S1 E1 S2 E2 Reference Contig IDY Ambiguous Best_group 106027371 106074667 49545 2305 NC_000014.9 scf320043576099 99.33 True fake: scaffold gap size wrong estimation (extensive) 106014989 106017890 52661 49760 NC_000014.9 scf320043576099 100.0 True fake: scaffold gap size wrong estimation (local) 106012134 106014249 55451 53336 NC_000014.9 scf320043576099 99.95 True fake: scaffold gap size wrong estimation (local) 105989271 106012039 77663 55566 NC_000014.9 scf320043576099 96.84 True fake: scaffold gap size wrong estimation (local) 105959553 105989042 107343 77813 NC_000014.9 scf320043576099 99.92 True CONTIG scf320043576099 107343 correct 38633302 38634687 1403 18 NC_000014.9 scf320043576103 99.93 True fake: scaffold gap size wrong estimation (local) 38631600 38632710 3387 2277 NC_000014.9 scf320043576103 100.0 True CONTIG scf320043576103 3387 correct 27363225 27409097 1 45936 NC_000014.9 scf320043576104 99.59 True fake: scaffold gap size wrong estimation (local) 27409219 27459712 46025 96439 NC_000014.9 scf320043576104 99.25 True CONTIG scf320043576104 97929 correct 49761127 49820980 2067 61787 NC_000014.9 scf320043576105 99.07 True fake: scaffold gap size wrong estimation (local) 49821666 49886229 61939 126566 NC_000014.9 scf320043576105 99.44 True fake: scaffold gap size wrong estimation (local) 49886571 50072842 126765 313432 NC_000014.9 scf320043576105 99.75 True CONTIG scf320043576105 313432 correct 36122281 36143061 20824 1 NC_000014.9 scf320043576106 99.6 True CONTIG scf320043576106 20824 correct CONTIG scf320043576109 1088 unaligned 102241670 102415542 1 173612 NC_000014.9 scf320043576113 99.4 True fake: scaffold gap size wrong estimation (local) 102416118 102483936 174187 240891 NC_000014.9 scf320043576113 98.12 True indel: indel (<= 5bp) 102484003 102509403 240957 266441 NC_000014.9 scf320043576113 99.75 True fake: scaffold gap size wrong estimation (local) 102509830 102530794 266860 287774 NC_000014.9 scf320043576113 99.55 True CONTIG scf320043576113 287774 correct 103765072 103767664 1 2592 NC_000014.9 scf320043576114 99.69 True CONTIG scf320043576114 2592 correct 18678071 18697989 19167 1 NC_000014.9 scf320043576116 96.19 True CONTIG scf320043576116 19167 correct 34535616 34542404 6887 1 NC_000014.9 scf320043576117 98.93 True fake: scaffold gap size wrong estimation (local) 34527169 34534155 14940 7954 NC_000014.9 scf320043576117 99.84 True CONTIG scf320043576117 14941 correct 43345186 43371491 1 26340 NC_000014.9 scf320043576118 99.87 True CONTIG scf320043576118 26341 correct 42017434 42049007 31551 1 NC_000014.9 scf320043576119 99.9 True fake: scaffold gap size wrong estimation (local) 41909405 42017362 139650 31693 NC_000014.9 scf320043576119 99.92 True CONTIG scf320043576119 139650 correct 73552779 73555915 1 3137 NC_000014.9 scf320043576120 99.94 True CONTIG scf320043576120 3137 correct 59874765 59876171 1 1407 NC_000014.9 scf320043576121 100.0 True CONTIG scf320043576121 1407 correct 39287285 39354788 1 67760 NC_000014.9 scf320043576122 99.61 True fake: scaffold gap size wrong estimation (local) 39355106 39357686 67895 70474 NC_000014.9 scf320043576122 99.85 True CONTIG scf320043576122 70478 correct CONTIG scf320043576124 1418 unaligned 84254773 84290927 1 36163 NC_000014.9 scf320043576125 99.89 True fake: scaffold gap size wrong estimation (local) 84291297 84317474 36507 62683 NC_000014.9 scf320043576125 99.95 True fake: scaffold gap size wrong estimation (local) 84318307 84501565 63374 246461 NC_000014.9 scf320043576125 99.7 True CONTIG scf320043576125 246461 correct 70520013 70548421 1 28435 NC_000014.9 scf320043576126 99.79 True CONTIG scf320043576126 28435 correct 86250886 86306137 1 55206 NC_000014.9 scf320043576127 99.35 True fake: scaffold gap size wrong estimation (local) 86306327 86314779 55349 63827 NC_000014.9 scf320043576127 99.55 True CONTIG scf320043576127 63827 correct 79274102 79308861 34828 39 NC_000014.9 scf320043576128 99.88 True fake: scaffold gap size wrong estimation (local) 79257416 79273458 51363 35405 NC_000014.9 scf320043576128 98.87 True fake: scaffold gap size wrong estimation (local) 79130845 79257540 179004 52370 NC_000014.9 scf320043576128 99.72 True CONTIG scf320043576128 179004 correct 43376141 43492617 1 116425 NC_000014.9 scf320043576129 99.72 True CONTIG scf320043576129 116425 correct 43067888 43254998 1 187034 NC_000014.9 scf320043576130 99.81 True fake: scaffold gap size wrong estimation (local) 43254504 43256829 187245 189570 NC_000014.9 scf320043576130 100.0 True fake: scaffold gap size wrong estimation (local) 43256926 43264000 189746 196820 NC_000014.9 scf320043576130 99.79 True CONTIG scf320043576130 196820 correct 62541770 62558856 1 17082 NC_000014.9 scf320043576131 99.84 True CONTIG scf320043576131 17082 correct 63122267 63140637 17 18424 NC_000014.9 scf320043576132 99.74 True CONTIG scf320043576132 18424 correct 34155242 34193373 38127 1 NC_000014.9 scf320043576133 99.73 True CONTIG scf320043576133 38147 correct 80034669 80038731 16 4107 NC_000014.9 scf320043576134 99.22 True CONTIG scf320043576134 4107 correct 66171261 66184236 12976 1 NC_000014.9 scf320043576135 100.0 True CONTIG scf320043576135 12976 correct 18341138 18347988 1 6851 NC_000014.9 scf320043576136 99.88 True CONTIG scf320043576136 6851 correct 90852084 90853686 1606 4 NC_000014.9 scf320043576137 99.88 True indel: indel (<= 5bp) 90850467 90852083 3224 1608 NC_000014.9 scf320043576137 99.94 True indel: indel (<= 5bp) 90845121 90850463 8567 3225 NC_000014.9 scf320043576137 99.94 True local misassembly 90842627 90843580 9521 8568 NC_000014.9 scf320043576137 99.58 True CONTIG scf320043576137 9531 correct 25886525 25938201 51751 1 NC_000014.9 scf320043576138 99.89 True fake: scaffold gap size wrong estimation (local) 25867079 25885852 70761 52329 NC_000014.9 scf320043576138 97.81 True fake: scaffold gap size wrong estimation (local) 25855170 25866263 82652 71584 NC_000014.9 scf320043576138 99.71 True CONTIG scf320043576138 82664 correct 42938871 42946430 7560 1 NC_000014.9 scf320043576139 99.93 True fake: scaffold gap size wrong estimation (local) 42839537 42938625 106844 7788 NC_000014.9 scf320043576139 99.88 True fake: scaffold gap size wrong estimation (local) 42505622 42839438 441008 107022 NC_000014.9 scf320043576139 99.7 True CONTIG scf320043576139 441008 correct 20933262 20941330 1 8069 NC_000014.9 scf320043576140 99.95 True fake: scaffold gap size wrong estimation (local) 20941607 20944946 8175 11515 NC_000014.9 scf320043576140 99.97 True CONTIG scf320043576140 11515 correct 65895942 65897303 1 1362 NC_000014.9 scf320043576141 99.93 True fake: scaffold gap size wrong estimation (local) 65898039 66028143 2063 132485 NC_000014.9 scf320043576141 99.75 True CONTIG scf320043576141 133864 correct 21632273 21702961 70814 1 NC_000014.9 scf320043576142 99.59 True CONTIG scf320043576142 70814 correct 73172251 73184019 1 11769 NC_000014.9 scf320043576143 99.97 True fake: scaffold gap size wrong estimation (local) 73184860 73223889 12402 51669 NC_000014.9 scf320043576143 99.31 True fake: scaffold gap size wrong estimation (local) 73224647 73312731 52356 141436 NC_000014.9 scf320043576143 99.33 True fake: scaffold gap size wrong estimation (local) 73313064 73347959 141680 176625 NC_000014.9 scf320043576143 99.74 True CONTIG scf320043576143 176625 correct 31398633 31408945 1 10279 NC_000014.9 scf320043576144 99.45 True fake: scaffold gap size wrong estimation (local) 31409055 31467504 10391 68762 NC_000014.9 scf320043576144 99.2 True CONTIG scf320043576144 68762 correct 87417482 87423873 1 6392 NC_000014.9 scf320043576145 100.0 True CONTIG scf320043576145 6392 correct 63751594 63801856 50648 225 NC_000014.9 scf320043576146 99.33 True CONTIG scf320043576146 50907 correct 73772676 73779761 7087 1 NC_000014.9 scf320043576147 99.83 True CONTIG scf320043576147 7087 correct 79936641 80030394 93846 1 NC_000014.9 scf320043576148 99.8 True CONTIG scf320043576148 93862 correct 60938344 61010357 1 72159 NC_000014.9 scf320043576149 99.75 True CONTIG scf320043576149 72159 correct 37302032 37351224 49206 18 NC_000014.9 scf320043576150 99.59 True CONTIG scf320043576150 49206 correct 62197931 62200077 2147 1 NC_000014.9 scf320043576151 99.95 True fake: scaffold gap size wrong estimation (local) 62178962 62197693 21054 2322 NC_000014.9 scf320043576151 99.87 True CONTIG scf320043576151 21054 correct 104414033 104498838 1 85868 NC_000014.9 scf320043576152 96.88 True CONTIG scf320043576152 85870 correct 36772262 36779282 1 7051 NC_000014.9 scf320043576153 99.76 True fake: scaffold gap size wrong estimation (local) 36779560 36789729 7298 17463 NC_000014.9 scf320043576153 99.85 True fake: scaffold gap size wrong estimation (local) 36789912 36895417 17636 123238 NC_000014.9 scf320043576153 99.74 True CONTIG scf320043576153 123238 correct 62154437 62181916 1 27453 NC_000014.9 scf320043576154 99.71 True CONTIG scf320043576154 27453 correct 44644978 44705178 60346 14 NC_000014.9 scf320043576155 99.58 True CONTIG scf320043576155 60346 correct 79773069 79934686 161563 1 NC_000014.9 scf320043576156 99.6 True CONTIG scf320043576156 161563 correct 46181954 46218481 36579 1 NC_000014.9 scf320043576157 99.78 True CONTIG scf320043576157 36579 correct 40381323 40421682 40591 1 NC_000014.9 scf320043576158 99.5 True CONTIG scf320043576158 40591 correct 24449181 24485189 35983 1 NC_000014.9 scf320043576159 99.03 True CONTIG scf320043576159 35983 correct 55672576 55680482 1 7979 NC_000014.9 scf320043576160 98.71 True CONTIG scf320043576160 7979 correct 40730808 40949661 218869 1 NC_000014.9 scf320043576161 99.76 True fake: scaffold gap size wrong estimation (local) 40633074 40728715 316347 220731 NC_000014.9 scf320043576161 99.84 True CONTIG scf320043576161 316347 correct 25954347 25962356 7919 37 NC_000014.9 scf320043576162 98.27 True CONTIG scf320043576162 7919 correct 25963392 26109163 1324 147156 NC_000014.9 scf320043576163 99.81 True CONTIG scf320043576163 147160 correct 49599936 49656198 56120 1 NC_000014.9 scf320043576164 99.25 True fake: scaffold gap size wrong estimation (local) 49535510 49599776 120608 56242 NC_000014.9 scf320043576164 99.68 True CONTIG scf320043576164 120608 correct 46017699 46095767 1 78003 NC_000014.9 scf320043576165 99.56 True CONTIG scf320043576165 78005 correct 61060806 61075878 15064 1 NC_000014.9 scf320043576166 99.79 True CONTIG scf320043576166 15064 correct 25596346 25677913 81574 1 NC_000014.9 scf320043576167 99.73 True CONTIG scf320043576167 81574 correct 59665346 59749627 1 84190 NC_000014.9 scf320043576168 99.8 True fake: scaffold gap size wrong estimation (local) 59750715 59836406 85315 171014 NC_000014.9 scf320043576168 99.94 True CONTIG scf320043576168 171014 correct 25777135 25779179 2177 133 NC_000014.9 scf320043576169 99.85 True relocation, scaffold gap is present, inconsistency = -80622004 106389665 106399118 11653 2198 NC_000014.9 scf320043576169 99.78 True CONTIG scf320043576169 11682 misassembled 31602413 31612897 1 10524 NC_000014.9 scf320043576170 99.73 True fake: scaffold gap size wrong estimation (local) 31613604 31635624 11145 33165 NC_000014.9 scf320043576170 99.88 True CONTIG scf320043576170 33165 correct 103684760 103766059 1 81391 NC_000014.9 scf320043576171 99.8 True CONTIG scf320043576171 81391 correct 25287318 25333770 46543 1 NC_000014.9 scf320043576172 99.16 True CONTIG scf320043576172 46543 correct 73628754 73705454 3 76801 NC_000014.9 scf320043576173 99.82 True CONTIG scf320043576173 76801 correct 70231166 70248893 1 17726 NC_000014.9 scf320043576174 99.71 True CONTIG scf320043576174 17726 correct 25187453 25204872 17415 1 NC_000014.9 scf320043576175 99.77 True CONTIG scf320043576175 17415 correct 88924633 88992834 68231 1 NC_000014.9 scf320043576176 99.84 True fake: scaffold gap size wrong estimation (local) 88792778 88924227 199276 68622 NC_000014.9 scf320043576176 99.3 True fake: scaffold gap size wrong estimation (local) 88758340 88792468 233467 199561 NC_000014.9 scf320043576176 99.29 True CONTIG scf320043576176 233467 correct 77747741 77756131 4 8397 NC_000014.9 scf320043576177 99.82 True fake: scaffold gap size wrong estimation (local) 77756728 77781611 8964 34092 NC_000014.9 scf320043576177 98.9 True CONTIG scf320043576177 34092 correct 24697651 24717896 20234 1 NC_000014.9 scf320043576178 99.87 True fake: scaffold gap size wrong estimation (local) 24642843 24696281 74907 21535 NC_000014.9 scf320043576178 99.81 True fake: scaffold gap size wrong estimation (local) 24604655 24642624 113046 75028 NC_000014.9 scf320043576178 99.82 True CONTIG scf320043576178 113046 correct 83204148 83273373 1 69216 NC_000014.9 scf320043576179 99.79 True CONTIG scf320043576179 69216 correct 52506806 52529285 1 22470 NC_000014.9 scf320043576180 99.92 True fake: scaffold gap size wrong estimation (local) 52530628 52552973 24060 46400 NC_000014.9 scf320043576180 99.96 True fake: scaffold gap size wrong estimation (local) 52553243 52732096 46628 225368 NC_000014.9 scf320043576180 99.55 True CONTIG scf320043576180 225368 correct 42943576 42955004 11427 1 NC_000014.9 scf320043576181 99.93 True CONTIG scf320043576181 11427 correct 40332081 40349160 1 17078 NC_000014.9 scf320043576182 99.92 True CONTIG scf320043576182 17078 correct 37512167 37555252 3 43083 NC_000014.9 scf320043576183 99.88 True fake: scaffold gap size wrong estimation (local) 37555722 37767377 43459 255435 NC_000014.9 scf320043576183 99.72 True CONTIG scf320043576183 255435 correct 22240955 22351226 110914 1 NC_000014.9 scf320043576184 99.36 True CONTIG scf320043576184 110914 correct 37189918 37296856 1 106737 NC_000014.9 scf320043576185 99.64 True CONTIG scf320043576185 106737 correct 21702871 21756227 8 53418 NC_000014.9 scf320043576186 99.66 True CONTIG scf320043576186 53430 correct 32519788 32580836 9 61070 NC_000014.9 scf320043576187 99.92 True CONTIG scf320043576187 61070 correct 104376182 104413166 37022 1 NC_000014.9 scf320043576188 99.84 True fake: scaffold gap size wrong estimation (local) 104355036 104375402 58051 37659 NC_000014.9 scf320043576188 99.94 True fake: scaffold gap size wrong estimation (local) 104325340 104354810 87526 58268 NC_000014.9 scf320043576188 99.16 True fake: scaffold gap size wrong estimation (local) 104300994 104324419 111637 88300 NC_000014.9 scf320043576188 99.32 True fake: scaffold gap size wrong estimation (local) 104251655 104300912 160748 111770 NC_000014.9 scf320043576188 99.34 True fake: scaffold gap size wrong estimation (local) 104242766 104251073 169837 161527 NC_000014.9 scf320043576188 99.83 True fake: scaffold gap size wrong estimation (local) 104217329 104242039 195450 170549 NC_000014.9 scf320043576188 95.49 True fake: scaffold gap size wrong estimation (local) 104139197 104217097 273581 196214 NC_000014.9 scf320043576188 96.39 True fake: scaffold gap size wrong estimation (local) 104136428 104139082 276390 273707 NC_000014.9 scf320043576188 99.62 True fake: scaffold gap size wrong estimation (local) 104123499 104136314 289578 276524 NC_000014.9 scf320043576188 98.14 True fake: scaffold gap size wrong estimation (local) 104085530 104122716 327015 290046 NC_000014.9 scf320043576188 99.09 True fake: scaffold gap size wrong estimation (local) 103889083 104085445 524172 327241 NC_000014.9 scf320043576188 98.96 True CONTIG scf320043576188 524172 correct 29816390 29826665 1 10092 NC_000014.9 scf320043576189 98.1 True indel: indel (<= 5bp) 29826664 29892012 10093 75404 NC_000014.9 scf320043576189 99.86 True fake: scaffold gap size wrong estimation (local) 29892439 29927416 75706 110705 NC_000014.9 scf320043576189 99.91 True fake: scaffold gap size wrong estimation (local) 29927979 29956600 111200 139841 NC_000014.9 scf320043576189 99.94 True CONTIG scf320043576189 139873 correct 76735378 76746506 11165 1 NC_000014.9 scf320043576190 99.49 True fake: scaffold gap size wrong estimation (local) 76732988 76734399 13474 12065 NC_000014.9 scf320043576190 99.29 True fake: scaffold gap size wrong estimation (local) 76705657 76732378 40763 14037 NC_000014.9 scf320043576190 99.32 True fake: scaffold gap size wrong estimation (local) 76414175 76705239 332563 41131 NC_000014.9 scf320043576190 99.64 True fake: scaffold gap size wrong estimation (local) 76333156 76413986 413464 332705 NC_000014.9 scf320043576190 99.77 True fake: scaffold gap size wrong estimation (local) 76122407 76332404 624223 414252 NC_000014.9 scf320043576190 99.76 True CONTIG scf320043576190 624223 correct 25935162 25947984 1 12821 NC_000014.9 scf320043576191 99.89 True fake: scaffold gap size wrong estimation (local) 25948553 25957581 13169 22197 NC_000014.9 scf320043576191 99.99 True CONTIG scf320043576191 22197 correct 68431654 68465700 1 34016 NC_000014.9 scf320043576192 99.81 True fake: scaffold gap size wrong estimation (local) 68465837 68648152 34110 216331 NC_000014.9 scf320043576192 99.84 True fake: scaffold gap size wrong estimation (local) 68648647 68876820 216685 447044 NC_000014.9 scf320043576192 99.33 True fake: scaffold gap size wrong estimation (local) 68877589 69045162 447810 615426 NC_000014.9 scf320043576192 99.78 True CONTIG scf320043576192 615426 correct 104498915 104529052 29861 1 NC_000014.9 scf320043576193 98.71 True CONTIG scf320043576193 29982 correct 39525969 39583900 1 57927 NC_000014.9 scf320043576194 99.87 True CONTIG scf320043576194 57928 correct 31467530 31604196 1 137015 NC_000014.9 scf320043576195 99.68 True CONTIG scf320043576195 137016 correct 20439158 20453515 14353 1 NC_000014.9 scf320043576196 99.81 True fake: scaffold gap size wrong estimation (local) 20285336 20438554 167616 14909 NC_000014.9 scf320043576196 99.35 True CONTIG scf320043576196 167627 correct 22641426 22647458 6000 1 NC_000014.9 scf320043576197 99.1 True indel: indel (> 5bp) 22640484 22641210 6916 6190 NC_000014.9 scf320043576197 99.59 True fake: scaffold gap size wrong estimation (local) 22627382 22636230 16410 7562 NC_000014.9 scf320043576197 99.63 True indel: indel (> 5bp) 22625653 22627374 18132 16411 NC_000014.9 scf320043576197 99.83 True local misassembly 22620246 22625347 23234 18133 NC_000014.9 scf320043576197 99.9 True CONTIG scf320043576197 23239 correct 34637713 34663754 2 25718 NC_000014.9 scf320043576198 98.26 True fake: scaffold gap size wrong estimation (local) 34664534 34874244 27096 237342 NC_000014.9 scf320043576198 99.23 True fake: scaffold gap size wrong estimation (local) 34875096 34903852 238189 267066 NC_000014.9 scf320043576198 99.53 True local misassembly 34905779 34953259 267272 314430 NC_000014.9 scf320043576198 99.22 True fake: scaffold gap size wrong estimation (local) 34953367 34984652 314615 345467 NC_000014.9 scf320043576198 98.11 True fake: scaffold gap size wrong estimation (local) 34984861 35038899 345645 399665 NC_000014.9 scf320043576198 99.65 True fake: scaffold gap size wrong estimation (local) 35039660 35105603 399964 466451 NC_000014.9 scf320043576198 99.77 True fake: scaffold gap size wrong estimation (local) 35105959 35175325 466746 536241 NC_000014.9 scf320043576198 99.78 True CONTIG scf320043576198 536241 correct 25209779 25290407 80492 113 NC_000014.9 scf320043576199 99.42 True CONTIG scf320043576199 80492 correct 57107100 57113040 5961 14 NC_000014.9 scf320043576200 99.43 True indel: indel (> 5bp) 57106044 57107033 7002 6011 NC_000014.9 scf320043576200 99.5 True CONTIG scf320043576200 7002 correct 61075875 61093183 17414 1 NC_000014.9 scf320043576201 99.26 True relocation, inconsistency = 10777540 50231729 50298334 84014 17415 NC_000014.9 scf320043576201 99.8 True fake: scaffold gap size wrong estimation (local) 50110192 50231327 205748 84415 NC_000014.9 scf320043576201 99.68 True fake: scaffold gap size wrong estimation (local) 50077898 50109998 238040 205902 NC_000014.9 scf320043576201 99.83 True CONTIG scf320043576201 238040 misassembled 39481714 39521820 1 39985 NC_000014.9 scf320043576202 99.56 True CONTIG scf320043576202 40016 correct 37356042 37356541 1 500 NC_000014.9 scf320043576203 98.2 True indel: indel (> 5bp) 37356636 37361599 587 5554 NC_000014.9 scf320043576203 99.48 True CONTIG scf320043576203 5589 correct 68294398 68428714 1 134533 NC_000014.9 scf320043576204 99.63 True CONTIG scf320043576204 134533 correct 37016264 37192994 176781 1 NC_000014.9 scf320043576205 99.78 True CONTIG scf320043576205 176781 correct 39661100 39675169 1 14070 NC_000014.9 scf320043576206 99.96 True fake: scaffold gap size wrong estimation (local) 39675909 39698234 14649 36978 NC_000014.9 scf320043576206 99.88 True CONTIG scf320043576206 36978 correct 70505990 70520112 1 14118 NC_000014.9 scf320043576207 99.83 True CONTIG scf320043576207 14118 correct 31638301 31664553 26247 1 NC_000014.9 scf320043576208 99.82 True CONTIG scf320043576208 26247 correct 39942911 39950521 7662 50 NC_000014.9 scf320043576209 99.95 True fake: scaffold gap size wrong estimation (local) 39700764 39942608 249861 7955 NC_000014.9 scf320043576209 99.5 True CONTIG scf320043576209 249861 correct 92858408 92869618 10 11218 NC_000014.9 scf320043576210 99.87 True CONTIG scf320043576210 11218 correct 22969702 23050503 1 80689 NC_000014.9 scf320043576211 99.57 True fake: scaffold gap size wrong estimation (local) 23051088 23194574 81296 224951 NC_000014.9 scf320043576211 99.72 True CONTIG scf320043576211 224951 correct 41213938 41282204 10 68307 NC_000014.9 scf320043576212 99.84 True CONTIG scf320043576212 68307 correct 46300316 46351557 51243 1 NC_000014.9 scf320043576213 99.78 True fake: scaffold gap size wrong estimation (local) 46266490 46299959 84924 51327 NC_000014.9 scf320043576213 99.55 True CONTIG scf320043576213 84930 correct 91436238 91448437 1 12196 NC_000014.9 scf320043576214 99.84 True CONTIG scf320043576214 12196 correct 53270953 53299409 21 28529 NC_000014.9 scf320043576215 99.77 True CONTIG scf320043576215 28529 correct 93168698 93233424 6 64857 NC_000014.9 scf320043576216 99.8 True fake: scaffold gap size wrong estimation (local) 93234188 93332627 65663 164143 NC_000014.9 scf320043576216 99.89 True fake: scaffold gap size wrong estimation (local) 93332856 93413561 164407 245350 NC_000014.9 scf320043576216 99.64 True CONTIG scf320043576216 245350 correct 65858986 65895672 1 36700 NC_000014.9 scf320043576217 99.8 True CONTIG scf320043576217 36700 correct 25330219 25367715 37493 1 NC_000014.9 scf320043576218 99.85 True CONTIG scf320043576218 37493 correct 86319201 86375617 1 56480 NC_000014.9 scf320043576219 99.68 True fake: scaffold gap size wrong estimation (local) 86376099 86443288 56842 124881 NC_000014.9 scf320043576219 98.92 True fake: scaffold gap size wrong estimation (local) 86444430 86472053 126038 153469 NC_000014.9 scf320043576219 98.75 True CONTIG scf320043576219 153504 correct 77852928 77992337 139511 1 NC_000014.9 scf320043576220 99.79 True fake: scaffold gap size wrong estimation (local) 77781764 77852615 210323 139725 NC_000014.9 scf320043576220 99.14 True CONTIG scf320043576220 210323 correct 72397802 72405338 1 7931 NC_000014.9 scf320043576221 98.46 True CONTIG scf320043576221 7931 correct 20093195 20104731 43 11595 NC_000014.9 scf320043576222 99.74 True CONTIG scf320043576222 11595 correct 31757186 31794050 36897 1 NC_000014.9 scf320043576223 99.77 True CONTIG scf320043576223 36897 correct 37359539 37513751 154595 1 NC_000014.9 scf320043576224 99.75 True CONTIG scf320043576224 154595 correct 36407801 36413865 6065 1 NC_000014.9 scf320043576225 99.62 True CONTIG scf320043576225 6065 correct 25685238 25771516 1 86289 NC_000014.9 scf320043576226 99.8 True CONTIG scf320043576226 86289 correct 94608440 94657594 1 48929 NC_000014.9 scf320043576227 98.62 True CONTIG scf320043576227 48929 correct 38000403 38100269 1 99856 NC_000014.9 scf320043576228 99.96 True fake: scaffold gap size wrong estimation (local) 38100969 38191282 100612 190840 NC_000014.9 scf320043576228 99.68 True CONTIG scf320043576228 190840 correct 61011509 61055270 1 43749 NC_000014.9 scf320043576229 99.79 True CONTIG scf320043576229 43749 correct 52201041 52209670 1 8623 NC_000014.9 scf320043576230 99.18 True CONTIG scf320043576230 8636 correct 62970045 63116800 2 146663 NC_000014.9 scf320043576231 99.87 True CONTIG scf320043576231 146663 correct 25367375 25599571 232428 1 NC_000014.9 scf320043576232 99.77 True CONTIG scf320043576232 232428 correct 40238262 40269220 30957 1 NC_000014.9 scf320043576233 99.94 True CONTIG scf320043576233 30957 correct 86474066 86593687 1 119903 NC_000014.9 scf320043576234 99.67 True CONTIG scf320043576234 119903 correct 68088010 68294489 205884 1 NC_000014.9 scf320043576235 99.44 True fake: scaffold gap size wrong estimation (local) 67892434 68087837 401279 206004 NC_000014.9 scf320043576235 99.91 True CONTIG scf320043576235 401279 correct 70285055 70306045 20981 1 NC_000014.9 scf320043576236 99.63 True fake: scaffold gap size wrong estimation (local) 70255083 70284602 50896 21393 NC_000014.9 scf320043576236 99.61 True CONTIG scf320043576236 50896 correct 25812485 25854647 42229 44 NC_000014.9 scf320043576237 99.98 True fake: scaffold gap size wrong estimation (local) 25783546 25811900 71025 42672 NC_000014.9 scf320043576237 99.9 True CONTIG scf320043576237 71025 correct 42384526 42405271 1 20775 NC_000014.9 scf320043576238 99.86 True CONTIG scf320043576238 20775 correct 27462215 27464196 1982 1 NC_000014.9 scf320043576239 99.95 True CONTIG scf320043576239 4141 correct 27464102 27657565 193609 1 NC_000014.9 scf320043576240 99.58 True CONTIG scf320043576240 193609 correct 67882835 67895884 13044 1 NC_000014.9 scf320043576241 99.89 True fake: scaffold gap size wrong estimation (local) 67873748 67882128 22117 13740 NC_000014.9 scf320043576241 99.87 True CONTIG scf320043576241 22164 correct 36095862 36120379 24556 1 NC_000014.9 scf320043576242 99.58 True fake: scaffold gap size wrong estimation (local) 36056292 36095690 64102 24656 NC_000014.9 scf320043576242 99.75 True CONTIG scf320043576242 64102 correct 39648062 39658862 10796 1 NC_000014.9 scf320043576243 99.91 True CONTIG scf320043576243 10796 correct 81122036 81220212 1 98092 NC_000014.9 scf320043576244 99.62 True fake: scaffold gap size wrong estimation (local) 81220957 81244524 98706 122301 NC_000014.9 scf320043576244 99.52 True fake: scaffold gap size wrong estimation (local) 81244920 81368515 122773 248743 NC_000014.9 scf320043576244 98.78 True CONTIG scf320043576244 248743 correct 59924041 59946912 1 22908 NC_000014.9 scf320043576245 99.83 True CONTIG scf320043576245 22920 correct 97167916 97392825 225735 1 NC_000014.9 scf320043576246 99.67 True local misassembly 96767391 97167383 625713 225736 NC_000014.9 scf320043576246 99.61 True CONTIG scf320043576246 625713 correct 62203456 62213920 10466 1 NC_000014.9 scf320043576247 99.98 True CONTIG scf320043576247 10466 correct 41675205 41752896 77746 1 NC_000014.9 scf320043576248 99.91 True fake: scaffold gap size wrong estimation (local) 41583132 41673316 170093 79843 NC_000014.9 scf320043576248 99.75 True relocation, inconsistency = 732026 42405343 42416089 170094 180734 NC_000014.9 scf320043576248 98.91 True CONTIG scf320043576248 180734 misassembled 42427608 42508639 81051 1 NC_000014.9 scf320043576249 99.82 True CONTIG scf320043576249 81051 correct 43603055 43620697 1 17643 NC_000014.9 scf320043576250 99.95 True fake: scaffold gap size wrong estimation (local) 43620829 43701916 17761 98825 NC_000014.9 scf320043576250 99.84 True CONTIG scf320043576250 98831 correct 80868860 80985111 116253 1 NC_000014.9 scf320043576251 99.68 True CONTIG scf320043576251 116253 correct 66187168 66204133 16967 1 NC_000014.9 scf320043576252 99.95 True CONTIG scf320043576252 16967 correct 73028683 73175282 146548 1 NC_000014.9 scf320043576253 99.74 True fake: scaffold gap size wrong estimation (local) 72988930 73026809 185987 148307 NC_000014.9 scf320043576253 99.35 True CONTIG scf320043576253 185992 correct 51881702 51894003 12304 1 NC_000014.9 scf320043576254 99.9 True fake: scaffold gap size wrong estimation (local) 51799792 51880988 94180 12889 NC_000014.9 scf320043576254 99.69 True CONTIG scf320043576254 94180 correct 101658754 101747132 1 88171 NC_000014.9 scf320043576255 98.8 True CONTIG scf320043576255 88176 correct 77621941 77721998 1 100219 NC_000014.9 scf320043576256 99.58 True fake: scaffold gap size wrong estimation (local) 77722839 77747678 100963 125860 NC_000014.9 scf320043576256 99.74 True CONTIG scf320043576256 125860 correct 80985107 81038713 53512 1 NC_000014.9 scf320043576257 99.14 True CONTIG scf320043576257 53514 correct 25680530 25682618 2095 1 NC_000014.9 scf320043576258 99.47 True CONTIG scf320043576258 2095 correct 32511488 32522359 1 10873 NC_000014.9 scf320043576259 99.79 True CONTIG scf320043576259 10873 correct 46351567 46510022 9 158575 NC_000014.9 scf320043576260 99.47 True CONTIG scf320043576260 158578 correct 72403470 72410943 7474 1 NC_000014.9 scf320043576261 99.93 True CONTIG scf320043576261 7474 correct 42972090 42997772 25658 1 NC_000014.9 scf320043576262 99.68 True CONTIG scf320043576262 25658 correct 76100141 76101882 1 1742 NC_000014.9 scf320043576263 100.0 True CONTIG scf320043576263 1742 correct 49077559 49084273 1 6715 NC_000014.9 scf320043576264 99.99 True fake: scaffold gap size wrong estimation (local) 49084573 49098044 6875 20346 NC_000014.9 scf320043576264 99.9 True CONTIG scf320043576264 20346 correct 43703738 43946143 1 242222 NC_000014.9 scf320043576265 99.75 True fake: scaffold gap size wrong estimation (local) 43946816 43989168 242793 285177 NC_000014.9 scf320043576265 99.62 True fake: scaffold gap size wrong estimation (local) 43989204 44025878 285265 321876 NC_000014.9 scf320043576265 99.7 True CONTIG scf320043576265 321904 correct 79754529 79768178 1 13650 NC_000014.9 scf320043576266 99.85 True CONTIG scf320043576266 13665 correct 60342798 60423203 80407 1 NC_000014.9 scf320043576267 99.99 True CONTIG scf320043576267 80545 correct 62642236 62751125 108912 1 NC_000014.9 scf320043576268 99.85 True CONTIG scf320043576268 108912 correct 86079297 86096292 17061 20 NC_000014.9 scf320043576269 99.85 True CONTIG scf320043576269 17061 correct 84596457 84914150 317729 1 NC_000014.9 scf320043576270 99.67 True fake: scaffold gap size wrong estimation (local) 84503904 84596313 409989 317906 NC_000014.9 scf320043576270 98.55 True CONTIG scf320043576270 409989 correct 34296936 34348268 1 51193 NC_000014.9 scf320043576271 99.13 True fake: scaffold gap size wrong estimation (local) 34350627 34375153 53244 77752 NC_000014.9 scf320043576271 99.69 True CONTIG scf320043576271 77752 correct 22925103 22969770 44856 12 NC_000014.9 scf320043576272 99.63 True fake: scaffold gap size wrong estimation (local) 22915500 22924515 54463 45452 NC_000014.9 scf320043576272 99.9 True CONTIG scf320043576272 54463 correct 36895064 37015701 1 120586 NC_000014.9 scf320043576273 99.86 True CONTIG scf320043576273 120586 correct 22689014 22738671 49689 1 NC_000014.9 scf320043576274 99.88 True relocation, inconsistency = 47569517 70308189 70457626 49690 198836 NC_000014.9 scf320043576274 99.15 True CONTIG scf320043576274 198836 misassembled 43497833 43534007 1 36390 NC_000014.9 scf320043576275 99.5 True fake: scaffold gap size wrong estimation (local) 43534505 43599635 36782 102022 NC_000014.9 scf320043576275 99.69 True CONTIG scf320043576275 102029 correct 41754743 41906668 1 152131 NC_000014.9 scf320043576276 99.7 True CONTIG scf320043576276 152131 correct 23742564 23759420 16852 1 NC_000014.9 scf320043576277 99.77 True CONTIG scf320043576277 16864 correct 88124801 88375382 14 250822 NC_000014.9 scf320043576278 99.83 True CONTIG scf320043576278 250822 correct 36147750 36186858 1 39092 NC_000014.9 scf320043576279 99.63 True CONTIG scf320043576279 39092 correct 36190555 36284469 1 94282 NC_000014.9 scf320043576280 99.47 True CONTIG scf320043576280 94282 correct 101813934 101828695 14790 1 NC_000014.9 scf320043576281 99.61 True CONTIG scf320043576281 14795 correct 71808442 71843226 34830 1 NC_000014.9 scf320043576282 99.81 True CONTIG scf320043576282 34830 correct 37782311 37951298 1 169392 NC_000014.9 scf320043576283 99.71 True CONTIG scf320043576283 169422 correct 34582141 34639346 57004 1 NC_000014.9 scf320043576284 97.88 True fake: scaffold gap size wrong estimation (local) 34565284 34581440 73730 57564 NC_000014.9 scf320043576284 99.71 True CONTIG scf320043576284 73730 correct 85019874 85057995 38213 1 NC_000014.9 scf320043576285 99.68 True CONTIG scf320043576285 38331 correct 80488222 80622417 155 134540 NC_000014.9 scf320043576286 99.77 True fake: scaffold gap size wrong estimation (local) 80622401 80801456 134744 313735 NC_000014.9 scf320043576286 99.74 True fake: scaffold gap size wrong estimation (local) 80801519 80858343 313814 370660 NC_000014.9 scf320043576286 99.84 True fake: scaffold gap size wrong estimation (local) 80858450 80871842 370908 384300 NC_000014.9 scf320043576286 99.9 True CONTIG scf320043576286 384300 correct 27337142 27358887 1 21750 NC_000014.9 scf320043576287 99.76 True CONTIG scf320043576287 21768 correct 55992977 56014164 21 21209 NC_000014.9 scf320043576288 99.99 True CONTIG scf320043576288 21209 correct 45463392 45476857 1 13437 NC_000014.9 scf320043576289 99.74 True CONTIG scf320043576289 13437 correct 43267043 43344046 6 77028 NC_000014.9 scf320043576290 99.98 True CONTIG scf320043576290 77599 correct 95157275 95162310 5035 1 NC_000014.9 scf320043576291 99.96 True fake: scaffold gap size wrong estimation (local) 94938846 95157155 223374 5151 NC_000014.9 scf320043576291 99.81 True fake: scaffold gap size wrong estimation (local) 94890604 94937669 271482 224477 NC_000014.9 scf320043576291 99.07 True fake: scaffold gap size wrong estimation (local) 94658599 94890159 503703 272030 NC_000014.9 scf320043576291 99.76 True CONTIG scf320043576291 503760 correct 30369294 30407629 38333 1 NC_000014.9 scf320043576292 99.97 True CONTIG scf320043576292 38333 correct 30690140 31049271 1 358856 NC_000014.9 scf320043576293 99.65 True CONTIG scf320043576293 358856 correct 27654282 27673478 1 19199 NC_000014.9 scf320043576294 99.92 True CONTIG scf320043576294 19201 correct 41279098 41335431 1 56282 NC_000014.9 scf320043576295 99.79 True CONTIG scf320043576295 56282 correct 44226931 44312968 1 86055 NC_000014.9 scf320043576296 99.89 True CONTIG scf320043576296 86055 correct 56644464 56668234 23753 1 NC_000014.9 scf320043576297 99.74 True CONTIG scf320043576297 23753 correct 71235592 71368253 132754 1 NC_000014.9 scf320043576298 99.84 True fake: scaffold gap size wrong estimation (local) 71040527 71235368 327859 132956 NC_000014.9 scf320043576298 99.75 True CONTIG scf320043576298 327859 correct 89487004 89505847 1 18845 NC_000014.9 scf320043576299 99.95 True fake: scaffold gap size wrong estimation (local) 89506282 89528409 19444 41410 NC_000014.9 scf320043576299 98.73 True fake: scaffold gap size wrong estimation (local) 89528544 89556873 41517 69854 NC_000014.9 scf320043576299 99.75 True CONTIG scf320043576299 69854 correct 70482281 70504935 1 22650 NC_000014.9 scf320043576300 99.91 True fake: scaffold gap size wrong estimation (local) 70505470 70506732 23254 24513 NC_000014.9 scf320043576300 99.6 True CONTIG scf320043576300 24513 correct 42257195 42282699 1 25502 NC_000014.9 scf320043576301 99.9 True fake: scaffold gap size wrong estimation (local) 42282844 42292064 25598 34812 NC_000014.9 scf320043576301 99.89 True fake: scaffold gap size wrong estimation (local) 42292380 42330193 35052 72865 NC_000014.9 scf320043576301 99.94 True fake: scaffold gap size wrong estimation (local) 42330332 42387765 72983 130411 NC_000014.9 scf320043576301 99.89 True CONTIG scf320043576301 130411 correct 52389500 52397091 1 7592 NC_000014.9 scf320043576302 99.99 True CONTIG scf320043576302 7592 correct 62346639 62536284 189655 1 NC_000014.9 scf320043576303 99.81 True CONTIG scf320043576303 189655 correct 28987254 29002683 15430 1 NC_000014.9 scf320043576304 99.97 True CONTIG scf320043576304 15430 correct 44384437 44471863 87419 1 NC_000014.9 scf320043576305 99.85 True fake: scaffold gap size wrong estimation (local) 44324170 44384159 147741 87748 NC_000014.9 scf320043576305 99.93 True CONTIG scf320043576305 147741 correct 49102023 49144938 43239 1 NC_000014.9 scf320043576306 99.24 True CONTIG scf320043576306 43239 correct 18879024 18884786 5747 1 NC_000014.9 scf320043576307 99.51 True CONTIG scf320043576307 5747 correct 18295061 18299927 1 4866 NC_000014.9 scf320043576308 99.61 True CONTIG scf320043576308 4866 correct 28193972 28254033 60062 1 NC_000014.9 scf320043576309 99.89 True CONTIG scf320043576309 60062 correct 106369657 106372519 1 2863 NC_000014.9 scf320043576310 99.97 True fake: scaffold gap size wrong estimation (local) 106372936 106391434 3401 21910 NC_000014.9 scf320043576310 99.86 True CONTIG scf320043576310 21910 correct 18570034 18583883 13858 1 NC_000014.9 scf320043576311 99.88 True CONTIG scf320043576311 13858 correct 47108070 47175106 67100 2 NC_000014.9 scf320043576312 99.79 True CONTIG scf320043576312 67111 correct 54204438 54234338 29846 4 NC_000014.9 scf320043576313 99.63 True CONTIG scf320043576313 29846 correct 88993636 89221950 1 228185 NC_000014.9 scf320043576314 99.77 True CONTIG scf320043576314 228185 correct 65819185 65856661 37490 1 NC_000014.9 scf320043576315 99.85 True fake: scaffold gap size wrong estimation (local) 65708136 65818846 149427 38019 NC_000014.9 scf320043576315 98.33 True CONTIG scf320043576315 149427 correct 18235940 18241093 16 5170 NC_000014.9 scf320043576316 99.81 True CONTIG scf320043576316 5170 correct 62328476 62349380 12 20918 NC_000014.9 scf320043576317 99.35 True CONTIG scf320043576317 20918 correct 22674254 22679801 1 5548 NC_000014.9 scf320043576318 99.81 True inversion 22649052 22676205 32713 5549 NC_000014.9 scf320043576318 99.65 True inversion, scaffold gap is present 22683138 22688468 32749 38079 NC_000014.9 scf320043576318 99.94 True CONTIG scf320043576318 38103 misassembled 57535437 57667893 132176 29 NC_000014.9 scf320043576319 99.44 True fake: scaffold gap size wrong estimation (local) 57343161 57535135 324716 132381 NC_000014.9 scf320043576319 99.68 True CONTIG scf320043576319 324716 correct 103207423 103278790 125 71513 NC_000014.9 scf320043576320 99.44 True CONTIG scf320043576320 71963 correct 80094097 80247485 153531 16 NC_000014.9 scf320043576321 99.8 True CONTIG scf320043576321 153531 correct 79054097 79126423 72341 1 NC_000014.9 scf320043576322 99.77 True CONTIG scf320043576322 72343 correct 58579829 58589886 10079 1 NC_000014.9 scf320043576323 99.61 True CONTIG scf320043576323 10079 correct 106565765 106595210 1 29451 NC_000014.9 scf320043576324 99.78 True CONTIG scf320043576324 29451 correct 24489974 24493418 8 3452 NC_000014.9 scf320043576325 99.54 True CONTIG scf320043576325 3452 correct 66150182 66174439 24286 1 NC_000014.9 scf320043576326 99.9 True fake: scaffold gap size wrong estimation (local) 66096984 66149749 77409 24644 NC_000014.9 scf320043576326 99.99 True CONTIG scf320043576326 77409 correct 20086349 20087462 1 1114 NC_000014.9 scf320043576327 99.28 True fake: scaffold gap size wrong estimation (local) 20087816 20094536 1398 8124 NC_000014.9 scf320043576327 99.63 True CONTIG scf320043576327 8130 correct 53323087 53385980 62873 1 NC_000014.9 scf320043576328 99.67 True CONTIG scf320043576328 62873 correct 80249724 80286709 1 37078 NC_000014.9 scf320043576329 99.75 True fake: scaffold gap size wrong estimation (local) 80286975 80488004 37349 238485 NC_000014.9 scf320043576329 99.86 True CONTIG scf320043576329 238485 correct 24432794 24450299 17508 10 NC_000014.9 scf320043576330 99.42 True fake: scaffold gap size wrong estimation (local) 24207754 24432138 242753 18102 NC_000014.9 scf320043576330 99.63 True CONTIG scf320043576330 242753 correct 28640290 28664105 1 23816 NC_000014.9 scf320043576331 99.89 True fake: scaffold gap size wrong estimation (local) 28664535 28766561 24214 126258 NC_000014.9 scf320043576331 99.75 True fake: scaffold gap size wrong estimation (local) 28767725 28990444 127281 350080 NC_000014.9 scf320043576331 99.93 True CONTIG scf320043576331 350080 correct 27678777 27707468 28703 1 NC_000014.9 scf320043576332 99.84 True CONTIG scf320043576332 28742 correct 56596768 56638593 41861 1 NC_000014.9 scf320043576333 99.89 True CONTIG scf320043576333 41861 correct 48415336 48482155 16 67193 NC_000014.9 scf320043576334 99.26 True CONTIG scf320043576334 67193 correct 83270221 83642258 1 372259 NC_000014.9 scf320043576335 99.8 True CONTIG scf320043576335 372259 correct 47800500 47901751 100970 1 NC_000014.9 scf320043576336 99.49 True CONTIG scf320043576336 100993 correct 30404831 30474934 69965 1 NC_000014.9 scf320043576337 99.52 True CONTIG scf320043576337 69965 correct 76101527 76122171 1 20639 NC_000014.9 scf320043576338 99.85 True CONTIG scf320043576338 20643 correct 101972741 102058607 85887 1 NC_000014.9 scf320043576339 99.94 True fake: scaffold gap size wrong estimation (local) 101970657 101971980 88136 86814 NC_000014.9 scf320043576339 99.92 True CONTIG scf320043576339 88136 correct 22789620 22916627 126637 1 NC_000014.9 scf320043576340 99.0 True CONTIG scf320043576340 126637 correct 39589716 39601773 1 12065 NC_000014.9 scf320043576341 99.92 True fake: scaffold gap size wrong estimation (local) 39602385 39629476 12641 39730 NC_000014.9 scf320043576341 99.93 True CONTIG scf320043576341 39730 correct 59556809 59661279 29 104758 NC_000014.9 scf320043576342 99.66 True CONTIG scf320043576342 104758 correct 31720806 31754847 34126 8 NC_000014.9 scf320043576343 99.55 True CONTIG scf320043576343 34126 correct 22055239 22225479 169886 1 NC_000014.9 scf320043576344 99.54 True fake: scaffold gap size wrong estimation (local) 21899381 22054732 325715 170330 NC_000014.9 scf320043576344 99.8 True fake: scaffold gap size wrong estimation (local) 21898262 21898848 326917 326331 NC_000014.9 scf320043576344 98.13 True CONTIG scf320043576344 326917 correct 96432215 96457077 24613 1 NC_000014.9 scf320043576345 98.64 True CONTIG scf320043576345 24623 correct 85317274 85476268 159083 1 NC_000014.9 scf320043576346 99.85 True fake: scaffold gap size wrong estimation (local) 85054936 85317068 421492 159279 NC_000014.9 scf320043576346 99.81 True CONTIG scf320043576346 421492 correct 88448417 88456073 7656 1 NC_000014.9 scf320043576347 99.95 True CONTIG scf320043576347 7656 correct 84192449 84257661 65159 1 NC_000014.9 scf320043576348 99.76 True fake: scaffold gap size wrong estimation (local) 84141736 84192381 116046 65312 NC_000014.9 scf320043576348 99.79 True relocation, inconsistency = 1753834 85946216 86001593 116047 171404 NC_000014.9 scf320043576348 99.86 True fake: scaffold gap size wrong estimation (local) 86001650 86075557 171450 245545 NC_000014.9 scf320043576348 99.65 True CONTIG scf320043576348 245545 misassembled 45483027 45546163 63194 15 NC_000014.9 scf320043576349 99.86 True CONTIG scf320043576349 63195 correct 58023921 58032719 8801 3 NC_000014.9 scf320043576350 99.82 True CONTIG scf320043576350 8801 correct 85891259 85946108 1 54932 NC_000014.9 scf320043576351 99.75 True CONTIG scf320043576351 54932 correct 34371860 34411565 39694 1 NC_000014.9 scf320043576352 99.89 True CONTIG scf320043576352 39707 correct 30668325 30684824 16499 1 NC_000014.9 scf320043576353 99.97 True CONTIG scf320043576353 16499 correct 37955269 38003646 35 48413 NC_000014.9 scf320043576354 99.98 True CONTIG scf320043576354 48413 correct 39630697 39635544 1 4848 NC_000014.9 scf320043576355 99.88 True CONTIG scf320043576355 4850 correct 101832388 101853329 1 20984 NC_000014.9 scf320043576356 99.82 True CONTIG scf320043576356 20984 correct 21756431 21758246 13 1827 NC_000014.9 scf320043576357 98.73 True indel: indel (<= 5bp) 21758493 21897336 2073 140858 NC_000014.9 scf320043576357 99.56 True CONTIG scf320043576357 140858 correct 106407426 106419134 1 11695 NC_000014.9 scf320043576358 99.67 True CONTIG scf320043576358 11713 correct 44512220 44544643 1 32374 NC_000014.9 scf320043576359 99.7 True fake: scaffold gap size wrong estimation (local) 44545292 44549552 33227 37487 NC_000014.9 scf320043576359 99.95 True fake: scaffold gap size wrong estimation (local) 44550067 44552446 37967 40346 NC_000014.9 scf320043576359 99.83 True CONTIG scf320043576359 40375 correct 88372223 88445177 72827 1 NC_000014.9 scf320043576360 99.72 True CONTIG scf320043576360 72844 correct 30479759 30668118 188387 1 NC_000014.9 scf320043576361 99.95 True CONTIG scf320043576361 188387 correct 19191318 19230018 38753 35 NC_000014.9 scf320043576362 99.49 True CONTIG scf320043576362 38753 correct 20015513 20039526 1 23892 NC_000014.9 scf320043576363 99.15 True CONTIG scf320043576363 23909 correct 105698364 105705913 7557 1 NC_000014.9 scf320043576364 99.51 True CONTIG scf320043576364 7982 correct 70249340 70251617 2273 1 NC_000014.9 scf320043576365 98.9 True indel: indel (> 5bp) 70246839 70248988 4747 2601 NC_000014.9 scf320043576365 99.21 True CONTIG scf320043576365 4747 correct 44554584 44641940 1 87235 NC_000014.9 scf320043576366 99.66 True CONTIG scf320043576366 87237 correct 24007124 24021183 13776 1 NC_000014.9 scf320043576367 96.55 True CONTIG scf320043576367 13776 correct 19964046 20018663 1 54429 NC_000014.9 scf320043576368 99.48 True CONTIG scf320043576368 54436 correct 52257529 52385971 1 128531 NC_000014.9 scf320043576369 99.81 True CONTIG scf320043576369 128531 correct 42413182 42426657 13493 18 NC_000014.9 scf320043576370 99.96 True CONTIG scf320043576370 13493 correct 63141197 63161706 18 20265 NC_000014.9 scf320043576371 98.57 True CONTIG scf320043576371 20265 correct 52159860 52167887 1 8003 NC_000014.9 scf320043576372 98.83 True fake: scaffold gap size wrong estimation (local) 52168619 52201049 8590 41342 NC_000014.9 scf320043576372 99.23 True CONTIG scf320043576372 41359 correct 59415419 59447522 1 31570 NC_000014.9 scf320043576373 97.94 True CONTIG scf320043576373 31570 correct 34101551 34150527 48973 1 NC_000014.9 scf320043576374 99.92 True fake: scaffold gap size wrong estimation (local) 34079193 34101183 71215 49312 NC_000014.9 scf320043576374 99.54 True fake: scaffold gap size wrong estimation (local) 34048080 34079086 102836 71685 NC_000014.9 scf320043576374 99.58 True fake: scaffold gap size wrong estimation (local) 34027581 34046427 123345 104501 NC_000014.9 scf320043576374 99.88 True fake: scaffold gap size wrong estimation (local) 33854261 34027231 297358 123996 NC_000014.9 scf320043576374 99.68 True fake: scaffold gap size wrong estimation (local) 33830524 33853777 321218 297853 NC_000014.9 scf320043576374 99.44 True fake: scaffold gap size wrong estimation (local) 33800624 33830377 350716 321254 NC_000014.9 scf320043576374 98.51 True fake: scaffold gap size wrong estimation (local) 33498507 33800482 653017 350827 NC_000014.9 scf320043576374 99.86 True CONTIG scf320043576374 653018 correct 101748556 101761506 1 12961 NC_000014.9 scf320043576375 100.0 True fake: scaffold gap size wrong estimation (local) 101761964 101782215 13356 33607 NC_000014.9 scf320043576375 99.96 True fake: scaffold gap size wrong estimation (local) 101782647 101813102 34312 64710 NC_000014.9 scf320043576375 99.81 True CONTIG scf320043576375 64710 correct 22738653 22789633 51397 1 NC_000014.9 scf320043576376 99.06 True CONTIG scf320043576376 51397 correct 44025677 44035466 23 9810 NC_000014.9 scf320043576377 99.91 True CONTIG scf320043576377 9810 correct 26111204 26296344 9 184892 NC_000014.9 scf320043576378 99.63 True CONTIG scf320043576378 184892 correct 105614629 105616190 41 1599 NC_000014.9 scf320043576379 98.08 True local misassembly 105618012 105618618 3182 3776 NC_000014.9 scf320043576379 96.38 True relocation, scaffold gap is present, inconsistency = 42914 105662182 105663590 4426 5834 NC_000014.9 scf320043576379 99.01 True fake: scaffold gap size wrong estimation (local) 105663884 105670138 6174 12427 NC_000014.9 scf320043576379 98.75 True relocation, inconsistency = -43780 105626359 105627738 12428 13807 NC_000014.9 scf320043576379 97.54 True CONTIG scf320043576379 14411 misassembled 86099641 86106394 1 6743 NC_000014.9 scf320043576380 99.53 True CONTIG scf320043576380 6743 correct 98986283 98987079 1 777 NC_000014.9 scf320043576381 96.99 True CONTIG scf320043576381 781 correct 54323820 54443324 119549 1 NC_000014.9 scf320043576382 99.89 True fake: scaffold gap size wrong estimation (local) 54239582 54323723 203923 119787 NC_000014.9 scf320043576382 99.9 True CONTIG scf320043576382 203923 correct 18364911 18428776 24 63891 NC_000014.9 scf320043576383 99.92 True CONTIG scf320043576383 63981 correct 18352648 18364752 1 12107 NC_000014.9 scf320043576384 99.98 True CONTIG scf320043576384 12107 correct 31931714 31994042 62343 1 NC_000014.9 scf320043576385 99.68 True fake: scaffold gap size wrong estimation (local) 31798792 31931578 195364 62587 NC_000014.9 scf320043576385 99.82 True CONTIG scf320043576385 195364 correct 56673311 56843090 3 169971 NC_000014.9 scf320043576386 99.74 True relocation, inconsistency = -28588978 28254113 28295330 169972 211248 NC_000014.9 scf320043576386 99.84 True fake: scaffold gap size wrong estimation (local) 28295929 28312879 211936 228884 NC_000014.9 scf320043576386 99.87 True CONTIG scf320043576386 228884 misassembled 31663913 31720904 57111 1 NC_000014.9 scf320043576387 99.69 True CONTIG scf320043576387 57131 correct 42999975 43062789 63249 512 NC_000014.9 scf320043576388 99.3 True CONTIG scf320043576388 63249 correct 32475926 32514612 38691 1 NC_000014.9 scf320043576389 99.73 True fake: scaffold gap size wrong estimation (local) 32237449 32475443 277046 39061 NC_000014.9 scf320043576389 99.76 True CONTIG scf320043576389 277080 correct 105624618 105630222 1 5558 NC_000014.9 scf320043576390 96.65 True CONTIG scf320043576390 5563 correct 81756393 81859801 103697 1 NC_000014.9 scf320043576391 99.68 True fake: scaffold gap size wrong estimation (local) 81653237 81756312 206904 103762 NC_000014.9 scf320043576391 99.87 True CONTIG scf320043576391 206904 correct 89362373 89490603 128435 1 NC_000014.9 scf320043576392 99.05 True local misassembly 89222025 89360568 267669 129196 NC_000014.9 scf320043576392 99.72 True relocation, inconsistency = 3489172 85476251 85732852 267670 524145 NC_000014.9 scf320043576392 99.61 True CONTIG scf320043576392 524193 misassembled 48485833 48701548 215719 1 NC_000014.9 scf320043576393 99.78 True CONTIG scf320043576393 215719 correct 38193665 38447486 485 254496 NC_000014.9 scf320043576394 99.74 True fake: scaffold gap size wrong estimation (local) 38447633 38630164 254690 437095 NC_000014.9 scf320043576394 99.81 True CONTIG scf320043576394 437095 correct 92766656 92856861 1 90198 NC_000014.9 scf320043576395 99.87 True CONTIG scf320043576395 90198 correct 26634199 26673784 41 39631 NC_000014.9 scf320043576396 99.82 True CONTIG scf320043576396 39651 correct 104526154 104653338 1 127004 NC_000014.9 scf320043576397 99.64 True fake: scaffold gap size wrong estimation (local) 104653578 104664702 127268 138392 NC_000014.9 scf320043576397 99.88 True CONTIG scf320043576397 138392 correct 40610435 40636204 25790 1 NC_000014.9 scf320043576398 99.81 True indel: indel (<= 5bp) 40607408 40610176 28807 26051 NC_000014.9 scf320043576398 99.28 True CONTIG scf320043576398 28807 correct 106482605 106498557 1 15904 NC_000014.9 scf320043576399 99.47 True fake: scaffold gap size wrong estimation (local) 106498652 106569160 15987 86524 NC_000014.9 scf320043576399 99.24 True CONTIG scf320043576399 86524 correct 18653141 18665677 1 12536 NC_000014.9 scf320043576400 99.68 True CONTIG scf320043576400 12536 correct 53302745 53322320 19574 1 NC_000014.9 scf320043576401 99.8 True CONTIG scf320043576401 19574 correct 20040144 20041085 1 942 NC_000014.9 scf320043576402 99.68 True fake: scaffold gap size wrong estimation (local) 20041504 20086337 1369 46206 NC_000014.9 scf320043576402 99.77 True CONTIG scf320043576402 46213 correct 37770936 37782265 11111 1 NC_000014.9 scf320043576403 97.85 True CONTIG scf320043576403 11111 correct 45607881 45800096 29 191235 NC_000014.9 scf320043576404 98.92 True indel: indel (> 5bp) 45800189 45823459 191260 214117 NC_000014.9 scf320043576404 98.08 True fake: scaffold gap size wrong estimation (local) 45823930 45859382 214613 250130 NC_000014.9 scf320043576404 99.69 True fake: scaffold gap size wrong estimation (local) 45860157 45884196 250758 274839 NC_000014.9 scf320043576404 99.61 True CONTIG scf320043576404 274839 correct 59446614 59515648 495 69705 NC_000014.9 scf320043576405 99.51 True CONTIG scf320043576405 69705 correct 106362061 106370701 1 8641 NC_000014.9 scf320043576406 99.68 True CONTIG scf320043576406 8641 correct 46547264 46547958 695 1 NC_000014.9 scf320043576407 100.0 True CONTIG scf320043576407 703 correct 105907953 105915402 1 7450 NC_000014.9 scf320043576408 99.97 True CONTIG scf320043576408 7450 correct 56843019 56988301 1 145629 NC_000014.9 scf320043576409 99.73 True fake: scaffold gap size wrong estimation (local) 56988659 57104189 146001 261419 NC_000014.9 scf320043576409 99.65 True CONTIG scf320043576409 261419 correct 103047904 103057254 12 9373 NC_000014.9 scf320043576410 99.82 True fake: scaffold gap size wrong estimation (local) 103057495 103123332 9587 74753 NC_000014.9 scf320043576410 98.41 True fake: scaffold gap size wrong estimation (local) 103123445 103127083 74841 78479 NC_000014.9 scf320043576410 99.95 True fake: scaffold gap size wrong estimation (local) 103127336 103144984 78681 96355 NC_000014.9 scf320043576410 99.11 True fake: scaffold gap size wrong estimation (local) 103145183 103204881 96686 156287 NC_000014.9 scf320043576410 99.58 True fake: scaffold gap size wrong estimation (local) 103205637 103207422 156998 158783 NC_000014.9 scf320043576410 99.32 True relocation, inconsistency = 71734 103279157 103334650 158784 214013 NC_000014.9 scf320043576410 98.76 True fake: scaffold gap size wrong estimation (local) 103334780 103452489 214128 331739 NC_000014.9 scf320043576410 99.38 True fake: scaffold gap size wrong estimation (local) 103452607 103601185 331842 481098 NC_000014.9 scf320043576410 99.55 True fake: scaffold gap size wrong estimation (local) 103601894 103603944 481855 483905 NC_000014.9 scf320043576410 99.9 True CONTIG scf320043576410 483905 misassembled 25172586 25186309 13685 1 NC_000014.9 scf320043576411 99.52 True CONTIG scf320043576411 13685 correct 53383638 53428698 44934 8 NC_000014.9 scf320043576412 99.55 True CONTIG scf320043576412 44934 correct 21609071 21632280 23211 1 NC_000014.9 scf320043576413 99.65 True CONTIG scf320043576413 23229 correct 54806897 54870819 63941 1 NC_000014.9 scf320043576414 99.68 True CONTIG scf320043576414 63941 correct 72707146 72912802 1 206004 NC_000014.9 scf320043576415 99.6 True fake: scaffold gap size wrong estimation (local) 72912875 72952711 206066 245981 NC_000014.9 scf320043576415 99.53 True local misassembly 72953014 72988948 245982 282083 NC_000014.9 scf320043576415 99.75 True CONTIG scf320043576415 282083 correct 34547850 34553733 10 5917 NC_000014.9 scf320043576416 99.39 True CONTIG scf320043576416 5917 correct 71848425 71874316 25861 1 NC_000014.9 scf320043576417 99.51 True CONTIG scf320043576417 25881 correct 71981764 72397495 415886 1 NC_000014.9 scf320043576418 99.73 True CONTIG scf320043576418 415886 correct 40954505 41036536 82052 1 NC_000014.9 scf320043576419 99.77 True CONTIG scf320043576419 82063 correct 105609386 105610502 1445 329 NC_000014.9 scf320043576420 98.66 True indel: indel (<= 5bp) 105606565 105609385 4267 1447 NC_000014.9 scf320043576420 98.58 True indel: indel (<= 5bp) 105603783 105606563 7048 4268 NC_000014.9 scf320043576420 99.71 True indel: indel (<= 5bp) 105598963 105603777 11863 7049 NC_000014.9 scf320043576420 99.9 True indel: indel (<= 5bp) 105597121 105598959 13702 11864 NC_000014.9 scf320043576420 99.56 True indel: indel (> 5bp) 105594664 105596997 16241 13908 NC_000014.9 scf320043576420 99.74 True local misassembly 105591059 105593442 18625 16242 NC_000014.9 scf320043576420 99.5 True CONTIG scf320043576420 18963 correct 30332076 30364357 32307 1 NC_000014.9 scf320043576421 99.85 True CONTIG scf320043576421 32307 correct 59518238 59553601 35360 1 NC_000014.9 scf320043576422 99.84 True CONTIG scf320043576422 35378 correct CONTIG scf320043576423 461 unaligned 51764426 51772767 8341 1 NC_000014.9 scf320043576424 99.93 True CONTIG scf320043576424 8341 correct 46011518 46012611 1094 1 NC_000014.9 scf320043576425 99.63 True fake: scaffold gap size wrong estimation (local) 45887981 46011044 124534 1454 NC_000014.9 scf320043576425 99.22 True CONTIG scf320043576425 124534 correct 106193978 106206386 1 12415 NC_000014.9 scf320043576426 99.4 True fake: scaffold gap size wrong estimation (local) 106206478 106244077 12949 50459 NC_000014.9 scf320043576426 99.35 True CONTIG scf320043576426 50459 correct 106113012 106116354 5000 8344 NC_000014.9 scf320043576427 97.94 True indel: indel (<= 5bp) 106116411 106136221 8398 28240 NC_000014.9 scf320043576427 99.66 True fake: scaffold gap size wrong estimation (local) 106136411 106141904 28366 33955 NC_000014.9 scf320043576427 99.0 True fake: scaffold gap size wrong estimation (local) 106142119 106153245 34272 45373 NC_000014.9 scf320043576427 99.36 True fake: scaffold gap size wrong estimation (local) 106153328 106166299 46640 59617 NC_000014.9 scf320043576427 99.31 True fake: scaffold gap size wrong estimation (local) 106166409 106179639 59715 72843 NC_000014.9 scf320043576427 98.8 True fake: scaffold gap size wrong estimation (local) 106179827 106193548 73072 86869 NC_000014.9 scf320043576427 99.58 True CONTIG scf320043576427 86869 correct 73883189 73955053 71756 1 NC_000014.9 scf320043576428 99.26 True fake: scaffold gap size wrong estimation (local) 73781689 73882914 173647 72059 NC_000014.9 scf320043576428 99.44 True fake: scaffold gap size wrong estimation (local) 73779723 73781606 175652 173769 NC_000014.9 scf320043576428 98.83 True local misassembly 73769904 73772794 178823 175933 NC_000014.9 scf320043576428 99.9 True indel: indel (<= 5bp) 73768514 73769901 180211 178824 NC_000014.9 scf320043576428 99.93 True indel: indel (<= 5bp) 73766855 73768511 181868 180212 NC_000014.9 scf320043576428 100.0 True fake: scaffold gap size wrong estimation (local) 73764341 73766854 184422 181909 NC_000014.9 scf320043576428 99.92 True indel: indel (<= 5bp) 73760139 73764339 188623 184423 NC_000014.9 scf320043576428 100.0 True indel: indel (<= 5bp) 73757280 73760137 191481 188624 NC_000014.9 scf320043576428 99.97 True indel: indel (> 5bp) 73756296 73757279 192482 191499 NC_000014.9 scf320043576428 100.0 True indel: indel (> 5bp) 73749586 73756295 199204 192495 NC_000014.9 scf320043576428 99.67 True indel: indel (> 5bp) 73748771 73749370 200010 199411 NC_000014.9 scf320043576428 99.83 True indel: indel (<= 5bp) 73737775 73748768 211004 200011 NC_000014.9 scf320043576428 99.91 True indel: indel (<= 5bp) 73728258 73737773 220520 211005 NC_000014.9 scf320043576428 99.84 True indel: indel (<= 5bp) 73720238 73728254 228537 220521 NC_000014.9 scf320043576428 99.94 True fake: scaffold gap size wrong estimation (local) 73717935 73719828 231146 229253 NC_000014.9 scf320043576428 99.84 True indel: indel (<= 5bp) 73716711 73717934 232371 231148 NC_000014.9 scf320043576428 99.84 True indel: indel (<= 5bp) 73709317 73716682 239762 232397 NC_000014.9 scf320043576428 99.9 True indel: stretch of mismatches 73707971 73709113 241108 239966 NC_000014.9 scf320043576428 99.91 True indel: indel (<= 5bp) 73707076 73707970 242004 241110 NC_000014.9 scf320043576428 99.78 True CONTIG scf320043576428 242004 correct 21541585 21611554 70456 177 NC_000014.9 scf320043576429 99.35 True fake: scaffold gap size wrong estimation (local) 21277345 21541392 334692 70601 NC_000014.9 scf320043576429 99.72 True CONTIG scf320043576429 334695 correct 23585357 23736815 1 151412 NC_000014.9 scf320043576430 99.68 True indel: indel (> 5bp) 23736853 23739511 151413 154117 NC_000014.9 scf320043576430 99.47 True fake: scaffold gap size wrong estimation (local) 23740177 23741928 154775 156526 NC_000014.9 scf320043576430 99.83 True CONTIG scf320043576430 156526 correct 71876514 71961713 1 85313 NC_000014.9 scf320043576431 99.71 True fake: scaffold gap size wrong estimation (local) 71961998 71976498 85524 100021 NC_000014.9 scf320043576431 99.93 True CONTIG scf320043576431 100021 correct 81864711 82348314 1 480460 NC_000014.9 scf320043576432 98.88 True CONTIG scf320043576432 480460 correct 66777927 66835270 57323 1 NC_000014.9 scf320043576433 99.96 True fake: scaffold gap size wrong estimation (local) 66585799 66777473 249723 57962 NC_000014.9 scf320043576433 99.96 True CONTIG scf320043576433 249723 correct 89701719 90207694 506942 1 NC_000014.9 scf320043576434 99.52 True fake: scaffold gap size wrong estimation (local) 89553241 89701625 655437 507037 NC_000014.9 scf320043576434 99.71 True CONTIG scf320043576434 655437 correct 57670916 58026810 1 355802 NC_000014.9 scf320043576435 99.8 True CONTIG scf320043576435 355802 correct 36282956 36407772 1 124695 NC_000014.9 scf320043576436 99.73 True CONTIG scf320043576436 124725 correct 87429759 87598473 1 168762 NC_000014.9 scf320043576437 99.77 True fake: scaffold gap size wrong estimation (local) 87598902 88124764 169138 694950 NC_000014.9 scf320043576437 99.69 True CONTIG scf320043576437 694950 correct 32939222 33498587 559715 25 NC_000014.9 scf320043576438 99.76 True fake: scaffold gap size wrong estimation (local) 32934879 32938784 564023 560110 NC_000014.9 scf320043576438 99.49 True fake: scaffold gap size wrong estimation (local) 32854472 32934744 644286 564120 NC_000014.9 scf320043576438 99.62 True CONTIG scf320043576438 644286 correct 93417383 93459891 44 42596 NC_000014.9 scf320043576439 99.74 True indel: stretch of mismatches 93460072 93986587 42777 569301 NC_000014.9 scf320043576439 99.75 True fake: scaffold gap size wrong estimation (local) 93986831 94145505 569435 728109 NC_000014.9 scf320043576439 99.88 True fake: scaffold gap size wrong estimation (local) 94145664 94173998 728288 756624 NC_000014.9 scf320043576439 99.93 True fake: scaffold gap size wrong estimation (local) 94174362 94346146 756944 928881 NC_000014.9 scf320043576439 99.85 True fake: scaffold gap size wrong estimation (local) 94346177 94363763 929249 946706 NC_000014.9 scf320043576439 99.0 True CONTIG scf320043576439 946706 correct 63585705 63749590 164671 61 NC_000014.9 scf320043576440 99.72 True local misassembly 63545815 63585145 204176 164672 NC_000014.9 scf320043576440 98.1 True fake: scaffold gap size wrong estimation (local) 63484289 63545651 265562 204290 NC_000014.9 scf320043576440 99.62 True fake: scaffold gap size wrong estimation (local) 63159625 63483882 589929 265918 NC_000014.9 scf320043576440 99.66 True CONTIG scf320043576440 589949 correct 87235259 87356410 1 121363 NC_000014.9 scf320043576441 99.58 True CONTIG scf320043576441 122558 correct 85844867 85885944 39837 1 NC_000014.9 scf320043576442 96.78 True fake: scaffold gap size wrong estimation (local) 85829914 85844738 54732 39971 NC_000014.9 scf320043576442 99.51 True indel: stretch of mismatches 85826967 85829754 57667 54892 NC_000014.9 scf320043576442 99.43 True CONTIG scf320043576442 57667 correct 26486697 26628786 142031 1 NC_000014.9 scf320043576443 99.75 True fake: scaffold gap size wrong estimation (local) 26300071 26486532 328693 142090 NC_000014.9 scf320043576443 99.69 True CONTIG scf320043576443 328693 correct 105859219 105863362 4172 1 NC_000014.9 scf320043576444 99.61 True relocation, inconsistency = 149418 105708624 105709796 5349 4177 NC_000014.9 scf320043576444 99.57 True CONTIG scf320043576444 5349 misassembled 26678525 26867508 189083 1 NC_000014.9 scf320043576445 99.53 True CONTIG scf320043576445 189083 correct 45550984 45606102 1 55100 NC_000014.9 scf320043576446 99.85 True CONTIG scf320043576446 55106 correct 34510921 34527024 16320 10 NC_000014.9 scf320043576447 98.65 True fake: scaffold gap size wrong estimation (local) 34413600 34510666 112940 16554 NC_000014.9 scf320043576447 99.0 True CONTIG scf320043576447 112941 correct 41197234 41209588 12385 1 NC_000014.9 scf320043576448 99.72 True fake: scaffold gap size wrong estimation (local) 41062474 41196686 147200 12988 NC_000014.9 scf320043576448 99.58 True fake: scaffold gap size wrong estimation (local) 41033500 41062368 176289 147337 NC_000014.9 scf320043576448 99.15 True CONTIG scf320043576448 176289 correct 70553526 70641937 9 88424 NC_000014.9 scf320043576449 99.65 True fake: scaffold gap size wrong estimation (local) 70642202 70703389 88660 149764 NC_000014.9 scf320043576449 99.62 True fake: scaffold gap size wrong estimation (local) 70703526 70798496 149864 244841 NC_000014.9 scf320043576449 99.83 True fake: scaffold gap size wrong estimation (local) 70798689 70907515 245094 354534 NC_000014.9 scf320043576449 99.38 True fake: scaffold gap size wrong estimation (local) 70907841 71037908 354784 484803 NC_000014.9 scf320043576449 99.36 True fake: scaffold gap size wrong estimation (local) 71038195 71043491 485308 490441 NC_000014.9 scf320043576449 96.54 True CONTIG scf320043576449 490441 correct 66030587 66100140 69526 1 NC_000014.9 scf320043576450 99.86 True CONTIG scf320043576450 70255 correct 39022187 39197865 1 175832 NC_000014.9 scf320043576451 99.66 True fake: scaffold gap size wrong estimation (local) 39197997 39285409 175900 263339 NC_000014.9 scf320043576451 99.66 True CONTIG scf320043576451 263339 correct 27861193 27921370 1 60177 NC_000014.9 scf320043576452 99.92 True fake: scaffold gap size wrong estimation (local) 27921003 28038557 60748 178271 NC_000014.9 scf320043576452 99.88 True fake: scaffold gap size wrong estimation (local) 28038690 28149112 178413 288562 NC_000014.9 scf320043576452 99.58 True fake: scaffold gap size wrong estimation (local) 28149315 28188888 288732 328183 NC_000014.9 scf320043576452 99.45 True CONTIG scf320043576452 328183 correct 59836307 59853882 1 17573 NC_000014.9 scf320043576453 99.91 True fake: scaffold gap size wrong estimation (local) 59854503 59891956 18173 54088 NC_000014.9 scf320043576453 95.77 True CONTIG scf320043576453 54094 correct 34556036 34568161 1 12091 NC_000014.9 scf320043576454 99.4 True CONTIG scf320043576454 12099 correct 49032063 49080806 48742 1 NC_000014.9 scf320043576455 99.95 True fake: scaffold gap size wrong estimation (local) 49023146 49031512 57568 49202 NC_000014.9 scf320043576455 99.92 True local misassembly 48938982 49020564 139274 57664 NC_000014.9 scf320043576455 99.78 True fake: scaffold gap size wrong estimation (local) 48702175 48938541 377448 140848 NC_000014.9 scf320043576455 99.8 True CONTIG scf320043576455 377448 correct 47626667 47795197 168766 1 NC_000014.9 scf320043576456 99.51 True fake: scaffold gap size wrong estimation (local) 47299403 47626660 496388 168925 NC_000014.9 scf320043576456 99.76 True fake: scaffold gap size wrong estimation (local) 47177059 47298796 618690 496996 NC_000014.9 scf320043576456 99.87 True CONTIG scf320043576456 618691 correct 81038696 81072834 54 34199 NC_000014.9 scf320043576457 99.91 True fake: scaffold gap size wrong estimation (local) 81073028 81115907 34358 77248 NC_000014.9 scf320043576457 99.79 True CONTIG scf320043576457 77248 correct 55382322 55456325 1 74614 NC_000014.9 scf320043576458 99.14 True fake: scaffold gap size wrong estimation (local) 55456819 55580160 75092 198426 NC_000014.9 scf320043576458 99.79 True fake: scaffold gap size wrong estimation (local) 55580486 55675849 198742 294324 NC_000014.9 scf320043576458 99.77 True CONTIG scf320043576458 294324 correct 51414436 51415502 87 1153 NC_000014.9 scf320043576459 100.0 True indel: indel (> 5bp) 51415582 51486260 1226 71992 NC_000014.9 scf320043576459 99.71 True relocation, scaffold gap is present, inconsistency = 52117217 103603507 103649584 72022 118182 NC_000014.9 scf320043576459 99.6 True fake: scaffold gap size wrong estimation (local) 103649748 103687645 118299 156289 NC_000014.9 scf320043576459 99.73 True CONTIG scf320043576459 156289 misassembled 31993920 32077137 73 83244 NC_000014.9 scf320043576460 99.8 True fake: scaffold gap size wrong estimation (local) 32077347 32140129 83405 146394 NC_000014.9 scf320043576460 99.68 True relocation, scaffold gap is present, inconsistency = 8213831 40354081 40377313 169669 146431 NC_000014.9 scf320043576460 99.88 True relocation, inconsistency = 8154363 32140124 32199717 169670 229252 NC_000014.9 scf320043576460 99.84 True fake: scaffold gap size wrong estimation (local) 32199818 32235726 229396 265131 NC_000014.9 scf320043576460 99.45 True CONTIG scf320043576460 265131 misassembled 81649938 81656477 6547 1 NC_000014.9 scf320043576461 99.79 True fake: scaffold gap size wrong estimation (local) 81546392 81649622 111248 7872 NC_000014.9 scf320043576461 99.68 True CONTIG scf320043576461 111274 correct 93159814 93169804 9998 1 NC_000014.9 scf320043576462 99.84 True fake: scaffold gap size wrong estimation (local) 93115954 93158797 53731 10864 NC_000014.9 scf320043576462 99.37 True fake: scaffold gap size wrong estimation (local) 93102892 93115477 66891 54066 NC_000014.9 scf320043576462 98.54 True fake: scaffold gap size wrong estimation (local) 93059796 93102632 109891 67018 NC_000014.9 scf320043576462 99.9 True fake: scaffold gap size wrong estimation (local) 92911928 93058481 257733 111150 NC_000014.9 scf320043576462 99.86 True fake: scaffold gap size wrong estimation (local) 92873045 92911149 296621 258518 NC_000014.9 scf320043576462 99.87 True CONTIG scf320043576462 296621 correct 90851129 91275838 1 424855 NC_000014.9 scf320043576463 99.61 True fake: scaffold gap size wrong estimation (local) 91276025 91417703 424975 568068 NC_000014.9 scf320043576463 99.23 True fake: scaffold gap size wrong estimation (local) 91417958 91431283 568218 581540 NC_000014.9 scf320043576463 99.89 True CONTIG scf320043576463 581540 correct 35850212 35977628 1 125897 NC_000014.9 scf320043576464 97.7 True fake: scaffold gap size wrong estimation (local) 35978658 36057277 126845 205637 NC_000014.9 scf320043576464 99.64 True CONTIG scf320043576464 205637 correct 106765004 106765527 6957 7480 NC_000014.9 scf320043576465 96.18 True CONTIG scf320043576465 28015 correct_unaligned 45326431 45466966 1 139544 NC_000014.9 scf320043576466 99.19 True CONTIG scf320043576466 139544 correct 49656132 49761132 104848 60 NC_000014.9 scf320043576467 99.4 True CONTIG scf320043576467 104926 correct 35824934 35853723 28837 1 NC_000014.9 scf320043576468 99.88 True fake: scaffold gap size wrong estimation (local) 35680719 35824417 173118 29352 NC_000014.9 scf320043576468 99.91 True fake: scaffold gap size wrong estimation (local) 35626678 35680429 227063 173314 NC_000014.9 scf320043576468 99.98 True relocation, scaffold gap is present, inconsistency = 85535 35465370 35541122 302838 227084 NC_000014.9 scf320043576468 99.82 True CONTIG scf320043576468 302838 misassembled 28317674 28614683 1 297444 NC_000014.9 scf320043576469 99.57 True fake: scaffold gap size wrong estimation (local) 28615123 28638657 297812 321386 NC_000014.9 scf320043576469 99.8 True CONTIG scf320043576469 321386 correct 80038906 80090732 52348 1 NC_000014.9 scf320043576470 99.01 True CONTIG scf320043576470 52348 correct 52393927 52504555 110725 1 NC_000014.9 scf320043576471 99.87 True CONTIG scf320043576471 110725 correct 34277990 34294662 16710 1 NC_000014.9 scf320043576472 99.72 True fake: scaffold gap size wrong estimation (local) 34195214 34277787 99145 16849 NC_000014.9 scf320043576472 99.22 True relocation, scaffold gap is present, inconsistency = -10317562 44473298 44512755 138502 99166 NC_000014.9 scf320043576472 99.58 True CONTIG scf320043576472 138502 misassembled 40268633 40327720 59098 1 NC_000014.9 scf320043576473 99.93 True CONTIG scf320043576473 59098 correct 49147270 49535113 1 387988 NC_000014.9 scf320043576474 99.78 True CONTIG scf320043576474 387988 correct 86245838 86252860 7038 1 NC_000014.9 scf320043576475 99.23 True fake: scaffold gap size wrong estimation (local) 86110395 86245635 142448 7219 NC_000014.9 scf320043576475 99.79 True CONTIG scf320043576475 142448 correct 44897744 45321401 423493 1 NC_000014.9 scf320043576476 99.7 True fake: scaffold gap size wrong estimation (local) 44710594 44897394 610758 423839 NC_000014.9 scf320043576476 99.88 True CONTIG scf320043576476 610758 correct 73585822 73629733 1 43942 NC_000014.9 scf320043576477 99.72 True CONTIG scf320043576477 43942 correct 90816088 90845656 29101 1 NC_000014.9 scf320043576478 98.25 True fake: scaffold gap size wrong estimation (local) 90709035 90816070 136657 29214 NC_000014.9 scf320043576478 99.36 True fake: scaffold gap size wrong estimation (local) 90695145 90708902 150873 137047 NC_000014.9 scf320043576478 99.02 True fake: scaffold gap size wrong estimation (local) 90343842 90694799 501906 150942 NC_000014.9 scf320043576478 99.77 True fake: scaffold gap size wrong estimation (local) 90315680 90343575 530120 502057 NC_000014.9 scf320043576478 99.47 True fake: scaffold gap size wrong estimation (local) 90250988 90315865 595790 530474 NC_000014.9 scf320043576478 99.58 True fake: scaffold gap size wrong estimation (local) 90230239 90250779 616391 595960 NC_000014.9 scf320043576478 99.36 True fake: scaffold gap size wrong estimation (local) 90211390 90229742 635168 616824 NC_000014.9 scf320043576478 99.84 True CONTIG scf320043576478 635168 correct 27758612 27861130 102532 1 NC_000014.9 scf320043576479 99.83 True fake: scaffold gap size wrong estimation (local) 27707478 27757989 153529 103023 NC_000014.9 scf320043576479 99.77 True relocation, inconsistency = -74263260 101918628 101970737 205810 153530 NC_000014.9 scf320043576479 99.7 True fake: scaffold gap size wrong estimation (local) 101852376 101918477 272127 205935 NC_000014.9 scf320043576479 99.81 True CONTIG scf320043576479 272127 misassembled 105240417 105248571 12 8067 NC_000014.9 scf320043576480 98.69 True fake: scaffold gap size wrong estimation (local) 105249063 105314570 8509 71551 NC_000014.9 scf320043576480 96.09 True fake: scaffold gap size wrong estimation (local) 105314924 105346489 71856 103180 NC_000014.9 scf320043576480 98.96 True fake: scaffold gap size wrong estimation (local) 105346966 105364388 103598 120693 NC_000014.9 scf320043576480 98.04 True fake: scaffold gap size wrong estimation (local) 105364487 105419805 120813 176193 NC_000014.9 scf320043576480 99.76 True fake: scaffold gap size wrong estimation (local) 105420313 105431772 176692 188200 NC_000014.9 scf320043576480 99.61 True fake: scaffold gap size wrong estimation (local) 105432432 105474613 188887 230243 NC_000014.9 scf320043576480 97.1 True fake: scaffold gap size wrong estimation (local) 105474786 105477661 230423 233298 NC_000014.9 scf320043576480 99.97 True fake: scaffold gap size wrong estimation (local) 105477757 105526526 234464 282767 NC_000014.9 scf320043576480 98.2 True fake: scaffold gap size wrong estimation (local) 105526808 105545128 283044 301359 NC_000014.9 scf320043576480 99.93 True relocation, scaffold gap is present, inconsistency = 123851 105669000 105676050 301380 308634 NC_000014.9 scf320043576480 97.22 True relocation, scaffold gap is present, inconsistency = -127973 105548098 105553316 308655 313872 NC_000014.9 scf320043576480 99.98 True CONTIG scf320043576480 313872 misassembled 87357622 87414653 56818 118 NC_000014.9 scf320043576481 99.2 True CONTIG scf320043576481 56818 correct 48265892 48282289 1 16398 NC_000014.9 scf320043576482 99.83 True relocation, inconsistency = 3943293 44313275 44322598 25723 16399 NC_000014.9 scf320043576482 99.46 True CONTIG scf320043576482 25723 misassembled 85005152 85019536 14382 155 NC_000014.9 scf320043576483 98.75 True fake: scaffold gap size wrong estimation (local) 84914083 85004957 105357 14565 NC_000014.9 scf320043576483 99.81 True relocation, inconsistency = 28317432 56447659 56596650 254123 105358 NC_000014.9 scf320043576483 99.5 True CONTIG scf320043576483 254123 misassembled 24113294 24193589 2 80148 NC_000014.9 scf320043576484 99.56 True fake: scaffold gap size wrong estimation (local) 24193777 24205315 80309 91893 NC_000014.9 scf320043576484 99.75 True fake: scaffold gap size wrong estimation (local) 24205443 24210764 92074 97332 NC_000014.9 scf320043576484 98.78 True CONTIG scf320043576484 97332 correct 24532012 24607621 75625 1 NC_000014.9 scf320043576485 99.92 True CONTIG scf320043576485 75625 correct 61096589 61133251 1 36682 NC_000014.9 scf320043576486 99.77 True local misassembly 61138768 61237259 36683 135243 NC_000014.9 scf320043576486 99.43 True fake: scaffold gap size wrong estimation (local) 61238120 61741412 135996 639373 NC_000014.9 scf320043576486 99.7 True fake: scaffold gap size wrong estimation (local) 61741670 62000128 639518 897874 NC_000014.9 scf320043576486 99.74 True fake: scaffold gap size wrong estimation (local) 62000375 62046058 897994 943669 NC_000014.9 scf320043576486 99.88 True fake: scaffold gap size wrong estimation (local) 62046307 62154526 943879 1052134 NC_000014.9 scf320043576486 99.78 True CONTIG scf320043576486 1052134 correct 29480912 29819503 338652 1 NC_000014.9 scf320043576487 99.8 True fake: scaffold gap size wrong estimation (local) 29479837 29480627 339626 338836 NC_000014.9 scf320043576487 99.49 True fake: scaffold gap size wrong estimation (local) 29478527 29479387 340641 339781 NC_000014.9 scf320043576487 99.65 True fake: scaffold gap size wrong estimation (local) 29466386 29478244 352783 340932 NC_000014.9 scf320043576487 99.71 True fake: scaffold gap size wrong estimation (local) 29412625 29466179 406552 353003 NC_000014.9 scf320043576487 99.93 True CONTIG scf320043576487 406552 correct 23758877 23760062 1 1186 NC_000014.9 scf320043576488 99.24 True fake: scaffold gap size wrong estimation (local) 23760166 23928185 1429 169492 NC_000014.9 scf320043576488 99.7 True fake: scaffold gap size wrong estimation (local) 23928556 23952871 169720 194024 NC_000014.9 scf320043576488 99.67 True relocation, scaffold gap is present, inconsistency = 77193 24030101 24035864 194061 199826 NC_000014.9 scf320043576488 99.81 True local misassembly 24036419 24037542 200379 201502 NC_000014.9 scf320043576488 97.78 True indel: stretch of mismatches 24037636 24039385 201596 203344 NC_000014.9 scf320043576488 98.86 True indel: indel (> 5bp) 24039580 24112047 203517 276435 NC_000014.9 scf320043576488 99.72 True CONTIG scf320043576488 276440 misassembled 88458074 88684229 1 226245 NC_000014.9 scf320043576489 99.79 True fake: scaffold gap size wrong estimation (local) 88684341 88732052 228943 276686 NC_000014.9 scf320043576489 99.9 True fake: scaffold gap size wrong estimation (local) 88732145 88761188 276800 305841 NC_000014.9 scf320043576489 99.93 True CONTIG scf320043576489 305841 correct 105902707 105906986 4280 1 NC_000014.9 scf320043576490 100.0 True relocation, scaffold gap is present, inconsistency = 37971 105863040 105864635 5976 4381 NC_000014.9 scf320043576490 99.69 True CONTIG scf320043576490 5976 misassembled 56233744 56442154 208483 41 NC_000014.9 scf320043576491 99.8 True fake: scaffold gap size wrong estimation (local) 56047685 56233583 395517 208822 NC_000014.9 scf320043576491 99.5 True fake: scaffold gap size wrong estimation (local) 56018970 56047584 424185 395555 NC_000014.9 scf320043576491 99.92 True CONTIG scf320043576491 424185 correct 20885728 20912130 26377 11 NC_000014.9 scf320043576492 99.72 True relocation, scaffold gap is present, inconsistency = -68271 20946202 20953977 34161 26399 NC_000014.9 scf320043576492 99.67 True CONTIG scf320043576492 34161 misassembled 21098720 21177803 76482 1 NC_000014.9 scf320043576493 96.51 True fake: scaffold gap size wrong estimation (local) 21025156 21098165 149728 76950 NC_000014.9 scf320043576493 99.32 True fake: scaffold gap size wrong estimation (local) 20955412 21024993 219502 149842 NC_000014.9 scf320043576493 99.73 True relocation, scaffold gap is present, inconsistency = 23380 20931112 20932011 220422 219523 NC_000014.9 scf320043576493 99.78 True fake: scaffold gap size wrong estimation (local) 20929749 20930585 221592 220756 NC_000014.9 scf320043576493 100.0 True fake: scaffold gap size wrong estimation (local) 20916564 20929079 235112 222615 NC_000014.9 scf320043576493 99.75 True CONTIG scf320043576493 235112 misassembled 86695326 86696003 678 1 NC_000014.9 scf320043576494 99.12 True indel: stretch of mismatches 86595248 86694930 100478 1074 NC_000014.9 scf320043576494 99.52 True CONTIG scf320043576494 100478 correct 63802193 64397063 17 595365 NC_000014.9 scf320043576495 99.61 True fake: scaffold gap size wrong estimation (local) 64397200 64805013 595448 1004182 NC_000014.9 scf320043576495 99.72 True fake: scaffold gap size wrong estimation (local) 64805694 64972133 1004799 1168263 NC_000014.9 scf320043576495 97.9 True fake: scaffold gap size wrong estimation (local) 64974376 64978744 1170091 1174476 NC_000014.9 scf320043576495 99.43 True fake: scaffold gap size wrong estimation (local) 64979256 65149100 1174916 1345042 NC_000014.9 scf320043576495 99.72 True fake: scaffold gap size wrong estimation (local) 65149511 65322969 1345372 1518787 NC_000014.9 scf320043576495 99.76 True local misassembly 65324348 65325298 1518788 1519738 NC_000014.9 scf320043576495 99.8 True local misassembly 65322887 65324416 1519764 1521293 NC_000014.9 scf320043576495 99.93 True fake: scaffold gap size wrong estimation (local) 65325278 65368346 1521344 1564338 NC_000014.9 scf320043576495 99.61 True fake: scaffold gap size wrong estimation (local) 65368862 65523293 1564786 1719186 NC_000014.9 scf320043576495 99.82 True fake: scaffold gap size wrong estimation (local) 65523470 65692046 1719390 1888020 NC_000014.9 scf320043576495 99.86 True fake: scaffold gap size wrong estimation (local) 65692702 65711429 1888326 1907107 NC_000014.9 scf320043576495 99.71 True CONTIG scf320043576495 1907107 correct 55863411 55988991 125581 1 NC_000014.9 scf320043576496 99.97 True fake: scaffold gap size wrong estimation (local) 55839901 55862072 149454 127250 NC_000014.9 scf320043576496 99.73 True fake: scaffold gap size wrong estimation (local) 55835594 55839668 154059 149987 NC_000014.9 scf320043576496 99.75 True fake: scaffold gap size wrong estimation (local) 55741751 55835400 247816 154173 NC_000014.9 scf320043576496 99.91 True fake: scaffold gap size wrong estimation (local) 55680328 55741675 309188 247884 NC_000014.9 scf320043576496 99.87 True CONTIG scf320043576496 309188 correct 51762999 51764521 1523 1 NC_000014.9 scf320043576497 100.0 True fake: scaffold gap size wrong estimation (local) 51651888 51762177 112855 2361 NC_000014.9 scf320043576497 99.7 True fake: scaffold gap size wrong estimation (local) 51486102 51651728 278964 113075 NC_000014.9 scf320043576497 99.75 True CONTIG scf320043576497 278969 correct 48285391 48354940 1 69822 NC_000014.9 scf320043576498 99.64 True fake: scaffold gap size wrong estimation (local) 48355169 48412072 70031 127033 NC_000014.9 scf320043576498 99.78 True CONTIG scf320043576498 127033 correct 52227389 52254731 27336 1 NC_000014.9 scf320043576499 99.84 True fake: scaffold gap size wrong estimation (local) 52213312 52227063 41286 27526 NC_000014.9 scf320043576499 99.29 True fake: scaffold gap size wrong estimation (local) 52211289 52212139 43418 42569 NC_000014.9 scf320043576499 99.29 True CONTIG scf320043576499 43418 correct 106244153 106335742 1 91091 NC_000014.9 scf320043576500 98.8 True relocation, inconsistency = 308051 106643794 106705829 91092 152848 NC_000014.9 scf320043576500 99.38 True fake: scaffold gap size wrong estimation (local) 106706104 106718598 153594 166082 NC_000014.9 scf320043576500 99.22 True CONTIG scf320043576500 166082 misassembled 20865115 20880843 1 15719 NC_000014.9 scf320043576501 99.73 True CONTIG scf320043576501 15719 correct 42093021 42152818 59802 1 NC_000014.9 scf320043576502 99.8 True fake: scaffold gap size wrong estimation (local) 42048685 42092769 103783 59893 NC_000014.9 scf320043576502 99.48 True relocation, scaffold gap is present, inconsistency = -30658475 72414024 72707139 397175 103804 NC_000014.9 scf320043576502 99.69 True CONTIG scf320043576502 397175 misassembled 35540950 35626829 86173 1 NC_000014.9 scf320043576503 99.63 True CONTIG scf320043576503 86173 correct 39950450 40241116 283555 1 NC_000014.9 scf320043576504 96.95 True relocation, inconsistency = -20985877 60912067 60936326 307845 283556 NC_000014.9 scf320043576504 99.81 True CONTIG scf320043576504 307926 misassembled 51890914 51906773 1 15857 NC_000014.9 scf320043576505 99.88 True fake: scaffold gap size wrong estimation (local) 51906962 52128081 15982 237315 NC_000014.9 scf320043576505 99.43 True fake: scaffold gap size wrong estimation (local) 52128263 52162120 237544 271407 NC_000014.9 scf320043576505 99.36 True CONTIG scf320043576505 271435 correct 71369989 71646194 1 275853 NC_000014.9 scf320043576506 99.76 True CONTIG scf320043576506 275854 correct 81462764 81546104 83345 18 NC_000014.9 scf320043576507 99.83 True fake: scaffold gap size wrong estimation (local) 81458319 81462562 87789 83553 NC_000014.9 scf320043576507 99.6 True fake: scaffold gap size wrong estimation (local) 81365817 81457983 180726 88137 NC_000014.9 scf320043576507 99.81 True CONTIG scf320043576507 180726 correct 77992107 78153687 1 161448 NC_000014.9 scf320043576508 99.73 True fake: scaffold gap size wrong estimation (local) 78153950 78224757 161758 232570 NC_000014.9 scf320043576508 99.77 True fake: scaffold gap size wrong estimation (local) 78224861 78926651 232683 934402 NC_000014.9 scf320043576508 99.76 True fake: scaffold gap size wrong estimation (local) 78926982 79053988 934633 1061516 NC_000014.9 scf320043576508 99.74 True relocation, inconsistency = -40285475 38768514 39019635 1061517 1313021 NC_000014.9 scf320043576508 99.73 True CONTIG scf320043576508 1313021 misassembled 84099642 84141735 42108 76 NC_000014.9 scf320043576509 99.61 True fake: scaffold gap size wrong estimation (local) 83644926 84099499 497186 42324 NC_000014.9 scf320043576509 99.88 True CONTIG scf320043576509 497186 correct 35177405 35271176 1 94003 NC_000014.9 scf320043576510 99.77 True fake: scaffold gap size wrong estimation (local) 35271791 35294761 94443 117398 NC_000014.9 scf320043576510 99.91 True fake: scaffold gap size wrong estimation (local) 35294988 35381813 117579 204538 NC_000014.9 scf320043576510 99.7 True indel: indel (> 5bp) 35381830 35465408 204579 288408 NC_000014.9 scf320043576510 99.56 True relocation, inconsistency = 68302723 103768132 103809505 288409 329807 NC_000014.9 scf320043576510 99.83 True fake: scaffold gap size wrong estimation (local) 103809757 103847123 329999 367408 NC_000014.9 scf320043576510 99.78 True fake: scaffold gap size wrong estimation (local) 103847463 103888945 367717 409114 NC_000014.9 scf320043576510 99.38 True relocation, inconsistency = -32242645 71646301 71649273 409115 412091 NC_000014.9 scf320043576510 99.8 True fake: scaffold gap size wrong estimation (local) 71649430 71807830 412196 570789 NC_000014.9 scf320043576510 99.81 True CONTIG scf320043576510 570838 misassembled 32779416 32851314 72444 281 NC_000014.9 scf320043576511 99.61 True fake: scaffold gap size wrong estimation (local) 32751499 32778841 100273 72893 NC_000014.9 scf320043576511 99.78 True fake: scaffold gap size wrong estimation (local) 32583690 32751073 268089 100581 NC_000014.9 scf320043576511 99.85 True CONTIG scf320043576511 268089 correct 53427211 53910726 1 483652 NC_000014.9 scf320043576512 99.79 True fake: scaffold gap size wrong estimation (local) 53910928 54055307 483756 628287 NC_000014.9 scf320043576512 99.73 True fake: scaffold gap size wrong estimation (local) 54055453 54072777 628392 645760 NC_000014.9 scf320043576512 99.53 True fake: scaffold gap size wrong estimation (local) 54073286 54203218 646251 775863 NC_000014.9 scf320043576512 99.46 True CONTIG scf320043576512 775941 correct 24714956 25172156 1 457347 NC_000014.9 scf320043576513 99.82 True CONTIG scf320043576513 457347 correct 101271467 101560510 1 288620 NC_000014.9 scf320043576514 99.49 True fake: scaffold gap size wrong estimation (local) 101561251 101572089 289372 300210 NC_000014.9 scf320043576514 100.0 True fake: scaffold gap size wrong estimation (local) 101572481 101661786 300564 389904 NC_000014.9 scf320043576514 99.84 True CONTIG scf320043576514 389904 correct 46215465 46266349 50851 9 NC_000014.9 scf320043576515 99.73 True CONTIG scf320043576515 50851 correct 99282259 99319628 1 37440 NC_000014.9 scf320043576516 99.68 True relocation, scaffold gap is present, inconsistency = -53220728 46098931 46104194 37471 42734 NC_000014.9 scf320043576516 99.87 True fake: scaffold gap size wrong estimation (local) 46105749 46163064 44342 101448 NC_000014.9 scf320043576516 99.14 True CONTIG scf320043576516 101448 misassembled 36520450 36774926 254984 1 NC_000014.9 scf320043576517 99.72 True fake: scaffold gap size wrong estimation (local) 36414767 36520352 360577 255124 NC_000014.9 scf320043576517 99.51 True CONTIG scf320043576517 360577 correct 59404175 59414600 10425 1 NC_000014.9 scf320043576518 99.75 True fake: scaffold gap size wrong estimation (local) 59237840 59403530 176726 11045 NC_000014.9 scf320043576518 99.86 True fake: scaffold gap size wrong estimation (local) 58743575 59237111 671126 177497 NC_000014.9 scf320043576518 99.6 True fake: scaffold gap size wrong estimation (local) 58684294 58743291 730450 671429 NC_000014.9 scf320043576518 99.81 True fake: scaffold gap size wrong estimation (local) 58592577 58684139 822260 730570 NC_000014.9 scf320043576518 99.84 True CONTIG scf320043576518 822260 correct 73344974 73386883 1 41607 NC_000014.9 scf320043576519 98.18 True fake: scaffold gap size wrong estimation (local) 73387038 73395449 41852 50315 NC_000014.9 scf320043576519 99.48 True fake: scaffold gap size wrong estimation (local) 73395959 73398445 50734 53219 NC_000014.9 scf320043576519 99.72 True fake: scaffold gap size wrong estimation (local) 73399120 73425901 53867 80799 NC_000014.9 scf320043576519 99.52 True fake: scaffold gap size wrong estimation (local) 73426475 73528116 81274 183270 NC_000014.9 scf320043576519 98.55 True relocation, inconsistency = 28029 73556146 73571092 183271 198252 NC_000014.9 scf320043576519 99.46 True fake: scaffold gap size wrong estimation (local) 73571005 73572030 199186 200211 NC_000014.9 scf320043576519 99.9 True fake: scaffold gap size wrong estimation (local) 73572230 73582333 200449 210385 NC_000014.9 scf320043576519 97.56 True CONTIG scf320043576519 210385 misassembled 79314206 79358912 12 44716 NC_000014.9 scf320043576520 99.95 True fake: scaffold gap size wrong estimation (local) 79359184 79500046 44879 185897 NC_000014.9 scf320043576520 99.74 True fake: scaffold gap size wrong estimation (local) 79500237 79751353 185967 437155 NC_000014.9 scf320043576520 99.79 True CONTIG scf320043576520 437155 correct 86695594 86878690 1 182797 NC_000014.9 scf320043576521 99.64 True fake: scaffold gap size wrong estimation (local) 86879287 87032938 183288 336875 NC_000014.9 scf320043576521 99.8 True fake: scaffold gap size wrong estimation (local) 87033124 87063505 336984 367342 NC_000014.9 scf320043576521 99.57 True fake: scaffold gap size wrong estimation (local) 87063770 87118884 367546 422668 NC_000014.9 scf320043576521 99.85 True fake: scaffold gap size wrong estimation (local) 87119034 87235855 422751 539408 NC_000014.9 scf320043576521 99.65 True relocation, inconsistency = -1502256 85733600 85829179 539409 635047 NC_000014.9 scf320043576521 99.72 True CONTIG scf320043576521 635048 misassembled 69417279 69419193 1931 17 NC_000014.9 scf320043576522 100.0 True indel: indel (<= 5bp) 69414051 69417277 5158 1932 NC_000014.9 scf320043576522 99.88 True fake: scaffold gap size wrong estimation (local) 69413185 69414050 6063 5198 NC_000014.9 scf320043576522 98.96 True fake: scaffold gap size wrong estimation (local) 69412276 69413184 7416 6508 NC_000014.9 scf320043576522 99.56 True fake: scaffold gap size wrong estimation (local) 69042170 69411243 377121 7609 NC_000014.9 scf320043576522 99.77 True CONTIG scf320043576522 377121 correct 22352964 22390276 1 37315 NC_000014.9 scf320043576523 99.5 True fake: scaffold gap size wrong estimation (local) 22390815 22504528 37864 152157 NC_000014.9 scf320043576523 99.31 True indel: indel (> 5bp) 22504690 22617245 152339 265098 NC_000014.9 scf320043576523 98.96 True CONTIG scf320043576523 265098 correct 59892520 59926874 34350 1 NC_000014.9 scf320043576524 99.91 True CONTIG scf320043576524 34350 correct 83114983 83202413 86782 1 NC_000014.9 scf320043576525 99.09 True fake: scaffold gap size wrong estimation (local) 82814457 83114384 386872 87191 NC_000014.9 scf320043576525 99.8 True fake: scaffold gap size wrong estimation (local) 82675823 82814298 525382 387120 NC_000014.9 scf320043576525 99.57 True indel: indel (> 5bp) 82353219 82675661 847845 525518 NC_000014.9 scf320043576525 99.75 True CONTIG scf320043576525 847845 correct 91557632 91634736 77381 4 NC_000014.9 scf320043576526 99.39 True fake: scaffold gap size wrong estimation (local) 91474013 91557183 161271 77838 NC_000014.9 scf320043576526 99.61 True fake: scaffold gap size wrong estimation (local) 91450652 91473920 184642 161346 NC_000014.9 scf320043576526 99.85 True CONTIG scf320043576526 184642 correct 41338589 41347228 1 8644 NC_000014.9 scf320043576527 99.7 True fake: scaffold gap size wrong estimation (local) 41347793 41420504 9059 82131 NC_000014.9 scf320043576527 99.37 True fake: scaffold gap size wrong estimation (local) 41420795 41492363 82380 153978 NC_000014.9 scf320043576527 99.85 True fake: scaffold gap size wrong estimation (local) 41492523 41516028 154168 177684 NC_000014.9 scf320043576527 99.91 True local misassembly 41521083 41526336 177817 183070 NC_000014.9 scf320043576527 99.52 True fake: scaffold gap size wrong estimation (local) 41526337 41530953 183137 187753 NC_000014.9 scf320043576527 99.96 True indel: indel (<= 5bp) 41530955 41539339 187754 196138 NC_000014.9 scf320043576527 99.99 True fake: scaffold gap size wrong estimation (local) 41539742 41583043 196425 239654 NC_000014.9 scf320043576527 99.79 True CONTIG scf320043576527 239747 correct 20238594 20279883 41475 19 NC_000014.9 scf320043576528 99.29 True CONTIG scf320043576528 41475 correct 31049475 31082723 40 33788 NC_000014.9 scf320043576529 98.39 True fake: scaffold gap size wrong estimation (local) 31082865 31246741 33894 197851 NC_000014.9 scf320043576529 99.7 True relocation, scaffold gap is present, inconsistency = 19625442 50872204 50894133 219853 197872 NC_000014.9 scf320043576529 99.47 True fake: scaffold gap size wrong estimation (local) 50597349 50872030 495013 220075 NC_000014.9 scf320043576529 99.72 True CONTIG scf320043576529 495013 misassembled 69417134 69534554 1 117539 NC_000014.9 scf320043576530 99.87 True fake: scaffold gap size wrong estimation (local) 69534894 69751173 117811 334354 NC_000014.9 scf320043576530 99.76 True fake: scaffold gap size wrong estimation (local) 69751399 70174426 334513 757368 NC_000014.9 scf320043576530 99.67 True fake: scaffold gap size wrong estimation (local) 70174781 70230055 757737 812980 NC_000014.9 scf320043576530 99.56 True relocation, scaffold gap is present, inconsistency = 226199 70456275 70475422 832287 813001 NC_000014.9 scf320043576530 97.17 True CONTIG scf320043576530 832287 misassembled 105916550 105917633 1 1084 NC_000014.9 scf320043576531 100.0 True fake: scaffold gap size wrong estimation (local) 105917449 105956352 2043 40587 NC_000014.9 scf320043576531 98.43 True CONTIG scf320043576531 40703 correct 47023199 47104593 81391 1 NC_000014.9 scf320043576532 99.81 True fake: scaffold gap size wrong estimation (local) 46858443 47022887 245972 81520 NC_000014.9 scf320043576532 99.72 True fake: not a misassembly (possible transposable element) 34553946 34555523 245973 247546 NC_000014.9 scf320043576532 99.71 True fake: not a misassembly (possible transposable element) 46513562 46858523 589671 247569 NC_000014.9 scf320043576532 98.79 True CONTIG scf320043576532 589671 correct 57169727 57338581 168543 3 NC_000014.9 scf320043576533 99.74 True fake: scaffold gap size wrong estimation (local) 57118079 57169530 220105 168759 NC_000014.9 scf320043576533 99.62 True CONTIG scf320043576533 220105 correct 60746991 60907455 160768 2 NC_000014.9 scf320043576534 99.74 True fake: scaffold gap size wrong estimation (local) 60723936 60746916 183798 160889 NC_000014.9 scf320043576534 99.6 True fake: scaffold gap size wrong estimation (local) 60605186 60723785 302906 183854 NC_000014.9 scf320043576534 99.6 True fake: scaffold gap size wrong estimation (local) 60590689 60604625 317310 303371 NC_000014.9 scf320043576534 99.79 True fake: scaffold gap size wrong estimation (local) 60434777 60590020 473314 317995 NC_000014.9 scf320043576534 99.68 True fake: scaffold gap size wrong estimation (local) 60425346 60434399 482679 473812 NC_000014.9 scf320043576534 97.93 True CONTIG scf320043576534 482679 correct 20450049 20505938 26 56102 NC_000014.9 scf320043576535 99.79 True fake: scaffold gap size wrong estimation (local) 20506731 20861880 56723 411923 NC_000014.9 scf320043576535 99.66 True CONTIG scf320043576535 411923 correct 76751046 76821691 1 70860 NC_000014.9 scf320043576536 99.62 True fake: scaffold gap size wrong estimation (local) 76822098 76866963 71334 116086 NC_000014.9 scf320043576536 99.26 True fake: scaffold gap size wrong estimation (local) 76867232 77027011 116365 274434 NC_000014.9 scf320043576536 98.48 True fake: scaffold gap size wrong estimation (local) 77027328 77624900 274695 871669 NC_000014.9 scf320043576536 99.38 True CONTIG scf320043576536 871669 correct 31276736 31400708 123959 1 NC_000014.9 scf320043576537 99.53 True indel: indel (> 5bp) 31265592 31276664 135119 124012 NC_000014.9 scf320043576537 99.69 True relocation, inconsistency = 42678328 73954993 73980165 135120 160338 NC_000014.9 scf320043576537 99.84 True fake: scaffold gap size wrong estimation (local) 73980454 74055243 160600 235112 NC_000014.9 scf320043576537 99.48 True local misassembly 74056996 74057565 235285 235837 NC_000014.9 scf320043576537 97.02 True local misassembly 74060415 74061046 236737 237353 NC_000014.9 scf320043576537 97.31 True relocation, inconsistency = 7757 74074529 74075174 243079 243701 NC_000014.9 scf320043576537 96.44 True relocation, inconsistency = 8760 74090714 74091234 250481 251001 NC_000014.9 scf320043576537 100.0 True relocation, inconsistency = 7345 74102182 74103138 254604 255559 NC_000014.9 scf320043576537 99.9 True local misassembly 74104754 74105456 255750 256439 NC_000014.9 scf320043576537 98.01 True local misassembly 74107083 74107723 257073 257693 NC_000014.9 scf320043576537 96.88 True local misassembly 74108093 74108723 257718 258347 NC_000014.9 scf320043576537 99.84 True relocation, inconsistency = 10516 74126071 74126777 265179 265883 NC_000014.9 scf320043576537 99.72 True local misassembly 74131829 74132461 268316 268930 NC_000014.9 scf320043576537 96.68 True fake: scaffold gap size wrong estimation (local) 74137499 74426061 271150 559502 NC_000014.9 scf320043576537 99.43 True fake: scaffold gap size wrong estimation (local) 74426243 74476132 559684 610453 NC_000014.9 scf320043576537 98.62 True fake: scaffold gap size wrong estimation (local) 74476033 74540787 610970 675769 NC_000014.9 scf320043576537 99.8 True fake: scaffold gap size wrong estimation (local) 74540948 74564095 676021 699167 NC_000014.9 scf320043576537 99.82 True fake: scaffold gap size wrong estimation (local) 74564381 74726826 699476 861980 NC_000014.9 scf320043576537 99.74 True fake: scaffold gap size wrong estimation (local) 74728297 74919216 862966 1054210 NC_000014.9 scf320043576537 99.79 True fake: scaffold gap size wrong estimation (local) 74919403 74994279 1054235 1129380 NC_000014.9 scf320043576537 99.53 True relocation, inconsistency = -20551097 54443183 54530407 1129381 1216684 NC_000014.9 scf320043576537 99.84 True fake: scaffold gap size wrong estimation (local) 54530595 54566137 1217032 1252615 NC_000014.9 scf320043576537 99.86 True fake: scaffold gap size wrong estimation (local) 54566457 54809941 1252833 1496623 NC_000014.9 scf320043576537 99.72 True CONTIG scf320043576537 1496623 misassembled 50298428 50600375 1 301938 NC_000014.9 scf320043576538 99.79 True CONTIG scf320043576538 301938 correct 62886131 62973450 87437 1 NC_000014.9 scf320043576539 99.84 True local misassembly 62877709 62884348 94176 87538 NC_000014.9 scf320043576539 99.95 True fake: scaffold gap size wrong estimation (local) 62747726 62877293 224210 94453 NC_000014.9 scf320043576539 99.74 True CONTIG scf320043576539 224210 correct 62211500 62284950 1 73441 NC_000014.9 scf320043576540 99.8 True fake: scaffold gap size wrong estimation (local) 62286045 62286923 74412 75290 NC_000014.9 scf320043576540 98.98 True fake: scaffold gap size wrong estimation (local) 62287795 62327694 76185 116066 NC_000014.9 scf320043576540 99.72 True CONTIG scf320043576540 116066 correct 106595494 106642189 46699 1 NC_000014.9 scf320043576541 99.86 True CONTIG scf320043576541 46699 correct 75925540 76100644 175158 1 NC_000014.9 scf320043576542 99.77 True fake: scaffold gap size wrong estimation (local) 75924093 75924922 176600 175771 NC_000014.9 scf320043576542 99.4 True fake: scaffold gap size wrong estimation (local) 75475034 75923987 626288 176693 NC_000014.9 scf320043576542 99.54 True fake: scaffold gap size wrong estimation (local) 75428331 75474870 673010 626467 NC_000014.9 scf320043576542 99.91 True fake: scaffold gap size wrong estimation (local) 75029624 75428033 1072750 673293 NC_000014.9 scf320043576542 99.72 True fake: scaffold gap size wrong estimation (local) 74995619 75029234 1106745 1073095 NC_000014.9 scf320043576542 99.74 True CONTIG scf320043576542 1106757 correct 106764654 106881354 116580 1 NC_000014.9 scf320043576543 99.5 True relocation, scaffold gap is present, inconsistency = 285153 106419139 106479480 177246 116601 NC_000014.9 scf320043576543 99.21 True CONTIG scf320043576543 177266 misassembled 19787284 19962916 176078 11 NC_000014.9 scf320043576544 99.16 True CONTIG scf320043576544 176078 correct 59952251 60249560 1 298165 NC_000014.9 scf320043576545 99.76 True fake: scaffold gap size wrong estimation (local) 60249918 60340197 298510 388666 NC_000014.9 scf320043576545 99.81 True relocation, inconsistency = 36274008 96614206 96767608 541584 388667 NC_000014.9 scf320043576545 99.35 True fake: scaffold gap size wrong estimation (local) 96453805 96613538 702079 542173 NC_000014.9 scf320043576545 99.83 True CONTIG scf320043576545 702079 misassembled 105186822 105230143 42685 1 NC_000014.9 scf320043576546 97.54 True fake: scaffold gap size wrong estimation (local) 105181379 105186291 47836 42916 NC_000014.9 scf320043576546 99.7 True fake: scaffold gap size wrong estimation (local) 105168930 105181088 60233 48106 NC_000014.9 scf320043576546 99.52 True fake: scaffold gap size wrong estimation (local) 105167612 105168198 61560 60974 NC_000014.9 scf320043576546 96.59 True local misassembly 105162921 105167521 66161 61561 NC_000014.9 scf320043576546 99.8 True fake: scaffold gap size wrong estimation (local) 105161799 105162547 67626 66878 NC_000014.9 scf320043576546 99.87 True fake: scaffold gap size wrong estimation (local) 105160097 105161798 69494 67793 NC_000014.9 scf320043576546 99.94 True fake: scaffold gap size wrong estimation (local) 104978507 105159715 248873 69914 NC_000014.9 scf320043576546 97.46 True fake: scaffold gap size wrong estimation (local) 104955977 104978311 271418 249084 NC_000014.9 scf320043576546 99.94 True indel: indel (<= 5bp) 104954917 104955975 272477 271419 NC_000014.9 scf320043576546 99.91 True indel: indel (> 5bp) 104951801 104954899 275576 272478 NC_000014.9 scf320043576546 99.13 True relocation, inconsistency = 8417 104934037 104942738 284923 276222 NC_000014.9 scf320043576546 99.79 True fake: scaffold gap size wrong estimation (local) 104865370 104933262 352947 286235 NC_000014.9 scf320043576546 97.29 True fake: scaffold gap size wrong estimation (local) 104863802 104865071 354327 353058 NC_000014.9 scf320043576546 99.76 True indel: indel (<= 5bp) 104862098 104863798 356028 354328 NC_000014.9 scf320043576546 99.88 True local misassembly 104859301 104860180 357747 356868 NC_000014.9 scf320043576546 99.2 True local misassembly 104857086 104858973 359733 357846 NC_000014.9 scf320043576546 99.68 True indel: indel (<= 5bp) 104855127 104856587 361690 360230 NC_000014.9 scf320043576546 98.36 True local misassembly 104852695 104854556 363946 362085 NC_000014.9 scf320043576546 99.79 True indel: indel (<= 5bp) 104851611 104852694 365031 363948 NC_000014.9 scf320043576546 99.82 True indel: indel (<= 5bp) 104851082 104851610 365563 365035 NC_000014.9 scf320043576546 100.0 True indel: indel (<= 5bp) 104849187 104851080 367457 365564 NC_000014.9 scf320043576546 99.68 True indel: indel (<= 5bp) 104848490 104849184 368152 367458 NC_000014.9 scf320043576546 99.57 True indel: indel (<= 5bp) 104843927 104848488 372714 368153 NC_000014.9 scf320043576546 99.74 True indel: indel (<= 5bp) 104842039 104843921 374597 372715 NC_000014.9 scf320043576546 99.68 True indel: indel (<= 5bp) 104837272 104841912 379369 374729 NC_000014.9 scf320043576546 99.83 True fake: scaffold gap size wrong estimation (local) 104835944 104836845 380735 379834 NC_000014.9 scf320043576546 99.89 True indel: indel (<= 5bp) 104833053 104835943 383627 380737 NC_000014.9 scf320043576546 99.9 True indel: indel (<= 5bp) 104831413 104832975 385266 383704 NC_000014.9 scf320043576546 99.62 True indel: indel (<= 5bp) 104830337 104831412 386345 385270 NC_000014.9 scf320043576546 97.03 True indel: indel (<= 5bp) 104828417 104830336 388269 386350 NC_000014.9 scf320043576546 99.74 True indel: indel (<= 5bp) 104826655 104828416 390033 388272 NC_000014.9 scf320043576546 95.46 True indel: indel (> 5bp) 104824085 104826619 392568 390034 NC_000014.9 scf320043576546 99.64 True indel: indel (<= 5bp) 104821057 104823718 395601 392940 NC_000014.9 scf320043576546 99.92 True indel: indel (> 5bp) 104814950 104820654 401720 396016 NC_000014.9 scf320043576546 99.91 True fake: scaffold gap size wrong estimation (local) 104813241 104814949 403470 401762 NC_000014.9 scf320043576546 99.82 True indel: indel (> 5bp) 104812446 104813240 404282 403488 NC_000014.9 scf320043576546 99.62 True fake: scaffold gap size wrong estimation (local) 104809706 104812445 407056 404317 NC_000014.9 scf320043576546 99.78 True indel: indel (> 5bp) 104808988 104809563 407781 407206 NC_000014.9 scf320043576546 99.65 True indel: indel (> 5bp) 104808377 104808981 408386 407782 NC_000014.9 scf320043576546 99.67 True local misassembly 104806615 104807616 409388 408387 NC_000014.9 scf320043576546 100.0 True fake: scaffold gap size wrong estimation (local) 104804147 104806614 415268 412801 NC_000014.9 scf320043576546 99.84 True indel: indel (<= 5bp) 104803072 104804146 416345 415271 NC_000014.9 scf320043576546 99.91 True fake: scaffold gap size wrong estimation (local) 104800819 104803071 418631 416379 NC_000014.9 scf320043576546 99.91 True fake: scaffold gap size wrong estimation (local) 104795822 104800559 423588 418850 NC_000014.9 scf320043576546 99.85 True fake: scaffold gap size wrong estimation (local) 104707742 104795514 510962 423949 NC_000014.9 scf320043576546 98.87 True fake: scaffold gap size wrong estimation (local) 104661762 104707560 556936 511126 NC_000014.9 scf320043576546 99.51 True CONTIG scf320043576546 556940 misassembled 48168414 48187307 18891 1 NC_000014.9 scf320043576547 99.86 True fake: scaffold gap size wrong estimation (local) 47941769 48167905 245670 19268 NC_000014.9 scf320043576547 99.79 True fake: scaffold gap size wrong estimation (local) 47906796 47941316 280630 246102 NC_000014.9 scf320043576547 99.72 True CONTIG scf320043576547 280630 correct 42182019 42255979 74034 68 NC_000014.9 scf320043576548 99.79 True fake: scaffold gap size wrong estimation (local) 42153448 42181890 102571 74148 NC_000014.9 scf320043576548 99.8 True CONTIG scf320043576548 102571 correct 20108997 20212349 1 103596 NC_000014.9 scf320043576549 99.64 True fake: scaffold gap size wrong estimation (local) 20213183 20217271 104299 108384 NC_000014.9 scf320043576549 99.73 True fake: scaffold gap size wrong estimation (local) 20217717 20232639 108738 123643 NC_000014.9 scf320043576549 99.56 True CONTIG scf320043576549 123643 correct 50893622 50945609 18 52001 NC_000014.9 scf320043576550 99.94 True local misassembly 50945941 51151944 52002 258550 NC_000014.9 scf320043576550 99.71 True fake: scaffold gap size wrong estimation (local) 51152344 51178090 259232 285074 NC_000014.9 scf320043576550 99.43 True fake: scaffold gap size wrong estimation (local) 51178195 51414497 285230 521763 NC_000014.9 scf320043576550 99.76 True relocation, inconsistency = 42966015 94380513 94608145 749383 521764 NC_000014.9 scf320043576550 99.77 True fake: scaffold gap size wrong estimation (local) 94363767 94380294 766160 749638 NC_000014.9 scf320043576550 99.76 True CONTIG scf320043576550 768463 misassembled 23470280 23585139 114918 1 NC_000014.9 scf320043576551 99.72 True fake: scaffold gap size wrong estimation (local) 23416229 23469727 168226 115038 NC_000014.9 scf320043576551 98.98 True fake: scaffold gap size wrong estimation (local) 23321661 23416102 262908 168310 NC_000014.9 scf320043576551 99.83 True fake: scaffold gap size wrong estimation (local) 23294429 23321483 290372 263149 NC_000014.9 scf320043576551 99.44 True fake: scaffold gap size wrong estimation (local) 23192237 23294120 392601 290594 NC_000014.9 scf320043576551 99.71 True CONTIG scf320043576551 392605 correct 92095500 92226657 131293 1 NC_000014.9 scf320043576552 99.74 True fake: scaffold gap size wrong estimation (local) 92042960 92095050 183929 131707 NC_000014.9 scf320043576552 99.75 True fake: scaffold gap size wrong estimation (local) 91645894 92042504 581664 184295 NC_000014.9 scf320043576552 99.68 True CONTIG scf320043576552 581664 correct 66836918 66893999 1 57077 NC_000014.9 scf320043576553 99.98 True indel: indel (<= 5bp) 66894100 67341282 57175 504764 NC_000014.9 scf320043576553 99.8 True indel: indel (> 5bp) 67341525 67439595 504934 602905 NC_000014.9 scf320043576553 99.7 True fake: scaffold gap size wrong estimation (local) 67440028 67868698 603399 1032226 NC_000014.9 scf320043576553 99.67 True CONTIG scf320043576553 1032226 correct 27046494 27064048 1 17571 NC_000014.9 scf320043576554 99.87 True fake: scaffold gap size wrong estimation (local) 27064159 27116576 17698 70127 NC_000014.9 scf320043576554 99.84 True fake: scaffold gap size wrong estimation (local) 27117199 27339664 70615 293057 NC_000014.9 scf320043576554 99.79 True CONTIG scf320043576554 293057 correct 102063677 102105054 1 41468 NC_000014.9 scf320043576555 99.68 True fake: scaffold gap size wrong estimation (local) 102105231 102152519 41633 88825 NC_000014.9 scf320043576555 99.37 True relocation, scaffold gap is present, inconsistency = 79864157 22225471 22241051 104414 88848 NC_000014.9 scf320043576555 99.85 True relocation, inconsistency = 79911369 102152421 102244537 104415 196426 NC_000014.9 scf320043576555 99.56 True CONTIG scf320043576555 196426 misassembled 66204277 66278072 1 73792 NC_000014.9 scf320043576556 99.99 True relocation, inconsistency = 36791486 29328930 29412790 157607 73793 NC_000014.9 scf320043576556 99.85 True fake: scaffold gap size wrong estimation (local) 29004584 29328498 481453 157882 NC_000014.9 scf320043576556 99.72 True CONTIG scf320043576556 481453 misassembled 48193118 48263903 70779 1 NC_000014.9 scf320043576557 99.82 True CONTIG scf320043576557 70802 correct 38757955 38768535 10609 20 NC_000014.9 scf320043576558 99.75 True fake: scaffold gap size wrong estimation (local) 38673087 38757658 95329 10756 NC_000014.9 scf320043576558 99.88 True fake: scaffold gap size wrong estimation (local) 38639844 38672884 128639 95566 NC_000014.9 scf320043576558 99.85 True relocation, scaffold gap is present, inconsistency = 53555650 92228602 92230043 128707 130147 NC_000014.9 scf320043576558 98.41 True indel: indel (<= 5bp) 92230122 92323186 130227 223364 NC_000014.9 scf320043576558 99.65 True fake: scaffold gap size wrong estimation (local) 92323351 92474679 223447 374610 NC_000014.9 scf320043576558 99.62 True indel: indel (> 5bp) 92474753 92744124 374636 643440 NC_000014.9 scf320043576558 99.34 True fake: scaffold gap size wrong estimation (local) 92744526 92766894 643807 666253 NC_000014.9 scf320043576558 99.76 True CONTIG scf320043576558 666253 misassembled 58038403 58126819 27 88497 NC_000014.9 scf320043576559 99.88 True fake: scaffold gap size wrong estimation (local) 58127506 58202594 89049 164514 NC_000014.9 scf320043576559 99.84 True fake: scaffold gap size wrong estimation (local) 58203303 58222781 165049 184792 NC_000014.9 scf320043576559 99.66 True fake: scaffold gap size wrong estimation (local) 58223197 58417518 185049 379612 NC_000014.9 scf320043576559 99.68 True local misassembly 58420653 58582531 379712 541395 NC_000014.9 scf320043576559 99.66 True CONTIG scf320043576559 541502 correct 29958007 30331953 1 373886 NC_000014.9 scf320043576560 99.81 True relocation, inconsistency = 68939364 99271318 99282188 384755 373887 NC_000014.9 scf320043576560 99.91 True fake: scaffold gap size wrong estimation (local) 99250305 99270773 405809 385296 NC_000014.9 scf320043576560 99.76 True indel: stretch of mismatches 98836554 99250184 812899 405930 NC_000014.9 scf320043576560 98.13 True fake: scaffold gap size wrong estimation (local) 98454175 98835095 1195481 814296 NC_000014.9 scf320043576560 99.8 True fake: scaffold gap size wrong estimation (local) 98447085 98449341 1198080 1195824 NC_000014.9 scf320043576560 99.65 True local misassembly 98449475 98452505 1201113 1198081 NC_000014.9 scf320043576560 99.67 True local misassembly 98452506 98454275 1202903 1201134 NC_000014.9 scf320043576560 99.71 True local misassembly 98330649 98447084 1319166 1202904 NC_000014.9 scf320043576560 99.64 True fake: scaffold gap size wrong estimation (local) 97788429 98330502 1861539 1319354 NC_000014.9 scf320043576560 99.75 True fake: scaffold gap size wrong estimation (local) 97782039 97787837 1868452 1862654 NC_000014.9 scf320043576560 100.0 True fake: scaffold gap size wrong estimation (local) 97689474 97781286 1960979 1869145 NC_000014.9 scf320043576560 99.79 True fake: scaffold gap size wrong estimation (local) 97687184 97689308 1963220 1961096 NC_000014.9 scf320043576560 99.58 True fake: scaffold gap size wrong estimation (local) 97467305 97686972 2183040 1963362 NC_000014.9 scf320043576560 99.89 True fake: scaffold gap size wrong estimation (local) 97449365 97467139 2200914 2183151 NC_000014.9 scf320043576560 99.83 True fake: scaffold gap size wrong estimation (local) 97389642 97449219 2260562 2201021 NC_000014.9 scf320043576560 99.77 True CONTIG scf320043576560 2260562 misassembled 95975539 96430060 449215 45 NC_000014.9 scf320043576561 98.6 True indel: indel (<= 5bp) 95582604 95975384 841405 449366 NC_000014.9 scf320043576561 99.48 True local misassembly 95559811 95582571 864737 841930 NC_000014.9 scf320043576561 99.44 True fake: scaffold gap size wrong estimation (local) 95320131 95559524 1104267 864888 NC_000014.9 scf320043576561 99.0 True fake: scaffold gap size wrong estimation (local) 95159706 95319882 1264944 1104470 NC_000014.9 scf320043576561 99.72 True CONTIG scf320043576561 1264944 correct 31246486 31250644 1 4037 NC_000014.9 scf320043576562 96.38 True fake: scaffold gap size wrong estimation (local) 31250601 31265596 4326 19196 NC_000014.9 scf320043576562 98.05 True CONTIG scf320043576562 19196 correct 46164636 46180111 1 15480 NC_000014.9 scf320043576563 99.63 True relocation, scaffold gap is present, inconsistency = 19119224 26864415 27044635 196748 16257 NC_000014.9 scf320043576563 99.54 True relocation, inconsistency = -12720187 39583906 39584601 197444 196749 NC_000014.9 scf320043576563 99.87 True CONTIG scf320043576563 197444 misassembled 53059664 53266770 207150 1 NC_000014.9 scf320043576564 99.67 True fake: scaffold gap size wrong estimation (local) 52951319 53059138 315391 207524 NC_000014.9 scf320043576564 99.85 True fake: scaffold gap size wrong estimation (local) 52732267 52951045 534866 315667 NC_000014.9 scf320043576564 99.57 True CONTIG scf320043576564 534866 correct 44209403 44230042 20467 1 NC_000014.9 scf320043576565 99.11 True fake: scaffold gap size wrong estimation (local) 44032411 44208842 197287 20994 NC_000014.9 scf320043576565 99.71 True CONTIG scf320043576565 197287 correct 66278658 66460498 30 181964 NC_000014.9 scf320043576566 99.93 True fake: scaffold gap size wrong estimation (local) 66460859 66583581 182228 304436 NC_000014.9 scf320043576566 99.55 True CONTIG scf320043576566 304450 correct 54875061 54880365 137 5441 NC_000014.9 scf320043576567 99.77 True fake: scaffold gap size wrong estimation (local) 54880502 54892599 5535 17511 NC_000014.9 scf320043576567 98.65 True fake: scaffold gap size wrong estimation (local) 54892838 54915500 17700 40534 NC_000014.9 scf320043576567 99.19 True fake: scaffold gap size wrong estimation (local) 54915616 54950894 40739 76030 NC_000014.9 scf320043576567 99.68 True indel: indel (<= 5bp) 54950966 55024770 76103 150028 NC_000014.9 scf320043576567 99.71 True fake: scaffold gap size wrong estimation (local) 55024854 55210672 150127 335902 NC_000014.9 scf320043576567 99.52 True fake: scaffold gap size wrong estimation (local) 55210863 55331659 336006 456842 NC_000014.9 scf320043576567 99.53 True fake: scaffold gap size wrong estimation (local) 55331824 55364249 457048 489520 NC_000014.9 scf320043576567 99.77 True fake: scaffold gap size wrong estimation (local) 55364612 55385358 489728 510550 NC_000014.9 scf320043576567 99.61 True CONTIG scf320043576567 510550 correct 99321158 99510260 2 188513 NC_000014.9 scf320043576568 99.3 True fake: scaffold gap size wrong estimation (local) 99510572 99603318 188837 281543 NC_000014.9 scf320043576568 99.67 True fake: scaffold gap size wrong estimation (local) 99603434 99603948 281717 282231 NC_000014.9 scf320043576568 100.0 True fake: scaffold gap size wrong estimation (local) 99603935 99673642 282252 351638 NC_000014.9 scf320043576568 99.21 True fake: scaffold gap size wrong estimation (local) 99673823 99675122 351874 353173 NC_000014.9 scf320043576568 99.92 True fake: scaffold gap size wrong estimation (local) 99675266 99684387 353270 362407 NC_000014.9 scf320043576568 99.74 True fake: scaffold gap size wrong estimation (local) 99685099 99793080 363093 471007 NC_000014.9 scf320043576568 99.73 True fake: scaffold gap size wrong estimation (local) 99793761 99971759 471579 649352 NC_000014.9 scf320043576568 99.45 True fake: scaffold gap size wrong estimation (local) 99972116 99978216 649744 655832 NC_000014.9 scf320043576568 99.75 True fake: scaffold gap size wrong estimation (local) 99978322 100166010 655987 843945 NC_000014.9 scf320043576568 99.81 True fake: scaffold gap size wrong estimation (local) 100166304 100180860 844320 858888 NC_000014.9 scf320043576568 99.86 True fake: scaffold gap size wrong estimation (local) 100181277 100239005 859644 917399 NC_000014.9 scf320043576568 99.75 True fake: scaffold gap size wrong estimation (local) 100239435 100240079 917551 918195 NC_000014.9 scf320043576568 100.0 True fake: scaffold gap size wrong estimation (local) 100240397 100344448 918884 1023135 NC_000014.9 scf320043576568 99.73 True fake: scaffold gap size wrong estimation (local) 100345173 100587255 1023574 1265913 NC_000014.9 scf320043576568 99.34 True fake: scaffold gap size wrong estimation (local) 100587495 100685617 1266175 1364327 NC_000014.9 scf320043576568 99.74 True fake: scaffold gap size wrong estimation (local) 100686734 100870249 1365955 1549446 NC_000014.9 scf320043576568 99.77 True local misassembly 100871292 100873474 1549447 1551631 NC_000014.9 scf320043576568 99.85 True fake: scaffold gap size wrong estimation (local) 100871355 100873411 1551674 1553731 NC_000014.9 scf320043576568 99.85 True local misassembly 100873456 101130346 1554061 1810710 NC_000014.9 scf320043576568 99.44 True local misassembly 101130561 101211218 1810757 1891394 NC_000014.9 scf320043576568 99.6 True fake: scaffold gap size wrong estimation (local) 101211268 101229923 1891462 1910121 NC_000014.9 scf320043576568 99.78 True fake: scaffold gap size wrong estimation (local) 101230115 101266967 1910229 1946165 NC_000014.9 scf320043576568 97.35 True CONTIG scf320043576568 1946165 correct 19724900 19787255 62163 28 NC_000014.9 scf320043576569 99.28 True CONTIG scf320043576569 62163 correct CONTIG scf320043576570 282 unaligned 24495058 24528625 14 33623 NC_000014.9 scf320043576571 99.42 True CONTIG scf320043576571 33630 correct 24527868 24528625 1 754 NC_000014.9 scf320043576573 96.17 True CONTIG scf320043576573 761 correct 40423766 40567492 7 143645 NC_000014.9 scf320043576574 99.12 True fake: scaffold gap size wrong estimation (local) 40568186 40608489 144267 184598 NC_000014.9 scf320043576574 99.67 True CONTIG scf320043576574 184598 correct 39645518 39648160 2643 1 NC_000014.9 scf320043576575 99.96 True local misassembly 39636139 39644797 11302 2644 NC_000014.9 scf320043576575 99.87 True CONTIG scf320043576575 11325 correct 39636139 39637444 1306 1 NC_000014.9 scf320043576576 98.77 True CONTIG scf320043576576 1329 correct 21177883 21182423 3 4543 NC_000014.9 scf320043576577 99.8 True fake: scaffold gap size wrong estimation (local) 21182181 21279615 5045 102072 NC_000014.9 scf320043576577 99.13 True CONTIG scf320043576577 102072 correct 21278411 21279615 2 1206 NC_000014.9 scf320043576578 100.0 True CONTIG scf320043576578 1206 correct 62557905 62559831 1 1923 NC_000014.9 scf320043576579 99.69 True CONTIG scf320043576579 1930 correct 62559817 62638230 1 78412 NC_000014.9 scf320043576580 99.78 True CONTIG scf320043576580 78412 correct CONTIG scf320043576581 475 unaligned 39356872 39484471 1 127614 NC_000014.9 scf320043576582 99.82 True CONTIG scf320043576582 127614 correct 42961024 42968302 7276 1 NC_000014.9 scf320043576583 99.92 True fake: scaffold gap size wrong estimation (local) 42958234 42960796 9941 7379 NC_000014.9 scf320043576583 99.77 True CONTIG scf320043576583 10418 correct CONTIG scf320043576584 419 unaligned 56635366 56642572 7220 21 NC_000014.9 scf320043576585 99.56 True CONTIG scf320043576585 7220 correct 102535659 102592793 1 57446 NC_000014.9 scf320043576586 99.49 True fake: scaffold gap size wrong estimation (local) 102593134 102621390 57702 86003 NC_000014.9 scf320043576586 99.55 True relocation, scaffold gap is present, inconsistency = -50848960 51772451 51794750 86024 108315 NC_000014.9 scf320043576586 99.74 True relocation, scaffold gap is present, inconsistency = 50826290 102621393 102650047 108668 137180 NC_000014.9 scf320043576586 99.17 True fake: scaffold gap size wrong estimation (local) 102650099 102676516 137638 164085 NC_000014.9 scf320043576586 99.78 True fake: scaffold gap size wrong estimation (local) 102677314 102777195 164853 265406 NC_000014.9 scf320043576586 99.2 True fake: scaffold gap size wrong estimation (local) 102777867 102820577 266054 308769 NC_000014.9 scf320043576586 99.54 True fake: scaffold gap size wrong estimation (local) 102820636 102930089 308825 417999 NC_000014.9 scf320043576586 99.51 True fake: scaffold gap size wrong estimation (local) 102930278 102948206 418188 436146 NC_000014.9 scf320043576586 99.78 True fake: scaffold gap size wrong estimation (local) 102948637 103050081 436536 536072 NC_000014.9 scf320043576586 97.73 True CONTIG scf320043576586 536072 misassembled CONTIG scf320043576587 317 unaligned 18430695 18462783 53 31754 NC_000014.9 scf320043576588 98.68 True fake: scaffold gap size wrong estimation (local) 18463772 18527048 33253 95261 NC_000014.9 scf320043576588 95.55 True fake: scaffold gap size wrong estimation (local) 18527168 18572223 95415 139385 NC_000014.9 scf320043576588 97.24 True CONTIG scf320043576588 139385 correct