395 19999444 20002670 515845 512619 NC_000014.9 velvet.61435 99.91 True fake: not a misassembly (possible transposable element) 19995912 19997752 515856 517695 NC_000014.9 velvet.61435 99.95 True fake: not a misassembly (possible transposable element) 19997780 19999339 519939 518380 NC_000014.9 velvet.61435 99.87 True fake: scaffold gap size wrong estimation (local) 19965766 19967818 549704 547652 NC_000014.9 velvet.61435 100.0 True fake: scaffold gap size wrong estimation (local) 19964269 19964997 551893 551165 NC_000014.9 velvet.61435 99.86 True fake: scaffold gap size wrong estimation (local) 19960165 19962507 556990 554434 NC_000014.9 velvet.61435 99.57 True relocation, scaffold gap is present, inconsistency = -5023835 24981523 24983989 559467 557001 NC_000014.9 velvet.61435 100.0 True relocation, scaffold gap is present, inconsistency = 26018414 51002414 51010140 559478 567490 NC_000014.9 velvet.61435 99.92 True relocation, scaffold gap is present, inconsistency = 45179 50939298 50941597 585427 583128 NC_000014.9 velvet.61435 100.0 True fake: scaffold gap size wrong estimation (local) 50936792 50938277 588563 587078 NC_000014.9 velvet.61435 99.93 True fake: scaffold gap size wrong estimation (local) 50929326 50936531 596844 589640 NC_000014.9 velvet.61435 99.99 True fake: scaffold gap size wrong estimation (local) 50927489 50929114 599473 597848 NC_000014.9 velvet.61435 100.0 True fake: scaffold gap size wrong estimation (local) 50926741 50927249 600196 599688 NC_000014.9 velvet.61435 100.0 True relocation, scaffold gap is present, inconsistency = 14982556 35943499 35944174 600882 600207 NC_000014.9 velvet.61435 100.0 True fake: scaffold gap size wrong estimation (local) 35936899 35943246 607484 600976 NC_000014.9 velvet.61435 99.86 True fake: scaffold gap size wrong estimation (local) 35934452 35936480 610687 608536 NC_000014.9 velvet.61435 98.23 True relocation, scaffold gap is present, inconsistency = -14992089 50923559 50926200 613668 611028 NC_000014.9 velvet.61435 99.96 True fake: scaffold gap size wrong estimation (local) 50921654 50923271 616239 614622 NC_000014.9 velvet.61435 100.0 True fake: scaffold gap size wrong estimation (local) 50919954 50921380 618508 617082 NC_000014.9 velvet.61435 100.0 True fake: scaffold gap size wrong estimation (local) 50918740 50919662 619751 618829 NC_000014.9 velvet.61435 99.78 True fake: scaffold gap size wrong estimation (local) 50914493 50918262 624730 620961 NC_000014.9 velvet.61435 99.89 True fake: scaffold gap size wrong estimation (extensive) 50887212 50888195 644327 643344 NC_000014.9 velvet.61435 99.7 True fake: scaffold gap size wrong estimation (local) 50884847 50886169 647100 645778 NC_000014.9 velvet.61435 99.7 True fake: scaffold gap size wrong estimation (local) 50882647 50884683 650008 647922 NC_000014.9 velvet.61435 98.97 True fake: scaffold gap size wrong estimation (local) 50877867 50881966 655388 651180 NC_000014.9 velvet.61435 99.76 True fake: scaffold gap size wrong estimation (local) 50874610 50877637 659462 656435 NC_000014.9 velvet.61435 99.87 True fake: scaffold gap size wrong estimation (local) 50873483 50874323 661333 660493 NC_000014.9 velvet.61435 100.0 True fake: scaffold gap size wrong estimation (local) 50871012 50873211 664087 661888 NC_000014.9 velvet.61435 99.91 True fake: scaffold gap size wrong estimation (local) 50867986 50870906 667906 664992 NC_000014.9 velvet.61435 99.66 True fake: scaffold gap size wrong estimation (local) 50865505 50867746 671205 668964 NC_000014.9 velvet.61435 99.91 True CONTIG velvet.61435 671277 misassembled 99229154 99241028 12130 1 NC_000014.9 velvet.61438 99.89 True fake: scaffold gap size wrong estimation (local) 99221128 99228995 21526 13148 NC_000014.9 velvet.61438 99.89 True fake: scaffold gap size wrong estimation (local) 99219304 99220876 23629 22067 NC_000014.9 velvet.61438 99.36 True fake: scaffold gap size wrong estimation (local) 99218353 99219027 24821 24147 NC_000014.9 velvet.61438 100.0 True fake: scaffold gap size wrong estimation (local) 99214607 99218059 29168 25601 NC_000014.9 velvet.61438 99.94 True fake: scaffold gap size wrong estimation (local) 99199729 99214368 45781 30164 NC_000014.9 velvet.61438 99.84 True fake: scaffold gap size wrong estimation (extensive) 99186475 99190202 51547 47209 NC_000014.9 velvet.61438 99.92 True fake: scaffold gap size wrong estimation (local) 99185448 99186244 52943 52147 NC_000014.9 velvet.61438 99.87 True fake: scaffold gap size wrong estimation (local) 99179478 99185157 59893 53496 NC_000014.9 velvet.61438 99.88 True relocation, scaffold gap is present, inconsistency = -20168 99190461 99199635 69735 59904 NC_000014.9 velvet.61438 99.99 True relocation, scaffold gap is present, inconsistency = -1753866 100933838 100944316 80930 69746 NC_000014.9 velvet.61438 99.88 True fake: scaffold gap size wrong estimation (local) 100932494 100933686 82607 81415 NC_000014.9 velvet.61438 99.66 True fake: scaffold gap size wrong estimation (local) 100922704 100931573 93111 84244 NC_000014.9 velvet.61438 99.85 True fake: not a misassembly (possible transposable element) 64589893 64591136 94365 93122 NC_000014.9 velvet.61438 100.0 True fake: not a misassembly (possible transposable element) 100916135 100918606 96936 94376 NC_000014.9 velvet.61438 100.0 True fake: scaffold gap size wrong estimation (local) 100902780 100915939 111763 97911 NC_000014.9 velvet.61438 99.97 True fake: scaffold gap size wrong estimation (local) 100871292 100873276 141352 139368 NC_000014.9 velvet.61438 100.0 True local misassembly 100850611 100870249 160991 141353 NC_000014.9 velvet.61438 99.95 True fake: scaffold gap size wrong estimation (local) 100843948 100850303 168918 162087 NC_000014.9 velvet.61438 98.79 True fake: scaffold gap size wrong estimation (local) 100833531 100843831 180204 169803 NC_000014.9 velvet.61438 99.94 True fake: scaffold gap size wrong estimation (local) 100820137 100833269 195798 181243 NC_000014.9 velvet.61438 99.95 True relocation, scaffold gap is present, inconsistency = 10621 100803538 100805991 201776 199323 NC_000014.9 velvet.61438 99.96 True relocation, scaffold gap is present, inconsistency = 23586563 77215615 77216901 203122 201850 NC_000014.9 velvet.61438 98.66 True fake: scaffold gap size wrong estimation (local) 77203386 77215331 215980 204031 NC_000014.9 velvet.61438 99.85 True fake: scaffold gap size wrong estimation (local) 77194848 77203100 225425 216995 NC_000014.9 velvet.61438 99.89 True fake: scaffold gap size wrong estimation (local) 77192721 77193435 228354 227640 NC_000014.9 velvet.61438 98.46 True local misassembly 77191814 77192631 229172 228355 NC_000014.9 velvet.61438 100.0 True fake: not a misassembly (possible transposable element) 77174682 77175285 233364 232761 NC_000014.9 velvet.61438 100.0 True fake: not a misassembly (possible transposable element) 77186635 77188595 235361 233375 NC_000014.9 velvet.61438 98.85 True relocation, scaffold gap is present, inconsistency = -44342 77227660 77228377 238678 237961 NC_000014.9 velvet.61438 99.86 True fake: scaffold gap size wrong estimation (local) 77227028 77227614 239432 238846 NC_000014.9 velvet.61438 99.66 True fake: scaffold gap size wrong estimation (local) 77223375 77226712 243867 240530 NC_000014.9 velvet.61438 99.55 True fake: scaffold gap size wrong estimation (local) 77221642 77223181 246220 244681 NC_000014.9 velvet.61438 99.74 True fake: scaffold gap size wrong estimation (local) 77218231 77220862 250229 247598 NC_000014.9 velvet.61438 99.7 True fake: scaffold gap size wrong estimation (local) 77217076 77218142 251567 250501 NC_000014.9 velvet.61438 99.63 True relocation, scaffold gap is present, inconsistency = -23557195 100768896 100771659 256942 254179 NC_000014.9 velvet.61438 100.0 True fake: scaffold gap size wrong estimation (local) 100763591 100768671 263336 257942 NC_000014.9 velvet.61438 99.96 True fake: not a misassembly (possible transposable element) 77150843 77152653 265157 263347 NC_000014.9 velvet.61438 99.78 True fake: not a misassembly (possible transposable element) 100761234 100763534 267459 265168 NC_000014.9 velvet.61438 99.48 True relocation, scaffold gap is present, inconsistency = 23611096 77148592 77150127 269005 267470 NC_000014.9 velvet.61438 99.87 True relocation, scaffold gap is present, inconsistency = -9717 77157749 77158298 269565 269016 NC_000014.9 velvet.61438 99.82 True relocation, scaffold gap is present, inconsistency = -23603027 100759596 100760765 270745 269576 NC_000014.9 velvet.61438 100.0 True relocation, scaffold gap is present, inconsistency = 23572206 77181898 77186057 276237 272078 NC_000014.9 velvet.61438 99.71 True fake: scaffold gap size wrong estimation (local) 77175589 77177433 278085 276248 NC_000014.9 velvet.61438 99.51 True fake: not a misassembly (possible transposable element) 77160386 77163517 306259 303016 NC_000014.9 velvet.61438 99.77 True fake: not a misassembly (possible transposable element) 77144496 77146926 311092 308662 NC_000014.9 velvet.61438 99.88 True CONTIG velvet.61438 311092 misassembled 92585783 92588238 2456 1 NC_000014.9 velvet.61440 99.96 True relocation, scaffold gap is present, inconsistency = -19133 92594426 92604905 12944 2467 NC_000014.9 velvet.61440 99.9 True fake: scaffold gap size wrong estimation (extensive) 92585180 92585774 14046 13458 NC_000014.9 velvet.61440 98.82 True relocation, scaffold gap is present, inconsistency = -9028 92592995 92593499 15259 14755 NC_000014.9 velvet.61440 100.0 True relocation, scaffold gap is present, inconsistency = 2969584 95563733 95564806 15909 16982 NC_000014.9 velvet.61440 99.53 True fake: scaffold gap size wrong estimation (local) 95565449 95566696 18204 19451 NC_000014.9 velvet.61440 99.68 True fake: scaffold gap size wrong estimation (local) 95566952 95567466 19713 20227 NC_000014.9 velvet.61440 99.03 True fake: scaffold gap size wrong estimation (local) 95567748 95570032 21375 23579 NC_000014.9 velvet.61440 95.86 True fake: scaffold gap size wrong estimation (local) 95570418 95571101 25042 25725 NC_000014.9 velvet.61440 100.0 True fake: scaffold gap size wrong estimation (local) 95571365 95572990 25845 27470 NC_000014.9 velvet.61440 99.69 True fake: scaffold gap size wrong estimation (local) 95573258 95574560 28448 29750 NC_000014.9 velvet.61440 99.69 True fake: scaffold gap size wrong estimation (local) 95575128 95578874 30857 34605 NC_000014.9 velvet.61440 99.68 True fake: scaffold gap size wrong estimation (local) 95579772 95580441 36273 36945 NC_000014.9 velvet.61440 99.55 True fake: scaffold gap size wrong estimation (local) 95584246 95584756 38602 39109 NC_000014.9 velvet.61440 98.43 True fake: scaffold gap size wrong estimation (local) 95585620 95587032 41206 42616 NC_000014.9 velvet.61440 99.58 True local misassembly 95580531 95582539 42627 44634 NC_000014.9 velvet.61440 99.65 True relocation, scaffold gap is present, inconsistency = 13209 95610864 95612122 59750 61008 NC_000014.9 velvet.61440 99.44 True fake: scaffold gap size wrong estimation (local) 95613698 95614288 63402 63992 NC_000014.9 velvet.61440 99.83 True relocation, scaffold gap is present, inconsistency = -14533 95600602 95601121 64839 65358 NC_000014.9 velvet.61440 95.58 True fake: scaffold gap size wrong estimation (local) 95601122 95602663 66174 67715 NC_000014.9 velvet.61440 99.16 True fake: not a misassembly (possible transposable element) 95616078 95622080 68368 74373 NC_000014.9 velvet.61440 98.82 True fake: not a misassembly (possible transposable element) 95603900 95605975 74384 76444 NC_000014.9 velvet.61440 98.94 True fake: scaffold gap size wrong estimation (local) 95606268 95608138 77543 79413 NC_000014.9 velvet.61440 99.95 True fake: scaffold gap size wrong estimation (local) 95612898 95613666 79424 80192 NC_000014.9 velvet.61440 99.61 True local misassembly 95608412 95610738 80461 82783 NC_000014.9 velvet.61440 99.74 True fake: scaffold gap size wrong estimation (local) 95614300 95615980 82794 84445 NC_000014.9 velvet.61440 97.73 True fake: scaffold gap size wrong estimation (local) 95622855 95627520 84472 89107 NC_000014.9 velvet.61440 96.19 True fake: scaffold gap size wrong estimation (local) 95627819 95630544 90185 92909 NC_000014.9 velvet.61440 99.71 True fake: scaffold gap size wrong estimation (local) 95630715 95631844 93702 94831 NC_000014.9 velvet.61440 99.82 True fake: scaffold gap size wrong estimation (local) 95632054 95638102 95474 101504 NC_000014.9 velvet.61440 99.54 True fake: scaffold gap size wrong estimation (local) 95638679 95642757 102922 107000 NC_000014.9 velvet.61440 99.53 True fake: scaffold gap size wrong estimation (local) 95642758 95646200 111140 114582 NC_000014.9 velvet.61440 99.45 True fake: scaffold gap size wrong estimation (local) 95650906 95653391 114593 116999 NC_000014.9 velvet.61440 96.73 True relocation, scaffold gap is present, inconsistency = -54791915 40862829 40864760 118352 120283 NC_000014.9 velvet.61440 99.84 True relocation, scaffold gap is present, inconsistency = 54695863 95560634 95561381 121041 120294 NC_000014.9 velvet.61440 99.47 True fake: scaffold gap size wrong estimation (local) 95557782 95558842 124011 122950 NC_000014.9 velvet.61440 99.06 True relocation, scaffold gap is present, inconsistency = -1462927 97015948 97020698 128772 124022 NC_000014.9 velvet.61440 99.96 True fake: scaffold gap size wrong estimation (local) 97012848 97015681 132695 129741 NC_000014.9 velvet.61440 99.89 True relocation, scaffold gap is present, inconsistency = 1357836 95654302 95655001 132706 133414 NC_000014.9 velvet.61440 99.53 True fake: scaffold gap size wrong estimation (local) 95655355 95661655 133552 140575 NC_000014.9 velvet.61440 99.15 True fake: scaffold gap size wrong estimation (local) 95661846 95663879 141077 143155 NC_000014.9 velvet.61440 99.95 True fake: scaffold gap size wrong estimation (local) 95664163 95665801 144053 145691 NC_000014.9 velvet.61440 99.82 True fake: scaffold gap size wrong estimation (local) 95666095 95669409 146576 149890 NC_000014.9 velvet.61440 99.79 True fake: not a misassembly (possible transposable element) 40873571 40875827 149901 152156 NC_000014.9 velvet.61440 99.87 True fake: not a misassembly (possible transposable element) 95679466 95680877 153527 154877 NC_000014.9 velvet.61440 95.35 True fake: scaffold gap size wrong estimation (local) 95681168 95687679 154982 162505 NC_000014.9 velvet.61440 99.79 True fake: scaffold gap size wrong estimation (local) 95688278 95689031 163557 164310 NC_000014.9 velvet.61440 99.6 True fake: scaffold gap size wrong estimation (local) 95689354 95693941 165206 169782 NC_000014.9 velvet.61440 99.52 True fake: scaffold gap size wrong estimation (local) 95694170 95695614 170761 172205 NC_000014.9 velvet.61440 99.86 True fake: scaffold gap size wrong estimation (local) 95695893 95696976 172818 173901 NC_000014.9 velvet.61440 100.0 True fake: scaffold gap size wrong estimation (local) 95697222 95698735 174447 175960 NC_000014.9 velvet.61440 100.0 True fake: scaffold gap size wrong estimation (local) 95699038 95701336 176845 179143 NC_000014.9 velvet.61440 99.96 True local misassembly 95704851 95705765 179144 180058 NC_000014.9 velvet.61440 98.91 True fake: scaffold gap size wrong estimation (local) 95706140 95706795 180411 181066 NC_000014.9 velvet.61440 100.0 True fake: scaffold gap size wrong estimation (local) 95707074 95707928 182474 183328 NC_000014.9 velvet.61440 100.0 True relocation, scaffold gap is present, inconsistency = 60523 95770447 95771090 185324 185967 NC_000014.9 velvet.61440 99.84 True fake: scaffold gap size wrong estimation (local) 95771210 95772327 186122 187240 NC_000014.9 velvet.61440 99.64 True fake: scaffold gap size wrong estimation (local) 95775453 95778967 187931 191445 NC_000014.9 velvet.61440 99.74 True indel: indel (> 5bp) 95779035 95780530 191555 193050 NC_000014.9 velvet.61440 100.0 True fake: scaffold gap size wrong estimation (local) 95780813 95781536 193163 193886 NC_000014.9 velvet.61440 100.0 True inversion, scaffold gap is present 95781527 95782278 194648 193897 NC_000014.9 velvet.61440 100.0 True fake: scaffold gap size wrong estimation (local) 95772588 95775154 198768 196202 NC_000014.9 velvet.61440 99.84 True fake: scaffold gap size wrong estimation (local) 95752273 95753346 216341 215268 NC_000014.9 velvet.61440 100.0 True relocation, scaffold gap is present, inconsistency = 53221 95806578 95809535 216352 219309 NC_000014.9 velvet.61440 99.93 True fake: scaffold gap size wrong estimation (local) 95809635 95811097 220152 221614 NC_000014.9 velvet.61440 99.93 True relocation, scaffold gap is present, inconsistency = 57364 95737676 95752260 236366 221625 NC_000014.9 velvet.61440 99.78 True fake: scaffold gap size wrong estimation (local) 95726623 95729835 244524 241314 NC_000014.9 velvet.61440 99.91 True fake: scaffold gap size wrong estimation (local) 95721643 95726384 250315 245574 NC_000014.9 velvet.61440 99.98 True fake: scaffold gap size wrong estimation (local) 95717740 95721414 254798 251124 NC_000014.9 velvet.61440 99.97 True fake: scaffold gap size wrong estimation (local) 95711469 95712706 256046 254809 NC_000014.9 velvet.61440 100.0 True fake: scaffold gap size wrong estimation (local) 95708509 95711176 259897 257230 NC_000014.9 velvet.61440 100.0 True fake: scaffold gap size wrong estimation (local) 95701582 95704620 264253 261215 NC_000014.9 velvet.61440 100.0 True relocation, scaffold gap is present, inconsistency = 25378 95730009 95730914 264264 265169 NC_000014.9 velvet.61440 99.45 True fake: scaffold gap size wrong estimation (local) 95731243 95732411 265576 266744 NC_000014.9 velvet.61440 99.91 True fake: scaffold gap size wrong estimation (local) 95732776 95734311 267756 269324 NC_000014.9 velvet.61440 97.9 True fake: scaffold gap size wrong estimation (local) 95734835 95737115 270588 272868 NC_000014.9 velvet.61440 99.96 True relocation, scaffold gap is present, inconsistency = 54844351 40883350 40887629 280002 275723 NC_000014.9 velvet.61440 99.91 True fake: scaffold gap size wrong estimation (local) 40877258 40883076 287673 281034 NC_000014.9 velvet.61440 99.93 True relocation, scaffold gap is present, inconsistency = -54802514 95675202 95678542 292251 288903 NC_000014.9 velvet.61440 99.55 True fake: scaffold gap size wrong estimation (local) 95669500 95674902 298812 293410 NC_000014.9 velvet.61440 99.74 True relocation, scaffold gap is present, inconsistency = 54792350 40875829 40877139 300133 298823 NC_000014.9 velvet.61440 100.0 True fake: scaffold gap size wrong estimation (local) 40865471 40873230 310983 302476 NC_000014.9 velvet.61440 99.86 True relocation, scaffold gap is present, inconsistency = 33197575 74074558 74076402 314736 316580 NC_000014.9 velvet.61440 99.89 True fake: scaffold gap size wrong estimation (local) 74076850 74078522 317848 319548 NC_000014.9 velvet.61440 98.18 True relocation, scaffold gap is present, inconsistency = 28223553 102303114 102305407 322880 320587 NC_000014.9 velvet.61440 100.0 True relocation, scaffold gap is present, inconsistency = 26301111 76000484 76001992 324399 322891 NC_000014.9 velvet.61440 95.69 True local misassembly 75999402 76000252 325250 324400 NC_000014.9 velvet.61440 100.0 True fake: scaffold gap size wrong estimation (local) 75994104 75999214 331482 326372 NC_000014.9 velvet.61440 99.96 True relocation, scaffold gap is present, inconsistency = 1880355 74104825 74106651 338580 340341 NC_000014.9 velvet.61440 96.35 True fake: scaffold gap size wrong estimation (local) 74106894 74109227 341714 344047 NC_000014.9 velvet.61440 100.0 True fake: scaffold gap size wrong estimation (local) 74109326 74110432 345092 346198 NC_000014.9 velvet.61440 100.0 True fake: scaffold gap size wrong estimation (local) 74112398 74113137 348891 349630 NC_000014.9 velvet.61440 99.86 True local misassembly 74113391 74113994 349631 350234 NC_000014.9 velvet.61440 98.34 True relocation, scaffold gap is present, inconsistency = 1830177 75948448 75949378 355441 354511 NC_000014.9 velvet.61440 100.0 True fake: scaffold gap size wrong estimation (local) 75945538 75947687 359219 357070 NC_000014.9 velvet.61440 99.91 True fake: scaffold gap size wrong estimation (local) 75942186 75944666 363431 360951 NC_000014.9 velvet.61440 99.96 True fake: scaffold gap size wrong estimation (local) 75940354 75941837 366006 364523 NC_000014.9 velvet.61440 99.93 True relocation, scaffold gap is present, inconsistency = 1811928 74126067 74127788 366644 368365 NC_000014.9 velvet.61440 99.94 True fake: scaffold gap size wrong estimation (local) 74127874 74128685 369693 370504 NC_000014.9 velvet.61440 100.0 True fake: scaffold gap size wrong estimation (local) 74135851 74137169 372227 373545 NC_000014.9 velvet.61440 99.85 True relocation, scaffold gap is present, inconsistency = -5332341 68806404 68811871 375121 380588 NC_000014.9 velvet.61440 99.91 True relocation, scaffold gap is present, inconsistency = 5395915 74237179 74242601 415478 409981 NC_000014.9 velvet.61440 99.93 True fake: scaffold gap size wrong estimation (local) 74211350 74215052 436639 432831 NC_000014.9 velvet.61440 99.97 True fake: scaffold gap size wrong estimation (local) 74206649 74210194 442316 438770 NC_000014.9 velvet.61440 99.97 True fake: scaffold gap size wrong estimation (local) 74205812 74206445 444104 443471 NC_000014.9 velvet.61440 100.0 True fake: scaffold gap size wrong estimation (local) 74202057 74205571 448002 444488 NC_000014.9 velvet.61440 99.94 True fake: scaffold gap size wrong estimation (local) 74200420 74201797 450184 448813 NC_000014.9 velvet.61440 99.42 True fake: scaffold gap size wrong estimation (local) 74195106 74200120 456504 451317 NC_000014.9 velvet.61440 99.72 True fake: scaffold gap size wrong estimation (local) 74193420 74194870 458812 457383 NC_000014.9 velvet.61440 98.4 True fake: scaffold gap size wrong estimation (local) 74192560 74193230 459629 458959 NC_000014.9 velvet.61440 99.85 True fake: scaffold gap size wrong estimation (local) 74190606 74191619 462115 461102 NC_000014.9 velvet.61440 100.0 True fake: scaffold gap size wrong estimation (local) 74181437 74182020 464694 464111 NC_000014.9 velvet.61440 100.0 True relocation, scaffold gap is present, inconsistency = -8558 74187029 74189984 467660 464705 NC_000014.9 velvet.61440 99.9 True fake: scaffold gap size wrong estimation (local) 74182268 74183083 468673 467858 NC_000014.9 velvet.61440 99.39 True local misassembly 74184339 74185278 469813 468874 NC_000014.9 velvet.61440 98.83 True local misassembly 74183370 74184165 470609 469814 NC_000014.9 velvet.61440 100.0 True fake: scaffold gap size wrong estimation (local) 74179680 74180251 472081 471510 NC_000014.9 velvet.61440 99.83 True CONTIG velvet.61440 473865 misassembled 42889548 42896448 203 7146 NC_000014.9 velvet.61441 99.09 True fake: scaffold gap size wrong estimation (local) 42896537 42899040 7295 9798 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 42899322 42900884 10929 12491 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 42901184 42902744 13128 14682 NC_000014.9 velvet.61441 99.61 True fake: scaffold gap size wrong estimation (local) 42903109 42905149 15654 17694 NC_000014.9 velvet.61441 99.9 True indel: indel (<= 5bp) 42905150 42905766 17696 18312 NC_000014.9 velvet.61441 98.06 True fake: scaffold gap size wrong estimation (local) 42905767 42908205 20588 23026 NC_000014.9 velvet.61441 99.59 True relocation, scaffold gap is present, inconsistency = 8433399 34470382 34471066 25012 24328 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 34468715 34469778 27089 26026 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 34467660 34468432 28035 27263 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 34463520 34464197 30464 29787 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 34459709 34461959 34871 32621 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 34457097 34457740 38210 37567 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 34452248 34454804 43867 41313 NC_000014.9 velvet.61441 99.92 True fake: scaffold gap size wrong estimation (local) 34449770 34451440 47158 45488 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 34440886 34441897 50999 49988 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 34438068 34440604 54700 52070 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 34436937 34437975 56401 55363 NC_000014.9 velvet.61441 100.0 True inversion, scaffold gap is present 34442166 34442980 56648 57461 NC_000014.9 velvet.61441 99.88 True inversion, scaffold gap is present 34447226 34447926 58832 58132 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (extensive) 34419870 34422313 94582 92140 NC_000014.9 velvet.61441 99.96 True fake: scaffold gap size wrong estimation (local) 34418925 34419794 98562 97693 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 34418048 34418627 99311 98732 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 34415508 34417617 102498 100389 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 34407319 34408662 105607 104284 NC_000014.9 velvet.61441 98.5 True fake: scaffold gap size wrong estimation (local) 34406108 34407050 106670 105728 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 34403199 34405837 110484 107846 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 65565 34478037 34478830 117119 117958 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 34480801 34481689 120600 121488 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 34482995 34483557 123857 124419 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 34485673 34486469 127372 128168 NC_000014.9 velvet.61441 99.62 True fake: scaffold gap size wrong estimation (local) 34488898 34490019 135664 136785 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 34491081 34491777 139083 139779 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 34496425 34497860 146008 147443 NC_000014.9 velvet.61441 99.93 True fake: scaffold gap size wrong estimation (local) 34498786 34499316 149650 150180 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 34500030 34500706 150775 151451 NC_000014.9 velvet.61441 99.85 True fake: scaffold gap size wrong estimation (local) 34505834 34506797 157902 158865 NC_000014.9 velvet.61441 99.9 True relocation, scaffold gap is present, inconsistency = 37290908 71802284 71803137 163444 164297 NC_000014.9 velvet.61441 99.88 True fake: not a misassembly (possible transposable element) 34368229 34370188 166269 164308 NC_000014.9 velvet.61441 99.8 True fake: not a misassembly (possible transposable element) 71803431 71805483 166742 168794 NC_000014.9 velvet.61441 99.9 True fake: scaffold gap size wrong estimation (local) 71805971 71806853 170277 171159 NC_000014.9 velvet.61441 99.89 True relocation, scaffold gap is present, inconsistency = 37447128 34330166 34332641 199836 197361 NC_000014.9 velvet.61441 99.52 True fake: scaffold gap size wrong estimation (local) 34327744 34329672 202911 200988 NC_000014.9 velvet.61441 99.17 True fake: scaffold gap size wrong estimation (local) 34326257 34327453 205011 203789 NC_000014.9 velvet.61441 98.05 True relocation, scaffold gap is present, inconsistency = 44000096 78352095 78353368 229557 230830 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -17366177 60987202 60989523 230841 233162 NC_000014.9 velvet.61441 99.91 True relocation, scaffold gap is present, inconsistency = 26693070 34293172 34294121 234122 233173 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -26740273 61007402 61009387 260184 258180 NC_000014.9 velvet.61441 98.9 True inversion, scaffold gap is present 61015471 61017089 263601 265224 NC_000014.9 velvet.61441 99.51 True fake: scaffold gap size wrong estimation (local) 61017233 61023347 266148 272305 NC_000014.9 velvet.61441 99.9 True fake: scaffold gap size wrong estimation (local) 61023628 61029171 273372 278911 NC_000014.9 velvet.61441 99.87 True relocation, scaffold gap is present, inconsistency = 2263400 63297317 63298753 285093 283657 NC_000014.9 velvet.61441 99.93 True relocation, scaffold gap is present, inconsistency = -15071961 78368656 78369267 285715 285104 NC_000014.9 velvet.61441 99.67 True fake: scaffold gap size wrong estimation (local) 78362304 78368439 292496 286320 NC_000014.9 velvet.61441 99.06 True fake: scaffold gap size wrong estimation (local) 78353348 78355463 298268 296154 NC_000014.9 velvet.61441 99.86 True relocation, scaffold gap is present, inconsistency = 17360663 60990289 60992674 300664 298279 NC_000014.9 velvet.61441 99.75 True relocation, scaffold gap is present, inconsistency = -17371943 78355682 78357184 307214 305712 NC_000014.9 velvet.61441 99.93 True fake: scaffold gap size wrong estimation (local) 78350271 78351765 308718 307225 NC_000014.9 velvet.61441 99.6 True relocation, scaffold gap is present, inconsistency = 17363107 60972194 60987153 323689 308729 NC_000014.9 velvet.61441 99.91 True fake: scaffold gap size wrong estimation (local) 60958907 60959904 334567 333567 NC_000014.9 velvet.61441 99.7 True fake: scaffold gap size wrong estimation (local) 60955653 60957294 338700 337059 NC_000014.9 velvet.61441 99.94 True fake: scaffold gap size wrong estimation (local) 60947636 60955370 347959 339643 NC_000014.9 velvet.61441 98.79 True fake: scaffold gap size wrong estimation (local) 60946809 60947410 348709 348108 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 60943121 60946698 352906 349330 NC_000014.9 velvet.61441 99.8 True fake: scaffold gap size wrong estimation (local) 60942009 60942999 354838 353853 NC_000014.9 velvet.61441 99.49 True relocation, scaffold gap is present, inconsistency = -2324137 63261703 63263965 359281 357019 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63259155 63261516 362166 359805 NC_000014.9 velvet.61441 99.92 True fake: scaffold gap size wrong estimation (local) 63258231 63258944 363802 362925 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63257237 63257955 364962 364244 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63244434 63247759 375928 372597 NC_000014.9 velvet.61441 99.94 True relocation, scaffold gap is present, inconsistency = -8960 63252075 63253383 377247 375939 NC_000014.9 velvet.61441 99.69 True fake: scaffold gap size wrong estimation (extensive) 63243611 63244293 377940 377258 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63239385 63243366 382243 378262 NC_000014.9 velvet.61441 99.95 True relocation, scaffold gap is present, inconsistency = -15096072 78321063 78332301 396753 385399 NC_000014.9 velvet.61441 99.97 True fake: scaffold gap size wrong estimation (local) 78318303 78320832 400310 397781 NC_000014.9 velvet.61441 99.96 True fake: scaffold gap size wrong estimation (local) 78294577 78310251 422134 404948 NC_000014.9 velvet.61441 99.76 True fake: scaffold gap size wrong estimation (local) 78289892 78294270 427384 423006 NC_000014.9 velvet.61441 99.91 True relocation, scaffold gap is present, inconsistency = 16578220 61690494 61692182 446874 448562 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 61692268 61693454 448971 450157 NC_000014.9 velvet.61441 99.83 True fake: scaffold gap size wrong estimation (local) 61693682 61701735 451002 459906 NC_000014.9 velvet.61441 99.96 True relocation, scaffold gap is present, inconsistency = 16513667 78216223 78217735 460727 462239 NC_000014.9 velvet.61441 99.93 True fake: scaffold gap size wrong estimation (local) 78218202 78224298 463313 469706 NC_000014.9 velvet.61441 99.95 True fake: scaffold gap size wrong estimation (local) 78226313 78227358 472215 473260 NC_000014.9 velvet.61441 98.57 True fake: scaffold gap size wrong estimation (local) 78228442 78229289 475451 476298 NC_000014.9 velvet.61441 99.88 True local misassembly 78227379 78228173 476309 477103 NC_000014.9 velvet.61441 99.87 True fake: scaffold gap size wrong estimation (local) 78229309 78230083 478344 479118 NC_000014.9 velvet.61441 99.87 True fake: scaffold gap size wrong estimation (local) 78230276 78233707 480213 483644 NC_000014.9 velvet.61441 99.94 True fake: scaffold gap size wrong estimation (local) 78235058 78235591 485867 486400 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 12807 78248409 78254406 492514 486411 NC_000014.9 velvet.61441 99.9 True relocation, scaffold gap is present, inconsistency = 7299 78233961 78235017 498607 499650 NC_000014.9 velvet.61441 98.68 True fake: not a misassembly (possible transposable element) 78235597 78239863 503957 499661 NC_000014.9 velvet.61441 99.14 True fake: not a misassembly (possible transposable element) 78239998 78241385 503968 505355 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78241652 78244167 506504 509019 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -16514673 61729505 61731893 509030 511418 NC_000014.9 velvet.61441 99.83 True relocation, scaffold gap is present, inconsistency = 16460893 78207135 78209411 528043 525767 NC_000014.9 velvet.61441 99.74 True fake: scaffold gap size wrong estimation (local) 78193764 78206867 542266 529048 NC_000014.9 velvet.61441 99.74 True fake: scaffold gap size wrong estimation (local) 78190936 78193570 545914 543285 NC_000014.9 velvet.61441 99.58 True fake: scaffold gap size wrong estimation (local) 78189800 78190607 547498 546691 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -25954 78209415 78215743 553838 547509 NC_000014.9 velvet.61441 99.84 True relocation, scaffold gap is present, inconsistency = 39502 78255256 78258871 553849 557516 NC_000014.9 velvet.61441 99.97 True fake: scaffold gap size wrong estimation (local) 78259164 78260678 558359 559873 NC_000014.9 velvet.61441 99.93 True fake: scaffold gap size wrong estimation (local) 78260810 78266326 560621 566239 NC_000014.9 velvet.61441 99.93 True fake: scaffold gap size wrong estimation (local) 78266587 78283541 566985 584808 NC_000014.9 velvet.61441 99.89 True relocation, scaffold gap is present, inconsistency = 75080 78180118 78182482 596197 593833 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 17263370 60914587 60916565 596380 598358 NC_000014.9 velvet.61441 99.95 True relocation, scaffold gap is present, inconsistency = 17263312 78182742 78189585 608293 601223 NC_000014.9 velvet.61441 99.78 True fake: scaffold gap size wrong estimation (local) 78173808 78179793 614271 608304 NC_000014.9 velvet.61441 99.67 True fake: scaffold gap size wrong estimation (local) 78171331 78173694 617642 615238 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 16514675 61656039 61656645 618259 617653 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 16627871 78284527 78288014 618270 621757 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78288284 78289660 622854 624230 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 117067 78159762 78171206 636622 624241 NC_000014.9 velvet.61441 99.89 True relocation, scaffold gap is present, inconsistency = 136933 78310292 78314908 638775 644345 NC_000014.9 velvet.61441 99.74 True fake: scaffold gap size wrong estimation (local) 78315292 78318301 645420 648429 NC_000014.9 velvet.61441 99.87 True relocation, scaffold gap is present, inconsistency = -15081307 63237005 63238630 648440 649999 NC_000014.9 velvet.61441 95.92 True fake: not a misassembly (possible transposable element) 63253505 63256188 653405 656088 NC_000014.9 velvet.61441 99.85 True fake: not a misassembly (possible transposable element) 63248006 63250758 656099 658851 NC_000014.9 velvet.61441 99.85 True relocation, scaffold gap is present, inconsistency = 15081864 78345794 78350037 672023 676266 NC_000014.9 velvet.61441 99.84 True fake: scaffold gap size wrong estimation (extensive) 78357253 78361902 676277 680926 NC_000014.9 velvet.61441 99.83 True relocation, scaffold gap is present, inconsistency = -45268307 33094659 33095682 681990 683013 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 33095975 33108210 684001 696387 NC_000014.9 velvet.61441 99.94 True fake: scaffold gap size wrong estimation (local) 33108411 33109835 697218 698642 NC_000014.9 velvet.61441 99.93 True fake: scaffold gap size wrong estimation (local) 33109949 33111673 699046 700770 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 45015791 78129488 78133217 706523 702794 NC_000014.9 velvet.61441 99.87 True fake: scaffold gap size wrong estimation (local) 78127746 78129209 708849 707386 NC_000014.9 velvet.61441 99.93 True fake: scaffold gap size wrong estimation (local) 78119225 78127588 718355 709634 NC_000014.9 velvet.61441 95.36 True relocation, scaffold gap is present, inconsistency = 14847604 63265405 63271610 718366 724619 NC_000014.9 velvet.61441 99.1 True fake: scaffold gap size wrong estimation (local) 63275190 63276218 724897 725925 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -30146352 33129877 33134871 725936 730952 NC_000014.9 velvet.61441 99.38 True relocation, scaffold gap is present, inconsistency = 45197719 78332601 78340394 730963 738760 NC_000014.9 velvet.61441 99.86 True fake: scaffold gap size wrong estimation (local) 78341367 78345762 738771 743166 NC_000014.9 velvet.61441 99.84 True local misassembly 78340401 78341333 743177 744109 NC_000014.9 velvet.61441 100.0 True relocation, inconsistency = -15065084 63276250 63277989 744110 745849 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63282715 63289995 745860 753228 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63290234 63292697 754137 756746 NC_000014.9 velvet.61441 99.96 True fake: scaffold gap size wrong estimation (local) 63292883 63293673 757212 758002 NC_000014.9 velvet.61441 99.87 True fake: scaffold gap size wrong estimation (local) 63293884 63297078 758858 762052 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -19351 63280325 63282696 764650 767000 NC_000014.9 velvet.61441 99.11 True relocation, scaffold gap is present, inconsistency = -18097 63264610 63265370 767011 767771 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 15103936 78369317 78372175 767782 771355 NC_000014.9 velvet.61441 99.43 True fake: scaffold gap size wrong estimation (local) 78372616 78374530 772577 774492 NC_000014.9 velvet.61441 99.63 True fake: scaffold gap size wrong estimation (local) 78380807 78385327 774994 779514 NC_000014.9 velvet.61441 99.38 True fake: scaffold gap size wrong estimation (local) 78385328 78386029 784795 785496 NC_000014.9 velvet.61441 98.15 True indel: stretch of mismatches 78386062 78386809 785529 786276 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78387086 78389069 787257 789240 NC_000014.9 velvet.61441 99.95 True fake: scaffold gap size wrong estimation (local) 78389345 78390834 790142 791631 NC_000014.9 velvet.61441 99.87 True fake: scaffold gap size wrong estimation (local) 78390919 78397632 791765 799128 NC_000014.9 velvet.61441 99.91 True fake: scaffold gap size wrong estimation (local) 78398237 78401220 800522 803505 NC_000014.9 velvet.61441 99.83 True fake: scaffold gap size wrong estimation (local) 78401467 78413334 804627 816558 NC_000014.9 velvet.61441 99.81 True fake: scaffold gap size wrong estimation (local) 78418048 78419288 816569 817809 NC_000014.9 velvet.61441 100.0 True local misassembly 78413585 78417810 818904 823256 NC_000014.9 velvet.61441 99.81 True fake: scaffold gap size wrong estimation (local) 78419991 78421070 825948 827027 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78421295 78429097 827953 835755 NC_000014.9 velvet.61441 99.85 True fake: scaffold gap size wrong estimation (local) 78429378 78437330 836525 844973 NC_000014.9 velvet.61441 99.41 True fake: scaffold gap size wrong estimation (local) 78442313 78444664 845212 847563 NC_000014.9 velvet.61441 99.91 True relocation, scaffold gap is present, inconsistency = -7042 78437633 78441843 847574 851950 NC_000014.9 velvet.61441 99.79 True fake: scaffold gap size wrong estimation (local) 78444956 78449391 851961 856624 NC_000014.9 velvet.61441 99.89 True fake: scaffold gap size wrong estimation (extensive) 78460460 78463321 860401 863419 NC_000014.9 velvet.61441 99.79 True relocation, scaffold gap is present, inconsistency = -7366 78457336 78460428 864800 867892 NC_000014.9 velvet.61441 99.64 True relocation, scaffold gap is present, inconsistency = -10921 78449518 78456807 867903 875192 NC_000014.9 velvet.61441 99.89 True fake: scaffold gap size wrong estimation (extensive) 78464348 78465542 875203 876397 NC_000014.9 velvet.61441 99.92 True local misassembly 78463391 78464062 876408 877067 NC_000014.9 velvet.61441 97.89 True fake: scaffold gap size wrong estimation (local) 78466126 78467939 879916 881729 NC_000014.9 velvet.61441 99.83 True fake: scaffold gap size wrong estimation (local) 78468125 78472931 882747 887652 NC_000014.9 velvet.61441 99.96 True fake: scaffold gap size wrong estimation (local) 78473423 78479892 888920 895409 NC_000014.9 velvet.61441 99.57 True fake: scaffold gap size wrong estimation (extensive) 78487799 78489929 895420 897550 NC_000014.9 velvet.61441 99.91 True fake: scaffold gap size wrong estimation (local) 78490252 78491387 898594 899729 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78495172 78498808 904504 908131 NC_000014.9 velvet.61441 99.62 True fake: scaffold gap size wrong estimation (local) 78498892 78505803 909056 916275 NC_000014.9 velvet.61441 99.87 True fake: scaffold gap size wrong estimation (local) 78505828 78506394 916899 917465 NC_000014.9 velvet.61441 100.0 True fake: not a misassembly (possible transposable element) 78506661 78510021 920814 917476 NC_000014.9 velvet.61441 99.23 True fake: not a misassembly (possible transposable element) 78510079 78523542 920825 934288 NC_000014.9 velvet.61441 99.96 True fake: scaffold gap size wrong estimation (local) 78523854 78532051 935386 944122 NC_000014.9 velvet.61441 99.79 True fake: scaffold gap size wrong estimation (local) 78532424 78533106 945027 945709 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78533349 78535153 946333 948137 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 38932 78493542 78494406 949012 948148 NC_000014.9 velvet.61441 98.73 True fake: scaffold gap size wrong estimation (local) 78491389 78493242 950954 949101 NC_000014.9 velvet.61441 99.95 True fake: scaffold gap size wrong estimation (local) 78480119 78487462 958739 951085 NC_000014.9 velvet.61441 99.86 True relocation, scaffold gap is present, inconsistency = 47686 78535172 78536634 958763 960225 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78547460 78550049 965942 968531 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -7406 78542660 78547241 968548 973130 NC_000014.9 velvet.61441 99.91 True fake: scaffold gap size wrong estimation (local) 78550210 78552858 973141 975755 NC_000014.9 velvet.61441 98.64 True relocation, scaffold gap is present, inconsistency = -20453 78557263 78562154 1000613 1005504 NC_000014.9 velvet.61441 99.94 True fake: scaffold gap size wrong estimation (local) 78569886 78573219 1006337 1009660 NC_000014.9 velvet.61441 99.7 True relocation, scaffold gap is present, inconsistency = -20362 78552868 78557190 1009671 1013993 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -27807273 50749985 50751659 1014061 1015735 NC_000014.9 velvet.61441 99.76 True fake: scaffold gap size wrong estimation (local) 50751827 50753148 1016078 1017439 NC_000014.9 velvet.61441 99.84 True fake: scaffold gap size wrong estimation (local) 50753407 50755670 1018403 1020666 NC_000014.9 velvet.61441 99.91 True relocation, scaffold gap is present, inconsistency = 27805488 78562428 78568984 1021936 1028666 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78575209 78577514 1033911 1036216 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78577727 78590682 1037203 1050158 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78602296 78604242 1055115 1057054 NC_000014.9 velvet.61441 99.54 True relocation, scaffold gap is present, inconsistency = -13432 78590821 78601483 1057065 1067727 NC_000014.9 velvet.61441 99.97 True fake: scaffold gap size wrong estimation (local) 78601757 78602288 1068743 1069274 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78604334 78615347 1069286 1080450 NC_000014.9 velvet.61441 99.95 True fake: scaffold gap size wrong estimation (local) 78615631 78619544 1081495 1087596 NC_000014.9 velvet.61441 98.14 True fake: scaffold gap size wrong estimation (local) 78619650 78622433 1087781 1090594 NC_000014.9 velvet.61441 98.86 True fake: scaffold gap size wrong estimation (local) 78627150 78628136 1090605 1091591 NC_000014.9 velvet.61441 99.9 True local misassembly 78622441 78623587 1091602 1092748 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78628301 78630606 1092759 1095064 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78630894 78631852 1095897 1096855 NC_000014.9 velvet.61441 99.9 True relocation, scaffold gap is present, inconsistency = -8017 78623846 78624830 1096866 1097850 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78625138 78627130 1099233 1101225 NC_000014.9 velvet.61441 99.95 True fake: scaffold gap size wrong estimation (local) 78632149 78632993 1101236 1102080 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78633275 78643888 1103428 1114170 NC_000014.9 velvet.61441 99.96 True fake: scaffold gap size wrong estimation (local) 78644153 78649465 1114925 1120788 NC_000014.9 velvet.61441 99.96 True fake: scaffold gap size wrong estimation (local) 78649596 78651756 1121598 1123754 NC_000014.9 velvet.61441 99.58 True fake: scaffold gap size wrong estimation (local) 78651912 78656800 1124633 1129602 NC_000014.9 velvet.61441 98.33 True fake: scaffold gap size wrong estimation (local) 78657082 78661904 1130633 1135480 NC_000014.9 velvet.61441 99.42 True fake: scaffold gap size wrong estimation (local) 78662167 78665224 1136493 1139550 NC_000014.9 velvet.61441 99.97 True fake: scaffold gap size wrong estimation (local) 78665433 78667825 1140511 1142943 NC_000014.9 velvet.61441 98.27 True fake: scaffold gap size wrong estimation (local) 78667962 78669969 1143732 1145837 NC_000014.9 velvet.61441 96.84 True fake: scaffold gap size wrong estimation (extensive) 78677458 78680111 1145848 1148565 NC_000014.9 velvet.61441 99.85 True fake: scaffold gap size wrong estimation (local) 78680201 78681963 1148717 1150479 NC_000014.9 velvet.61441 99.94 True fake: scaffold gap size wrong estimation (local) 78684708 78685647 1154674 1155613 NC_000014.9 velvet.61441 99.89 True fake: scaffold gap size wrong estimation (local) 78693117 78700799 1167321 1175061 NC_000014.9 velvet.61441 99.93 True fake: scaffold gap size wrong estimation (extensive) 78707915 78711451 1175072 1178609 NC_000014.9 velvet.61441 99.66 True fake: scaffold gap size wrong estimation (local) 78711742 78712695 1179655 1180608 NC_000014.9 velvet.61441 99.9 True relocation, scaffold gap is present, inconsistency = -11633 78701073 78702304 1180619 1181850 NC_000014.9 velvet.61441 99.92 True fake: scaffold gap size wrong estimation (local) 78702725 78707683 1183130 1188088 NC_000014.9 velvet.61441 99.76 True relocation, scaffold gap is present, inconsistency = -33507399 45201444 45202896 1189248 1190700 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 45203011 45206323 1191360 1194673 NC_000014.9 velvet.61441 99.97 True fake: scaffold gap size wrong estimation (local) 45206505 45207421 1195518 1196434 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -14940 45192658 45194045 1196611 1197950 NC_000014.9 velvet.61441 96.52 True fake: scaffold gap size wrong estimation (local) 45194327 45194846 1198082 1198601 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 45195042 45197481 1199657 1202096 NC_000014.9 velvet.61441 99.96 True fake: scaffold gap size wrong estimation (local) 45198047 45200931 1203472 1206356 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 45207578 45208348 1206367 1207137 NC_000014.9 velvet.61441 99.87 True fake: scaffold gap size wrong estimation (local) 45208633 45214441 1208079 1213943 NC_000014.9 velvet.61441 99.55 True fake: not a misassembly (possible transposable element) 55696360 55696923 1243400 1242837 NC_000014.9 velvet.61441 100.0 True fake: not a misassembly (possible transposable element) 45245622 45247599 1243760 1245737 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 45248370 45248964 1247463 1248057 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -21767 45228164 45229275 1249024 1250135 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 45229535 45230857 1250803 1252125 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -9926 45221472 45223335 1252666 1254524 NC_000014.9 velvet.61441 99.73 True fake: scaffold gap size wrong estimation (extensive) 45230910 45232173 1254636 1255899 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -8661 45223523 45227260 1255910 1259647 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 45232670 45234981 1264586 1266888 NC_000014.9 velvet.61441 99.61 True fake: scaffold gap size wrong estimation (local) 45235622 45238595 1268297 1271324 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 45238757 45240747 1272373 1274363 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 33523969 78765771 78773838 1275418 1283485 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78774102 78777770 1284521 1288187 NC_000014.9 velvet.61441 99.92 True fake: scaffold gap size wrong estimation (local) 78778065 78778700 1289409 1290044 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 23063898 55706817 55714071 1297394 1290140 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 55701267 55703424 1300042 1297885 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 23075402 78778837 78792280 1300053 1313588 NC_000014.9 velvet.61441 99.96 True relocation, scaffold gap is present, inconsistency = -9091059 69701239 69705069 1313606 1317436 NC_000014.9 velvet.61441 99.97 True relocation, scaffold gap is present, inconsistency = -24435041 45270039 45272187 1317447 1319595 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (extensive) 45280415 45281354 1319606 1320576 NC_000014.9 velvet.61441 96.5 True relocation, scaffold gap is present, inconsistency = 33513641 78795006 78798076 1320587 1323659 NC_000014.9 velvet.61441 99.41 True relocation, scaffold gap is present, inconsistency = -33529749 45272549 45273738 1327881 1329070 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (extensive) 45282871 45283514 1329081 1329724 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 45283783 45287183 1330600 1334000 NC_000014.9 velvet.61441 99.97 True fake: scaffold gap size wrong estimation (local) 45287446 45288905 1335000 1336459 NC_000014.9 velvet.61441 99.93 True fake: scaffold gap size wrong estimation (local) 45289230 45289931 1336918 1337619 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 33522210 78813546 78814378 1339024 1339856 NC_000014.9 velvet.61441 99.88 True fake: scaffold gap size wrong estimation (local) 78814636 78822437 1340510 1348443 NC_000014.9 velvet.61441 99.85 True fake: scaffold gap size wrong estimation (local) 78822743 78825148 1349571 1352019 NC_000014.9 velvet.61441 99.83 True fake: scaffold gap size wrong estimation (local) 78825238 78831310 1352923 1359085 NC_000014.9 velvet.61441 99.95 True relocation, scaffold gap is present, inconsistency = 33554863 45268377 45269719 1361138 1359741 NC_000014.9 velvet.61441 99.92 True fake: scaffold gap size wrong estimation (local) 45266380 45268114 1364510 1361564 NC_000014.9 velvet.61441 99.94 True fake: scaffold gap size wrong estimation (local) 45264372 45265908 1366056 1364521 NC_000014.9 velvet.61441 99.93 True fake: scaffold gap size wrong estimation (local) 45263129 45263838 1367812 1367103 NC_000014.9 velvet.61441 99.44 True fake: scaffold gap size wrong estimation (local) 45251037 45262828 1382346 1368358 NC_000014.9 velvet.61441 98.75 True fake: scaffold gap size wrong estimation (local) 45249804 45250738 1384113 1383179 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 45217709 45220861 1412049 1408897 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 45215971 45217605 1413950 1412316 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -39524657 84736244 84739453 1418334 1415125 NC_000014.9 velvet.61441 99.94 True fake: scaffold gap size wrong estimation (local) 84731957 84735951 1423395 1419400 NC_000014.9 velvet.61441 99.92 True relocation, scaffold gap is present, inconsistency = 5889699 78831570 78842247 1423406 1434082 NC_000014.9 velvet.61441 99.89 True relocation, scaffold gap is present, inconsistency = 12936 78855194 78856826 1434093 1435725 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 26331 78883168 78895396 1448572 1435736 NC_000014.9 velvet.61441 99.22 True relocation, scaffold gap is present, inconsistency = 16166 78857018 78866817 1448757 1458547 NC_000014.9 velvet.61441 99.87 True fake: scaffold gap size wrong estimation (local) 78867080 78868575 1459365 1460849 NC_000014.9 velvet.61441 99.24 True fake: scaffold gap size wrong estimation (local) 78868858 78873989 1461731 1466862 NC_000014.9 velvet.61441 99.9 True fake: scaffold gap size wrong estimation (local) 78874272 78879981 1467869 1473578 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78880271 78882719 1474749 1477187 NC_000014.9 velvet.61441 98.77 True fake: scaffold gap size wrong estimation (local) 78895428 78903163 1485132 1493157 NC_000014.9 velvet.61441 99.7 True fake: scaffold gap size wrong estimation (local) 78903236 78908004 1493278 1498741 NC_000014.9 velvet.61441 99.94 True fake: scaffold gap size wrong estimation (local) 78908086 78911952 1499611 1503477 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78912256 78913267 1504316 1505327 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78913569 78917969 1506066 1510560 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78918337 78922631 1511754 1516048 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78922853 78923990 1516382 1517519 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78924260 78926484 1518515 1520739 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78927101 78928334 1522190 1523423 NC_000014.9 velvet.61441 99.92 True fake: scaffold gap size wrong estimation (local) 78934989 78936977 1523434 1525422 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78937217 78938862 1526169 1527814 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -10821 78929579 78931892 1529352 1531726 NC_000014.9 velvet.61441 97.31 True fake: scaffold gap size wrong estimation (local) 78932144 78934659 1532737 1535252 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78939150 78943622 1535263 1539735 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78943707 78954505 1540570 1551483 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78954797 78958372 1552539 1556114 NC_000014.9 velvet.61441 99.97 True fake: scaffold gap size wrong estimation (local) 78958655 78962770 1557142 1561257 NC_000014.9 velvet.61441 99.98 True fake: scaffold gap size wrong estimation (local) 78962974 78968061 1561873 1567491 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78998892 79002339 1597306 1600753 NC_000014.9 velvet.61441 99.97 True relocation, scaffold gap is present, inconsistency = 3811566 82816632 82820006 1606928 1603480 NC_000014.9 velvet.61441 96.68 True fake: scaffold gap size wrong estimation (local) 82815535 82816366 1608886 1608055 NC_000014.9 velvet.61441 100.0 True inversion, scaffold gap is present 82798314 82807613 1616161 1625522 NC_000014.9 velvet.61441 99.33 True fake: scaffold gap size wrong estimation (local) 82807699 82812456 1626333 1630898 NC_000014.9 velvet.61441 95.96 True fake: scaffold gap size wrong estimation (local) 82813480 82814074 1632876 1633473 NC_000014.9 velvet.61441 96.99 True relocation, scaffold gap is present, inconsistency = 26439 82784601 82787030 1635972 1633484 NC_000014.9 velvet.61441 99.96 True fake: scaffold gap size wrong estimation (local) 82781118 82784439 1640161 1636840 NC_000014.9 velvet.61441 99.94 True fake: scaffold gap size wrong estimation (local) 82773302 82780822 1649038 1640900 NC_000014.9 velvet.61441 99.91 True fake: scaffold gap size wrong estimation (local) 82770679 82772061 1652413 1651092 NC_000014.9 velvet.61441 95.48 True fake: scaffold gap size wrong estimation (local) 82763308 82770481 1660419 1653525 NC_000014.9 velvet.61441 96.05 True relocation, scaffold gap is present, inconsistency = -9725 82772093 82773022 1661359 1660430 NC_000014.9 velvet.61441 99.78 True relocation, scaffold gap is present, inconsistency = 3800401 78969865 78971681 1661370 1663165 NC_000014.9 velvet.61441 98.84 True fake: not a misassembly (possible transposable element) 32939624 32941195 1664747 1663176 NC_000014.9 velvet.61441 99.94 True fake: not a misassembly (possible transposable element) 78971904 78979695 1664760 1672551 NC_000014.9 velvet.61441 100.0 True local misassembly 78983895 78986775 1672552 1675432 NC_000014.9 velvet.61441 99.65 True fake: scaffold gap size wrong estimation (local) 78987054 78990384 1676481 1679811 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78990652 78993858 1680796 1684002 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 78994156 78998643 1685131 1689618 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 3677597 82676275 82679723 1689653 1693101 NC_000014.9 velvet.61441 99.97 True fake: scaffold gap size wrong estimation (local) 82679969 82681064 1693896 1694991 NC_000014.9 velvet.61441 99.91 True fake: scaffold gap size wrong estimation (local) 82681493 82683353 1695999 1697859 NC_000014.9 velvet.61441 99.41 True fake: scaffold gap size wrong estimation (local) 82683820 82686890 1701352 1704422 NC_000014.9 velvet.61441 99.77 True fake: scaffold gap size wrong estimation (local) 82686891 82690347 1706806 1710262 NC_000014.9 velvet.61441 99.57 True fake: scaffold gap size wrong estimation (local) 82690348 82691651 1711082 1712385 NC_000014.9 velvet.61441 98.24 True fake: scaffold gap size wrong estimation (local) 82691652 82694294 1712465 1715107 NC_000014.9 velvet.61441 99.43 True relocation, scaffold gap is present, inconsistency = 46643 82742947 82746691 1720867 1717117 NC_000014.9 velvet.61441 99.76 True fake: scaffold gap size wrong estimation (local) 82738778 82742621 1726004 1721601 NC_000014.9 velvet.61441 99.71 True fake: scaffold gap size wrong estimation (local) 82735808 82737958 1729883 1727735 NC_000014.9 velvet.61441 99.72 True fake: scaffold gap size wrong estimation (local) 82734013 82735514 1732569 1731083 NC_000014.9 velvet.61441 98.79 True fake: scaffold gap size wrong estimation (local) 82733164 82733868 1733419 1732716 NC_000014.9 velvet.61441 98.87 True fake: scaffold gap size wrong estimation (local) 82731364 82732813 1735822 1734368 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 3711199 79018307 79020154 1735833 1737680 NC_000014.9 velvet.61441 99.95 True fake: scaffold gap size wrong estimation (local) 79020567 79023124 1738651 1741289 NC_000014.9 velvet.61441 96.93 True relocation, scaffold gap is present, inconsistency = -25761238 53264167 53265590 1743570 1744993 NC_000014.9 velvet.61441 99.86 True local misassembly 53262346 53264093 1745004 1746758 NC_000014.9 velvet.61441 99.66 True relocation, scaffold gap is present, inconsistency = 29438611 82702715 82707552 1746769 1751700 NC_000014.9 velvet.61441 99.17 True fake: scaffold gap size wrong estimation (local) 82707707 82714557 1752548 1759459 NC_000014.9 velvet.61441 99.97 True fake: scaffold gap size wrong estimation (local) 82714703 82721824 1760286 1767508 NC_000014.9 velvet.61441 98.95 True fake: scaffold gap size wrong estimation (local) 82722098 82731373 1768501 1777777 NC_000014.9 velvet.61441 99.86 True relocation, scaffold gap is present, inconsistency = -3702111 79030146 79039936 1778661 1788516 NC_000014.9 velvet.61441 99.15 True fake: scaffold gap size wrong estimation (local) 79040783 79044839 1789865 1794092 NC_000014.9 velvet.61441 96.59 True relocation, scaffold gap is present, inconsistency = 49186900 29849578 29851839 1798454 1796136 NC_000014.9 velvet.61441 98.46 True fake: scaffold gap size wrong estimation (local) 29813088 29815935 1832124 1829277 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 29808660 29812756 1837343 1833247 NC_000014.9 velvet.61441 99.9 True fake: scaffold gap size wrong estimation (local) 29807850 29808367 1838669 1838152 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -27698 29804238 29807461 1870051 1866756 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 29801954 29803950 1873064 1871068 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 29790246 29801695 1885637 1874188 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 29789055 29789999 1887427 1886483 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 29785932 29788935 1890977 1887912 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 29784448 29785627 1892607 1891433 NC_000014.9 velvet.61441 99.58 True fake: scaffold gap size wrong estimation (local) 29781247 29784312 1896206 1893129 NC_000014.9 velvet.61441 98.22 True fake: scaffold gap size wrong estimation (local) 29748014 29760343 1927446 1915117 NC_000014.9 velvet.61441 99.98 True relocation, scaffold gap is present, inconsistency = 70221007 99981361 99984677 1927457 1930773 NC_000014.9 velvet.61441 99.94 True fake: scaffold gap size wrong estimation (local) 99984869 99985511 1931822 1932464 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 99988218 99988832 1936033 1936647 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -2270841 97718002 97720619 1936658 1939376 NC_000014.9 velvet.61441 99.92 True relocation, scaffold gap is present, inconsistency = 59142129 38549062 38552070 1966187 1963179 NC_000014.9 velvet.61441 99.9 True relocation, scaffold gap is present, inconsistency = 15539070 23008186 23009657 1966522 1967993 NC_000014.9 velvet.61441 100.0 True local misassembly 23005438 23007894 1968004 1970460 NC_000014.9 velvet.61441 99.92 True relocation, scaffold gap is present, inconsistency = 74746074 97753979 97761240 1970471 1977732 NC_000014.9 velvet.61441 99.86 True fake: not a misassembly (possible transposable element) 23009683 23010806 1977743 1978866 NC_000014.9 velvet.61441 100.0 True fake: not a misassembly (possible transposable element) 97761523 97767279 1981566 1987322 NC_000014.9 velvet.61441 99.98 True relocation, scaffold gap is present, inconsistency = 26980031 70778550 70781481 1990264 1987333 NC_000014.9 velvet.61441 99.93 True relocation, scaffold gap is present, inconsistency = 27297593 98079085 98085706 1990275 1996896 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 59538337 38534654 38540737 2002988 1996907 NC_000014.9 velvet.61441 99.93 True fake: scaffold gap size wrong estimation (local) 38532370 38534364 2005806 2003720 NC_000014.9 velvet.61441 97.48 True fake: scaffold gap size wrong estimation (local) 38530666 38532240 2007995 2006421 NC_000014.9 velvet.61441 99.94 True fake: scaffold gap size wrong estimation (local) 38518857 38530359 2020503 2008977 NC_000014.9 velvet.61441 99.44 True fake: scaffold gap size wrong estimation (local) 38503871 38508255 2034158 2029774 NC_000014.9 velvet.61441 98.81 True fake: scaffold gap size wrong estimation (local) 38499998 38503870 2038588 2034716 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 38498535 38499762 2040035 2038808 NC_000014.9 velvet.61441 97.56 True fake: scaffold gap size wrong estimation (local) 38496816 38498534 2042584 2040866 NC_000014.9 velvet.61441 99.42 True fake: scaffold gap size wrong estimation (local) 38494327 38496815 2046557 2044069 NC_000014.9 velvet.61441 99.56 True fake: scaffold gap size wrong estimation (local) 38492328 38493985 2049344 2047687 NC_000014.9 velvet.61441 99.94 True relocation, scaffold gap is present, inconsistency = 61498199 99992195 99993074 2049355 2050234 NC_000014.9 velvet.61441 100.0 True fake: not a misassembly (possible transposable element) 29710695 29713332 2068218 2065581 NC_000014.9 velvet.61441 99.96 True fake: not a misassembly (possible transposable element) 100016614 100022292 2068229 2074064 NC_000014.9 velvet.61441 99.91 True relocation, scaffold gap is present, inconsistency = 61499302 38514832 38517301 2076544 2074075 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 38511198 38514743 2080341 2076796 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 61513894 100028818 100030107 2080522 2081811 NC_000014.9 velvet.61441 99.92 True fake: scaffold gap size wrong estimation (local) 100030404 100033973 2082876 2087006 NC_000014.9 velvet.61441 99.97 True fake: scaffold gap size wrong estimation (local) 100055228 100055816 2113831 2114419 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 100056112 100060058 2115279 2119225 NC_000014.9 velvet.61441 99.95 True fake: scaffold gap size wrong estimation (local) 100060451 100060985 2120315 2120849 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 100061495 100062846 2121494 2122824 NC_000014.9 velvet.61441 98.21 True relocation, scaffold gap is present, inconsistency = 70381774 29677830 29679710 2124715 2122835 NC_000014.9 velvet.61441 99.95 True relocation, scaffold gap is present, inconsistency = 70369119 100051049 100052509 2126935 2128395 NC_000014.9 velvet.61441 99.93 True fake: scaffold gap size wrong estimation (local) 100062902 100064657 2133239 2134991 NC_000014.9 velvet.61441 99.72 True fake: scaffold gap size wrong estimation (local) 100064898 100069983 2135990 2141079 NC_000014.9 velvet.61441 99.67 True fake: scaffold gap size wrong estimation (local) 100070096 100072349 2141879 2144200 NC_000014.9 velvet.61441 96.86 True fake: scaffold gap size wrong estimation (local) 100072517 100077813 2144921 2150456 NC_000014.9 velvet.61441 99.94 True fake: scaffold gap size wrong estimation (local) 100078077 100081845 2151507 2155230 NC_000014.9 velvet.61441 97.52 True fake: scaffold gap size wrong estimation (local) 100082146 100083429 2156123 2157406 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 100083478 100084066 2158144 2158732 NC_000014.9 velvet.61441 100.0 True local misassembly 100084246 100085872 2158733 2160359 NC_000014.9 velvet.61441 99.39 True inversion, scaffold gap is present 100092721 100094464 2162113 2160370 NC_000014.9 velvet.61441 99.43 True local misassembly 100087486 100089850 2164478 2162114 NC_000014.9 velvet.61441 99.92 True fake: not a misassembly (possible transposable element) 100089881 100092017 2164489 2166610 NC_000014.9 velvet.61441 99.29 True fake: not a misassembly (possible transposable element) 100086095 100087337 2167863 2166621 NC_000014.9 velvet.61441 100.0 True inversion, scaffold gap is present 100095070 100095748 2171494 2172172 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 100096030 100099740 2172972 2176720 NC_000014.9 velvet.61441 99.97 True fake: scaffold gap size wrong estimation (local) 100099884 100100692 2177819 2178617 NC_000014.9 velvet.61441 98.75 True fake: scaffold gap size wrong estimation (local) 100102105 100102842 2180052 2180789 NC_000014.9 velvet.61441 98.64 True fake: scaffold gap size wrong estimation (local) 100103221 100104925 2181898 2183602 NC_000014.9 velvet.61441 99.94 True relocation, scaffold gap is present, inconsistency = 46843943 53257353 53258469 2185530 2184411 NC_000014.9 velvet.61441 99.91 True fake: scaffold gap size wrong estimation (local) 53254976 53255758 2189610 2188828 NC_000014.9 velvet.61441 98.72 True relocation, scaffold gap is present, inconsistency = -7818 53259432 53261858 2193017 2190546 NC_000014.9 velvet.61441 99.88 True relocation, scaffold gap is present, inconsistency = -29440946 82695623 82700367 2197772 2193028 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 11390875 71302916 71303438 2199082 2199604 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 71304615 71309576 2201660 2206621 NC_000014.9 velvet.61441 99.9 True fake: scaffold gap size wrong estimation (local) 71312525 71313981 2206991 2208447 NC_000014.9 velvet.61441 100.0 True local misassembly 71309832 71311672 2208458 2210285 NC_000014.9 velvet.61441 99.24 True fake: scaffold gap size wrong estimation (local) 71314572 71315581 2210296 2211305 NC_000014.9 velvet.61441 100.0 True fake: not a misassembly (possible transposable element) 53233152 53233788 2213506 2212870 NC_000014.9 velvet.61441 100.0 True fake: not a misassembly (possible transposable element) 71315775 71318238 2213517 2215980 NC_000014.9 velvet.61441 99.96 True relocation, scaffold gap is present, inconsistency = 18083263 53230277 53232019 2218215 2216473 NC_000014.9 velvet.61441 99.37 True fake: scaffold gap size wrong estimation (local) 53223823 53229570 2225603 2219848 NC_000014.9 velvet.61441 99.88 True relocation, scaffold gap is present, inconsistency = -18207438 71428266 71429384 2228598 2227480 NC_000014.9 velvet.61441 99.91 True fake: scaffold gap size wrong estimation (local) 71426744 71427988 2230002 2228758 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 28676871 100104938 100110132 2230081 2235275 NC_000014.9 velvet.61441 99.98 True relocation, scaffold gap is present, inconsistency = -28791148 71318995 71326225 2235286 2242516 NC_000014.9 velvet.61441 99.94 True fake: scaffold gap size wrong estimation (local) 71327370 71329432 2244453 2246471 NC_000014.9 velvet.61441 97.87 True fake: scaffold gap size wrong estimation (local) 71329585 71335043 2247465 2252923 NC_000014.9 velvet.61441 99.98 True fake: scaffold gap size wrong estimation (local) 71335316 71337343 2253930 2255957 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 71337850 71338751 2257001 2257902 NC_000014.9 velvet.61441 99.89 True fake: scaffold gap size wrong estimation (local) 71339602 71340771 2259268 2260437 NC_000014.9 velvet.61441 99.91 True fake: not a misassembly (possible transposable element) 71421502 71426471 2265418 2260448 NC_000014.9 velvet.61441 99.98 True fake: not a misassembly (possible transposable element) 71340950 71345600 2265429 2270075 NC_000014.9 velvet.61441 99.85 True relocation, scaffold gap is present, inconsistency = 28794785 100140588 100147670 2270278 2277360 NC_000014.9 velvet.61441 99.96 True fake: scaffold gap size wrong estimation (local) 100147918 100154111 2278424 2285225 NC_000014.9 velvet.61441 99.26 True fake: scaffold gap size wrong estimation (local) 100154387 100157833 2286055 2289501 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 100158245 100161815 2290199 2294359 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 100162563 100163190 2296064 2296691 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 28775600 71381326 71385675 2302328 2297979 NC_000014.9 velvet.61441 99.95 True fake: scaffold gap size wrong estimation (local) 71377917 71381065 2307117 2303344 NC_000014.9 velvet.61441 99.39 True relocation, scaffold gap is present, inconsistency = 34120462 105504242 105504790 2309832 2310380 NC_000014.9 velvet.61441 100.0 True local misassembly 105505056 105506000 2310381 2311325 NC_000014.9 velvet.61441 98.52 True local misassembly 105502328 105504207 2312499 2314378 NC_000014.9 velvet.61441 99.73 True fake: scaffold gap size wrong estimation (local) 105507263 105507923 2314389 2315049 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 105507924 105508561 2315095 2315732 NC_000014.9 velvet.61441 96.55 True local misassembly 105508786 105509534 2315733 2316481 NC_000014.9 velvet.61441 98.66 True fake: scaffold gap size wrong estimation (extensive) 105511741 105512370 2325695 2326324 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 105517001 105517630 2332462 2333091 NC_000014.9 velvet.61441 100.0 True inversion, scaffold gap is present 105519880 105520682 2333904 2333102 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 105517857 105518633 2337120 2336344 NC_000014.9 velvet.61441 100.0 True fake: not a misassembly (possible transposable element) 105512505 105514005 2337131 2338579 NC_000014.9 velvet.61441 96.51 True fake: not a misassembly (possible transposable element) 105515401 105516689 2340560 2339272 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 26450487 79059560 79063304 2342170 2345914 NC_000014.9 velvet.61441 99.79 True fake: scaffold gap size wrong estimation (local) 79063527 79066005 2346902 2349491 NC_000014.9 velvet.61441 99.71 True fake: scaffold gap size wrong estimation (local) 79067400 79071224 2352325 2356283 NC_000014.9 velvet.61441 98.59 True fake: scaffold gap size wrong estimation (local) 79071382 79072898 2356904 2358420 NC_000014.9 velvet.61441 99.8 True fake: scaffold gap size wrong estimation (local) 79073189 79079752 2359339 2365906 NC_000014.9 velvet.61441 99.83 True fake: scaffold gap size wrong estimation (local) 79079998 79081360 2366909 2368271 NC_000014.9 velvet.61441 99.85 True fake: scaffold gap size wrong estimation (local) 79081625 79082416 2368676 2369467 NC_000014.9 velvet.61441 98.74 True fake: scaffold gap size wrong estimation (local) 79112004 79114407 2398110 2400513 NC_000014.9 velvet.61441 99.96 True relocation, scaffold gap is present, inconsistency = -19819960 59310435 59310978 2416501 2417044 NC_000014.9 velvet.61441 99.82 True relocation, scaffold gap is present, inconsistency = 8753945 50555554 50556309 2417980 2417225 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 8767719 59324039 59327425 2417991 2421377 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 4025586 63353022 63354673 2421388 2423039 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 16032 63370716 63376913 2423050 2430014 NC_000014.9 velvet.61441 99.98 True fake: not a misassembly (possible transposable element) 63399506 63403174 2439853 2443579 NC_000014.9 velvet.61441 99.67 True fake: not a misassembly (possible transposable element) 63389163 63391427 2444420 2446729 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 12867708 50517606 50519373 2450640 2448811 NC_000014.9 velvet.61441 98.27 True fake: scaffold gap size wrong estimation (local) 50515160 50517138 2454011 2452033 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 50514344 50514901 2454826 2454270 NC_000014.9 velvet.61441 99.46 True fake: scaffold gap size wrong estimation (local) 50509687 50514099 2460211 2455801 NC_000014.9 velvet.61441 99.82 True relocation, scaffold gap is present, inconsistency = 12917948 63432071 63433040 2460235 2461204 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63433267 63439365 2462203 2468301 NC_000014.9 velvet.61441 99.93 True fake: scaffold gap size wrong estimation (local) 63439679 63440690 2469028 2470039 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -23951 63416750 63418861 2470050 2472266 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63419007 63420796 2472865 2474654 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63421096 63422472 2475532 2476908 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63423401 63424496 2478188 2479283 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63440979 63441663 2491165 2491849 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63441927 63445604 2492828 2496505 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63445875 63446576 2497725 2498426 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63448818 63449892 2501462 2502536 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63450176 63455890 2503212 2508986 NC_000014.9 velvet.61441 99.98 True fake: scaffold gap size wrong estimation (local) 63456064 63462846 2510020 2517345 NC_000014.9 velvet.61441 96.42 True fake: scaffold gap size wrong estimation (local) 63463897 63464766 2518801 2519670 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63470755 63472131 2522396 2523766 NC_000014.9 velvet.61441 99.49 True fake: scaffold gap size wrong estimation (local) 63472295 63474573 2524522 2526800 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63474715 63478868 2527666 2531819 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63479133 63480203 2532999 2534069 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63480464 63481242 2534242 2535020 NC_000014.9 velvet.61441 99.87 True fake: scaffold gap size wrong estimation (local) 63481525 63482221 2536291 2536987 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63483134 63483831 2536998 2537695 NC_000014.9 velvet.61441 100.0 True local misassembly 63482450 63483087 2537706 2538343 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63484393 63485215 2540840 2541662 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63486125 63488214 2542826 2544995 NC_000014.9 velvet.61441 96.18 True fake: scaffold gap size wrong estimation (extensive) 63488844 63489428 2554311 2554895 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63490485 63491626 2556125 2557268 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63491833 63494263 2558283 2560758 NC_000014.9 velvet.61441 99.96 True fake: scaffold gap size wrong estimation (extensive) 63501437 63502427 2560769 2561763 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63502681 63504325 2564191 2565788 NC_000014.9 velvet.61441 97.13 True fake: scaffold gap size wrong estimation (local) 63505292 63506198 2567302 2568208 NC_000014.9 velvet.61441 98.79 True fake: scaffold gap size wrong estimation (local) 63506465 63507539 2568879 2569953 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63507877 63509291 2570553 2571967 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63509557 63511837 2572955 2575235 NC_000014.9 velvet.61441 99.96 True fake: scaffold gap size wrong estimation (local) 63512115 63515547 2576259 2580101 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63516151 63518963 2581246 2584058 NC_000014.9 velvet.61441 99.96 True fake: scaffold gap size wrong estimation (local) 63523775 63525925 2590334 2592484 NC_000014.9 velvet.61441 99.95 True fake: scaffold gap size wrong estimation (local) 63529679 63530248 2597506 2598075 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63531947 63532893 2600247 2601193 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63533954 63534703 2603034 2603749 NC_000014.9 velvet.61441 95.14 True fake: scaffold gap size wrong estimation (local) 63535438 63538299 2604989 2607850 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63538891 63539872 2609225 2610206 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63540754 63545718 2611650 2616822 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63546397 63546980 2618276 2618859 NC_000014.9 velvet.61441 98.29 True fake: scaffold gap size wrong estimation (local) 63547249 63547771 2619264 2619786 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -32223130 31334065 31334722 2629210 2629866 NC_000014.9 velvet.61441 99.85 True fake: scaffold gap size wrong estimation (local) 31336380 31338896 2633096 2635613 NC_000014.9 velvet.61441 99.84 True fake: scaffold gap size wrong estimation (local) 31339483 31343118 2636990 2640626 NC_000014.9 velvet.61441 99.89 True fake: scaffold gap size wrong estimation (local) 31348419 31349160 2640637 2641378 NC_000014.9 velvet.61441 99.73 True local misassembly 31349380 31350785 2641379 2642784 NC_000014.9 velvet.61441 98.72 True fake: scaffold gap size wrong estimation (local) 31351727 31352731 2646864 2647868 NC_000014.9 velvet.61441 100.0 True local misassembly 31352983 31353719 2647869 2648605 NC_000014.9 velvet.61441 98.64 True relocation, scaffold gap is present, inconsistency = 32194119 63547849 63548374 2648616 2649141 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -32226855 31343372 31344149 2670994 2671771 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 31344870 31348320 2673113 2676559 NC_000014.9 velvet.61441 99.71 True fake: scaffold gap size wrong estimation (local) 31355662 31356292 2677844 2678474 NC_000014.9 velvet.61441 99.84 True fake: not a misassembly (possible transposable element) 63581788 63582341 2678485 2679038 NC_000014.9 velvet.61441 100.0 True fake: not a misassembly (possible transposable element) 31357960 31359283 2679603 2680926 NC_000014.9 velvet.61441 99.92 True relocation, scaffold gap is present, inconsistency = 32224161 63583928 63584525 2681410 2682007 NC_000014.9 velvet.61441 98.33 True fake: scaffold gap size wrong estimation (local) 63584526 63585036 2682041 2682551 NC_000014.9 velvet.61441 95.11 True fake: not a misassembly (possible transposable element) 31354136 31355155 2682950 2683969 NC_000014.9 velvet.61441 99.61 True fake: not a misassembly (possible transposable element) 63579856 63581766 2684000 2685910 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -32225397 31356380 31357958 2685921 2687499 NC_000014.9 velvet.61441 99.94 True relocation, scaffold gap is present, inconsistency = 72146785 103504754 103505728 2687510 2688484 NC_000014.9 velvet.61441 99.9 True fake: scaffold gap size wrong estimation (local) 103506030 103506540 2689437 2689947 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 39926352 63578170 63578824 2691455 2690801 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 63576001 63576583 2694710 2694128 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 39937957 103516222 103521842 2696392 2702012 NC_000014.9 velvet.61441 99.86 True relocation, scaffold gap is present, inconsistency = -72158577 31363880 31364639 2702627 2703386 NC_000014.9 velvet.61441 99.08 True fake: scaffold gap size wrong estimation (extensive) 31399810 31400854 2730337 2731381 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 31401652 31404649 2732775 2735772 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 31405263 31406714 2737178 2738629 NC_000014.9 velvet.61441 96.56 True relocation, scaffold gap is present, inconsistency = 65614707 97021432 97030599 2738640 2747807 NC_000014.9 velvet.61441 99.95 True inversion, scaffold gap is present 97030650 97032788 2749956 2747818 NC_000014.9 velvet.61441 99.91 True relocation, scaffold gap is present, inconsistency = 21622894 75405551 75407745 2749967 2752211 NC_000014.9 velvet.61441 96.97 True relocation, scaffold gap is present, inconsistency = 21618504 97052384 97056738 2778346 2782700 NC_000014.9 velvet.61441 99.93 True fake: scaffold gap size wrong estimation (local) 97056739 97059598 2785381 2788240 NC_000014.9 velvet.61441 99.79 True fake: scaffold gap size wrong estimation (local) 97064213 97067486 2788320 2792553 NC_000014.9 velvet.61441 97.73 True fake: scaffold gap size wrong estimation (extensive) 97075470 97075977 2792564 2793071 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 97076669 97081962 2794615 2799908 NC_000014.9 velvet.61441 99.94 True relocation, scaffold gap is present, inconsistency = -41931521 55151556 55153298 2801023 2802765 NC_000014.9 velvet.61441 99.94 True fake: scaffold gap size wrong estimation (local) 55156103 55157810 2805932 2807639 NC_000014.9 velvet.61441 99.82 True relocation, scaffold gap is present, inconsistency = -22967 55135868 55136635 2808664 2809431 NC_000014.9 velvet.61441 99.87 True fake: scaffold gap size wrong estimation (local) 55157912 55159042 2828577 2829707 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 55159074 55159972 2830723 2831621 NC_000014.9 velvet.61441 99.89 True fake: scaffold gap size wrong estimation (local) 55160735 55161408 2831632 2832288 NC_000014.9 velvet.61441 97.29 True fake: scaffold gap size wrong estimation (local) 55162650 55164704 2834764 2836818 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 55164968 55166487 2837783 2839302 NC_000014.9 velvet.61441 99.87 True fake: scaffold gap size wrong estimation (local) 55167275 55168921 2840819 2842399 NC_000014.9 velvet.61441 95.91 True fake: scaffold gap size wrong estimation (local) 55169205 55169892 2842926 2843663 NC_000014.9 velvet.61441 99.27 True fake: scaffold gap size wrong estimation (local) 55170130 55172003 2844491 2846364 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 55173013 55173615 2848289 2848928 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -20512 55154052 55155082 2849877 2850907 NC_000014.9 velvet.61441 99.9 True fake: scaffold gap size wrong estimation (local) 55181113 55183467 2873454 2875808 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 16319275 71504066 71505406 2878472 2877132 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 71502520 71503864 2880816 2879472 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 71501318 71502019 2882183 2881482 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 71497252 71500724 2886935 2883463 NC_000014.9 velvet.61441 99.94 True fake: scaffold gap size wrong estimation (local) 71471438 71472339 2913622 2912721 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 71469198 71470817 2916845 2915226 NC_000014.9 velvet.61441 99.94 True fake: scaffold gap size wrong estimation (local) 71465958 71466566 2920421 2919815 NC_000014.9 velvet.61441 98.52 True fake: scaffold gap size wrong estimation (local) 71464647 71465702 2922542 2921487 NC_000014.9 velvet.61441 99.81 True fake: scaffold gap size wrong estimation (local) 71463639 71464428 2923461 2922672 NC_000014.9 velvet.61441 99.11 True fake: scaffold gap size wrong estimation (local) 71461979 71463033 2925483 2924429 NC_000014.9 velvet.61441 99.43 True fake: scaffold gap size wrong estimation (local) 71461119 71461656 2926237 2925700 NC_000014.9 velvet.61441 97.96 True local misassembly 71459925 71460811 2927124 2926238 NC_000014.9 velvet.61441 98.65 True fake: scaffold gap size wrong estimation (local) 71457871 71458892 2929891 2928870 NC_000014.9 velvet.61441 99.9 True fake: scaffold gap size wrong estimation (local) 71454021 71457286 2934358 2931050 NC_000014.9 velvet.61441 99.94 True fake: scaffold gap size wrong estimation (local) 71451724 71453709 2937411 2935450 NC_000014.9 velvet.61441 98.79 True fake: scaffold gap size wrong estimation (local) 71447841 71451447 2942056 2938442 NC_000014.9 velvet.61441 98.41 True fake: scaffold gap size wrong estimation (local) 71442857 71446115 2948004 2944746 NC_000014.9 velvet.61441 99.97 True relocation, scaffold gap is present, inconsistency = -20556314 91994503 91995609 2952672 2951566 NC_000014.9 velvet.61441 99.1 True local misassembly 91993477 91994251 2953447 2952673 NC_000014.9 velvet.61441 100.0 True fake: not a misassembly (possible transposable element) 56950389 56952118 2953458 2955187 NC_000014.9 velvet.61441 99.83 True fake: not a misassembly (possible transposable element) 91992082 91992650 2955828 2955260 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 8117209 100110408 100111173 2956377 2957142 NC_000014.9 velvet.61441 99.87 True fake: scaffold gap size wrong estimation (local) 100111459 100125149 2957933 2971612 NC_000014.9 velvet.61441 99.91 True fake: scaffold gap size wrong estimation (local) 100125857 100133701 2973166 2981075 NC_000014.9 velvet.61441 99.97 True fake: scaffold gap size wrong estimation (local) 100133927 100140015 2982128 2988216 NC_000014.9 velvet.61441 99.95 True relocation, scaffold gap is present, inconsistency = 28695958 71436108 71436755 2990077 2989430 NC_000014.9 velvet.61441 99.85 True fake: scaffold gap size wrong estimation (local) 71431651 71434596 2995269 2992305 NC_000014.9 velvet.61441 99.48 True fake: scaffold gap size wrong estimation (local) 71429407 71431446 2997608 2995569 NC_000014.9 velvet.61441 100.0 True fake: not a misassembly (possible transposable element) 71393633 71395440 3001984 3003790 NC_000014.9 velvet.61441 99.89 True fake: not a misassembly (possible transposable element) 71417481 71419472 3005792 3003801 NC_000014.9 velvet.61441 99.95 True fake: scaffold gap size wrong estimation (local) 71416144 71417227 3007766 3006620 NC_000014.9 velvet.61441 99.91 True fake: scaffold gap size wrong estimation (local) 71398196 71399749 3026614 3025061 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 71395481 71397977 3029921 3027429 NC_000014.9 velvet.61441 99.8 True fake: scaffold gap size wrong estimation (local) 71366691 71367293 3057983 3057381 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 71365241 71365788 3059321 3058774 NC_000014.9 velvet.61441 98.18 True fake: scaffold gap size wrong estimation (local) 71359243 71364730 3066184 3060706 NC_000014.9 velvet.61441 99.84 True relocation, scaffold gap is present, inconsistency = 55298 71420039 71421337 3066195 3067493 NC_000014.9 velvet.61441 99.85 True relocation, scaffold gap is present, inconsistency = 26415 71392760 71393533 3068357 3067584 NC_000014.9 velvet.61441 98.45 True local misassembly 71391367 71392549 3069540 3068358 NC_000014.9 velvet.61441 99.83 True fake: scaffold gap size wrong estimation (local) 71389051 71391099 3072628 3070581 NC_000014.9 velvet.61441 99.95 True fake: scaffold gap size wrong estimation (local) 71387256 71388961 3075107 3073376 NC_000014.9 velvet.61441 98.15 True relocation, scaffold gap is present, inconsistency = 28778683 100168813 100170454 3076276 3077952 NC_000014.9 velvet.61441 95.53 True fake: scaffold gap size wrong estimation (local) 100170721 100172199 3078274 3079752 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 100172661 100173793 3080333 3081995 NC_000014.9 velvet.61441 99.91 True fake: scaffold gap size wrong estimation (local) 100174514 100176315 3083349 3085150 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 100176487 100177491 3085583 3086587 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 100178076 100179984 3087878 3089786 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 100181927 100182619 3092452 3093144 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (extensive) 100209438 100210260 3110880 3111702 NC_000014.9 velvet.61441 99.88 True fake: scaffold gap size wrong estimation (local) 100211227 100213757 3113523 3116037 NC_000014.9 velvet.61441 99.29 True fake: scaffold gap size wrong estimation (local) 100214815 100216883 3117881 3119949 NC_000014.9 velvet.61441 99.9 True fake: scaffold gap size wrong estimation (local) 100217496 100218753 3121492 3122749 NC_000014.9 velvet.61441 99.92 True fake: scaffold gap size wrong estimation (local) 100219024 100219826 3122981 3123783 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 10590 100235890 100236528 3129257 3129895 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 100240807 100241718 3135952 3136863 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 100242896 100243798 3139194 3140096 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 100245907 100247387 3147376 3148856 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (extensive) 100258655 100259296 3152059 3152700 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -7401 100255575 100256089 3156380 3156894 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 100256894 100257711 3160415 3161232 NC_000014.9 velvet.61441 99.88 True local misassembly 100256173 100256877 3161243 3161947 NC_000014.9 velvet.61441 99.86 True fake: scaffold gap size wrong estimation (local) 100263065 100264004 3161958 3162895 NC_000014.9 velvet.61441 99.79 True local misassembly 100262194 100262964 3162906 3163668 NC_000014.9 velvet.61441 98.96 True relocation, scaffold gap is present, inconsistency = 67991246 32262697 32267234 3171919 3167382 NC_000014.9 velvet.61441 99.98 True fake: not a misassembly (possible transposable element) 34332685 34333333 3171997 3172645 NC_000014.9 velvet.61441 100.0 True fake: not a misassembly (possible transposable element) 32260714 32262585 3174527 3172656 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 2070914 34334201 34334743 3175229 3175771 NC_000014.9 velvet.61441 98.16 True indel: indel (> 5bp) 34334764 34335301 3175783 3176320 NC_000014.9 velvet.61441 99.63 True fake: scaffold gap size wrong estimation (local) 34337189 34338460 3178886 3180200 NC_000014.9 velvet.61441 99.76 True fake: scaffold gap size wrong estimation (local) 34339853 34341560 3182460 3184211 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 34341863 34342593 3185707 3186437 NC_000014.9 velvet.61441 99.86 True local misassembly 34342972 34344077 3186438 3187543 NC_000014.9 velvet.61441 98.46 True relocation, scaffold gap is present, inconsistency = 21551492 55896674 55905710 3188648 3197654 NC_000014.9 velvet.61441 99.65 True fake: scaffold gap size wrong estimation (local) 55905840 55916594 3198602 3209356 NC_000014.9 velvet.61441 99.96 True fake: not a misassembly (possible transposable element) 32229140 32234017 3215674 3210797 NC_000014.9 velvet.61441 100.0 True fake: not a misassembly (possible transposable element) 55920175 55931431 3215685 3226937 NC_000014.9 velvet.61441 99.95 True fake: scaffold gap size wrong estimation (local) 55931529 55934293 3227866 3230686 NC_000014.9 velvet.61441 99.82 True relocation, scaffold gap is present, inconsistency = 23719193 32199818 32203159 3243204 3239863 NC_000014.9 velvet.61441 99.91 True relocation, scaffold gap is present, inconsistency = 2160670 34367204 34368157 3246579 3247532 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 34370466 34371072 3250423 3251029 NC_000014.9 velvet.61441 99.84 True fake: scaffold gap size wrong estimation (local) 34375075 34379127 3252337 3256389 NC_000014.9 velvet.61441 99.9 True fake: scaffold gap size wrong estimation (local) 34379377 34381416 3257489 3259528 NC_000014.9 velvet.61441 99.75 True fake: scaffold gap size wrong estimation (local) 34382271 34383163 3261295 3262219 NC_000014.9 velvet.61441 96.32 True fake: scaffold gap size wrong estimation (local) 34383383 34385159 3262379 3264155 NC_000014.9 velvet.61441 99.94 True fake: scaffold gap size wrong estimation (local) 34386683 34389336 3266402 3269055 NC_000014.9 velvet.61441 99.89 True fake: scaffold gap size wrong estimation (local) 34389569 34390590 3270220 3271241 NC_000014.9 velvet.61441 99.9 True relocation, scaffold gap is present, inconsistency = 34008840 68399527 68405821 3277763 3271338 NC_000014.9 velvet.61441 99.97 True fake: scaffold gap size wrong estimation (local) 68391641 68399243 3286476 3278874 NC_000014.9 velvet.61441 99.87 True relocation, scaffold gap is present, inconsistency = 7774 68407029 68414767 3286488 3294192 NC_000014.9 velvet.61441 99.43 True fake: not a misassembly (possible transposable element) 69202111 69205963 3294203 3298947 NC_000014.9 velvet.61441 99.71 True fake: not a misassembly (possible transposable element) 68428195 68428714 3306296 3306815 NC_000014.9 velvet.61441 99.81 True fake: scaffold gap size wrong estimation (local) 68435961 68440493 3314723 3319433 NC_000014.9 velvet.61441 99.31 True relocation, scaffold gap is present, inconsistency = 16404 68415039 68419410 3323951 3319580 NC_000014.9 velvet.61441 99.95 True relocation, scaffold gap is present, inconsistency = -10903 68424961 68425931 3324932 3323962 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -9150198 77573902 77575148 3326189 3324943 NC_000014.9 velvet.61441 99.68 True relocation, scaffold gap is present, inconsistency = 21597152 55965618 55976039 3326900 3338164 NC_000014.9 velvet.61441 99.99 True relocation, scaffold gap is present, inconsistency = 12324177 68300379 68301582 3338327 3339530 NC_000014.9 velvet.61441 99.92 True fake: not a misassembly (possible transposable element) 68281016 68281991 3339541 3340516 NC_000014.9 velvet.61441 100.0 True fake: not a misassembly (possible transposable element) 68304200 68307018 3343652 3346469 NC_000014.9 velvet.61441 99.79 True fake: not a misassembly (possible transposable element) 68388369 68391620 3349767 3346480 NC_000014.9 velvet.61441 98.75 True fake: not a misassembly (possible transposable element) 68308732 68310593 3349778 3351639 NC_000014.9 velvet.61441 99.73 True relocation, scaffold gap is present, inconsistency = 71068 68381672 68388053 3358027 3351650 NC_000014.9 velvet.61441 99.87 True fake: scaffold gap size wrong estimation (local) 68373602 68381386 3366840 3359063 NC_000014.9 velvet.61441 99.85 True relocation, scaffold gap is present, inconsistency = 28750731 39621130 39622859 3366852 3368581 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 16381866 56004736 56006650 3368592 3370506 NC_000014.9 velvet.61441 99.95 True relocation, scaffold gap is present, inconsistency = 12305254 68311915 68315546 3370517 3374149 NC_000014.9 velvet.61441 99.83 True relocation, scaffold gap is present, inconsistency = -12317694 55999951 56004712 3376248 3381089 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 56009393 56010063 3382634 3383304 NC_000014.9 velvet.61441 100.0 True local misassembly 56007622 56008694 3383669 3384741 NC_000014.9 velvet.61441 99.91 True fake: scaffold gap size wrong estimation (local) 56031690 56040533 3408115 3418014 NC_000014.9 velvet.61441 99.98 True relocation, scaffold gap is present, inconsistency = 19068035 75111888 75112569 3421334 3422015 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 75112827 75115062 3422659 3424893 NC_000014.9 velvet.61441 99.73 True fake: scaffold gap size wrong estimation (local) 75115413 75116385 3425828 3426828 NC_000014.9 velvet.61441 96.81 True relocation, scaffold gap is present, inconsistency = 11364 75127760 75129432 3428538 3426839 NC_000014.9 velvet.61441 97.94 True relocation, scaffold gap is present, inconsistency = 16099 75145807 75146936 3428814 3429943 NC_000014.9 velvet.61441 99.91 True local misassembly 75143963 75144780 3429954 3430771 NC_000014.9 velvet.61441 99.88 True local misassembly 75144947 75145564 3430772 3431389 NC_000014.9 velvet.61441 98.22 True local misassembly 75138843 75139553 3431400 3432110 NC_000014.9 velvet.61441 99.86 True fake: scaffold gap size wrong estimation (local) 75140672 75142887 3434660 3436875 NC_000014.9 velvet.61441 99.86 True fake: scaffold gap size wrong estimation (local) 75147494 75149016 3436886 3438449 NC_000014.9 velvet.61441 99.47 True relocation, scaffold gap is present, inconsistency = 20312 75170166 75171266 3440387 3439287 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 75167212 75169380 3444235 3442067 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 75165499 75166934 3446835 3445400 NC_000014.9 velvet.61441 99.93 True fake: scaffold gap size wrong estimation (local) 75137981 75138794 3472903 3472090 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 75136272 75136999 3474592 3473865 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 75135431 75136172 3475758 3475017 NC_000014.9 velvet.61441 99.73 True fake: scaffold gap size wrong estimation (local) 75132390 75135187 3479431 3476634 NC_000014.9 velvet.61441 99.86 True fake: scaffold gap size wrong estimation (local) 75130748 75132105 3482032 3480675 NC_000014.9 velvet.61441 99.93 True fake: scaffold gap size wrong estimation (local) 75129606 75130169 3482922 3482358 NC_000014.9 velvet.61441 99.82 True fake: scaffold gap size wrong estimation (local) 75123429 75124858 3484360 3482933 NC_000014.9 velvet.61441 99.72 True relocation, scaffold gap is present, inconsistency = 50456 75175740 75177296 3484786 3486342 NC_000014.9 velvet.61441 99.29 True fake: scaffold gap size wrong estimation (local) 75184169 75184890 3489639 3490360 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -38582 75149216 75149851 3493268 3493908 NC_000014.9 velvet.61441 98.91 True fake: scaffold gap size wrong estimation (local) 75150094 75150937 3494397 3495240 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 75151521 75152776 3496437 3497692 NC_000014.9 velvet.61441 99.84 True fake: scaffold gap size wrong estimation (local) 75155266 75156691 3500924 3502349 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 37950 75203688 75205193 3511396 3512901 NC_000014.9 velvet.61441 99.93 True fake: scaffold gap size wrong estimation (local) 75205454 75205954 3513010 3513510 NC_000014.9 velvet.61441 99.8 True fake: scaffold gap size wrong estimation (local) 75206115 75206966 3514358 3515208 NC_000014.9 velvet.61441 99.88 True fake: scaffold gap size wrong estimation (local) 75207326 75207952 3515697 3516323 NC_000014.9 velvet.61441 99.84 True fake: scaffold gap size wrong estimation (local) 75208202 75209218 3517100 3518116 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 75209804 75210599 3519075 3519870 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 15263365 90473975 90475379 3521285 3519881 NC_000014.9 velvet.61441 99.93 True fake: scaffold gap size wrong estimation (local) 90465679 90467895 3525990 3523778 NC_000014.9 velvet.61441 99.64 True fake: scaffold gap size wrong estimation (local) 90462654 90465470 3529872 3527056 NC_000014.9 velvet.61441 99.86 True fake: scaffold gap size wrong estimation (local) 90457933 90460580 3535734 3533042 NC_000014.9 velvet.61441 99.96 True relocation, scaffold gap is present, inconsistency = 2235027 92695618 92696246 3535745 3536369 NC_000014.9 velvet.61441 99.36 True relocation, scaffold gap is present, inconsistency = -16964 92680560 92681931 3537647 3539019 NC_000014.9 velvet.61441 99.56 True fake: scaffold gap size wrong estimation (local) 92682189 92682912 3539813 3540536 NC_000014.9 velvet.61441 99.86 True relocation, scaffold gap is present, inconsistency = 22979 92705902 92707127 3540547 3541772 NC_000014.9 velvet.61441 100.0 True local misassembly 92703517 92705249 3541783 3543515 NC_000014.9 velvet.61441 99.94 True relocation, scaffold gap is present, inconsistency = -8136 92697124 92698916 3543526 3545318 NC_000014.9 velvet.61441 99.94 True fake: scaffold gap size wrong estimation (local) 92700113 92701377 3545964 3547228 NC_000014.9 velvet.61441 98.34 True fake: scaffold gap size wrong estimation (local) 92702306 92703251 3549038 3550016 NC_000014.9 velvet.61441 99.68 True relocation, scaffold gap is present, inconsistency = -17546317 75157955 75158484 3551037 3551566 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 75158864 75160792 3552180 3554108 NC_000014.9 velvet.61441 99.9 True fake: scaffold gap size wrong estimation (local) 75161027 75161834 3554970 3555777 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 17542833 92708886 92710955 3559996 3562065 NC_000014.9 velvet.61441 99.95 True relocation, scaffold gap is present, inconsistency = 2771458 95482424 95488573 3562076 3568233 NC_000014.9 velvet.61441 99.89 True relocation, scaffold gap is present, inconsistency = 5024589 90449966 90457824 3576671 3568244 NC_000014.9 velvet.61441 99.67 True fake: scaffold gap size wrong estimation (local) 90448868 90449703 3578533 3577698 NC_000014.9 velvet.61441 99.88 True fake: scaffold gap size wrong estimation (local) 90447451 90448698 3580103 3578856 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 90445950 90447211 3581950 3580689 NC_000014.9 velvet.61441 99.92 True fake: scaffold gap size wrong estimation (local) 90444801 90445499 3583837 3583139 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 90441507 90444702 3587175 3583980 NC_000014.9 velvet.61441 99.91 True fake: scaffold gap size wrong estimation (local) 90439197 90441250 3590155 3588102 NC_000014.9 velvet.61441 96.49 True fake: scaffold gap size wrong estimation (local) 90438304 90439196 3591527 3590635 NC_000014.9 velvet.61441 98.88 True fake: scaffold gap size wrong estimation (local) 90437319 90438023 3592346 3591642 NC_000014.9 velvet.61441 99.86 True fake: scaffold gap size wrong estimation (local) 90435451 90436163 3595062 3594350 NC_000014.9 velvet.61441 98.6 True local misassembly 90434195 90435200 3596068 3595063 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 2298590 92733801 92734473 3596079 3596751 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 10413 92744897 92745888 3596762 3597753 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 92746102 92746781 3597933 3598612 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 2313031 90431765 90432281 3599918 3599402 NC_000014.9 velvet.61441 100.0 True local misassembly 90433291 90433908 3600546 3599929 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 90429213 90430321 3604963 3603855 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 90426162 90427147 3609015 3608030 NC_000014.9 velvet.61441 99.9 True fake: not a misassembly (possible transposable element) 90405571 90409734 3613445 3609155 NC_000014.9 velvet.61441 99.95 True fake: not a misassembly (possible transposable element) 90413991 90414687 3614810 3614114 NC_000014.9 velvet.61441 99.86 True relocation, scaffold gap is present, inconsistency = -8413 90420772 90421930 3616442 3615284 NC_000014.9 velvet.61441 99.91 True fake: scaffold gap size wrong estimation (extensive) 90413029 90413727 3617151 3616453 NC_000014.9 velvet.61441 99.86 True fake: scaffold gap size wrong estimation (local) 90411128 90411753 3618094 3617469 NC_000014.9 velvet.61441 99.84 True fake: scaffold gap size wrong estimation (local) 90410335 90410874 3618933 3618394 NC_000014.9 velvet.61441 99.81 True fake: not a misassembly (possible transposable element) 90417824 90420209 3621329 3618944 NC_000014.9 velvet.61441 99.96 True fake: not a misassembly (possible transposable element) 90401917 90405555 3625039 3621401 NC_000014.9 velvet.61441 99.97 True fake: scaffold gap size wrong estimation (local) 90400960 90401653 3626912 3626219 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 90372699 90373218 3654358 3653839 NC_000014.9 velvet.61441 99.81 True fake: scaffold gap size wrong estimation (local) 90368429 90371736 3659357 3656051 NC_000014.9 velvet.61441 99.7 True relocation, scaffold gap is present, inconsistency = -16697 90378787 90385115 3665695 3659368 NC_000014.9 velvet.61441 99.87 True relocation, scaffold gap is present, inconsistency = -15778 90393375 90394554 3666885 3665706 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 90386942 90390911 3673868 3669899 NC_000014.9 velvet.61441 99.87 True fake: scaffold gap size wrong estimation (local) 90378004 90378580 3683098 3682522 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 90377265 90377926 3685149 3684488 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 90375764 90377028 3686506 3685242 NC_000014.9 velvet.61441 99.92 True fake: scaffold gap size wrong estimation (local) 90354514 90356625 3704189 3702114 NC_000014.9 velvet.61441 97.25 True fake: scaffold gap size wrong estimation (local) 90352446 90353260 3707535 3706721 NC_000014.9 velvet.61441 98.28 True local misassembly 90350874 90351591 3708253 3707536 NC_000014.9 velvet.61441 99.58 True fake: scaffold gap size wrong estimation (local) 90346752 90347476 3710445 3709721 NC_000014.9 velvet.61441 99.72 True local misassembly 90349559 90350287 3711184 3710456 NC_000014.9 velvet.61441 98.63 True local misassembly 90348722 90349284 3711747 3711185 NC_000014.9 velvet.61441 99.82 True fake: scaffold gap size wrong estimation (local) 90343842 90345615 3714247 3712474 NC_000014.9 velvet.61441 99.83 True relocation, scaffold gap is present, inconsistency = -26851 90367026 90368144 3717967 3716796 NC_000014.9 velvet.61441 99.82 True fake: scaffold gap size wrong estimation (local) 90364226 90364771 3721576 3721031 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 90361698 90363934 3724943 3722707 NC_000014.9 velvet.61441 99.96 True fake: scaffold gap size wrong estimation (local) 90335053 90335807 3751037 3750285 NC_000014.9 velvet.61441 99.21 True fake: scaffold gap size wrong estimation (local) 90333201 90334764 3752883 3751320 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 90330609 90333103 3756311 3753774 NC_000014.9 velvet.61441 96.32 True fake: scaffold gap size wrong estimation (extensive) 90318720 90320160 3759708 3758268 NC_000014.9 velvet.61441 99.93 True fake: scaffold gap size wrong estimation (local) 90315962 90318517 3763314 3760728 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 90313396 90314887 3766649 3765158 NC_000014.9 velvet.61441 99.93 True fake: scaffold gap size wrong estimation (local) 90310770 90313114 3770200 3767808 NC_000014.9 velvet.61441 98.11 True fake: scaffold gap size wrong estimation (local) 90309348 90310506 3772282 3771081 NC_000014.9 velvet.61441 99.47 True fake: scaffold gap size wrong estimation (local) 90307885 90308957 3774131 3773059 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 2485217 92795240 92796714 3775197 3776651 NC_000014.9 velvet.61441 98.5 True fake: scaffold gap size wrong estimation (local) 92797008 92798653 3777688 3779333 NC_000014.9 velvet.61441 99.94 True fake: scaffold gap size wrong estimation (local) 92799912 92803061 3781375 3784739 NC_000014.9 velvet.61441 99.97 True fake: scaffold gap size wrong estimation (local) 92803159 92804676 3785320 3786804 NC_000014.9 velvet.61441 97.75 True fake: scaffold gap size wrong estimation (local) 92804948 92806347 3787432 3788828 NC_000014.9 velvet.61441 99.71 True relocation, scaffold gap is present, inconsistency = 2504084 90299298 90300853 3790401 3788839 NC_000014.9 velvet.61441 99.55 True fake: scaffold gap size wrong estimation (local) 90297943 90299044 3791968 3790867 NC_000014.9 velvet.61441 99.91 True fake: scaffold gap size wrong estimation (local) 90293505 90296882 3797172 3793794 NC_000014.9 velvet.61441 99.94 True fake: scaffold gap size wrong estimation (local) 90289857 90293264 3801611 3798204 NC_000014.9 velvet.61441 99.94 True relocation, scaffold gap is present, inconsistency = 30066811 60218093 60221631 3806564 3803026 NC_000014.9 velvet.61441 99.97 True relocation, scaffold gap is present, inconsistency = -12925823 73142068 73143905 3808412 3806575 NC_000014.9 velvet.61441 99.95 True fake: scaffold gap size wrong estimation (local) 73140481 73141297 3810896 3810080 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 73139529 73140195 3811651 3810985 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 73135624 73137952 3816360 3813988 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 73134797 73135377 3818260 3817680 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 73133154 73133898 3819617 3818873 NC_000014.9 velvet.61441 99.87 True fake: scaffold gap size wrong estimation (local) 73130360 73131147 3823262 3822475 NC_000014.9 velvet.61441 99.37 True relocation, scaffold gap is present, inconsistency = 19705986 92837776 92838414 3823905 3824543 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 92839846 92840766 3826592 3827512 NC_000014.9 velvet.61441 99.78 True fake: scaffold gap size wrong estimation (local) 92841016 92841628 3828079 3828691 NC_000014.9 velvet.61441 97.23 True fake: scaffold gap size wrong estimation (local) 92841896 92842523 3828901 3829528 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 92842576 92843173 3830395 3830992 NC_000014.9 velvet.61441 100.0 True local misassembly 92843386 92844019 3830993 3831626 NC_000014.9 velvet.61441 98.11 True indel: indel (> 5bp) 92844041 92845071 3831627 3832657 NC_000014.9 velvet.61441 98.84 True fake: scaffold gap size wrong estimation (local) 92874288 92877354 3863034 3866098 NC_000014.9 velvet.61441 99.87 True fake: scaffold gap size wrong estimation (local) 92877601 92880169 3867332 3869811 NC_000014.9 velvet.61441 96.52 True fake: scaffold gap size wrong estimation (local) 92880415 92882422 3870804 3872862 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 92882663 92883928 3873692 3874957 NC_000014.9 velvet.61441 99.76 True fake: scaffold gap size wrong estimation (local) 92884189 92884856 3875457 3876124 NC_000014.9 velvet.61441 98.5 True fake: scaffold gap size wrong estimation (local) 92906591 92908018 3894123 3895550 NC_000014.9 velvet.61441 99.93 True fake: scaffold gap size wrong estimation (local) 92909411 92910240 3897858 3898687 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -17748617 75162290 75163045 3899354 3900109 NC_000014.9 velvet.61441 100.0 True fake: not a misassembly (possible transposable element) 92707208 92707899 3900147 3900838 NC_000014.9 velvet.61441 99.86 True fake: not a misassembly (possible transposable element) 75173999 75174792 3905338 3906131 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 75177954 75178761 3906142 3906949 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 17565074 92747515 92750115 3910629 3913229 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 2318566 90427368 90428938 3914810 3913240 NC_000014.9 velvet.61441 100.0 True fake: not a misassembly (possible transposable element) 103832142 103832798 3914821 3915477 NC_000014.9 velvet.61441 100.0 True fake: not a misassembly (possible transposable element) 90422962 90424566 3917092 3915488 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 90416037 90417399 3918465 3917103 NC_000014.9 velvet.61441 99.05 True relocation, scaffold gap is present, inconsistency = -10099 90424796 90425775 3919805 3918826 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 66124181 24294600 24298318 3925843 3922102 NC_000014.9 velvet.61441 98.83 True fake: scaffold gap size wrong estimation (local) 24289335 24293292 3931890 3927933 NC_000014.9 velvet.61441 99.85 True fake: scaffold gap size wrong estimation (local) 24287084 24288350 3935011 3933745 NC_000014.9 velvet.61441 99.92 True fake: scaffold gap size wrong estimation (local) 24285989 24286573 3936500 3935916 NC_000014.9 velvet.61441 99.66 True relocation, scaffold gap is present, inconsistency = 50907489 75196142 75197347 3938580 3939785 NC_000014.9 velvet.61441 99.17 True fake: scaffold gap size wrong estimation (local) 75197956 75199451 3941123 3942618 NC_000014.9 velvet.61441 99.33 True relocation, scaffold gap is present, inconsistency = 51796616 23398287 23400575 3945671 3943383 NC_000014.9 velvet.61441 99.91 True relocation, scaffold gap is present, inconsistency = 13001 23375229 23384466 3946491 3955799 NC_000014.9 velvet.61441 100.0 True fake: not a misassembly (possible transposable element) 24293784 24294311 3956843 3956316 NC_000014.9 velvet.61441 100.0 True fake: not a misassembly (possible transposable element) 23386636 23387858 3958581 3959803 NC_000014.9 velvet.61441 99.84 True fake: scaffold gap size wrong estimation (local) 23388308 23388897 3962034 3962623 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 75866533 99255441 99269526 3962634 3976594 NC_000014.9 velvet.61441 99.03 True fake: scaffold gap size wrong estimation (local) 99271548 99272415 3979200 3980067 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 99272581 99274672 3981127 3983218 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -3751326 95523357 95527990 3983229 3988782 NC_000014.9 velvet.61441 99.63 True relocation, scaffold gap is present, inconsistency = -16277 95511724 95512433 3988793 3989502 NC_000014.9 velvet.61441 99.86 True fake: scaffold gap size wrong estimation (local) 95512874 95516519 3989780 3994220 NC_000014.9 velvet.61441 95.97 True fake: scaffold gap size wrong estimation (local) 95516612 95519341 3995086 3997881 NC_000014.9 velvet.61441 96.16 True fake: scaffold gap size wrong estimation (local) 95519486 95520962 3998740 4000216 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 19875678 75643121 75643797 4000903 4000227 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -17006855 92646703 92649393 4004267 4001486 NC_000014.9 velvet.61441 99.89 True fake: scaffold gap size wrong estimation (local) 92645954 92646457 4005735 4005232 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 92643928 92645841 4007881 4005936 NC_000014.9 velvet.61441 99.68 True fake: scaffold gap size wrong estimation (local) 92642356 92643058 4010139 4009437 NC_000014.9 velvet.61441 98.44 True fake: scaffold gap size wrong estimation (local) 92635814 92636316 4011312 4010810 NC_000014.9 velvet.61441 99.8 True fake: scaffold gap size wrong estimation (local) 92634857 92635571 4012108 4011394 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 92631813 92633848 4016111 4014076 NC_000014.9 velvet.61441 99.85 True relocation, scaffold gap is present, inconsistency = 2894594 95528910 95529675 4016579 4017344 NC_000014.9 velvet.61441 99.61 True fake: scaffold gap size wrong estimation (local) 95529932 95534130 4018076 4022327 NC_000014.9 velvet.61441 99.93 True fake: scaffold gap size wrong estimation (local) 95534288 95539908 4023319 4029136 NC_000014.9 velvet.61441 99.82 True fake: scaffold gap size wrong estimation (local) 95540195 95549037 4030193 4039298 NC_000014.9 velvet.61441 99.08 True fake: scaffold gap size wrong estimation (local) 95549304 95550958 4040164 4041818 NC_000014.9 velvet.61441 99.82 True relocation, scaffold gap is present, inconsistency = -64628852 30922117 30924224 4041829 4043941 NC_000014.9 velvet.61441 99.71 True relocation, scaffold gap is present, inconsistency = 45298719 76222969 76231612 4052611 4043967 NC_000014.9 velvet.61441 99.88 True relocation, scaffold gap is present, inconsistency = 45295757 30924587 30927188 4052635 4055183 NC_000014.9 velvet.61441 97.92 True fake: scaffold gap size wrong estimation (local) 30927962 30929965 4056819 4058822 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 45291226 76221202 76222386 4060017 4058833 NC_000014.9 velvet.61441 99.92 True fake: scaffold gap size wrong estimation (local) 76215891 76221150 4065721 4060374 NC_000014.9 velvet.61441 99.89 True relocation, scaffold gap is present, inconsistency = 45194560 31018914 31019931 4068138 4067121 NC_000014.9 velvet.61441 98.92 True indel: indel (> 5bp) 31018136 31018844 4068847 4068139 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 31015640 31016555 4072256 4071341 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 31013073 31013782 4075667 4074958 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -35166415 66178914 66179477 4076241 4075678 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 41097828 25069093 25081075 4088234 4076252 NC_000014.9 velvet.61441 99.94 True relocation, scaffold gap is present, inconsistency = 41091762 66172848 66178911 4088245 4094307 NC_000014.9 velvet.61441 99.98 True relocation, scaffold gap is present, inconsistency = 27709468 93888390 93892598 4094318 4098527 NC_000014.9 velvet.61441 99.69 True fake: scaffold gap size wrong estimation (local) 93892724 93896447 4098941 4102557 NC_000014.9 velvet.61441 96.97 True relocation, scaffold gap is present, inconsistency = 17677583 76189322 76215130 4130052 4102568 NC_000014.9 velvet.61441 99.78 True relocation, scaffold gap is present, inconsistency = 19382316 95597457 95600580 4130063 4133234 NC_000014.9 velvet.61441 99.42 True inversion, scaffold gap is present 95591702 95593530 4135013 4133245 NC_000014.9 velvet.61441 96.52 True fake: scaffold gap size wrong estimation (local) 95590426 95590931 4136505 4136000 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 95587673 95590253 4140138 4137568 NC_000014.9 velvet.61441 99.53 True relocation, scaffold gap is present, inconsistency = 19397587 76182591 76187590 4147793 4142634 NC_000014.9 velvet.61441 99.96 True fake: scaffold gap size wrong estimation (local) 76180147 76182073 4151042 4149116 NC_000014.9 velvet.61441 99.79 True fake: scaffold gap size wrong estimation (local) 76177305 76179902 4154699 4151784 NC_000014.9 velvet.61441 99.61 True fake: scaffold gap size wrong estimation (local) 76165547 76171166 4162129 4156510 NC_000014.9 velvet.61441 99.88 True fake: scaffold gap size wrong estimation (local) 76162017 76165208 4166471 4163278 NC_000014.9 velvet.61441 99.75 True relocation, scaffold gap is present, inconsistency = -12975 76171715 76174619 4169795 4166844 NC_000014.9 velvet.61441 99.79 True local misassembly 76174908 76177076 4172931 4170785 NC_000014.9 velvet.61441 98.98 True relocation, scaffold gap is present, inconsistency = 10383 76160134 76161756 4177327 4175700 NC_000014.9 velvet.61441 99.51 True fake: scaffold gap size wrong estimation (local) 76152098 76159846 4186315 4178282 NC_000014.9 velvet.61441 99.79 True fake: scaffold gap size wrong estimation (local) 76150806 76152066 4190179 4188919 NC_000014.9 velvet.61441 99.84 True fake: scaffold gap size wrong estimation (local) 76149163 76150196 4192281 4191248 NC_000014.9 velvet.61441 99.81 True fake: scaffold gap size wrong estimation (local) 76146545 76148343 4195557 4193793 NC_000014.9 velvet.61441 97.99 True fake: scaffold gap size wrong estimation (local) 76141574 76142727 4196708 4195568 NC_000014.9 velvet.61441 98.44 True fake: not a misassembly (possible transposable element) 76143369 76146188 4196719 4199538 NC_000014.9 velvet.61441 99.93 True fake: not a misassembly (possible transposable element) 76140339 76141303 4200882 4199922 NC_000014.9 velvet.61441 99.48 True relocation, scaffold gap is present, inconsistency = -19417198 95556650 95557526 4201769 4200893 NC_000014.9 velvet.61441 99.89 True fake: scaffold gap size wrong estimation (local) 95555838 95556455 4202504 4201887 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 95550978 95555551 4208292 4203670 NC_000014.9 velvet.61441 99.71 True relocation, scaffold gap is present, inconsistency = 19413230 76129502 76137737 4216537 4208303 NC_000014.9 velvet.61441 99.92 True fake: scaffold gap size wrong estimation (local) 76123029 76127837 4223934 4219126 NC_000014.9 velvet.61441 99.77 True fake: scaffold gap size wrong estimation (local) 76119911 76122171 4227889 4225631 NC_000014.9 velvet.61441 99.73 True fake: scaffold gap size wrong estimation (local) 76109130 76119056 4240301 4229459 NC_000014.9 velvet.61441 99.74 True fake: scaffold gap size wrong estimation (local) 76104603 76108958 4245545 4241190 NC_000014.9 velvet.61441 99.98 True fake: scaffold gap size wrong estimation (local) 76097658 76104322 4253471 4246598 NC_000014.9 velvet.61441 99.86 True fake: scaffold gap size wrong estimation (local) 76092889 76097391 4258947 4254491 NC_000014.9 velvet.61441 98.93 True fake: scaffold gap size wrong estimation (local) 76067580 76070826 4283212 4279966 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 76036678 76039113 4310666 4308182 NC_000014.9 velvet.61441 99.92 True relocation, scaffold gap is present, inconsistency = -56028 76090505 76092695 4312862 4310677 NC_000014.9 velvet.61441 99.68 True fake: scaffold gap size wrong estimation (local) 76087949 76090336 4316184 4313755 NC_000014.9 velvet.61441 99.92 True fake: scaffold gap size wrong estimation (local) 76086177 76087815 4318699 4317061 NC_000014.9 velvet.61441 98.47 True fake: scaffold gap size wrong estimation (local) 76082413 76086176 4322614 4318851 NC_000014.9 velvet.61441 98.99 True fake: scaffold gap size wrong estimation (local) 76077210 76082412 4328620 4323418 NC_000014.9 velvet.61441 99.69 True fake: scaffold gap size wrong estimation (local) 76070919 76077209 4339513 4333223 NC_000014.9 velvet.61441 99.57 True relocation, scaffold gap is present, inconsistency = 4309736 80386974 80390014 4339542 4342582 NC_000014.9 velvet.61441 99.93 True relocation, scaffold gap is present, inconsistency = 4383589 76002368 76003374 4343599 4342593 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 11164 75988762 75991193 4346041 4343610 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 4389200 80380404 80384038 4346052 4349686 NC_000014.9 velvet.61441 99.97 True fake: scaffold gap size wrong estimation (local) 80384331 80386956 4350750 4353375 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 4325653 76056106 76057220 4355947 4354833 NC_000014.9 velvet.61441 99.91 True relocation, scaffold gap is present, inconsistency = 67548 75975369 75988545 4355960 4370057 NC_000014.9 velvet.61441 99.77 True relocation, scaffold gap is present, inconsistency = -24378 75964178 75970286 4370068 4376176 NC_000014.9 velvet.61441 99.93 True fake: not a misassembly (possible transposable element) 76057557 76058607 4377530 4376480 NC_000014.9 velvet.61441 100.0 True fake: not a misassembly (possible transposable element) 75970620 75973713 4377541 4380645 NC_000014.9 velvet.61441 99.45 True relocation, scaffold gap is present, inconsistency = 82663 76058629 76060252 4384521 4382898 NC_000014.9 velvet.61441 99.88 True fake: scaffold gap size wrong estimation (local) 76044311 76055175 4395379 4384532 NC_000014.9 velvet.61441 99.63 True fake: scaffold gap size wrong estimation (local) 76043520 76044148 4396600 4395972 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 47374 75991437 75994115 4398631 4402113 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (extensive) 76004068 76006873 4405059 4407864 NC_000014.9 velvet.61441 99.96 True relocation, scaffold gap is present, inconsistency = 4401255 80408419 80417822 4408155 4418381 NC_000014.9 velvet.61441 99.8 True fake: scaffold gap size wrong estimation (local) 80423226 80423992 4418392 4419158 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 4472386 75949862 75950829 4420163 4419169 NC_000014.9 velvet.61441 96.69 True relocation, scaffold gap is present, inconsistency = -6302022 82248690 82251873 4423357 4420174 NC_000014.9 velvet.61441 99.97 True indel: indel (<= 5bp) 82243915 82248688 4428131 4423358 NC_000014.9 velvet.61441 99.43 True fake: scaffold gap size wrong estimation (local) 82240509 82243914 4431628 4428223 NC_000014.9 velvet.61441 99.71 True local misassembly 82236315 82236993 4432307 4431629 NC_000014.9 velvet.61441 99.85 True fake: scaffold gap size wrong estimation (local) 82235176 82236210 4433599 4432463 NC_000014.9 velvet.61441 99.9 True fake: scaffold gap size wrong estimation (local) 82231553 82234859 4437782 4434476 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 1784522 80445238 80447020 4437793 4439575 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = -7112 80440066 80441392 4439733 4441058 NC_000014.9 velvet.61441 99.77 True fake: scaffold gap size wrong estimation (local) 80441566 80445100 4442110 4445649 NC_000014.9 velvet.61441 99.72 True relocation, scaffold gap is present, inconsistency = 4191195 84639418 84649907 4448772 4459253 NC_000014.9 velvet.61441 99.78 True relocation, scaffold gap is present, inconsistency = -4205397 80447039 80447885 4461782 4462637 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 80448162 80448873 4463104 4463815 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 80449157 80451727 4464528 4467106 NC_000014.9 velvet.61441 99.65 True fake: scaffold gap size wrong estimation (local) 80451834 80460425 4467985 4476809 NC_000014.9 velvet.61441 99.99 True fake: scaffold gap size wrong estimation (local) 80460689 80461799 4477474 4478584 NC_000014.9 velvet.61441 100.0 True fake: not a misassembly (possible transposable element) 84668384 84669484 4478595 4479695 NC_000014.9 velvet.61441 99.82 True fake: not a misassembly (possible transposable element) 80462135 80463994 4479828 4481687 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 80464793 80466204 4485779 4487190 NC_000014.9 velvet.61441 97.8 True fake: scaffold gap size wrong estimation (local) 80466205 80467553 4488435 4489783 NC_000014.9 velvet.61441 99.56 True fake: scaffold gap size wrong estimation (local) 80474740 80476702 4491509 4493471 NC_000014.9 velvet.61441 100.0 True fake: scaffold gap size wrong estimation (local) 80476961 80479372 4494586 4496997 NC_000014.9 velvet.61441 99.92 True relocation, scaffold gap is present, inconsistency = 4201079 84685007 84701123 4501553 4519364 NC_000014.9 velvet.61441 99.97 True relocation, scaffold gap is present, inconsistency = 91618 84792752 84793812 4520435 4519375 NC_000014.9 velvet.61441 99.91 True fake: scaffold gap size wrong estimation (local) 84767270 84770018 4546896 4544014 NC_000014.9 velvet.61441 99.82 True fake: scaffold gap size wrong estimation (local) 84765895 84767196 4548379 4547082 NC_000014.9 velvet.61441 99.69 True fake: scaffold gap size wrong estimation (local) 84763002 84765685 4552199 4549516 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 5955479 78802967 78807512 4552210 4557360 NC_000014.9 velvet.61441 99.91 True local misassembly 78801425 78802320 4557371 4558261 NC_000014.9 velvet.61441 99.11 True fake: scaffold gap size wrong estimation (local) 78807790 78810033 4558272 4560513 NC_000014.9 velvet.61441 99.78 True fake: scaffold gap size wrong estimation (local) 78810127 78813523 4561233 4564732 NC_000014.9 velvet.61441 99.76 True fake: not a misassembly (possible transposable element) 84725554 84727340 4584589 4582808 NC_000014.9 velvet.61441 99.66 True fake: not a misassembly (possible transposable element) 78843278 78852890 4592012 4601714 NC_000014.9 velvet.61441 99.99 True fake: scaffold gap size wrong estimation (local) 78853358 78854999 4602861 4604524 NC_000014.9 velvet.61441 98.44 True relocation, scaffold gap is present, inconsistency = 5846665 84701675 84702714 4605623 4604535 NC_000014.9 velvet.61441 99.71 True relocation, scaffold gap is present, inconsistency = 4194479 80506412 80507070 4606407 4605749 NC_000014.9 velvet.61441 100.0 True relocation, scaffold gap is present, inconsistency = 4202528 84730357 84731897 4627166 4628722 NC_000014.9 velvet.61441 98.91 True CONTIG velvet.61441 4628722 misassembled 102543872 102544658 168 954 NC_000014.9 velvet.61442 99.87 True local misassembly 102542936 102543798 965 1827 NC_000014.9 velvet.61442 99.77 True fake: scaffold gap size wrong estimation (local) 102545077 102546392 4092 5407 NC_000014.9 velvet.61442 99.92 True fake: scaffold gap size wrong estimation (extensive) 102584796 102587100 35573 37799 NC_000014.9 velvet.61442 96.47 True fake: scaffold gap size wrong estimation (local) 102588407 102589514 39909 40991 NC_000014.9 velvet.61442 97.72 True fake: scaffold gap size wrong estimation (local) 102589731 102592787 41816 44872 NC_000014.9 velvet.61442 99.8 True fake: scaffold gap size wrong estimation (local) 102593023 102595369 45940 48274 NC_000014.9 velvet.61442 99.44 True fake: scaffold gap size wrong estimation (local) 102598743 102599807 53288 54352 NC_000014.9 velvet.61442 100.0 True fake: scaffold gap size wrong estimation (local) 102601311 102601954 56572 57215 NC_000014.9 velvet.61442 99.84 True fake: scaffold gap size wrong estimation (local) 102602438 102604839 58169 60583 NC_000014.9 velvet.61442 95.51 True fake: scaffold gap size wrong estimation (local) 102605108 102606079 61543 62482 NC_000014.9 velvet.61442 96.36 True relocation, scaffold gap is present, inconsistency = 79665 102686698 102687952 64690 63436 NC_000014.9 velvet.61442 100.0 True fake: scaffold gap size wrong estimation (local) 102679750 102680523 66039 65266 NC_000014.9 velvet.61442 100.0 True relocation, scaffold gap is present, inconsistency = 19751163 82926194 82928576 66050 68432 NC_000014.9 velvet.61442 99.92 True fake: scaffold gap size wrong estimation (local) 82928882 82930599 69513 71230 NC_000014.9 velvet.61442 100.0 True fake: scaffold gap size wrong estimation (local) 82930815 82934813 71701 75759 NC_000014.9 velvet.61442 98.1 True relocation, scaffold gap is present, inconsistency = 19726330 102678554 102679464 94080 93170 NC_000014.9 velvet.61442 100.0 True relocation, scaffold gap is present, inconsistency = -8150 102685595 102686693 95272 94091 NC_000014.9 velvet.61442 99.54 True fake: scaffold gap size wrong estimation (local) 102682388 102685468 98723 95643 NC_000014.9 velvet.61442 99.68 True local misassembly 102680752 102682147 100119 98724 NC_000014.9 velvet.61442 100.0 True relocation, scaffold gap is present, inconsistency = 30728843 71941768 71948739 103289 110952 NC_000014.9 velvet.61442 99.91 True fake: scaffold gap size wrong estimation (local) 71948820 71949794 112905 113879 NC_000014.9 velvet.61442 99.9 True relocation, scaffold gap is present, inconsistency = 11008541 82958346 82965105 113890 120516 NC_000014.9 velvet.61442 97.97 True relocation, scaffold gap is present, inconsistency = 11000640 71955673 71956488 122577 121734 NC_000014.9 velvet.61442 96.45 True inversion, scaffold gap is present 71951562 71955514 122603 127297 NC_000014.9 velvet.61442 99.92 True fake: scaffold gap size wrong estimation (local) 71957999 71964041 130186 136228 NC_000014.9 velvet.61442 99.93 True fake: scaffold gap size wrong estimation (local) 71964516 71967208 137548 140240 NC_000014.9 velvet.61442 99.93 True fake: scaffold gap size wrong estimation (extensive) 71982315 71984322 147429 149436 NC_000014.9 velvet.61442 99.75 True fake: scaffold gap size wrong estimation (local) 71984515 71985178 150156 150819 NC_000014.9 velvet.61442 100.0 True fake: scaffold gap size wrong estimation (local) 71985389 71986467 151368 152446 NC_000014.9 velvet.61442 100.0 True relocation, scaffold gap is present, inconsistency = -20191 71967222 71968871 153392 155041 NC_000014.9 velvet.61442 100.0 True fake: scaffold gap size wrong estimation (local) 71969232 71973382 156466 160483 NC_000014.9 velvet.61442 96.71 True fake: scaffold gap size wrong estimation (local) 71973688 71975509 161273 163094 NC_000014.9 velvet.61442 100.0 True fake: scaffold gap size wrong estimation (local) 71987603 71992036 169188 173627 NC_000014.9 velvet.61442 99.93 True fake: scaffold gap size wrong estimation (local) 71992320 71998008 174660 180426 NC_000014.9 velvet.61442 99.86 True fake: scaffold gap size wrong estimation (local) 71998116 71999879 180577 183033 NC_000014.9 velvet.61442 99.82 True fake: scaffold gap size wrong estimation (local) 72000945 72001919 184833 185851 NC_000014.9 velvet.61442 99.68 True local misassembly 71999897 72000913 185862 186878 NC_000014.9 velvet.61442 99.9 True fake: scaffold gap size wrong estimation (local) 72002107 72002615 189316 189824 NC_000014.9 velvet.61442 99.8 True fake: scaffold gap size wrong estimation (local) 72003650 72004556 190767 191673 NC_000014.9 velvet.61442 99.89 True fake: scaffold gap size wrong estimation (local) 72004830 72011592 192712 199780 NC_000014.9 velvet.61442 99.79 True relocation, scaffold gap is present, inconsistency = -27021655 44989948 44990916 199791 200759 NC_000014.9 velvet.61442 100.0 True fake: not a misassembly (possible transposable element) 25256575 25258657 200760 202836 NC_000014.9 velvet.61442 99.37 True fake: not a misassembly (possible transposable element) 44991210 44992633 202847 204242 NC_000014.9 velvet.61442 98.02 True relocation, scaffold gap is present, inconsistency = -19733918 25258726 25260757 204253 206284 NC_000014.9 velvet.61442 100.0 True fake: scaffold gap size wrong estimation (local) 25262527 25263904 208749 210118 NC_000014.9 velvet.61442 99.42 True relocation, scaffold gap is present, inconsistency = 46656587 71924649 71925649 214276 215276 NC_000014.9 velvet.61442 100.0 True fake: scaffold gap size wrong estimation (local) 71931024 71936014 215287 220277 NC_000014.9 velvet.61442 99.98 True fake: not a misassembly (possible transposable element) 71936486 71937090 221523 220919 NC_000014.9 velvet.61442 99.17 True fake: not a misassembly (possible transposable element) 71939777 71940383 229613 230219 NC_000014.9 velvet.61442 99.84 True relocation, scaffold gap is present, inconsistency = -30611083 41343509 41346299 244428 247206 NC_000014.9 velvet.61442 99.25 True fake: scaffold gap size wrong estimation (local) 41346390 41347228 247742 248580 NC_000014.9 velvet.61442 99.64 True fake: scaffold gap size wrong estimation (local) 41347818 41358323 249644 260388 NC_000014.9 velvet.61442 99.84 True relocation, scaffold gap is present, inconsistency = -119341 41238993 41240173 260399 261579 NC_000014.9 velvet.61442 99.32 True fake: scaffold gap size wrong estimation (local) 41240267 41242777 261726 264298 NC_000014.9 velvet.61442 99.88 True fake: scaffold gap size wrong estimation (local) 41243202 41249368 265544 271831 NC_000014.9 velvet.61442 99.85 True fake: scaffold gap size wrong estimation (local) 41249648 41256470 272783 280338 NC_000014.9 velvet.61442 99.93 True fake: scaffold gap size wrong estimation (local) 41256560 41257189 280752 281380 NC_000014.9 velvet.61442 99.84 True fake: scaffold gap size wrong estimation (local) 41257355 41262236 282067 286948 NC_000014.9 velvet.61442 100.0 True fake: scaffold gap size wrong estimation (local) 41262635 41265113 288092 290570 NC_000014.9 velvet.61442 99.96 True relocation, scaffold gap is present, inconsistency = 23183 41237767 41238959 292255 291063 NC_000014.9 velvet.61442 99.66 True fake: scaffold gap size wrong estimation (local) 41233955 41234857 297116 296214 NC_000014.9 velvet.61442 99.0 True relocation, inconsistency = -109514 41342750 41343468 297803 297117 NC_000014.9 velvet.61442 95.01 True fake: scaffold gap size wrong estimation (local) 41339893 41342041 301351 299212 NC_000014.9 velvet.61442 99.21 True relocation, scaffold gap is present, inconsistency = 68427 41266157 41271455 301362 306660 NC_000014.9 velvet.61442 99.91 True fake: scaffold gap size wrong estimation (local) 41271664 41276173 307598 312264 NC_000014.9 velvet.61442 99.87 True fake: scaffold gap size wrong estimation (local) 41276782 41278233 313887 315291 NC_000014.9 velvet.61442 96.44 True relocation, scaffold gap is present, inconsistency = 40540 41235132 41235984 316401 315549 NC_000014.9 velvet.61442 99.53 True fake: scaffold gap size wrong estimation (local) 41231593 41233762 320849 318672 NC_000014.9 velvet.61442 96.21 True fake: scaffold gap size wrong estimation (local) 41228764 41231239 324550 322075 NC_000014.9 velvet.61442 99.88 True fake: scaffold gap size wrong estimation (local) 41224722 41228479 329515 325377 NC_000014.9 velvet.61442 99.89 True relocation, scaffold gap is present, inconsistency = 60435 41301071 41306062 341672 346662 NC_000014.9 velvet.61442 99.9 True fake: scaffold gap size wrong estimation (local) 41306424 41311052 347823 352429 NC_000014.9 velvet.61442 98.33 True relocation, scaffold gap is present, inconsistency = -31908 41279405 41286517 352690 361201 NC_000014.9 velvet.61442 99.93 True fake: scaffold gap size wrong estimation (local) 41286611 41290252 361336 365740 NC_000014.9 velvet.61442 99.92 True relocation, scaffold gap is present, inconsistency = 12059105 53365055 53367488 383842 381438 NC_000014.9 velvet.61442 98.64 True relocation, scaffold gap is present, inconsistency = 12060224 41291301 41301050 387623 398151 NC_000014.9 velvet.61442 99.6 True fake: scaffold gap size wrong estimation (local) 41331074 41332340 426159 427425 NC_000014.9 velvet.61442 99.53 True local misassembly 41330496 41331054 427436 427994 NC_000014.9 velvet.61442 99.82 True fake: scaffold gap size wrong estimation (local) 41332962 41335064 430817 432866 NC_000014.9 velvet.61442 97.1 True relocation, scaffold gap is present, inconsistency = -22336 41313013 41315121 433151 435259 NC_000014.9 velvet.61442 100.0 True fake: scaffold gap size wrong estimation (local) 41315207 41324417 435957 447133 NC_000014.9 velvet.61442 99.84 True fake: scaffold gap size wrong estimation (local) 41358616 41361530 475792 478706 NC_000014.9 velvet.61442 100.0 True fake: scaffold gap size wrong estimation (local) 41361778 41371283 479773 489245 NC_000014.9 velvet.61442 99.54 True fake: scaffold gap size wrong estimation (local) 41372702 41381870 491350 501288 NC_000014.9 velvet.61442 99.96 True fake: scaffold gap size wrong estimation (local) 41382270 41386481 501993 506781 NC_000014.9 velvet.61442 99.81 True fake: scaffold gap size wrong estimation (local) 41386689 41395857 507802 518380 NC_000014.9 velvet.61442 99.98 True fake: scaffold gap size wrong estimation (local) 41396663 41400710 519942 524005 NC_000014.9 velvet.61442 99.61 True fake: scaffold gap size wrong estimation (local) 41401390 41402169 525405 526184 NC_000014.9 velvet.61442 100.0 True fake: scaffold gap size wrong estimation (local) 41402406 41402998 526474 527066 NC_000014.9 velvet.61442 100.0 True fake: scaffold gap size wrong estimation (local) 41403454 41405420 528164 530130 NC_000014.9 velvet.61442 99.59 True fake: scaffold gap size wrong estimation (local) 41405756 41411367 530575 536186 NC_000014.9 velvet.61442 99.64 True fake: scaffold gap size wrong estimation (local) 41412034 41414359 536637 538962 NC_000014.9 velvet.61442 99.57 True fake: scaffold gap size wrong estimation (local) 41414360 41415682 540635 541957 NC_000014.9 velvet.61442 97.51 True indel: indel (<= 5bp) 41415686 41416696 541958 542968 NC_000014.9 velvet.61442 98.71 True fake: scaffold gap size wrong estimation (local) 41417669 41420451 544566 547560 NC_000014.9 velvet.61442 99.89 True fake: scaffold gap size wrong estimation (local) 41420832 41421514 548456 549138 NC_000014.9 velvet.61442 99.85 True fake: scaffold gap size wrong estimation (local) 41421773 41422691 549519 550437 NC_000014.9 velvet.61442 100.0 True fake: scaffold gap size wrong estimation (local) 41422936 41431674 551400 561047 NC_000014.9 velvet.61442 99.06 True fake: scaffold gap size wrong estimation (local) 41431848 41442723 562045 574665 NC_000014.9 velvet.61442 99.89 True fake: scaffold gap size wrong estimation (local) 41442987 41450524 575633 584050 NC_000014.9 velvet.61442 99.88 True fake: scaffold gap size wrong estimation (local) 41450788 41466248 585281 600935 NC_000014.9 velvet.61442 99.95 True fake: scaffold gap size wrong estimation (local) 41466503 41469431 601974 604902 NC_000014.9 velvet.61442 100.0 True fake: scaffold gap size wrong estimation (local) 41469727 41475071 606024 611539 NC_000014.9 velvet.61442 99.48 True fake: scaffold gap size wrong estimation (local) 41475357 41482410 611986 620335 NC_000014.9 velvet.61442 99.96 True fake: scaffold gap size wrong estimation (local) 41482726 41483499 620857 621630 NC_000014.9 velvet.61442 100.0 True fake: scaffold gap size wrong estimation (local) 41486621 41492245 621713 627604 NC_000014.9 velvet.61442 99.86 True fake: scaffold gap size wrong estimation (local) 41497084 41498073 632282 633271 NC_000014.9 velvet.61442 99.9 True fake: scaffold gap size wrong estimation (extensive) 41521884 41526080 666003 671327 NC_000014.9 velvet.61442 99.64 True relocation, scaffold gap is present, inconsistency = -33837 41492931 41493496 672015 672579 NC_000014.9 velvet.61442 99.82 True fake: scaffold gap size wrong estimation (local) 41498338 41508233 678747 690225 NC_000014.9 velvet.61442 99.93 True fake: scaffold gap size wrong estimation (local) 41508529 41509495 691391 692357 NC_000014.9 velvet.61442 99.9 True fake: scaffold gap size wrong estimation (local) 41509754 41510847 692660 693753 NC_000014.9 velvet.61442 100.0 True fake: scaffold gap size wrong estimation (local) 41513263 41515762 697486 699985 NC_000014.9 velvet.61442 99.96 True fake: scaffold gap size wrong estimation (local) 41541456 41553685 725009 739115 NC_000014.9 velvet.61442 99.48 True fake: scaffold gap size wrong estimation (local) 41553769 41554678 739714 740623 NC_000014.9 velvet.61442 99.89 True CONTIG velvet.61442 740639 misassembled 67129059 67129773 1 715 NC_000014.9 velvet.61444 100.0 True CONTIG velvet.61444 715 correct CONTIG velvet.61449 453 unaligned CONTIG velvet.61453 256 unaligned