S1	E1	S2	E2	Reference	Contig	IDY	Ambiguous	Best_group
105555916	105557409	1494	1	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
105553361	105555168	4192	2385	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
105526806	105553165	30724	4369	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
105523065	105526530	34848	31142	NC_000014.9	scaffold_0	96.81		True
fake: scaffold gap size wrong estimation (local)
105521446	105522865	36609	35198	NC_000014.9	scaffold_0	99.44		True
fake: scaffold gap size wrong estimation (local)
105510814	105520772	47689	37450	NC_000014.9	scaffold_0	96.94		True
fake: scaffold gap size wrong estimation (local)
105502776	105510216	55752	48308	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
105477776	105502051	80770	56553	NC_000014.9	scaffold_0	99.65		True
fake: scaffold gap size wrong estimation (local)
105474798	105477661	85298	82435	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
105460179	105474620	99981	85460	NC_000014.9	scaffold_0	99.12		True
fake: scaffold gap size wrong estimation (local)
105429640	105459077	130191	100495	NC_000014.9	scaffold_0	99.34		True
indel: indel (> 5bp)
105420272	105429401	139638	130507	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
105362354	105419809	197571	140083	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
105356906	105362185	203057	197782	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
105314933	105356635	244720	203314	NC_000014.9	scaffold_0	98.63		True
fake: scaffold gap size wrong estimation (local)
105289008	105314595	270648	245062	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
105281249	105288650	278359	270958	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
105277503	105281067	282124	278560	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
105272188	105275970	287300	283413	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
105248684	105271932	311197	287927	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
105240884	105248576	319006	311310	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
105216034	105229108	344548	331471	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
105206893	105215660	353647	344905	NC_000014.9	scaffold_0	99.67		True
fake: scaffold gap size wrong estimation (local)
105192718	105206326	367801	354193	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
105186580	105192322	373946	368203	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
105168921	105186222	391495	374218	NC_000014.9	scaffold_0	99.66		True
fake: scaffold gap size wrong estimation (local)
105162576	105168193	397846	392228	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
105160086	105161241	400452	399297	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
105156202	105159737	404307	400772	NC_000014.9	scaffold_0	99.83		True
indel: indel (<= 5bp)
105151214	105156201	409296	404309	NC_000014.9	scaffold_0	99.9		True
indel: indel (> 5bp)
105150086	105151213	410433	409306	NC_000014.9	scaffold_0	99.82		True
local misassembly
105142585	105149930	417779	410434	NC_000014.9	scaffold_0	99.84		True
indel: indel (<= 5bp)
105136232	105142584	424133	417781	NC_000014.9	scaffold_0	99.78		True
indel: indel (<= 5bp)
105135329	105136230	425035	424134	NC_000014.9	scaffold_0	99.56		True
indel: indel (> 5bp)
105133235	105135321	427122	425036	NC_000014.9	scaffold_0	99.76		True
indel: indel (<= 5bp)
105131073	105133234	429286	427125	NC_000014.9	scaffold_0	99.95		True
local misassembly
105125613	105130079	434743	430277	NC_000014.9	scaffold_0	99.84		True
indel: indel (<= 5bp)
105117589	105125612	442771	434748	NC_000014.9	scaffold_0	99.88		True
indel: indel (<= 5bp)
105116805	105117588	443556	442773	NC_000014.9	scaffold_0	99.87		True
indel: indel (> 5bp)
105113870	105116376	446499	443993	NC_000014.9	scaffold_0	97.25		True
local misassembly
105109800	105110320	447599	447079	NC_000014.9	scaffold_0	99.81		True
indel: indel (> 5bp)
105107872	105109765	449517	447624	NC_000014.9	scaffold_0	99.58		True
indel: indel (<= 5bp)
105104681	105107869	452706	449518	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
105079978	105104277	477794	453097	NC_000014.9	scaffold_0	99.62		True
fake: scaffold gap size wrong estimation (local)
105068702	105078605	488947	479157	NC_000014.9	scaffold_0	98.38		True
fake: scaffold gap size wrong estimation (local)
105045450	105068490	512257	489222	NC_000014.9	scaffold_0	99.84		True
indel: indel (> 5bp)
105032250	105045339	525526	512387	NC_000014.9	scaffold_0	99.11		True
fake: scaffold gap size wrong estimation (local)
104963830	105032013	593835	525796	NC_000014.9	scaffold_0	99.57		True
fake: scaffold gap size wrong estimation (local)
104953037	104963680	604542	593918	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
104949330	104949916	607109	606523	NC_000014.9	scaffold_0	99.32		True
local misassembly
104947820	104948834	608124	607110	NC_000014.9	scaffold_0	99.41		True
fake: scaffold gap size wrong estimation (local)
104946011	104946555	609943	609399	NC_000014.9	scaffold_0	99.27		True
local misassembly
104944850	104945515	610609	609944	NC_000014.9	scaffold_0	99.7		True
fake: scaffold gap size wrong estimation (local)
104943193	104944849	612629	610973	NC_000014.9	scaffold_0	99.58		True
fake: scaffold gap size wrong estimation (local)
104933989	104942556	621816	613249	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
104906882	104933637	649556	622803	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
104890903	104905289	665408	651025	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
104890097	104890710	666290	665668	NC_000014.9	scaffold_0	98.39		True
indel: indel (> 5bp)
104884945	104889940	671374	666379	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
104872338	104884734	683912	671468	NC_000014.9	scaffold_0	99.19		True
indel: indel (> 5bp)
104865309	104872287	690892	683913	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
104862336	104865071	693854	691122	NC_000014.9	scaffold_0	99.71		True
fake: scaffold gap size wrong estimation (local)
104855432	104859912	700368	695903	NC_000014.9	scaffold_0	99.35		True
fake: scaffold gap size wrong estimation (local)
104834344	104854365	721594	701493	NC_000014.9	scaffold_0	99.71		True
fake: scaffold gap size wrong estimation (local)
104828801	104833473	727209	722523	NC_000014.9	scaffold_0	99.55		True
fake: scaffold gap size wrong estimation (local)
104815151	104828433	741049	727808	NC_000014.9	scaffold_0	99.35		True
fake: scaffold gap size wrong estimation (local)
104811822	104815018	744693	741192	NC_000014.9	scaffold_0	96.84		True
fake: scaffold gap size wrong estimation (local)
104808324	104811528	748271	745068	NC_000014.9	scaffold_0	99.31		True
fake: scaffold gap size wrong estimation (local)
104800839	104806617	755832	750051	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
104795822	104800537	760867	756151	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
104729835	104795504	826982	761178	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
104721371	104729585	835464	827268	NC_000014.9	scaffold_0	99.7		True
fake: scaffold gap size wrong estimation (local)
104672966	104720673	883867	836159	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
104665132	104671908	891639	884858	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
104662643	104664138	894187	892692	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
104653615	104662036	903288	894845	NC_000014.9	scaffold_0	99.56		True
fake: scaffold gap size wrong estimation (local)
104641842	104653317	915015	903550	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
104637358	104641527	919507	915338	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
104619121	104637237	937717	919742	NC_000014.9	scaffold_0	99.19		True
fake: scaffold gap size wrong estimation (local)
104549796	104618656	1006953	938151	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
104546892	104548543	1009821	1008169	NC_000014.9	scaffold_0	99.21		True
fake: scaffold gap size wrong estimation (local)
104539985	104546520	1016649	1010114	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
104534439	104539285	1022165	1017320	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
104532017	104533176	1024785	1023626	NC_000014.9	scaffold_0	100.0		True
local misassembly
104533164	104534415	1026037	1024787	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
104526290	104531882	1032838	1027232	NC_000014.9	scaffold_0	99.39		True
fake: scaffold gap size wrong estimation (local)
104498926	104526024	1060306	1033213	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
104461657	104498813	1104459	1067419	NC_000014.9	scaffold_0	99.51		True
fake: scaffold gap size wrong estimation (local)
104444262	104461542	1122259	1104952	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
104431211	104444294	1136947	1123864	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
104415329	104429958	1152777	1138141	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
104375381	104412548	1193229	1156065	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
104355009	104375147	1213532	1193394	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
104325574	104354800	1242916	1213762	NC_000014.9	scaffold_0	99.61		True
fake: scaffold gap size wrong estimation (local)
104308882	104324854	1259105	1243488	NC_000014.9	scaffold_0	97.37		True
fake: scaffold gap size wrong estimation (local)
104300994	104308573	1267060	1259481	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
104299379	104300903	1268767	1267243	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
104289553	104298971	1278648	1269235	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
104271056	104288980	1297149	1279231	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
104252057	104270272	1315993	1297983	NC_000014.9	scaffold_0	98.79		True
fake: scaffold gap size wrong estimation (local)
104242773	104250833	1325543	1317480	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
104238921	104241119	1329345	1327147	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
104225820	104238688	1342932	1329458	NC_000014.9	scaffold_0	99.27		True
fake: scaffold gap size wrong estimation (local)
104217544	104225214	1351062	1343393	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
104215497	104217175	1353265	1351581	NC_000014.9	scaffold_0	98.81		True
fake: scaffold gap size wrong estimation (local)
104209410	104214979	1360289	1354737	NC_000014.9	scaffold_0	99.59		True
fake: scaffold gap size wrong estimation (local)
104204711	104208147	1365049	1361623	NC_000014.9	scaffold_0	99.51		True
fake: scaffold gap size wrong estimation (local)
104164243	104203746	1405431	1365984	NC_000014.9	scaffold_0	99.51		True
fake: scaffold gap size wrong estimation (local)
104161056	104163579	1408506	1405983	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
104141672	104160392	1428347	1409147	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
104097983	104141548	1472079	1428510	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
104072330	104097853	1497443	1472164	NC_000014.9	scaffold_0	97.95		True
fake: scaffold gap size wrong estimation (local)
104058880	104071699	1510847	1498049	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
104004596	104058601	1566870	1511055	NC_000014.9	scaffold_0	96.43		True
fake: scaffold gap size wrong estimation (local)
103993139	104004348	1578409	1567137	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
103968915	103992920	1602638	1578641	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
103956330	103968646	1615230	1602913	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
103952254	103956021	1619198	1615433	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
103922637	103952143	1648854	1619324	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
103913578	103922329	1657966	1649159	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
103896986	103913332	1674677	1658333	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
103893586	103895329	1680651	1678907	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
103866770	103893358	1707338	1680884	NC_000014.9	scaffold_0	99.43		True
fake: scaffold gap size wrong estimation (local)
103853394	103865620	1720619	1708423	NC_000014.9	scaffold_0	99.69		True
fake: scaffold gap size wrong estimation (local)
103850397	103852494	1723570	1721473	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
103847463	103849986	1726464	1723941	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
103834587	103847123	1739343	1726807	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
103798183	103833539	1775773	1740384	NC_000014.9	scaffold_0	99.12		True
fake: scaffold gap size wrong estimation (local)
103795100	103797089	1778713	1776724	NC_000014.9	scaffold_0	100.0		True
indel: indel (> 5bp)
103792548	103795060	1781271	1778759	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
103787981	103792199	1785883	1781664	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
103784670	103786769	1789234	1787134	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
103768754	103784403	1805085	1789448	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
103754982	103766676	1818656	1806931	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
103691481	103754747	1882195	1818945	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
103649852	103691101	1923727	1882527	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
103642791	103649571	1930803	1924023	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
103634224	103642096	1939345	1931477	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
103622959	103634090	1950652	1939508	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
103619787	103621855	1953742	1951674	NC_000014.9	scaffold_0	99.9		True
local misassembly
103621844	103622903	1954816	1953749	NC_000014.9	scaffold_0	99.25		True
fake: scaffold gap size wrong estimation (local)
103618175	103619619	1958186	1956747	NC_000014.9	scaffold_0	99.58		True
fake: scaffold gap size wrong estimation (local)
103615048	103618064	1961336	1958321	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
103609633	103614652	1966755	1961658	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
103604220	103608583	1972332	1967906	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
103588058	103602241	1988248	1974041	NC_000014.9	scaffold_0	99.58		True
fake: scaffold gap size wrong estimation (local)
103586505	103587525	1990197	1989176	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
103583546	103585493	1993153	1991206	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
103556457	103582753	2020269	1993977	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
103512350	103555510	2064252	2021124	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
103507276	103512168	2069285	2064393	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
103496564	103505866	2080054	2070738	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
103494290	103496429	2082300	2080159	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
103486320	103494037	2090262	2082547	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
103482290	103485067	2094246	2091472	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
103470465	103481784	2106146	2094817	NC_000014.9	scaffold_0	99.69		True
fake: scaffold gap size wrong estimation (local)
103467690	103469278	2108900	2107318	NC_000014.9	scaffold_0	99.5		True
fake: scaffold gap size wrong estimation (local)
103464294	103467009	2112345	2109630	NC_000014.9	scaffold_0	99.93		True
local misassembly
103452693	103464226	2124322	2112798	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
103451056	103452490	2126003	2124569	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
103418217	103450915	2159411	2126686	NC_000014.9	scaffold_0	99.58		True
local misassembly
103410589	103417902	2167223	2159914	NC_000014.9	scaffold_0	99.41		True
fake: scaffold gap size wrong estimation (local)
103405766	103409236	2172001	2168532	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
103391810	103405652	2185994	2172115	NC_000014.9	scaffold_0	99.9		True
indel: indel (> 5bp)
103390046	103391680	2187744	2186109	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
103369577	103389539	2208329	2188351	NC_000014.9	scaffold_0	99.64		True
fake: scaffold gap size wrong estimation (local)
103354088	103369110	2223717	2208745	NC_000014.9	scaffold_0	99.43		True
fake: scaffold gap size wrong estimation (local)
103334779	103353962	2243055	2223875	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
103326996	103334649	2250913	2243244	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
103315840	103326600	2261984	2251223	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
103313312	103315010	2264527	2262829	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
103307823	103312752	2269998	2265085	NC_000014.9	scaffold_0	99.31		True
fake: scaffold gap size wrong estimation (local)
103305006	103306448	2272787	2271345	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
103303878	103304884	2274431	2273425	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
103292123	103302541	2286219	2275807	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
103273095	103291766	2305342	2286653	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
103255522	103272891	2322889	2305508	NC_000014.9	scaffold_0	99.62		True
fake: scaffold gap size wrong estimation (local)
103214044	103254543	2364442	2323868	NC_000014.9	scaffold_0	99.46		True
fake: scaffold gap size wrong estimation (local)
103191907	103213987	2386628	2364550	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
103189726	103191806	2388869	2386789	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
103184965	103189627	2393626	2388964	NC_000014.9	scaffold_0	99.98		True
indel: indel (> 5bp)
103153304	103184920	2425273	2393721	NC_000014.9	scaffold_0	99.7		True
fake: scaffold gap size wrong estimation (local)
103145183	103152591	2433432	2426032	NC_000014.9	scaffold_0	99.66		True
fake: scaffold gap size wrong estimation (local)
103127341	103144984	2451370	2433781	NC_000014.9	scaffold_0	99.31		True
fake: scaffold gap size wrong estimation (local)
103117617	103127061	2461253	2451662	NC_000014.9	scaffold_0	99.55		True
fake: not a misassembly (possible transposable element)
67444864	67445577	2461967	2461254	NC_000014.9	scaffold_0	99.74		True
fake: not a misassembly (possible transposable element)
103109689	103117810	2470079	2461969	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
103103891	103109172	2475628	2470345	NC_000014.9	scaffold_0	99.92		True
indel: indel (<= 5bp)
103083810	103103794	2495705	2475729	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
103062781	103082933	2516766	2496544	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
103057733	103062578	2521953	2517103	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
103036332	103057438	2543332	2522225	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
102999194	103036169	2580631	2543456	NC_000014.9	scaffold_0	99.39		True
fake: scaffold gap size wrong estimation (local)
102985309	102998971	2594559	2580893	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
102948637	102985074	2631183	2594799	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
102921730	102948206	2658142	2631631	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
102904877	102919662	2674647	2659868	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
102877021	102904743	2702527	2674872	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
102812967	102876692	2766584	2702878	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
102809634	102811574	2769744	2767804	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
102802357	102808526	2776991	2770822	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
102777953	102800714	2801331	2778581	NC_000014.9	scaffold_0	99.67		True
fake: scaffold gap size wrong estimation (local)
102771945	102777162	2807352	2802132	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
102763520	102771614	2815710	2807667	NC_000014.9	scaffold_0	96.97		True
fake: scaffold gap size wrong estimation (local)
102758507	102762793	2820786	2816500	NC_000014.9	scaffold_0	100.0		True
indel: indel (> 5bp)
102744690	102758480	2834612	2820823	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
102732841	102743966	2846284	2835161	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
102678038	102732660	2901125	2846496	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
102675050	102676135	2904110	2903025	NC_000014.9	scaffold_0	100.0		True
indel: indel (> 5bp)
102657952	102674994	2921225	2904184	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
102614227	102657841	2964976	2921395	NC_000014.9	scaffold_0	99.62		True
fake: scaffold gap size wrong estimation (local)
102593026	102613464	2986121	2965709	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
102582528	102592839	2996607	2986295	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
102562323	102582369	3016807	2996771	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
102559167	102561864	3020169	3017472	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
102550004	102559037	3029320	3020289	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
102548160	102549545	3031191	3029806	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
102535779	102546652	3043795	3032660	NC_000014.9	scaffold_0	97.88		True
fake: scaffold gap size wrong estimation (local)
102532989	102535661	3046557	3043879	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
102516192	102531645	3063389	3047996	NC_000014.9	scaffold_0	99.4		True
fake: scaffold gap size wrong estimation (local)
102509821	102516095	3069753	3063478	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
102484003	102509536	3095600	3070034	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
102480930	102482863	3098555	3096622	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
102441598	102480223	3137989	3099306	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
102431356	102441413	3148217	3138165	NC_000014.9	scaffold_0	99.66		True
fake: scaffold gap size wrong estimation (local)
102426117	102431053	3153439	3148504	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
102410700	102425978	3168762	3153553	NC_000014.9	scaffold_0	99.5		True
fake: scaffold gap size wrong estimation (local)
102384898	102410455	3194520	3168972	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
102380149	102384322	3199257	3195084	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
102359254	102379676	3220131	3199675	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
102341071	102359105	3238296	3220260	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
102311097	102340882	3268154	3238444	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
102308664	102310075	3270562	3269151	NC_000014.9	scaffold_0	100.0		True
local misassembly
102310091	102311122	3271703	3270673	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
102288007	102308758	3293877	3273126	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
102224248	102287848	3357856	3294089	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
102172669	102224005	3409363	3358046	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
102135307	102172302	3446369	3409696	NC_000014.9	scaffold_0	98.91		True
fake: scaffold gap size wrong estimation (local)
102130961	102135167	3450761	3446558	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
102128629	102130094	3453180	3451722	NC_000014.9	scaffold_0	99.18		True
fake: scaffold gap size wrong estimation (local)
102068226	102128283	3513625	3453577	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
102013218	102067324	3568828	3514502	NC_000014.9	scaffold_0	99.53		True
fake: not a misassembly (possible transposable element)
20168906	20169584	3569508	3568829	NC_000014.9	scaffold_0	99.86		True
fake: not a misassembly (possible transposable element)
102000790	102013254	3581981	3569509	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
101998891	102000590	3583901	3582202	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
101995607	101998247	3587253	3584613	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
101942029	101995474	3640799	3587350	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
101939473	101941198	3643377	3641652	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
101934623	101939339	3648405	3643704	NC_000014.9	scaffold_0	99.43		True
fake: scaffold gap size wrong estimation (local)
101886468	101934465	3696575	3648655	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
101817019	101886186	3766472	3697037	NC_000014.9	scaffold_0	99.65		True
fake: scaffold gap size wrong estimation (local)
101782597	101816855	3800833	3766579	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
101761892	101782208	3821746	3801310	NC_000014.9	scaffold_0	99.35		True
fake: scaffold gap size wrong estimation (local)
101748751	101761583	3834796	3822115	NC_000014.9	scaffold_0	98.79		True
fake: scaffold gap size wrong estimation (local)
101724482	101748509	3859030	3835067	NC_000014.9	scaffold_0	99.71		True
fake: scaffold gap size wrong estimation (local)
101721297	101723860	3862129	3859565	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
101719176	101720995	3864346	3862527	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
101713424	101718991	3870316	3864770	NC_000014.9	scaffold_0	98.84		True
fake: scaffold gap size wrong estimation (local)
101698972	101711967	3884675	3871680	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
101691089	101698876	3892734	3884947	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
101689245	101690739	3894740	3893246	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
101687689	101688936	3896686	3895439	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
101685306	101686836	3899236	3897706	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
101683283	101684704	3901380	3899960	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
101678308	101680248	3903671	3901731	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
101676170	101677869	3906120	3904421	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
101608034	101674607	3974158	3907569	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
101572579	101607530	4009708	3974738	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
101561291	101571985	4020984	4010290	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
101524722	101560535	4057536	4021728	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
101490143	101524048	4091921	4058025	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
101444554	101489823	4137540	4092295	NC_000014.9	scaffold_0	99.78		True
indel: indel (> 5bp)
101426504	101444484	4155549	4137574	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
101419872	101426325	4162145	4155692	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
101402212	101419397	4179769	4162575	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
101352528	101402119	4229717	4179865	NC_000014.9	scaffold_0	99.41		True
indel: indel (<= 5bp)
101272015	101352466	4310202	4229774	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
101246679	101266790	4336117	4316003	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
101215019	101245229	4367540	4337529	NC_000014.9	scaffold_0	99.21		True
fake: scaffold gap size wrong estimation (local)
101211274	101214891	4371293	4367675	NC_000014.9	scaffold_0	99.67		True
fake: scaffold gap size wrong estimation (local)
101203446	101210673	4379098	4371872	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
101160284	101202537	4422277	4379990	NC_000014.9	scaffold_0	99.6		True
fake: scaffold gap size wrong estimation (local)
100985293	101160037	4597000	4422485	NC_000014.9	scaffold_0	99.63		True
fake: scaffold gap size wrong estimation (local)
100870249	100985092	4713511	4597159	NC_000014.9	scaffold_0	99.85		True
local misassembly
100813040	100869206	4769682	4713512	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
100796765	100812440	4785983	4770312	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
100727169	100795973	4855618	4786817	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
100707694	100726815	4875113	4855978	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
100686729	100706718	4896089	4876062	NC_000014.9	scaffold_0	99.57		True
fake: scaffold gap size wrong estimation (local)
100611680	100685069	4971465	4898057	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
100587506	100611403	4995624	4971729	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
100526935	100587194	5055952	4995920	NC_000014.9	scaffold_0	99.58		True
fake: scaffold gap size wrong estimation (local)
100514188	100526942	5069350	5056916	NC_000014.9	scaffold_0	97.47		True
fake: scaffold gap size wrong estimation (local)
100355391	100513952	5227881	5069655	NC_000014.9	scaffold_0	99.56		True
fake: scaffold gap size wrong estimation (local)
100352109	100355259	5231180	5228029	NC_000014.9	scaffold_0	99.59		True
fake: scaffold gap size wrong estimation (local)
100345533	100351514	5237770	5231794	NC_000014.9	scaffold_0	99.62		True
fake: scaffold gap size wrong estimation (local)
100336288	100344195	5246987	5239083	NC_000014.9	scaffold_0	99.56		True
fake: scaffold gap size wrong estimation (local)
100270460	100335478	5312867	5247843	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
100260779	100270277	5322594	5313097	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
100254950	100260639	5328386	5322702	NC_000014.9	scaffold_0	99.84		True
indel: indel (> 5bp)
100244986	100254858	5338319	5328465	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
100240322	100244337	5342956	5338913	NC_000014.9	scaffold_0	99.16		True
fake: scaffold gap size wrong estimation (local)
100196830	100239005	5386368	5344211	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
100181937	100195472	5401205	5387664	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
100166354	100180391	5416669	5402606	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
100050896	100166004	5532489	5417108	NC_000014.9	scaffold_0	99.67		True
fake: scaffold gap size wrong estimation (local)
100047122	100050360	5536202	5532964	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
100023433	100046620	5559821	5536635	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
100006278	100023221	5577064	5560102	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
99986201	100005691	5597163	5577664	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
99978382	99985690	5604915	5597605	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
99976311	99978260	5607065	5605118	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
99972105	99975879	5611248	5607474	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
99964267	99971977	5619122	5611412	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
99928186	99964009	5655726	5619408	NC_000014.9	scaffold_0	99.41		True
fake: scaffold gap size wrong estimation (local)
99915415	99927748	5669238	5656928	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
99899888	99915201	5684781	5669466	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
99846282	99899260	5738348	5685380	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
99793729	99846065	5790907	5738584	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
99770894	99793119	5813692	5791468	NC_000014.9	scaffold_0	99.98		True
indel: indel (> 5bp)
99766458	99770802	5818176	5813832	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
99702021	99766279	5882572	5818340	NC_000014.9	scaffold_0	99.65		True
fake: scaffold gap size wrong estimation (local)
99685099	99701552	5899464	5883017	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
99682289	99684107	5902274	5900456	NC_000014.9	scaffold_0	99.83		True
indel: indel (<= 5bp)
99673775	99682149	5910781	5902415	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
99604292	99673655	5980312	5910947	NC_000014.9	scaffold_0	99.65		True
fake: scaffold gap size wrong estimation (local)
99578122	99603319	6006501	5981302	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
99539472	99577729	6045204	6006910	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
99376648	99539333	6208050	6045351	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
99348667	99376503	6235986	6208157	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
99333164	99348205	6251438	6236439	NC_000014.9	scaffold_0	99.55		True
fake: scaffold gap size wrong estimation (local)
99301941	99332261	6282742	6252368	NC_000014.9	scaffold_0	99.55		True
indel: indel (> 5bp)
99271318	99301862	6313387	6282796	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
99229154	99270790	6355578	6313837	NC_000014.9	scaffold_0	99.52		True
fake: scaffold gap size wrong estimation (local)
99218376	99229042	6366394	6355729	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
99185448	99218090	6399245	6366614	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
99182429	99184768	6402208	6399869	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
99176024	99181880	6408597	6402741	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
99134651	99174871	6449900	6409699	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
98989478	99134498	6595010	6450027	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
98986270	98987376	6597998	6596892	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
98777629	98985677	6806750	6598711	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
98667114	98777479	6917225	6806901	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
98665494	98666849	6919149	6917793	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
98661690	98664685	6922910	6919914	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
98611837	98660735	6972631	6923736	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
98589000	98611741	6995471	6972731	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
98466142	98588193	7118165	6996123	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
98450522	98464990	7133669	7119192	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
98404875	98449726	7179241	7134404	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
98341130	98403864	7243264	7180293	NC_000014.9	scaffold_0	99.3		True
fake: scaffold gap size wrong estimation (local)
98336286	98340785	7248169	7243651	NC_000014.9	scaffold_0	99.42		True
fake: scaffold gap size wrong estimation (local)
98330985	98336119	7253485	7248351	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
98315128	98330482	7269353	7254004	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
98312887	98314933	7271626	7269580	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
98283244	98312721	7301299	7271840	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
98059188	98282935	7525368	7301566	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
98020070	98059004	7564425	7525481	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
97905407	98015615	7680788	7570633	NC_000014.9	scaffold_0	99.63		True
fake: scaffold gap size wrong estimation (local)
97858443	97904050	7727600	7682005	NC_000014.9	scaffold_0	99.85		True
local misassembly
97856914	97858571	7729658	7728004	NC_000014.9	scaffold_0	98.92		True
fake: scaffold gap size wrong estimation (local)
97849392	97856545	7737172	7730019	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
97817660	97849162	7768914	7737344	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
97788439	97816875	7798032	7769594	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
97729070	97787760	7857834	7799213	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
97470285	97728917	8116910	7857990	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
97468023	97470168	8119211	8117066	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
97465204	97466832	8122021	8120393	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
97443188	97464117	8143995	8123052	NC_000014.9	scaffold_0	99.88		True
indel: indel (<= 5bp)
97432130	97443152	8155039	8144033	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
97394353	97431800	8192790	8155347	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
97362799	97394123	8224286	8192979	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
97330922	97362410	8256145	8224667	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
97261427	97330833	8325659	8256247	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
97260189	97261227	8326917	8325879	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
97223592	97259963	8363488	8327071	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
97218500	97223403	8368608	8363638	NC_000014.9	scaffold_0	98.63		True
fake: scaffold gap size wrong estimation (local)
97204902	97218377	8382258	8368796	NC_000014.9	scaffold_0	99.57		True
fake: scaffold gap size wrong estimation (local)
97167808	97204758	8419295	8382359	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
97163514	97166897	8423392	8420010	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
97161386	97163186	8425613	8423813	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
97136253	97161264	8450799	8425776	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
96884088	97136060	8703016	8450927	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
96796778	96883143	8790333	8703970	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
96783025	96796491	8803602	8790648	NC_000014.9	scaffold_0	96.11		True
fake: scaffold gap size wrong estimation (local)
96767551	96782942	8819009	8803688	NC_000014.9	scaffold_0	99.32		True
fake: scaffold gap size wrong estimation (local)
96746737	96765004	8839327	8821045	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
96507434	96746298	9078328	8839717	NC_000014.9	scaffold_0	99.56		True
fake: scaffold gap size wrong estimation (local)
96466362	96507305	9119440	9078497	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
96454776	96465257	9130983	9120505	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
96440138	96454677	9145736	9131198	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
96433710	96439679	9152216	9146249	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
96431267	96433073	9154600	9152796	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
96375613	96429611	9210140	9156181	NC_000014.9	scaffold_0	99.64		True
fake: scaffold gap size wrong estimation (local)
96308435	96375435	9277533	9210309	NC_000014.9	scaffold_0	99.5		True
fake: scaffold gap size wrong estimation (local)
96294750	96308215	9291298	9277715	NC_000014.9	scaffold_0	98.94		True
fake: scaffold gap size wrong estimation (local)
96243317	96294345	9342672	9291635	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
96216734	96243219	9369239	9342757	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
96176373	96216517	9409616	9369434	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
96069309	96176168	9516560	9409744	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
96031441	96068865	9554387	9516948	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
95912293	96031194	9673230	9554572	NC_000014.9	scaffold_0	99.54		True
fake: scaffold gap size wrong estimation (local)
95815570	95911773	9769728	9673624	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
95812122	95815185	9773298	9770235	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
95799634	95811472	9785664	9773820	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
95772506	95798777	9812738	9786463	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
95763082	95772327	9822159	9812927	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
95666006	95762927	9919216	9822258	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
95656072	95665801	9929168	9919435	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
95653976	95655195	9931391	9930178	NC_000014.9	scaffold_0	99.51		True
fake: scaffold gap size wrong estimation (local)
95650695	95652767	9934532	9932460	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
95638426	95650519	9946826	9934733	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
95617111	95637817	9968215	9947490	NC_000014.9	scaffold_0	99.45		True
fake: scaffold gap size wrong estimation (local)
95615019	95616383	9970332	9968968	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
95613539	95614628	9972244	9971155	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
95611358	95612158	9974493	9973693	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
95603928	95611139	9982072	9974871	NC_000014.9	scaffold_0	99.68		True
fake: scaffold gap size wrong estimation (local)
95601948	95603197	9984059	9982798	NC_000014.9	scaffold_0	99.05		True
fake: scaffold gap size wrong estimation (local)
95587567	95601346	9998420	9984629	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
95580005	95587061	10005939	9998883	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
95568811	95579738	10016990	10006371	NC_000014.9	scaffold_0	96.74		True
fake: scaffold gap size wrong estimation (local)
95565440	95566738	10020080	10018782	NC_000014.9	scaffold_0	99.38		True
local misassembly
95563893	95564793	10021163	10020263	NC_000014.9	scaffold_0	99.11		True
fake: scaffold gap size wrong estimation (local)
95555786	95562364	10029201	10022592	NC_000014.9	scaffold_0	98.99		True
indel: indel (> 5bp)
95474044	95555583	10111009	10029397	NC_000014.9	scaffold_0	99.66		True
fake: scaffold gap size wrong estimation (local)
95457087	95473736	10127986	10111346	NC_000014.9	scaffold_0	99.51		True
fake: scaffold gap size wrong estimation (local)
95423931	95456832	10160837	10128254	NC_000014.9	scaffold_0	98.58		True
fake: scaffold gap size wrong estimation (local)
95375247	95423541	10210518	10161168	NC_000014.9	scaffold_0	99.65		True
fake: scaffold gap size wrong estimation (local)
95351028	95375003	10234807	10210867	NC_000014.9	scaffold_0	99.69		True
indel: indel (<= 5bp)
95320117	95350992	10265736	10234845	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
95293375	95319882	10292477	10265970	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
95245281	95293237	10340507	10292592	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
95176828	95245011	10408890	10340735	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
95036843	95175830	10548585	10409759	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
94952571	95035790	10632876	10549706	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
94949662	94952022	10635750	10633390	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
94941130	94948866	10644157	10636420	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
94938680	94940177	10646664	10645169	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
94929270	94938558	10656052	10646764	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
94925122	94928989	10660148	10656281	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
94918002	94924668	10667194	10660526	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
94894407	94917555	10691230	10667744	NC_000014.9	scaffold_0	98.05		True
fake: scaffold gap size wrong estimation (local)
94890778	94893655	10694871	10691994	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
94819408	94889233	10765924	10695984	NC_000014.9	scaffold_0	99.53		True
fake: scaffold gap size wrong estimation (local)
94816146	94818621	10769046	10766571	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
94671892	94814908	10913225	10770248	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
94637806	94656455	10946936	10928260	NC_000014.9	scaffold_0	98.45		True
fake: scaffold gap size wrong estimation (local)
94610491	94637573	10974233	10947153	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
94495270	94610279	11089574	10974411	NC_000014.9	scaffold_0	99.62		True
fake: scaffold gap size wrong estimation (local)
94461976	94495168	11122870	11089702	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
94452599	94461756	11132258	11123101	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
94365221	94452381	11219472	11132476	NC_000014.9	scaffold_0	99.7		True
fake: scaffold gap size wrong estimation (local)
94346408	94363743	11239236	11221917	NC_000014.9	scaffold_0	99.64		True
fake: scaffold gap size wrong estimation (local)
94301773	94346054	11284120	11239833	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
94264177	94301242	11321608	11284550	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
94235561	94263777	11350114	11321904	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
94174287	94235315	11411267	11350347	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
94133454	94173980	11451921	11411526	NC_000014.9	scaffold_0	99.23		True
fake: scaffold gap size wrong estimation (local)
94092809	94133245	11492540	11452115	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
94074045	94092441	11511179	11492812	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
94069081	94073066	11516070	11512085	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
94065513	94068723	11519604	11516394	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
94014036	94065074	11571078	11520027	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
93758596	94013141	11826296	11571844	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
93722774	93758506	11862283	11826454	NC_000014.9	scaffold_0	99.65		True
fake: scaffold gap size wrong estimation (local)
93657519	93722035	11927499	11863045	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
93551286	93657368	12033912	11927693	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
93493914	93551149	12091306	12034061	NC_000014.9	scaffold_0	99.85		True
indel: indel (> 5bp)
93460072	93493881	12125449	12091397	NC_000014.9	scaffold_0	99.16		True
indel: stretch of mismatches
93419359	93459890	12166167	12125631	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
93404553	93413405	12181207	12172354	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
93357718	93404340	12228256	12181432	NC_000014.9	scaffold_0	99.56		True
indel: indel (> 5bp)
93291015	93357681	12294968	12228335	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
93226830	93290453	12359069	12295457	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
93221962	93226682	12363970	12359248	NC_000014.9	scaffold_0	99.6		True
fake: scaffold gap size wrong estimation (local)
93202565	93215378	12383308	12370495	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
93181615	93199239	12402667	12385047	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
93172363	93180520	12412054	12403898	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
93169513	93170878	12414699	12413334	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
93165524	93168708	12419210	12415708	NC_000014.9	scaffold_0	96.47		True
fake: scaffold gap size wrong estimation (local)
93159989	93164125	12424627	12420493	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
93156439	93158212	12427820	12426047	NC_000014.9	scaffold_0	100.0		True
indel: stretch of mismatches
93131515	93156384	12452700	12427875	NC_000014.9	scaffold_0	99.16		True
fake: scaffold gap size wrong estimation (local)
93127614	93131084	12456579	12453112	NC_000014.9	scaffold_0	99.65		True
fake: scaffold gap size wrong estimation (local)
93066484	93127313	12517545	12456788	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
93059743	93066319	12524319	12517743	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
92912269	93058481	12671850	12525651	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
92874149	92910708	12710164	12673365	NC_000014.9	scaffold_0	99.28		True
fake: scaffold gap size wrong estimation (local)
92866187	92869073	12716374	12713488	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
92858679	92864848	12723794	12717626	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
92850261	92854486	12735635	12731411	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
92847599	92849773	12738374	12736196	NC_000014.9	scaffold_0	99.45		True
local misassembly
92848348	92850125	12740157	12738376	NC_000014.9	scaffold_0	99.33		True
fake: scaffold gap size wrong estimation (local)
92815896	92847443	12772371	12740824	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
92807987	92815717	12780184	12772454	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
92799671	92807330	12788472	12780813	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
92796982	92799287	12791178	12788873	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
92777741	92796687	12810496	12791622	NC_000014.9	scaffold_0	99.55		True
fake: scaffold gap size wrong estimation (local)
92767450	92777462	12820689	12810677	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
92743026	92767175	12845066	12820942	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
92719340	92742333	12868744	12845753	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
92708857	92719181	12879189	12868865	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
92679336	92707933	12908703	12880085	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
92674882	92679062	12913136	12908956	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
92664543	92673523	12923514	12914532	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
92640768	92664363	12947244	12923649	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
92561225	92639892	13026783	12948160	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
92547272	92560983	13040771	13027051	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
92537655	92547034	13051533	13042161	NC_000014.9	scaffold_0	99.66		True
fake: scaffold gap size wrong estimation (local)
92535675	92536711	13053475	13052439	NC_000014.9	scaffold_0	100.0		True
local misassembly
92536843	92537657	13054437	13053623	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
92480461	92535688	13110818	13055766	NC_000014.9	scaffold_0	99.56		True
fake: scaffold gap size wrong estimation (local)
92474872	92480303	13116389	13110958	NC_000014.9	scaffold_0	99.65		True
fake: scaffold gap size wrong estimation (local)
92456338	92474666	13134851	13116542	NC_000014.9	scaffold_0	99.54		True
fake: scaffold gap size wrong estimation (local)
92262589	92455731	13328665	13135436	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
92251104	92262035	13340027	13329104	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
92230741	92243052	13360050	13347745	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
92229098	92230250	13361625	13360473	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
92187525	92227796	13403192	13362915	NC_000014.9	scaffold_0	99.62		True
fake: scaffold gap size wrong estimation (local)
92173519	92187367	13417063	13403327	NC_000014.9	scaffold_0	99.14		True
fake: scaffold gap size wrong estimation (local)
92122764	92173370	13467815	13417212	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
92118170	92120817	13472136	13469489	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
92116495	92117870	13473788	13472413	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
92076862	92114913	13513251	13475234	NC_000014.9	scaffold_0	99.15		True
fake: scaffold gap size wrong estimation (local)
92030151	92076451	13560117	13513583	NC_000014.9	scaffold_0	98.77		True
fake: scaffold gap size wrong estimation (local)
92024056	92029978	13566166	13560258	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
92018980	92023872	13571246	13566356	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
91963021	92018125	13627019	13571974	NC_000014.9	scaffold_0	99.85		True
indel: indel (> 5bp)
91929083	91962973	13661003	13627115	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
91915689	91928890	13674380	13661182	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
91853029	91914431	13736886	13675512	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
91741998	91852590	13848082	13737374	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
91739871	91741608	13850164	13848427	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
91736502	91739464	13853517	13850551	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
91709698	91736075	13880398	13854021	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
91672023	91709529	13917994	13880510	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
91669354	91671221	13920656	13918789	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
91665825	91668390	13924125	13921560	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
91655105	91665596	13935164	13924343	NC_000014.9	scaffold_0	99.53		True
fake: scaffold gap size wrong estimation (local)
91653178	91654312	13937136	13936002	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
91650985	91652524	13939566	13938027	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
91648533	91649814	13942228	13940956	NC_000014.9	scaffold_0	98.83		True
fake: scaffold gap size wrong estimation (local)
91598858	91634732	13994856	13958961	NC_000014.9	scaffold_0	99.59		True
fake: scaffold gap size wrong estimation (local)
91586572	91598730	14007166	13995009	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
91578248	91586112	14015513	14007649	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
91574761	91577972	14019319	14015866	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
91569265	91571810	14025492	14022945	NC_000014.9	scaffold_0	99.41		True
fake: scaffold gap size wrong estimation (local)
91566446	91568883	14028226	14025790	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
91564697	91566096	14029938	14028539	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
91558402	91563042	14036186	14031544	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
91549589	91556555	14044809	14037844	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
91543869	91548863	14050410	14045422	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
91504343	91543697	14090237	14050513	NC_000014.9	scaffold_0	99.28		True
fake: scaffold gap size wrong estimation (local)
91501970	91503316	14092581	14091235	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
91499823	91501694	14094930	14093058	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
91496183	91498529	14098417	14096071	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
91489199	91495947	14105444	14098697	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
91450900	91489022	14143843	14105723	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
91446740	91447930	14147400	14146210	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
91444767	91446259	14149555	14148063	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
91436801	91443572	14157492	14150721	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
91417862	91431011	14178119	14164974	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
91401363	91417622	14194708	14178402	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
91372544	91401250	14223565	14194855	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
91345194	91372457	14250957	14223699	NC_000014.9	scaffold_0	99.63		True
fake: scaffold gap size wrong estimation (local)
91293597	91344699	14302461	14251361	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
91205848	91293353	14391408	14303962	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
91200198	91205755	14397066	14391522	NC_000014.9	scaffold_0	99.69		True
fake: scaffold gap size wrong estimation (local)
91194654	91199461	14402624	14397821	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
91190156	91193846	14407026	14403336	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
91157268	91190000	14439899	14407186	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
91143102	91157093	14454024	14440037	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
91130389	91142822	14466755	14454323	NC_000014.9	scaffold_0	99.86		True
indel: indel (> 5bp)
91064619	91130320	14532659	14466807	NC_000014.9	scaffold_0	99.66		True
fake: scaffold gap size wrong estimation (local)
90983818	91064439	14613799	14532963	NC_000014.9	scaffold_0	99.36		True
fake: scaffold gap size wrong estimation (local)
90910817	90983115	14686737	14614407	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
90885749	90910687	14711723	14686808	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
90861893	90885291	14735717	14712169	NC_000014.9	scaffold_0	99.37		True
fake: scaffold gap size wrong estimation (local)
90855751	90860915	14741828	14736663	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
90842511	90855621	14755081	14741979	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
90816565	90842085	14781059	14755534	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
90804570	90816312	14792973	14781230	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
90801933	90804161	14796090	14793415	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
90799022	90801225	14798959	14796756	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
90796721	90798179	14801369	14799911	NC_000014.9	scaffold_0	99.66		True
fake: scaffold gap size wrong estimation (local)
90794473	90795237	14803535	14802771	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
90772016	90792149	14825731	14805592	NC_000014.9	scaffold_0	99.86		True
local misassembly
90758450	90771920	14839482	14826012	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
90714572	90758343	14883644	14839613	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
90710236	90713991	14888023	14884268	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
90694260	90708941	14903568	14889323	NC_000014.9	scaffold_0	96.96		True
fake: scaffold gap size wrong estimation (local)
90688628	90694199	14909473	14903902	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
90573527	90688395	15024608	14909697	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
90501763	90573411	15096499	15024729	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
90493045	90501507	15105749	15096754	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
90444796	90492580	15153984	15106226	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
90434152	90444600	15164573	15154137	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
90412709	90434012	15186085	15164786	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
90353365	90412462	15245341	15186293	NC_000014.9	scaffold_0	99.66		True
fake: scaffold gap size wrong estimation (local)
90343842	90352456	15254773	15246157	NC_000014.9	scaffold_0	99.63		True
fake: scaffold gap size wrong estimation (local)
90326472	90342844	15272094	15255736	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
90246561	90326309	15352045	15272214	NC_000014.9	scaffold_0	99.42		True
fake: scaffold gap size wrong estimation (local)
90212350	90245572	15386142	15352914	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
90127818	90206742	15470763	15392026	NC_000014.9	scaffold_0	99.47		True
fake: scaffold gap size wrong estimation (local)
90109178	90127469	15489426	15471139	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
90101993	90109040	15496619	15489574	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
90085855	90101682	15512770	15496871	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
90020556	90085535	15578132	15513047	NC_000014.9	scaffold_0	99.65		True
fake: scaffold gap size wrong estimation (local)
89931247	90020504	15667378	15578181	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
89928836	89931002	15669777	15667611	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
89925951	89927784	15672565	15670732	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
89835871	89925541	15762838	15673190	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
89788889	89835496	15810030	15763242	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
89776557	89788302	15822595	15810843	NC_000014.9	scaffold_0	99.35		True
fake: scaffold gap size wrong estimation (local)
89645454	89776442	15953831	15822678	NC_000014.9	scaffold_0	99.71		True
fake: scaffold gap size wrong estimation (local)
89611735	89645307	15987521	15953952	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
89608073	89611584	15991127	15987617	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
89528639	89607557	16070663	15991733	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
89507123	89528409	16092083	16070880	NC_000014.9	scaffold_0	99.34		True
fake: scaffold gap size wrong estimation (local)
89467897	89505459	16131245	16093639	NC_000014.9	scaffold_0	99.78		True
indel: indel (> 5bp)
89463274	89467823	16135857	16131311	NC_000014.9	scaffold_0	99.85		True
local misassembly
89453563	89462727	16145642	16136478	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
89447968	89453142	16151216	16146042	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
89446291	89447809	16152885	16151367	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
89434917	89446105	16164435	16153243	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
89417167	89433212	16182174	16166134	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
89415609	89416997	16183732	16182340	NC_000014.9	scaffold_0	99.71		True
fake: scaffold gap size wrong estimation (local)
89362761	89414511	16236530	16184784	NC_000014.9	scaffold_0	99.56		True
fake: scaffold gap size wrong estimation (local)
89355372	89360711	16243214	16237870	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
89343654	89354554	16254861	16243963	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
89334736	89343426	16263699	16255015	NC_000014.9	scaffold_0	99.56		True
fake: scaffold gap size wrong estimation (local)
89325215	89333749	16273079	16264557	NC_000014.9	scaffold_0	99.78		True
indel: indel (> 5bp)
89317045	89325223	16281267	16273080	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
89314438	89316536	16284036	16281938	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
89311699	89314110	16286760	16284349	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
89285924	89310998	16312430	16287410	NC_000014.9	scaffold_0	99.57		True
fake: scaffold gap size wrong estimation (local)
89192804	89285592	16405514	16312715	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
89130813	89192191	16467439	16406049	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
88918372	89130616	16679875	16467642	NC_000014.9	scaffold_0	99.81		True
relocation, inconsistency = -8394
88862590	88926700	16744045	16679941	NC_000014.9	scaffold_0	99.98		True
indel: indel (> 5bp)
88811859	88862551	16794789	16744140	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
88801828	88811460	16804788	16795155	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
88797079	88801417	16809533	16805195	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
88792778	88795884	16813611	16810505	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
88732387	88792602	16873881	16813762	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
88684881	88731207	16921343	16875036	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
88630139	88684236	16980359	16926084	NC_000014.9	scaffold_0	99.65		True
fake: scaffold gap size wrong estimation (local)
88573474	88629988	17036897	16980462	NC_000014.9	scaffold_0	99.71		True
fake: scaffold gap size wrong estimation (local)
88518418	88573154	17092046	17037166	NC_000014.9	scaffold_0	99.52		True
fake: scaffold gap size wrong estimation (local)
88458403	88518015	17152307	17092382	NC_000014.9	scaffold_0	99.25		True
fake: scaffold gap size wrong estimation (local)
88448819	88456039	17161504	17154285	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
88292995	88442957	17317295	17167422	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
88231281	88292583	17378895	17317603	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
88229479	88231116	17380731	17379094	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
88220422	88228967	17389789	17381244	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
88131424	88220207	17478788	17389961	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
88124874	88131175	17485286	17478985	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
88082542	88124302	17527562	17485821	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
87778701	88082447	17831268	17527661	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
87664724	87776233	17945056	17833389	NC_000014.9	scaffold_0	99.71		True
fake: scaffold gap size wrong estimation (local)
87582235	87664639	18027445	17945166	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
87428890	87581890	18180803	18027748	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
87359350	87413949	18251253	18197026	NC_000014.9	scaffold_0	99.09		True
fake: scaffold gap size wrong estimation (local)
87285315	87355446	18325845	18255621	NC_000014.9	scaffold_0	99.67		True
indel: indel (> 5bp)
87283482	87285284	18327768	18325940	NC_000014.9	scaffold_0	98.2		True
fake: scaffold gap size wrong estimation (local)
87250851	87283353	18360318	18327859	NC_000014.9	scaffold_0	99.62		True
fake: scaffold gap size wrong estimation (local)
87237387	87250655	18373766	18360481	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
87199301	87235500	18411638	18375467	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
87089845	87199129	18520933	18411730	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
87054213	87089718	18556491	18521021	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
87033124	87053924	18577856	18556807	NC_000014.9	scaffold_0	98.75		True
fake: scaffold gap size wrong estimation (local)
86884060	87032936	18726792	18578005	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
86879659	86883851	18731203	18727016	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
86875070	86877685	18735447	18732832	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
86809133	86874908	18801403	18735643	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
86770148	86808959	18840355	18801553	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
86747017	86769957	18863472	18840530	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
86696080	86746819	18914372	18863642	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
86679354	86694861	18931007	18915498	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
86669701	86679115	18940580	18931157	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
86611761	86669572	18998565	18940718	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
86595584	86608782	19014152	19000954	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
86583186	86592136	19023616	19014657	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
86474701	86582489	19132063	19024262	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
86451756	86471281	19155213	19135801	NC_000014.9	scaffold_0	98.79		True
indel: indel (> 5bp)
86444375	86451641	19162540	19155278	NC_000014.9	scaffold_0	98.83		True
fake: scaffold gap size wrong estimation (local)
86406500	86443285	19201227	19163628	NC_000014.9	scaffold_0	99.57		True
fake: scaffold gap size wrong estimation (local)
86395268	86406313	19212476	19201429	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
86376100	86395059	19231643	19212684	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
86336383	86375617	19271159	19232009	NC_000014.9	scaffold_0	99.63		True
fake: scaffold gap size wrong estimation (local)
86330798	86336172	19276696	19271322	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
86317727	86330623	19289786	19276911	NC_000014.9	scaffold_0	99.69		True
fake: scaffold gap size wrong estimation (local)
86311657	86312707	19297574	19296524	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
86308653	86311321	19300599	19297937	NC_000014.9	scaffold_0	99.51		True
fake: scaffold gap size wrong estimation (local)
86306327	86308408	19302915	19300834	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
86289744	86306008	19319447	19303179	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
86246847	86288249	19362204	19320852	NC_000014.9	scaffold_0	99.11		True
fake: scaffold gap size wrong estimation (local)
86240929	86244725	19367704	19363913	NC_000014.9	scaffold_0	99.16		True
fake: scaffold gap size wrong estimation (local)
86199084	86240759	19409509	19367823	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
86188322	86198436	19420115	19410012	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
86152262	86186899	19456329	19421617	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
86111162	86152138	19497241	19456421	NC_000014.9	scaffold_0	99.42		True
fake: scaffold gap size wrong estimation (local)
86093951	86095952	19516851	19514850	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
86080462	86093709	19530418	19517167	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
85946313	86074659	19666510	19538056	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
85894078	85946035	19718837	19666835	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
85891653	85893474	19721198	19719377	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
85876795	85885281	19735840	19727354	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
85848712	85876601	19763869	19735975	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
85830426	85846693	19781914	19765652	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
85791713	85829086	19820538	19783149	NC_000014.9	scaffold_0	99.68		True
fake: scaffold gap size wrong estimation (local)
85775712	85791607	19836565	19820663	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
85736746	85775357	19875450	19836830	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
85733047	85734801	19878936	19877182	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
85689735	85732516	19922280	19879566	NC_000014.9	scaffold_0	99.64		True
fake: scaffold gap size wrong estimation (local)
85657666	85689451	19954435	19922522	NC_000014.9	scaffold_0	98.81		True
fake: scaffold gap size wrong estimation (local)
85592810	85655885	20019109	19956026	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
85578235	85592365	20033681	20019556	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
85518962	85578124	20092920	20033773	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
85491743	85518714	20120142	20093178	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
85353160	85491597	20258905	20120240	NC_000014.9	scaffold_0	99.63		True
fake: scaffold gap size wrong estimation (local)
85298659	85352041	20313342	20259968	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
85235812	85298294	20376203	20313713	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
85230703	85235549	20381342	20376496	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
85224229	85228756	20387605	20383080	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
85220383	85223530	20391421	20388275	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
85213068	85220158	20398679	20391588	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
85140606	85211544	20471005	20400071	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
85102086	85140405	20509475	20471140	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
85021651	85101727	20589741	20509762	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
85005159	85021241	20606280	20590197	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
84993472	85004868	20617953	20606552	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
84988998	84993314	20622417	20618099	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
84812473	84988805	20798849	20622577	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
84790359	84812376	20820953	20798939	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
84730306	84790091	20880946	20821173	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
84683754	84730012	20927527	20881304	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
84654111	84683550	20957166	20927760	NC_000014.9	scaffold_0	99.62		True
fake: scaffold gap size wrong estimation (local)
84650979	84652411	20960151	20958719	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
84636688	84650134	20974372	20960923	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
84603599	84636183	21007398	20974841	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
84600786	84603479	21010205	21007512	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
84596477	84600630	21014462	21010310	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
84588176	84596294	21022860	21014742	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
84511996	84586572	21098903	21024330	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
84508947	84510222	21101758	21100479	NC_000014.9	scaffold_0	98.99		True
fake: scaffold gap size wrong estimation (local)
84505846	84506947	21104623	21103522	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
84489607	84503958	21120670	21106321	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
84447401	84488737	21162788	21121456	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
84443919	84446845	21166142	21163249	NC_000014.9	scaffold_0	98.6		True
fake: scaffold gap size wrong estimation (local)
84439382	84442581	21170666	21167467	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
84378939	84439054	21231016	21170891	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
84376295	84378825	21233678	21231148	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
84276910	84376187	21333484	21233803	NC_000014.9	scaffold_0	99.51		True
fake: scaffold gap size wrong estimation (local)
84192454	84276776	21417841	21333578	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
84159606	84192337	21450804	21418073	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
84118035	84159448	21492290	21450909	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
84113691	84114206	21496893	21496378	NC_000014.9	scaffold_0	99.61		True
local misassembly
84112776	84113545	21497963	21497194	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
84104150	84111958	21506553	21498737	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
84101678	84103930	21509074	21506822	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
83998960	84099458	21611428	21510939	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
83881544	83998311	21728528	21611876	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
83858374	83881440	21751713	21728647	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
83818165	83858093	21791998	21752070	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
83808781	83817438	21801177	21792519	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
83786464	83808600	21823473	21801337	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
83768293	83786283	21841712	21823722	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
83722333	83768006	21887649	21841974	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
83719484	83722015	21890441	21887911	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
83705113	83719279	21904690	21890610	NC_000014.9	scaffold_0	99.37		True
fake: scaffold gap size wrong estimation (local)
83700029	83704669	21909707	21905067	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
83697517	83699389	21912139	21910267	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
83645191	83696611	21964410	21912991	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
83227073	83639144	22381744	21969147	NC_000014.9	scaffold_0	99.7		True
fake: scaffold gap size wrong estimation (local)
83204584	83220658	22404802	22388728	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
83100903	83201862	22510129	22409862	NC_000014.9	scaffold_0	99.19		True
fake: scaffold gap size wrong estimation (local)
83075213	83100728	22535778	22510288	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
83072938	83074328	22537950	22536561	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
83070031	83071302	22540607	22539354	NC_000014.9	scaffold_0	97.19		True
local misassembly
83071483	83072643	22541769	22540609	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
83068455	83069906	22544747	22543296	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
83064596	83065914	22548222	22546903	NC_000014.9	scaffold_0	99.62		True
fake: scaffold gap size wrong estimation (local)
83061497	83063140	22551179	22549536	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
83016620	83060085	22595878	22552419	NC_000014.9	scaffold_0	99.86		True
local misassembly
83003197	83016528	22609511	22596177	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
82990041	83003007	22622654	22609685	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
82954450	82989830	22658194	22622777	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
82944478	82953763	22668118	22658830	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
82942170	82943807	22670409	22668772	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
82939841	82941187	22672840	22671494	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
82935614	82937761	22676918	22674771	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
82886186	82935413	22726317	22677073	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
82825878	82885825	22786624	22726668	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
82814916	82825748	22797566	22786734	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
82676304	82814260	22936319	22798175	NC_000014.9	scaffold_0	99.65		True
fake: scaffold gap size wrong estimation (local)
82652007	82674927	22960650	22937729	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
82607259	82651711	23005318	22960870	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
82474255	82606846	23137960	23005686	NC_000014.9	scaffold_0	99.53		True
fake: scaffold gap size wrong estimation (local)
82353458	82472931	23258575	23139093	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
82311163	82348329	23300957	23263791	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
82215167	82310447	23397564	23301655	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
82205942	82214962	23406761	23397747	NC_000014.9	scaffold_0	99.89		True
indel: indel (<= 5bp)
82088938	82205891	23523725	23406817	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
82064171	82088531	23548431	23524070	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
81946025	82063211	23662246	23549296	NC_000014.9	scaffold_0	96.27		True
fake: scaffold gap size wrong estimation (local)
81923562	81944958	23684683	23663291	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
81864829	81923088	23743383	23685137	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
81829588	81860467	23778890	23748018	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
81796609	81829421	23812078	23779096	NC_000014.9	scaffold_0	99.46		True
fake: scaffold gap size wrong estimation (local)
81793597	81796428	23815056	23812225	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
81789979	81793326	23818574	23815222	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
81784370	81789060	23824206	23819512	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
81780611	81784035	23827971	23824547	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
81712717	81780368	23895745	23828196	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
81664497	81712534	23944209	23895987	NC_000014.9	scaffold_0	99.57		True
fake: scaffold gap size wrong estimation (local)
81649945	81663642	23958791	23945088	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
81645974	81649605	23963823	23960192	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
81643248	81645600	23966539	23964187	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
81604768	81642992	24005085	23966863	NC_000014.9	scaffold_0	99.86		True
indel: stretch of mismatches
81597240	81604667	24012613	24005186	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
81590933	81596646	24019044	24013295	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
81582233	81589844	24027761	24020141	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
81565083	81581495	24044734	24028337	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
81552538	81564797	24057282	24045022	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
81546774	81552452	24063087	24057409	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
81543348	81545651	24066404	24064101	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
81466375	81543074	24143383	24066679	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
81463228	81466167	24146497	24143566	NC_000014.9	scaffold_0	99.63		True
fake: scaffold gap size wrong estimation (local)
81460267	81462041	24149440	24147666	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
81358897	81457316	24251979	24153212	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
81357493	81358575	24253363	24252281	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
81283757	81355884	24329180	24254850	NC_000014.9	scaffold_0	99.69		True
fake: scaffold gap size wrong estimation (local)
81245305	81283548	24367644	24329393	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
81241785	81244538	24371141	24368388	NC_000014.9	scaffold_0	99.82		True
indel: indel (> 5bp)
81220943	81241681	24392079	24371211	NC_000014.9	scaffold_0	98.98		True
fake: scaffold gap size wrong estimation (local)
81122126	81220252	24490685	24392716	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
81120331	81122014	24492559	24490876	NC_000014.9	scaffold_0	99.64		True
fake: scaffold gap size wrong estimation (local)
81075924	81114544	24536479	24497840	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
81073037	81075548	24539343	24536832	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
81038702	81072865	24573652	24539504	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
81036184	81037734	24576156	24574606	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
81026974	81034966	24585461	24577468	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
81013316	81026833	24599163	24585647	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
81002970	81012025	24609301	24600258	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
80973404	81002234	24638629	24609777	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
80948659	80973221	24663832	24638828	NC_000014.9	scaffold_0	99.55		True
fake: scaffold gap size wrong estimation (local)
80935647	80948402	24676822	24664078	NC_000014.9	scaffold_0	99.66		True
fake: scaffold gap size wrong estimation (local)
80874813	80935565	24737587	24676882	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
80859475	80874405	24752912	24737982	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
80856742	80858151	24755525	24754117	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
80801940	80856620	24810444	24755736	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
80754622	80801477	24857826	24810976	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
80674073	80754481	24938403	24857942	NC_000014.9	scaffold_0	99.58		True
fake: scaffold gap size wrong estimation (local)
80667949	80673518	24944488	24938921	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
80642090	80667743	24970229	24944644	NC_000014.9	scaffold_0	99.69		True
fake: scaffold gap size wrong estimation (local)
80629162	80641855	24983113	24970420	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
80623478	80628793	24988735	24983400	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
80593755	80622417	25018404	24989745	NC_000014.9	scaffold_0	99.66		True
fake: scaffold gap size wrong estimation (local)
80562025	80593558	25050216	25018563	NC_000014.9	scaffold_0	99.36		True
fake: scaffold gap size wrong estimation (local)
80489271	80561902	25122966	25050332	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
80369367	80486459	25244314	25127278	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
80287496	80367849	25325865	25245541	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
80250221	80285911	25363036	25327337	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
80176621	80246069	25436786	25367377	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
80106038	80176395	25507578	25437020	NC_000014.9	scaffold_0	99.64		True
fake: scaffold gap size wrong estimation (local)
80094526	80105358	25519098	25508266	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
80038757	80088952	25576633	25526323	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
80034751	80038276	25580620	25577095	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
80026134	80028660	25587706	25585180	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
80011063	80025948	25602808	25587921	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
79965218	80010387	25648619	25603445	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
79954398	79964263	25659576	25649560	NC_000014.9	scaffold_0	98.94		True
fake: scaffold gap size wrong estimation (local)
79936966	79952052	25676539	25661460	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
79906549	79933960	25707063	25679647	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
79897941	79906187	25715579	25707340	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
79884833	79897570	25728649	25715910	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
79880570	79884615	25732794	25728751	NC_000014.9	scaffold_0	99.48		True
fake: scaffold gap size wrong estimation (local)
79875588	79880133	25737710	25733165	NC_000014.9	scaffold_0	99.74		True
indel: indel (> 5bp)
79870670	79875522	25742595	25737744	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
79808283	79870051	25804798	25743245	NC_000014.9	scaffold_0	99.45		True
indel: indel (> 5bp)
79773303	79808255	25839903	25804881	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
79754545	79767884	25858822	25845485	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
79741802	79751149	25871872	25862518	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
79739661	79741645	25874006	25872060	NC_000014.9	scaffold_0	97.83		True
fake: not a misassembly (possible transposable element)
77810549	77811749	25874007	25875207	NC_000014.9	scaffold_0	99.92		True
fake: not a misassembly (possible transposable element)
79593632	79739598	26021471	25875263	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
79537876	79593402	26077336	26021605	NC_000014.9	scaffold_0	99.56		True
fake: scaffold gap size wrong estimation (local)
79470962	79537439	26144192	26077712	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
79441623	79470872	26173539	26144261	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
79398965	79441397	26216155	26173722	NC_000014.9	scaffold_0	99.96		True
fake: not a misassembly (possible transposable element)
31732674	31733271	26216156	26216753	NC_000014.9	scaffold_0	99.54		True
fake: not a misassembly (possible transposable element)
79387896	79399012	26227869	26216755	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
79365727	79386798	26249925	26228871	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
79314820	79365562	26300848	26250103	NC_000014.9	scaffold_0	99.96		True
fake: not a misassembly (possible transposable element)
81444255	81445366	26305932	26307043	NC_000014.9	scaffold_0	100.0		True
fake: not a misassembly (possible transposable element)
79281586	79308903	26334266	26307044	NC_000014.9	scaffold_0	99.64		True
fake: scaffold gap size wrong estimation (local)
79273367	79281021	26342461	26334810	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
79257536	79272994	26358167	26342711	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
79189275	79257370	26427602	26359531	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
79175016	79189019	26441715	26427815	NC_000014.9	scaffold_0	99.17		True
fake: scaffold gap size wrong estimation (local)
79131397	79174498	26485334	26442238	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
79020468	79126324	26595937	26490153	NC_000014.9	scaffold_0	99.68		True
fake: scaffold gap size wrong estimation (local)
78939050	79020160	26677148	26596103	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
78926997	78938862	26689149	26677284	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
78912185	78926645	26703936	26689477	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
78880240	78912027	26735807	26704052	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
78569037	78880034	27047617	26736014	NC_000014.9	scaffold_0	99.65		True
indel: indel (<= 5bp)
78532444	78568984	27084231	27047671	NC_000014.9	scaffold_0	99.97		True
indel: indel (<= 5bp)
78523820	78532418	27092859	27084261	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
78504001	78523582	27112641	27093084	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
78399048	78502572	27217467	27113957	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
78259123	78398026	27356952	27218428	NC_000014.9	scaffold_0	99.64		True
fake: scaffold gap size wrong estimation (local)
78225987	78258436	27390014	27357610	NC_000014.9	scaffold_0	99.19		True
fake: scaffold gap size wrong estimation (local)
78173808	78224197	27442028	27391635	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
78110148	78173724	27505822	27442176	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
78106891	78107813	27508563	27507641	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
78075541	78104595	27539641	27510601	NC_000014.9	scaffold_0	99.63		True
fake: scaffold gap size wrong estimation (local)
77994275	78075421	27620898	27539782	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
77921394	77993273	27693758	27621864	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
77901056	77921183	27714056	27693930	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
77853594	77899925	27761417	27715098	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
77837434	77852881	27777839	27762251	NC_000014.9	scaffold_0	98.5		True
fake: scaffold gap size wrong estimation (local)
77827046	77837113	27788251	27778182	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
77824918	77826890	27790379	27788408	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
77811751	77823350	27803533	27791935	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
77807267	77809308	27807628	27805587	NC_000014.9	scaffold_0	99.85		True
local misassembly
77805984	77807266	27809172	27807890	NC_000014.9	scaffold_0	99.3		True
fake: scaffold gap size wrong estimation (local)
77797503	77805034	27817720	27810186	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
77795402	77796732	27820082	27818752	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
77792852	77794451	27822772	27821173	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
77783828	77792081	27832009	27823752	NC_000014.9	scaffold_0	99.65		True
fake: scaffold gap size wrong estimation (local)
77782300	77783424	27833425	27832300	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
77773142	77781501	27842683	27834324	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
77754240	77771985	27861465	27843728	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
77750319	77753811	27865333	27861841	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
77747787	77749619	27867903	27866071	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
77740136	77747178	27875590	27868552	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
77716599	77739929	27899047	27875702	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
77713082	77716098	27902587	27899571	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
77693930	77711885	27921564	27903610	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
77688863	77693130	27926587	27922314	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
77671407	77687636	27943987	27927756	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
77662109	77671160	27953288	27944239	NC_000014.9	scaffold_0	99.5		True
fake: scaffold gap size wrong estimation (local)
77583254	77661237	28032053	27954125	NC_000014.9	scaffold_0	99.68		True
fake: scaffold gap size wrong estimation (local)
77580564	77582978	28034714	28032301	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
77572300	77580474	28042990	28034824	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
77570225	77571203	28045018	28044040	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
77567834	77569588	28047733	28045979	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
77492518	77567431	28122505	28048181	NC_000014.9	scaffold_0	98.84		True
fake: scaffold gap size wrong estimation (local)
77479597	77491732	28135432	28123277	NC_000014.9	scaffold_0	99.59		True
fake: scaffold gap size wrong estimation (local)
77471209	77479346	28143864	28135713	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
77468564	77470216	28146463	28144803	NC_000014.9	scaffold_0	99.34		True
fake: scaffold gap size wrong estimation (local)
77464223	77467551	28150797	28147468	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
77454778	77463175	28160242	28151846	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
77419449	77454452	28195494	28160500	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
77416833	77419319	28198062	28195577	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
77414939	77416455	28200024	28198512	NC_000014.9	scaffold_0	98.69		True
fake: scaffold gap size wrong estimation (local)
77396256	77414149	28218864	28200965	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
77391443	77395012	28223621	28220052	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
77373006	77391342	28242069	28223741	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
77362088	77372907	28252971	28242158	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
77250546	77361913	28364579	28253152	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
77236383	77250371	28378679	28364735	NC_000014.9	scaffold_0	99.61		True
fake: scaffold gap size wrong estimation (local)
77230183	77235509	28384652	28379327	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
77221296	77227614	28393324	28387007	NC_000014.9	scaffold_0	99.67		True
fake: scaffold gap size wrong estimation (local)
77215669	77220762	28398880	28393783	NC_000014.9	scaffold_0	99.63		True
fake: scaffold gap size wrong estimation (local)
77166228	77215530	28448306	28399046	NC_000014.9	scaffold_0	99.64		True
fake: scaffold gap size wrong estimation (local)
77084319	77166081	28530269	28448462	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
77049077	77084067	28565648	28530509	NC_000014.9	scaffold_0	99.64		True
fake: scaffold gap size wrong estimation (local)
77027533	77048714	28587128	28565932	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
77020247	77027234	28594419	28587449	NC_000014.9	scaffold_0	99.63		True
fake: scaffold gap size wrong estimation (local)
76994862	77018528	28619802	28596142	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
76991903	76993420	28622646	28621129	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
76989134	76991052	28625484	28623564	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
76987553	76988774	28627266	28626045	NC_000014.9	scaffold_0	99.67		True
fake: scaffold gap size wrong estimation (local)
76970226	76987154	28644744	28627806	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
76908702	76969986	28706195	28644943	NC_000014.9	scaffold_0	99.68		True
fake: scaffold gap size wrong estimation (local)
76906575	76908327	28708415	28706663	NC_000014.9	scaffold_0	99.66		True
fake: scaffold gap size wrong estimation (local)
76898190	76906410	28716783	28708563	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
76872085	76897933	28742809	28716975	NC_000014.9	scaffold_0	99.82		True
indel: indel (> 5bp)
76867221	76872026	28747697	28742929	NC_000014.9	scaffold_0	99.08		True
fake: scaffold gap size wrong estimation (local)
76841188	76866963	28773770	28747993	NC_000014.9	scaffold_0	99.56		True
fake: scaffold gap size wrong estimation (local)
76822753	76840656	28792141	28774237	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
76799506	76821233	28815377	28793660	NC_000014.9	scaffold_0	99.94		True
indel: indel (> 5bp)
76755467	76799428	28859391	28815463	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
76752002	76755240	28862928	28859690	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
76714937	76732203	28898428	28881219	NC_000014.9	scaffold_0	99.29		True
fake: scaffold gap size wrong estimation (local)
76712912	76714776	28900457	28898593	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
76609816	76712785	29003523	28900566	NC_000014.9	scaffold_0	99.7		True
fake: scaffold gap size wrong estimation (local)
76564881	76608987	29048668	29004314	NC_000014.9	scaffold_0	99.04		True
fake: scaffold gap size wrong estimation (local)
76535572	76564756	29078023	29048863	NC_000014.9	scaffold_0	99.67		True
fake: scaffold gap size wrong estimation (local)
76458846	76534703	29154761	29078889	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
76448503	76458470	29165096	29155122	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
76445917	76448356	29167702	29165259	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
76414175	76445798	29199441	29167828	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
76333376	76413920	29280198	29199693	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
76299681	76332460	29313784	29281018	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
76235270	76299473	29378093	29313985	NC_000014.9	scaffold_0	99.76		True
fake: not a misassembly (possible transposable element)
22810057	22810851	29378889	29378095	NC_000014.9	scaffold_0	99.75		True
fake: not a misassembly (possible transposable element)
76062949	76235184	29551093	29378890	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
76060535	76062811	29553567	29551294	NC_000014.9	scaffold_0	99.6		True
fake: scaffold gap size wrong estimation (local)
76000376	76060353	29613764	29553782	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
75926172	75999231	29687900	29614817	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
75616027	75922243	29997550	29691251	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
75582531	75615858	30030759	29997712	NC_000014.9	scaffold_0	99.12		True
fake: scaffold gap size wrong estimation (local)
75545404	75581596	30067771	30031565	NC_000014.9	scaffold_0	99.51		True
fake: scaffold gap size wrong estimation (local)
75428379	75544541	30184346	30068538	NC_000014.9	scaffold_0	99.53		True
fake: scaffold gap size wrong estimation (local)
75358836	75428091	30253922	30184628	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
75309522	75357763	30303156	30254898	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
75306736	75308823	30305900	30303813	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
75304186	75305742	30308481	30306924	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
75298054	75302687	30314504	30309827	NC_000014.9	scaffold_0	99.55		True
indel: indel (<= 5bp)
75271303	75297870	30341246	30314686	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
75236340	75270523	30376145	30341901	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
75219245	75234992	30393453	30377481	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
75211706	75218872	30400990	30393824	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
75210598	75211591	30402101	30401108	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
75192462	75209371	30420279	30403371	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
75164595	75190928	30448023	30421696	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
75040453	75163553	30572082	30449004	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
74996119	75039861	30616711	30572614	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
74874414	74994906	30738130	30617639	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
74868563	74874269	30743975	30738271	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
74797158	74868322	30815316	30744175	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
74770072	74796945	30842368	30815499	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
74766885	74769260	30845503	30843128	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
74746591	74766568	30865870	30845790	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
74729952	74744323	30882207	30867831	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
74690267	74726617	30922871	30886503	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
74633320	74689591	30981244	30923554	NC_000014.9	scaffold_0	97.55		True
fake: scaffold gap size wrong estimation (local)
74631994	74633022	30982526	30981498	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
74626758	74631776	30987951	30982779	NC_000014.9	scaffold_0	98.1		True
fake: scaffold gap size wrong estimation (local)
74608803	74626244	31005855	30988425	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
74572327	74608050	31042240	31006522	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
74564382	74571973	31050090	31042498	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
74556609	74564033	31057871	31050449	NC_000014.9	scaffold_0	99.8		True
indel: stretch of mismatches
74543557	74556608	31070921	31057872	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
74540947	74543294	31073521	31071174	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
74477119	74540681	31137465	31073895	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
74440690	74476961	31174919	31137657	NC_000014.9	scaffold_0	99.86		True
indel: indel (> 5bp)
74435086	74440536	31180459	31175009	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
74426243	74434935	31189257	31180562	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
74385503	74425979	31229822	31189475	NC_000014.9	scaffold_0	99.67		True
fake: scaffold gap size wrong estimation (local)
74381648	74385166	31233848	31230322	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
74372964	74381412	31242628	31234180	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
74345364	74372549	31270284	31243102	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
74340802	74344413	31274717	31271086	NC_000014.9	scaffold_0	99.37		True
fake: scaffold gap size wrong estimation (local)
74331585	74340092	31284017	31275337	NC_000014.9	scaffold_0	98.22		True
fake: scaffold gap size wrong estimation (local)
74329618	74331002	31285865	31284482	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
74306163	74329523	31308997	31285947	NC_000014.9	scaffold_0	98.48		True
fake: scaffold gap size wrong estimation (local)
74257717	74305426	31357492	31309784	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
74254361	74256690	31360742	31358413	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
74253049	74254271	31362189	31360967	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
74251578	74252407	31363857	31363028	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
74249438	74250995	31366301	31364745	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
74245009	74248546	31370984	31367446	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
74231672	74244160	31384151	31371715	NC_000014.9	scaffold_0	99.57		True
fake: scaffold gap size wrong estimation (local)
74185525	74231377	31430455	31384584	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
74183158	74185332	31432772	31430598	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
74180502	74182625	31435387	31433266	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
74175714	74179516	31440068	31436266	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
74159408	74175576	31456405	31440228	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
74137710	74158504	31478026	31457230	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
74125894	74137169	31489884	31478590	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
74119175	74125184	31496460	31490449	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
74101651	74118952	31514227	31496726	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
74094338	74100623	31521472	31515181	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
74091775	74093332	31524030	31522473	NC_000014.9	scaffold_0	100.0		True
local misassembly
74093248	74094273	31525056	31524032	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
74087414	74091537	31530844	31526720	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
74080369	74087108	31537866	31531128	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
74076599	74079442	31541598	31538755	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
74069788	74075579	31548369	31542578	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
74063328	74069118	31554764	31548974	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
74061425	74063203	31556646	31554868	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
74059495	74061081	31558766	31557180	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
74056215	74058596	31562018	31559637	NC_000014.9	scaffold_0	99.83		True
local misassembly
74055212	74056214	31563671	31562669	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
74043571	74053948	31574592	31564209	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
74037957	74043207	31580146	31574898	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
74035414	74036629	31582137	31580924	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
74032728	74035289	31585170	31582609	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
74006451	74032458	31611490	31585367	NC_000014.9	scaffold_0	99.45		True
fake: scaffold gap size wrong estimation (local)
74001673	74006144	31616314	31611843	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
73980092	74001283	31637948	31616733	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
73867110	73979751	31751071	31638221	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
73858440	73866887	31759702	31751255	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
73838016	73857731	31780269	31760398	NC_000014.9	scaffold_0	99.12		True
fake: scaffold gap size wrong estimation (local)
73835037	73837901	31783278	31780434	NC_000014.9	scaffold_0	99.27		True
fake: scaffold gap size wrong estimation (local)
73831281	73834887	31787037	31783435	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
73828051	73830429	31790275	31787866	NC_000014.9	scaffold_0	98.67		True
fake: scaffold gap size wrong estimation (local)
73825027	73826461	31793093	31791659	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
73822387	73824095	31795816	31794108	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
73816500	73821698	31801837	31796643	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
73810363	73815537	31807921	31802749	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
73806397	73810148	31812023	31808273	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
73794934	73806244	31823554	31812246	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
73781735	73794813	31836783	31823705	NC_000014.9	scaffold_0	99.89		True
indel: indel (<= 5bp)
73779738	73781734	31838783	31836787	NC_000014.9	scaffold_0	99.8		True
local misassembly
73772795	73774037	31840026	31838784	NC_000014.9	scaffold_0	100.0		True
indel: indel (<= 5bp)
73769915	73772794	31842910	31840031	NC_000014.9	scaffold_0	99.9		True
indel: indel (<= 5bp)
73768567	73769913	31844257	31842911	NC_000014.9	scaffold_0	95.77		True
indel: indel (> 5bp)
73766852	73768525	31845931	31844258	NC_000014.9	scaffold_0	99.88		True
indel: indel (<= 5bp)
73764341	73766851	31848446	31845936	NC_000014.9	scaffold_0	99.92		True
indel: indel (<= 5bp)
73760139	73764339	31852647	31848447	NC_000014.9	scaffold_0	100.0		True
indel: indel (<= 5bp)
73757280	73760137	31855505	31852648	NC_000014.9	scaffold_0	99.97		True
indel: indel (> 5bp)
73756296	73757279	31856499	31855516	NC_000014.9	scaffold_0	100.0		True
indel: indel (> 5bp)
73749373	73756295	31863434	31856512	NC_000014.9	scaffold_0	99.94		True
indel: indel (<= 5bp)
73748771	73749303	31864035	31863503	NC_000014.9	scaffold_0	99.81		True
indel: indel (<= 5bp)
73737775	73748768	31875029	31864036	NC_000014.9	scaffold_0	99.89		True
indel: indel (<= 5bp)
73736633	73737773	31876170	31875030	NC_000014.9	scaffold_0	99.82		True
indel: indel (<= 5bp)
73732807	73736632	31879997	31876172	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
73720274	73732355	31892498	31880417	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
73708561	73719843	31904482	31893203	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
73682370	73705892	31930887	31906639	NC_000014.9	scaffold_0	96.83		True
fake: scaffold gap size wrong estimation (local)
73677837	73681604	31935344	31931567	NC_000014.9	scaffold_0	99.68		True
fake: scaffold gap size wrong estimation (local)
73629345	73676984	31983961	31936116	NC_000014.9	scaffold_0	99.46		True
fake: scaffold gap size wrong estimation (local)
73615134	73628683	31998137	31984593	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
73612506	73614000	32000754	31999260	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
73610530	73612305	32002937	32001162	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
73605795	73609994	32007718	32003523	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
73598391	73605583	32015057	32007871	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
73586629	73597608	32026683	32015717	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
73571005	73572070	32041887	32040822	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
73560818	73569603	32052033	32043248	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
73558907	73560519	32054031	32052419	NC_000014.9	scaffold_0	99.94		True
relocation, inconsistency = 25506
73531817	73533399	32055615	32054033	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
73524334	73530809	32063255	32056789	NC_000014.9	scaffold_0	99.61		True
fake: scaffold gap size wrong estimation (local)
73509906	73524148	32077190	32063433	NC_000014.9	scaffold_0	96.54		True
fake: scaffold gap size wrong estimation (local)
73474443	73508918	32112441	32078249	NC_000014.9	scaffold_0	98.31		True
fake: scaffold gap size wrong estimation (local)
73454223	73474151	32132621	32112704	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
73414824	73453623	32172126	32133101	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
73406709	73413971	32180244	32172983	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
73401709	73405436	32185142	32181414	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
73395203	73401586	32191638	32185253	NC_000014.9	scaffold_0	99.89		True
indel: indel (> 5bp)
73390857	73395090	32196004	32191771	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
73389108	73390669	32197758	32196195	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
73385497	73387034	32201212	32199682	NC_000014.9	scaffold_0	99.41		True
fake: scaffold gap size wrong estimation (local)
73372391	73384971	32214296	32201701	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
73367775	73372169	32218926	32214537	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
73353585	73367321	32233037	32219285	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
73307996	73351774	32278645	32234789	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
73302850	73307749	32283797	32278897	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
73294953	73302421	32291672	32284207	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
73248099	73294873	32339543	32292790	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
73218093	73247658	32369747	32340182	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
73202613	73217814	32385109	32370002	NC_000014.9	scaffold_0	99.38		True
fake: scaffold gap size wrong estimation (local)
73185470	73202417	32402249	32385306	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
73153741	73183449	32434046	32404109	NC_000014.9	scaffold_0	99.23		True
fake: scaffold gap size wrong estimation (local)
73150783	73151887	32436845	32435741	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
73144049	73150534	32443589	32437103	NC_000014.9	scaffold_0	99.98		True
local misassembly
73140275	73144000	32447476	32443752	NC_000014.9	scaffold_0	99.95		True
indel: indel (<= 5bp)
73138839	73140227	32448913	32447525	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
73069830	73138287	32518070	32449433	NC_000014.9	scaffold_0	99.68		True
indel: indel (<= 5bp)
73055909	73069774	32531994	32518124	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
73051233	73055720	32536611	32532127	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
73049458	73051065	32538383	32536772	NC_000014.9	scaffold_0	99.63		True
fake: scaffold gap size wrong estimation (local)
73042851	73049282	32545198	32538615	NC_000014.9	scaffold_0	97.69		True
fake: scaffold gap size wrong estimation (local)
73036564	73042236	32551361	32545643	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
73032237	73036024	32555727	32551940	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
73023434	73032046	32564464	32555854	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
73015442	73023166	32572357	32564632	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
73011229	73015295	32576521	32572455	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
73003060	73010759	32584545	32576847	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
72953827	73002789	32633688	32584726	NC_000014.9	scaffold_0	99.68		True
fake: scaffold gap size wrong estimation (local)
72953018	72953715	32634773	32634076	NC_000014.9	scaffold_0	100.0		True
local misassembly
72935644	72952709	32651799	32634774	NC_000014.9	scaffold_0	99.58		True
fake: scaffold gap size wrong estimation (local)
72927555	72935196	32659935	32652290	NC_000014.9	scaffold_0	99.52		True
fake: scaffold gap size wrong estimation (local)
72925009	72926718	32662457	32660748	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
72915426	72923410	32671906	32663915	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
72912927	72915234	32674413	32672105	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
72885036	72912824	32702366	32674532	NC_000014.9	scaffold_0	99.63		True
fake: scaffold gap size wrong estimation (local)
72873321	72884942	32714080	32702463	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
72846476	72872688	32740791	32714606	NC_000014.9	scaffold_0	99.44		True
fake: scaffold gap size wrong estimation (local)
72805207	72846334	32781970	32740924	NC_000014.9	scaffold_0	99.56		True
fake: scaffold gap size wrong estimation (local)
72769679	72805068	32817637	32782254	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
72719070	72769482	32868257	32817825	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
72599638	72718785	32988029	32868538	NC_000014.9	scaffold_0	99.57		True
fake: scaffold gap size wrong estimation (local)
72414061	72599421	33173952	32988255	NC_000014.9	scaffold_0	99.54		True
fake: scaffold gap size wrong estimation (local)
72360495	72395647	33228193	33193048	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
72348170	72360303	33240454	33228327	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
72345818	72347247	33242782	33241353	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
72342802	72344775	33245796	33243823	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
72324869	72341374	33263628	33247124	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
72295291	72323814	33293180	33264639	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
72259890	72295101	33328650	33293445	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
72250091	72259757	33338446	33328779	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
72241217	72249922	33347360	33338561	NC_000014.9	scaffold_0	98.87		True
fake: scaffold gap size wrong estimation (local)
72234594	72240271	33354027	33348349	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
72232075	72234345	33356560	33354290	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
72229918	72230578	33359724	33359064	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
72224900	72227665	33364503	33361738	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
72156458	72224024	33433138	33365327	NC_000014.9	scaffold_0	99.44		True
fake: scaffold gap size wrong estimation (local)
72138542	72156285	33450972	33433231	NC_000014.9	scaffold_0	99.95		True
indel: indel (<= 5bp)
72002606	72138474	33586893	33451041	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
71982183	72001418	33607226	33587994	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
71918185	71976350	33669576	33611345	NC_000014.9	scaffold_0	99.66		True
fake: scaffold gap size wrong estimation (local)
71888875	71918096	33699010	33669769	NC_000014.9	scaffold_0	99.68		True
fake: scaffold gap size wrong estimation (local)
71876495	71888382	33711408	33699523	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
71849006	71874195	33738426	33713271	NC_000014.9	scaffold_0	99.56		True
fake: scaffold gap size wrong estimation (local)
71808625	71843113	33779113	33744637	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
71805672	71807638	33782119	33780154	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
71791248	71805505	33796901	33782476	NC_000014.9	scaffold_0	98.59		True
indel: indel (> 5bp)
71753992	71791201	33834148	33797000	NC_000014.9	scaffold_0	99.65		True
fake: scaffold gap size wrong estimation (local)
71679833	71753846	33908281	33834294	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
71627395	71678416	33960448	33909596	NC_000014.9	scaffold_0	99.64		True
indel: indel (> 5bp)
71544296	71627169	34043455	33960657	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
71496073	71543920	34091557	34043701	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
71417478	71495895	34170488	34091684	NC_000014.9	scaffold_0	99.4		True
fake: scaffold gap size wrong estimation (local)
71373661	71417374	34214246	34170583	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
71370323	71373138	34217577	34214762	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
71326409	71368155	34261567	34219574	NC_000014.9	scaffold_0	99.24		True
fake: scaffold gap size wrong estimation (local)
71271981	71326270	34315897	34261673	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
71263595	71271876	34324356	34316075	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
71235646	71263246	34352280	34324695	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
71204019	71235362	34383840	34352498	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
71185030	71203869	34402819	34383986	NC_000014.9	scaffold_0	99.81		True
indel: indel (<= 5bp)
71156461	71184999	34431532	34402854	NC_000014.9	scaffold_0	99.29		True
fake: scaffold gap size wrong estimation (local)
71128019	71156085	34461034	34432011	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
71125426	71126966	34463591	34462051	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
71119932	71124420	34468952	34464464	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
71039156	71119410	34549719	34469458	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
71008657	71037037	34579952	34551569	NC_000014.9	scaffold_0	99.97		True
indel: indel (> 5bp)
70971381	71008495	34617206	34580099	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
70960829	70971154	34627652	34617323	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
70939343	70958980	34649335	34629713	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
70910208	70936477	34678703	34652434	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
70907986	70910076	34680965	34678874	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
70899989	70907519	34688937	34681402	NC_000014.9	scaffold_0	99.91		True
indel: indel (<= 5bp)
70878179	70899918	34710712	34689009	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
70875419	70876613	34713368	34712173	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
70870071	70875220	34718670	34713521	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
70842406	70869769	34746092	34718837	NC_000014.9	scaffold_0	99.49		True
fake: scaffold gap size wrong estimation (local)
70834840	70842052	34753602	34746389	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
70824504	70834449	34763854	34753925	NC_000014.9	scaffold_0	99.59		True
fake: scaffold gap size wrong estimation (local)
70819209	70824268	34769033	34763972	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
70803418	70818707	34784852	34769563	NC_000014.9	scaffold_0	99.97		True
indel: indel (<= 5bp)
70799501	70803359	34788767	34784909	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
70764172	70798566	34823994	34789625	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
70750912	70763810	34837237	34824340	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
70718216	70750503	34869839	34837566	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
70703534	70718128	34884555	34869961	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
70629164	70703380	34959030	34884661	NC_000014.9	scaffold_0	99.65		True
fake: scaffold gap size wrong estimation (local)
70612514	70628842	34975769	34959334	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
70607445	70612047	34980907	34976305	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
70606200	70607241	34982126	34981087	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
70603241	70604680	34985033	34983594	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
70553310	70603096	35035004	34985244	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
70534087	70547457	35054236	35040870	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
70507749	70533779	35080559	35054537	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
70499626	70501936	35090002	35087692	NC_000014.9	scaffold_0	100.0		True
indel: indel (<= 5bp)
70482706	70499544	35106908	35090086	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
70471161	70475240	35117342	35113262	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
70457886	70471007	35130588	35117467	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
70425059	70457354	35163332	35131040	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
70367562	70423585	35220764	35164535	NC_000014.9	scaffold_0	99.66		True
indel: indel (<= 5bp)
70312950	70367489	35275320	35220835	NC_000014.9	scaffold_0	99.67		True
fake: scaffold gap size wrong estimation (local)
70310741	70311905	35277438	35276274	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
70255391	70305364	35332083	35282128	NC_000014.9	scaffold_0	99.69		True
fake: scaffold gap size wrong estimation (local)
70252699	70254694	35334751	35332756	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
70248496	70251784	35338942	35335656	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
70204976	70246013	35381950	35340947	NC_000014.9	scaffold_0	99.69		True
fake: scaffold gap size wrong estimation (local)
70198490	70204849	35388677	35382308	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
70161189	70198212	35425856	35388898	NC_000014.9	scaffold_0	99.67		True
indel: indel (> 5bp)
70087175	70161047	35499825	35425940	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
69830956	70086416	35755865	35500533	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
69829189	69830095	35757699	35756793	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
69827609	69828880	35759532	35758261	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
69817844	69827361	35769276	35759756	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
69809992	69817176	35777111	35769927	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
69791554	69809868	35795550	35777225	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
69765444	69791283	35821591	35795745	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
69763785	69765293	35823302	35821796	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
69761918	69763367	35825325	35823876	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
69744338	69761509	35843329	35825877	NC_000014.9	scaffold_0	99.31		True
fake: scaffold gap size wrong estimation (local)
69721657	69743960	35866040	35843673	NC_000014.9	scaffold_0	99.88		True
indel: indel (<= 5bp)
69667551	69721605	35920155	35866090	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
69646877	69667388	35940818	35920307	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
69604240	69646719	35983388	35940924	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
69412064	69603949	36175544	35983665	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
69285133	69411222	36302525	36176348	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
69222039	69284922	36365808	36302921	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
69220384	69221916	36367515	36365983	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
69219182	69220259	36368741	36367664	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
69213538	69218120	36374344	36369761	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
69099262	69212722	36488677	36375106	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
69028659	69098733	36559279	36489184	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
69026074	69028043	36561805	36559835	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
69017866	69025779	36570563	36562425	NC_000014.9	scaffold_0	97.22		True
fake: scaffold gap size wrong estimation (local)
69009391	69017181	36578931	36571133	NC_000014.9	scaffold_0	99.85		True
indel: indel (<= 5bp)
69008336	69009339	36579982	36578979	NC_000014.9	scaffold_0	99.9		True
indel: indel (> 5bp)
68950720	69008275	36637582	36580027	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
68907357	68949943	36680941	36638356	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
68830991	68907266	36759247	36681043	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
68828406	68829516	36761851	36760741	NC_000014.9	scaffold_0	99.91		True
local misassembly
68829951	68830989	36762904	36761866	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
68819102	68828371	36773737	36764465	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
68798375	68818998	36794484	36773873	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
68777317	68797858	36815386	36794844	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
68719363	68777222	36873451	36815577	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
68648675	68718867	36944139	36873940	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
68515950	68648021	37077013	36944736	NC_000014.9	scaffold_0	99.61		True
fake: scaffold gap size wrong estimation (local)
68457821	68515669	37135082	37077257	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
68433306	68456890	37159490	37135920	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
68356983	68428714	37235564	37163804	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
68335315	68356843	37257209	37235687	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
68235707	68334910	37356825	37257562	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
68120202	68235556	37471688	37357035	NC_000014.9	scaffold_0	99.28		True
fake: scaffold gap size wrong estimation (local)
68115455	68119399	37476386	37472442	NC_000014.9	scaffold_0	100.0		True
fake: not a misassembly (possible transposable element)
83221591	83227160	37481958	37476388	NC_000014.9	scaffold_0	99.83		True
fake: not a misassembly (possible transposable element)
68093616	68115143	37503485	37481959	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
68088036	68090946	37508626	37505716	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
67874016	68087832	37722451	37508788	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
67829411	67868302	37767069	37728187	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
67827207	67829119	37769301	37767388	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
67819579	67826699	37777050	37769931	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
67708995	67819419	37887519	37777133	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
67701442	67708766	37895108	37887784	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
67677429	67700617	37919440	37895796	NC_000014.9	scaffold_0	97.94		True
indel: stretch of mismatches
67674569	67677391	37922300	37919478	NC_000014.9	scaffold_0	99.96		True
indel: indel (<= 5bp)
67645097	67674531	37952518	37922340	NC_000014.9	scaffold_0	97.75		True
fake: scaffold gap size wrong estimation (local)
67595137	67645015	38002612	37952632	NC_000014.9	scaffold_0	99.58		True
fake: scaffold gap size wrong estimation (local)
67531735	67595034	38065977	38002676	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
67445582	67531331	38152281	38066372	NC_000014.9	scaffold_0	99.44		True
fake: scaffold gap size wrong estimation (local)
67399676	67444821	38198148	38152993	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
67341907	67398559	38255915	38199259	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
67328992	67341402	38268664	38256293	NC_000014.9	scaffold_0	99.67		True
fake: scaffold gap size wrong estimation (local)
67278128	67327991	38319431	38269642	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
67274963	67277990	38322587	38319560	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
67214904	67274210	38382621	38323315	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
67150454	67212592	38446561	38384493	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
67135024	67150231	38462002	38446817	NC_000014.9	scaffold_0	99.84		True
indel: indel (<= 5bp)
67095967	67134979	38501055	38462042	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
67087039	67095407	38509982	38501616	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
66957200	67086467	38639813	38510492	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
66837474	66956516	38759453	38640423	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
66778235	66834644	38819539	38763128	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
66763449	66777241	38834212	38820426	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
66686103	66763329	38911536	38834313	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
66683819	66685947	38913769	38911641	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
66623686	66683323	38974090	38914457	NC_000014.9	scaffold_0	99.99		True
indel: indel (<= 5bp)
66586034	66623637	39011742	38974138	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
66561106	66582585	39038226	39016749	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
66546402	66559087	39052633	39039940	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
66474622	66544721	39124221	39054143	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
66397782	66474366	39200904	39124329	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
66344171	66396672	39254392	39201889	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
66302626	66343417	39295964	39255170	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
66290547	66302111	39308032	39296468	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
66204935	66289614	39393506	39308832	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
66188320	66202028	39410511	39396801	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
66184806	66186708	39413988	39412086	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
66086370	66184265	39512409	39414503	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
66062784	66086194	39536478	39512549	NC_000014.9	scaffold_0	97.81		True
fake: scaffold gap size wrong estimation (local)
66031505	66061869	39567724	39537341	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
65982982	66027056	39616821	39572742	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
65897411	65982283	39702557	39617494	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
65862276	65897115	39737783	39702931	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
65860005	65861752	39740059	39738312	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
65817808	65855078	39781997	39744711	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
65717579	65817567	39883538	39782154	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
65694850	65716889	39906538	39884147	NC_000014.9	scaffold_0	98.42		True
fake: scaffold gap size wrong estimation (local)
65693335	65694636	39908127	39906826	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
65634562	65692087	39966808	39909290	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
65587168	65633152	40013991	39968119	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
65527035	65587056	40074102	40014096	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
65523798	65525618	40077243	40075423	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
65505513	65523079	40095599	40077952	NC_000014.9	scaffold_0	99.54		True
fake: scaffold gap size wrong estimation (local)
65431175	65505325	40169795	40095708	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
65363348	65431010	40237747	40170004	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
65317783	65362879	40283156	40238083	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
65267285	65317577	40333730	40283440	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
65247220	65266396	40353952	40334580	NC_000014.9	scaffold_0	98.98		True
fake: not a misassembly (possible transposable element)
73152505	73153729	40355178	40353954	NC_000014.9	scaffold_0	100.0		True
fake: not a misassembly (possible transposable element)
65170340	65247271	40431910	40355179	NC_000014.9	scaffold_0	99.41		True
fake: scaffold gap size wrong estimation (local)
65157929	65169889	40444355	40432378	NC_000014.9	scaffold_0	99.69		True
fake: scaffold gap size wrong estimation (local)
65152663	65157285	40449566	40444951	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
65120361	65152034	40481908	40450283	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
65109540	65119373	40492668	40482834	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
65108663	65109446	40493576	40492793	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
65060871	65108483	40541481	40493815	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
65051987	65060585	40550389	40541791	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
65043836	65051810	40558525	40550552	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
64979401	65043748	40622997	40558605	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
64972342	64978763	40630050	40623637	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
64922686	64972151	40679829	40630370	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
64909369	64922390	40693175	40680055	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
64908463	64909522	40694624	40693565	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
64905375	64907149	40697714	40695940	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
64901809	64904939	40701517	40698243	NC_000014.9	scaffold_0	97.41		True
fake: scaffold gap size wrong estimation (local)
64898895	64901018	40704427	40702304	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
64896898	64898488	40706471	40704881	NC_000014.9	scaffold_0	99.94		True
local misassembly
64890825	64894149	40709808	40706489	NC_000014.9	scaffold_0	99.7		True
fake: scaffold gap size wrong estimation (local)
64667428	64889878	40933233	40710753	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
64664725	64667319	40935949	40933357	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
64658632	64664280	40942027	40936382	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
64633122	64657377	40967444	40943189	NC_000014.9	scaffold_0	99.68		True
fake: scaffold gap size wrong estimation (local)
64584158	64632921	41016400	40967662	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
64414378	64583814	41186502	41016751	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
64397248	64414175	41203742	41186630	NC_000014.9	scaffold_0	98.8		True
fake: scaffold gap size wrong estimation (local)
64380744	64396578	41220196	41204357	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
64378355	64380094	41222630	41220891	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
64374126	64378047	41226995	41223095	NC_000014.9	scaffold_0	99.31		True
fake: scaffold gap size wrong estimation (local)
64371220	64373645	41229974	41227547	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
64359415	64370854	41241714	41230276	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
64353261	64358995	41247831	41242100	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
64336062	64351777	41264966	41249250	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
64328371	64335864	41272653	41265167	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
64313589	64327739	41287362	41273215	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
64311642	64313308	41289383	41287717	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
64267885	64311480	41333069	41289579	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
64183542	64267667	41417273	41333259	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
64151513	64182534	41449250	41418225	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
64145509	64151414	41455249	41449344	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
64100863	64144943	41499846	41455768	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
64094267	64100042	41506415	41500640	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
64037988	64094138	41562635	41506504	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
63944825	64037264	41656033	41563584	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
63827681	63944521	41773264	41656349	NC_000014.9	scaffold_0	99.55		True
indel: indel (<= 5bp)
63815307	63827387	41785655	41773563	NC_000014.9	scaffold_0	99.65		True
fake: scaffold gap size wrong estimation (local)
63807867	63814446	41793122	41786541	NC_000014.9	scaffold_0	99.68		True
fake: scaffold gap size wrong estimation (local)
63805643	63807775	41795350	41793218	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
63802193	63805528	41798953	41795618	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
63799409	63802199	41807398	41804608	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
63771171	63799187	41835544	41807548	NC_000014.9	scaffold_0	99.65		True
indel: indel (> 5bp)
63752308	63771080	41854397	41835627	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
63728208	63751092	41878718	41855670	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
63680185	63728102	41926615	41878801	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
63562441	63679950	42044264	41926791	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
63551098	63561165	42055622	42045566	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
63523498	63550772	42083166	42055904	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
63520272	63522077	42086311	42084512	NC_000014.9	scaffold_0	99.67		True
indel: indel (<= 5bp)
63463818	63520216	42142754	42086368	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
63422730	63462865	42183844	42143708	NC_000014.9	scaffold_0	99.93		True
local misassembly
63421070	63422697	42185650	42184023	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
63320779	63420911	42285998	42185872	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
63259847	63320622	42346852	42286157	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
63222673	63259663	42384158	42347076	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
63220452	63221984	42386428	42384896	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
63217606	63219747	42389284	42387143	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
63166491	63216956	42440274	42389816	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
63162575	63164842	42444090	42441823	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
63155096	63162398	42451622	42444328	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
63153094	63154640	42453486	42451939	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
63145929	63152850	42460741	42453820	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
63143605	63145388	42463209	42461426	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
63136592	63138198	42469631	42468025	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
63122569	63136240	42483709	42470037	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
63003617	63116718	42601231	42488080	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
62999795	63003471	42604993	42601317	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
62962215	62999221	42642464	42605471	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
62949255	62961923	42655505	42642839	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
62909487	62948033	42695199	42656660	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
62878022	62909036	42726569	42695589	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
62875280	62877162	42729194	42727312	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
62847140	62874623	42757274	42729794	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
62817292	62847000	42787105	42757383	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
62799860	62817053	42804460	42787268	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
62709101	62799590	42895411	42804637	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
62642555	62709015	42962141	42895506	NC_000014.9	scaffold_0	99.64		True
fake: scaffold gap size wrong estimation (local)
62633452	62636277	42970892	42968059	NC_000014.9	scaffold_0	99.29		True
fake: scaffold gap size wrong estimation (local)
62623718	62632844	42980578	42971451	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
62619344	62622967	42984931	42981308	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
62617163	62618718	42987210	42985655	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
62614807	62616029	42989613	42988391	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
62611102	62613787	42993485	42990800	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
62541859	62610119	43062837	42994583	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
62524128	62536023	43080306	43068405	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
62473292	62522713	43131041	43081617	NC_000014.9	scaffold_0	99.86		True
indel: indel (<= 5bp)
62394529	62473259	43209806	43131072	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
62384037	62394301	43220340	43210109	NC_000014.9	scaffold_0	99.58		True
fake: scaffold gap size wrong estimation (local)
62328863	62383988	43275488	43220422	NC_000014.9	scaffold_0	99.55		True
fake: scaffold gap size wrong estimation (local)
62306707	62327292	43297483	43276944	NC_000014.9	scaffold_0	99.63		True
fake: scaffold gap size wrong estimation (local)
62288557	62306344	43315529	43297747	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
62204346	62284675	43400049	43319728	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
62202270	62203396	43402037	43400911	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
62197958	62199255	43406574	43405277	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
62175106	62197698	43429377	43406783	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
62054361	62174175	43549949	43430156	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
62052334	62054150	43552044	43550228	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
62050112	62052020	43554316	43552408	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
62043481	62045234	43560882	43559129	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
62040820	62042247	43563499	43562072	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
62038513	62040723	43566027	43563817	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
61859101	62037721	43745661	43566870	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
61845344	61858143	43759408	43746607	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
61843067	61845044	43761760	43759783	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
61818680	61842721	43786139	43762110	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
61817029	61818527	43787807	43786309	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
61812713	61816885	43792073	43787903	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
61797272	61812631	43807542	43792193	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
61788458	61797028	43816334	43807771	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
61783693	61788263	43821119	43816549	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
61774167	61783039	43830959	43821771	NC_000014.9	scaffold_0	96.49		True
fake: scaffold gap size wrong estimation (local)
61770395	61772336	43834601	43832660	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
61767942	61769314	43836962	43835590	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
61708707	61767481	43896417	43837499	NC_000014.9	scaffold_0	99.49		True
fake: scaffold gap size wrong estimation (local)
61702523	61707648	43902538	43897403	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
61658552	61702278	43946573	43902675	NC_000014.9	scaffold_0	99.48		True
fake: scaffold gap size wrong estimation (local)
61639893	61657748	43965147	43947280	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
61618521	61639446	43986507	43965608	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
61596238	61618220	44008805	43986811	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
61488117	61595787	44116794	44009127	NC_000014.9	scaffold_0	99.75		True
indel: indel (<= 5bp)
61396084	61488013	44208826	44116897	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
61246412	61395291	44358433	44209581	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
61236716	61246260	44368129	44358569	NC_000014.9	scaffold_0	99.49		True
fake: scaffold gap size wrong estimation (local)
61210239	61236546	44394660	44368358	NC_000014.9	scaffold_0	99.86		True
indel: indel (> 5bp)
61207053	61210084	44397758	44394745	NC_000014.9	scaffold_0	99.37		True
fake: scaffold gap size wrong estimation (local)
61181464	61206864	44423216	44397951	NC_000014.9	scaffold_0	99.4		True
fake: scaffold gap size wrong estimation (local)
61173410	61180957	44431211	44423671	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
61164368	61173288	44440265	44431328	NC_000014.9	scaffold_0	99.64		True
fake: scaffold gap size wrong estimation (local)
61160453	61163779	44444154	44440822	NC_000014.9	scaffold_0	99.64		True
fake: scaffold gap size wrong estimation (local)
61138764	61160348	44465888	44444287	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
61137011	61138230	44467624	44466405	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
61134877	61136091	44470057	44468843	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
61096606	61133252	44508252	44471544	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
61094008	61095175	44510846	44509679	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
61079204	61092663	44525467	44512060	NC_000014.9	scaffold_0	99.58		True
fake: scaffold gap size wrong estimation (local)
61061046	61078803	44543656	44525914	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
61013300	61055094	44591919	44550136	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
61007139	61009671	44598337	44595780	NC_000014.9	scaffold_0	98.94		True
fake: scaffold gap size wrong estimation (local)
60943063	61005312	44662430	44600007	NC_000014.9	scaffold_0	99.63		True
fake: scaffold gap size wrong estimation (local)
60940127	60942010	44665368	44663485	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
60912557	60936899	44693918	44669616	NC_000014.9	scaffold_0	99.66		True
fake: scaffold gap size wrong estimation (local)
60702175	60887394	44906045	44720907	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
60693583	60701685	44914493	44906387	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
60626381	60692689	44981579	44915273	NC_000014.9	scaffold_0	99.71		True
fake: scaffold gap size wrong estimation (local)
60591746	60626238	45016191	44981700	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
60434933	60590010	45172892	45017856	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
60423638	60433665	45183989	45174066	NC_000014.9	scaffold_0	98.93		True
fake: scaffold gap size wrong estimation (local)
60421851	60423183	45185465	45184133	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
60384031	60421537	45223424	45185918	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
60342896	60383121	45264467	45224238	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
60255372	60340444	45351731	45266513	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
60249747	60255172	45357366	45351941	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
60186915	60249560	45420210	45357564	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
60076708	60186758	45530711	45420413	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
60067763	60076118	45539571	45531217	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
60039196	60067593	45568472	45539779	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
59995009	60038258	45612612	45569268	NC_000014.9	scaffold_0	99.57		True
fake: scaffold gap size wrong estimation (local)
59952424	59993468	45655393	45614209	NC_000014.9	scaffold_0	99.61		True
fake: scaffold gap size wrong estimation (local)
59914582	59946536	45693246	45661368	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
59894833	59913906	45712959	45693945	NC_000014.9	scaffold_0	99.69		True
fake: scaffold gap size wrong estimation (local)
59893469	59894479	45714426	45713416	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
59770964	59891283	45836521	45716229	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
59750721	59770334	45856830	45837246	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
59716994	59748228	45890283	45859063	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
59672802	59716758	45934424	45890470	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
59595103	59672648	46012149	45934595	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
59581854	59594787	46025368	46012445	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
59556920	59581781	46050344	46025494	NC_000014.9	scaffold_0	99.09		True
fake: scaffold gap size wrong estimation (local)
59524036	59551904	46082228	46054346	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
59518982	59523745	46087341	46082578	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
59499302	59513818	46106856	46092312	NC_000014.9	scaffold_0	99.53		True
fake: scaffold gap size wrong estimation (local)
59493049	59498986	46112918	46107137	NC_000014.9	scaffold_0	97.1		True
fake: scaffold gap size wrong estimation (local)
59447934	59492837	46158051	46113161	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
59446074	59447073	46159847	46158848	NC_000014.9	scaffold_0	99.6		True
fake: scaffold gap size wrong estimation (local)
59442389	59444603	46163523	46161309	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
59429877	59442225	46176048	46163702	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
59418932	59429485	46186981	46176433	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
59415379	59417203	46190178	46188354	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
59403525	59411112	46201580	46193993	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
59401355	59402446	46203805	46202714	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
59396646	59400651	46208492	46204491	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
59367158	59396231	46237897	46208809	NC_000014.9	scaffold_0	99.5		True
fake: scaffold gap size wrong estimation (local)
59322721	59366933	46282299	46238112	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
59143961	59322356	46461182	46282542	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
59141308	59142563	46463873	46462617	NC_000014.9	scaffold_0	99.92		True
local misassembly
59142565	59144116	46465573	46464022	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
59113241	59141310	46494843	46466759	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
59103496	59113062	46504521	46494948	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
59078838	59103269	46529282	46504671	NC_000014.9	scaffold_0	99.21		True
fake: scaffold gap size wrong estimation (local)
59074906	59077898	46533090	46530098	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
59059731	59074178	46548255	46533808	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
59046729	59058126	46561184	46549705	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
59002572	59046580	46605280	46561285	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
58962927	59002312	46644870	46605464	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
58684307	58962406	46923215	46645234	NC_000014.9	scaffold_0	99.76		True
indel: indel (> 5bp)
58656151	58684127	46951382	46923431	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
58614733	58655636	46992763	46951777	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
58591724	58614367	47015828	46993161	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
58589228	58591397	47018206	47016037	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
58484954	58588532	47122377	47018908	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
58404333	58484866	47203247	47122478	NC_000014.9	scaffold_0	99.57		True
fake: scaffold gap size wrong estimation (local)
58400180	58404100	47207310	47203390	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
58382785	58399898	47224614	47207516	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
58320874	58382653	47286422	47224704	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
58317086	58320617	47290214	47286695	NC_000014.9	scaffold_0	99.52		True
fake: scaffold gap size wrong estimation (local)
58262770	58316670	47344777	47290641	NC_000014.9	scaffold_0	99.41		True
fake: scaffold gap size wrong estimation (local)
58240891	58262578	47366614	47344917	NC_000014.9	scaffold_0	99.85		True
indel: indel (> 5bp)
58182228	58240808	47425223	47366667	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
58045357	58180970	47562033	47426375	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
58013878	58032702	47592730	47573904	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
58009808	58013647	47596853	47593016	NC_000014.9	scaffold_0	99.61		True
fake: scaffold gap size wrong estimation (local)
57965131	58009671	47641512	47596968	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
57745875	57964982	47860642	47641654	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
57744387	57745535	47862095	47860947	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
57695529	57744099	47910646	47862257	NC_000014.9	scaffold_0	99.29		True
fake: scaffold gap size wrong estimation (local)
57670939	57695137	47935184	47910984	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
57647131	57667704	47959509	47938949	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
57644557	57646952	47962144	47959749	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
57622684	57643835	47983834	47962739	NC_000014.9	scaffold_0	99.56		True
fake: scaffold gap size wrong estimation (local)
57599803	57620952	48006097	47985284	NC_000014.9	scaffold_0	97.88		True
fake: scaffold gap size wrong estimation (local)
57555319	57599804	48050788	48006316	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
57553179	57555228	48052984	48050935	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
57535453	57551940	48070638	48054162	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
57500343	57535202	48105677	48070807	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
57454752	57500087	48151268	48105874	NC_000014.9	scaffold_0	99.41		True
fake: scaffold gap size wrong estimation (local)
57379952	57454553	48226033	48151450	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
57343671	57379737	48262280	48226210	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
57334309	57338916	48271192	48266586	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
57311733	57333149	48293766	48272349	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
57118179	57311551	48487072	48293871	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
57057036	57101621	48548239	48503644	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
57050531	57056803	48554686	48548414	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
56989299	57050347	48615905	48554853	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
56838700	56988170	48766444	48616983	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
56782293	56838564	48823041	48766589	NC_000014.9	scaffold_0	99.7		True
fake: scaffold gap size wrong estimation (local)
56752873	56781300	48852678	48823996	NC_000014.9	scaffold_0	98.93		True
indel: indel (> 5bp)
56728930	56752789	48876561	48852727	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
56726018	56727237	48879437	48878218	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
56685918	56724735	48919584	48880739	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
56680990	56685717	48924590	48919742	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
56678997	56679940	48926358	48925415	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
56656788	56667266	48949139	48938659	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
56654823	56656404	48951209	48949628	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
56651722	56653059	48954155	48952819	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
56594238	56641814	49011672	48964092	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
56529738	56593698	49076060	49012179	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
56489749	56529423	49116052	49076400	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
56475668	56489455	49130091	49116308	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
56458902	56475478	49146818	49130251	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
56447709	56457897	49157957	49147769	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
56399301	56441828	49203141	49160614	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
56397425	56399147	49205219	49203497	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
56362965	56396111	49239717	49206411	NC_000014.9	scaffold_0	99.49		True
fake: scaffold gap size wrong estimation (local)
56355405	56362135	49247203	49240473	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
56237257	56355153	49365409	49247460	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
56229567	56230436	49373746	49372877	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
56226608	56228345	49376702	49374965	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
56223859	56225599	49379462	49377721	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
56221595	56222936	49381582	49380240	NC_000014.9	scaffold_0	99.7		True
fake: scaffold gap size wrong estimation (local)
56218729	56220155	49384443	49383017	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
56209380	56217380	49393682	49385682	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
56205073	56208964	49397970	49394081	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
56167069	56204324	49435918	49398668	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
56158401	56166784	49444560	49436174	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
56064823	56157538	49538115	49445402	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
56019521	56064492	49583315	49538435	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
56007526	56013996	49596884	49590414	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
55993089	56006783	49611266	49597572	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
55919743	55988498	49683841	49615086	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
55863420	55919404	49740064	49684093	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
55839671	55862127	49763714	49741261	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
55836545	55839345	49767036	49764238	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
55810637	55835265	49792868	49768236	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
55774009	55809235	49829282	49794056	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
55768861	55773821	49834447	49829487	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
55629421	55768714	49973921	49834740	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
55580540	55629231	50022847	49974157	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
55524688	55580168	50078655	50023307	NC_000014.9	scaffold_0	99.59		True
fake: scaffold gap size wrong estimation (local)
55496522	55524309	50106728	50078983	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
55493050	55495483	50110167	50107734	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
55490153	55492734	50113124	50110543	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
55487842	55489644	50115437	50113635	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
55485983	55487384	50117401	50116000	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
55483035	55484373	50120371	50119033	NC_000014.9	scaffold_0	100.0		True
local misassembly
55484491	55485883	50121761	50120373	NC_000014.9	scaffold_0	99.71		True
fake: scaffold gap size wrong estimation (local)
55481133	55482907	50124988	50123214	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
55464380	55480876	50141846	50125348	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
55456957	55463965	50149250	50142247	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
55446428	55456110	50159885	50150205	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
55440308	55441717	50165118	50163709	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
55435983	55438949	50169417	50166451	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
55421163	55435823	50184231	50169550	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
55331899	55420874	50273417	50184392	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
55323243	55331561	50282201	50273877	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
55286923	55323018	50318786	50282505	NC_000014.9	scaffold_0	99.01		True
fake: scaffold gap size wrong estimation (local)
55284593	55286841	50321138	50318891	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
55272190	55284380	50333460	50321332	NC_000014.9	scaffold_0	99.42		True
fake: scaffold gap size wrong estimation (local)
55234929	55271299	50370669	50334313	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
55227841	55234717	50377813	50370919	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
55210868	55227756	50395021	50377910	NC_000014.9	scaffold_0	98.67		True
fake: scaffold gap size wrong estimation (local)
55129239	55210549	50476749	50395379	NC_000014.9	scaffold_0	99.55		True
fake: scaffold gap size wrong estimation (local)
55110473	55129120	50495527	50476880	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
55099608	55109911	50506386	50496079	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
55083805	55099040	50522250	50507022	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
55076804	55083594	50529216	50522426	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
54997695	55076321	50608219	50529700	NC_000014.9	scaffold_0	99.66		True
fake: scaffold gap size wrong estimation (local)
54953746	54996820	50652146	50609035	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
54932765	54949867	50671461	50654363	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
54915681	54932588	50688441	50671551	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
54888636	54915500	50715613	50688743	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
54880792	54888530	50723417	50715695	NC_000014.9	scaffold_0	99.47		True
fake: scaffold gap size wrong estimation (local)
54875693	54879987	50728324	50724032	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
54873984	54875349	50729932	50728567	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
54863500	54871694	50740066	50731878	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
54860657	54862361	50742776	50741072	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
54851809	54860557	50751715	50742937	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
54837288	54850328	50766129	50753089	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
54826440	54836866	50776999	50766567	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
54739142	54826136	50864247	50777234	NC_000014.9	scaffold_0	99.77		True
indel: indel (<= 5bp)
54678555	54739074	50924862	50864319	NC_000014.9	scaffold_0	99.74		True
indel: stretch of mismatches
54547023	54678490	51056445	50924927	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
54530755	54546938	51072726	51056539	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
54504968	54530447	51098543	51073073	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
54372909	54504798	51230770	51098741	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
54323936	54372715	51279736	51230960	NC_000014.9	scaffold_0	99.99		True
local misassembly
54239954	54323699	51363571	51279825	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
54210044	54234231	51393644	51369462	NC_000014.9	scaffold_0	99.94		True
indel: indel (> 5bp)
54204771	54209962	51398937	51393746	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
54161291	54203060	51442224	51400449	NC_000014.9	scaffold_0	99.91		True
indel: indel (> 5bp)
54123419	54161256	51480153	51442301	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
54074267	54123181	51528863	51480313	NC_000014.9	scaffold_0	99.03		True
fake: scaffold gap size wrong estimation (local)
54031657	54072060	51571235	51530768	NC_000014.9	scaffold_0	99.68		True
fake: scaffold gap size wrong estimation (local)
54028875	54030667	51573987	51572195	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
54018773	54027857	51583992	51574913	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
54016003	54018294	51586640	51584349	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
54005991	54015855	51596666	51586786	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
53996724	54004488	51605864	51598095	NC_000014.9	scaffold_0	98.95		True
fake: scaffold gap size wrong estimation (local)
53928875	53996071	51673587	51606425	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
53911446	53927962	51691048	51674518	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
53708191	53909202	51893812	51693022	NC_000014.9	scaffold_0	99.7		True
fake: scaffold gap size wrong estimation (local)
53681234	53707896	51920690	51894046	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
53578593	53680893	52023348	51921030	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
53430319	53578335	52171601	52023583	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
53427168	53429429	52174619	52172358	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
53402507	53426625	52199297	52175177	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
53394352	53402210	52207434	52199576	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
53360579	53394019	52241214	52207771	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
53359362	53360286	52242403	52241479	NC_000014.9	scaffold_0	99.68		True
fake: scaffold gap size wrong estimation (local)
53350666	53358843	52251154	52242983	NC_000014.9	scaffold_0	99.61		True
fake: scaffold gap size wrong estimation (local)
53348242	53349538	52253566	52252270	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
53345778	53347928	52256074	52253929	NC_000014.9	scaffold_0	99.63		True
fake: scaffold gap size wrong estimation (local)
53343472	53344562	52258339	52257249	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
53324653	53342895	52277202	52258941	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
53314111	53318135	52288792	52284768	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
53311931	53313710	52291185	52289406	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
53304016	53311599	52299242	52291655	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
53271479	53298500	52333777	52306755	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
53195677	53266417	52410183	52339547	NC_000014.9	scaffold_0	99.74		True
local misassembly
53194740	53195589	52411356	52410507	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
53174375	53193816	52431389	52411941	NC_000014.9	scaffold_0	99.61		True
fake: scaffold gap size wrong estimation (local)
53155380	53174174	52450361	52431576	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
53152827	53155178	52452918	52450567	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
53094610	53152740	52511151	52453038	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
53086588	53094131	52519079	52511537	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
53004878	53086390	52600884	52519242	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
53000677	53002915	52604807	52602569	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
52912679	52999893	52692866	52605591	NC_000014.9	scaffold_0	99.8		True
local misassembly
52901281	52912528	52704597	52693353	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
52833861	52901044	52771913	52704787	NC_000014.9	scaffold_0	99.4		True
fake: scaffold gap size wrong estimation (local)
52830642	52832772	52775118	52772982	NC_000014.9	scaffold_0	99.58		True
fake: scaffold gap size wrong estimation (local)
52827411	52830385	52778373	52775399	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
52818753	52826632	52786982	52779103	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
52812426	52818561	52793313	52787178	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
52807927	52812248	52797753	52793432	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
52761961	52807809	52843760	52797837	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
52753935	52761585	52851686	52844043	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
52732267	52752897	52873467	52852836	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
52714724	52731451	52890876	52874235	NC_000014.9	scaffold_0	99.42		True
indel: indel (<= 5bp)
52706046	52714636	52899553	52890963	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
52639519	52705242	52965974	52900303	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
52581371	52638101	53023972	52967231	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
52574324	52580803	53031089	53024609	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
52530628	52574020	53074758	53031361	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
52521323	52528979	53084333	53076683	NC_000014.9	scaffold_0	99.91		True
local misassembly
52508531	52521284	53097246	53084492	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
52491398	52504336	53114002	53101069	NC_000014.9	scaffold_0	99.94		True
indel: indel (> 5bp)
52390071	52491366	53215346	53114081	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
52290368	52387213	53314630	53217747	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
52257919	52290162	53347115	53314871	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
52227567	52255527	53377095	53349140	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
52214052	52226135	53390569	53378481	NC_000014.9	scaffold_0	99.32		True
fake: scaffold gap size wrong estimation (local)
52211410	52213310	53393220	53391320	NC_000014.9	scaffold_0	99.42		True
fake: scaffold gap size wrong estimation (local)
52201048	52209643	53403404	53394813	NC_000014.9	scaffold_0	99.22		True
fake: scaffold gap size wrong estimation (local)
52162987	52199981	53447131	53409839	NC_000014.9	scaffold_0	99.22		True
fake: scaffold gap size wrong estimation (local)
52140094	52161988	53469909	53448035	NC_000014.9	scaffold_0	99.13		True
fake: scaffold gap size wrong estimation (local)
52128264	52139050	53481537	53470751	NC_000014.9	scaffold_0	99.44		True
fake: scaffold gap size wrong estimation (local)
52065964	52128042	53544026	53481835	NC_000014.9	scaffold_0	99.48		True
fake: scaffold gap size wrong estimation (local)
52046323	52065524	53563572	53544393	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
52027744	52044284	53581834	53565302	NC_000014.9	scaffold_0	99.55		True
fake: scaffold gap size wrong estimation (local)
51973263	52027667	53636307	53581906	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
51949240	51973149	53660360	53636445	NC_000014.9	scaffold_0	99.7		True
fake: scaffold gap size wrong estimation (local)
51800487	51948869	53809130	53660775	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
51773252	51794712	53837262	53815809	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
51735572	51772595	53875211	53838130	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
51701559	51735367	53909218	53875388	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
51628944	51701306	53981760	53909482	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
51469620	51628821	54141025	53981842	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
51468236	51469462	54142451	54141225	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
51416534	51466921	54194167	54143737	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
51413044	51414446	54197553	54196151	NC_000014.9	scaffold_0	99.79		True
indel: indel (> 5bp)
51313733	51413009	54296783	54197600	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
51273055	51312330	54337307	54298035	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
51247360	51272958	54363010	54337409	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
51215619	51247281	54394745	54363095	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
51191891	51213693	54418333	54396538	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
51178195	51191671	54432053	54418569	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
51170060	51178090	54440269	54432255	NC_000014.9	scaffold_0	99.66		True
fake: scaffold gap size wrong estimation (local)
51166252	51169797	54444011	54440466	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
51153622	51165905	54456639	54444349	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
51144338	51151827	54465637	54458156	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
51135379	51144220	54474548	54465706	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
50967291	51134654	54642197	54475154	NC_000014.9	scaffold_0	99.65		True
fake: scaffold gap size wrong estimation (local)
50964158	50967105	54645406	54642459	NC_000014.9	scaffold_0	99.9		True
local misassembly
50960633	50964061	54649253	54645823	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
50957951	50960109	54651895	54649736	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
50950813	50956608	54659000	54653211	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
50946286	50949496	54663404	54660193	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
50882483	50945557	54727708	54664230	NC_000014.9	scaffold_0	99.21		True
fake: scaffold gap size wrong estimation (local)
50759722	50881580	54850556	54728581	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
50753407	50759510	54856824	54850722	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
50751145	50753210	54859152	54857087	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
50742660	50750855	54867699	54859503	NC_000014.9	scaffold_0	99.98		True
indel: indel (<= 5bp)
50707443	50742454	54902741	54867904	NC_000014.9	scaffold_0	99.27		True
fake: scaffold gap size wrong estimation (local)
50646689	50706412	54963712	54903697	NC_000014.9	scaffold_0	99.45		True
fake: scaffold gap size wrong estimation (local)
50592930	50646528	55017466	54963866	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
50584664	50592763	55025759	55017660	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
50431800	50584502	55178509	55025929	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
50414335	50431397	55195976	55178927	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
50401269	50414245	55209061	55196064	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
50323443	50401122	55286977	55209195	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
50291198	50323184	55319117	55287144	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
50244237	50290123	55366047	55320172	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
50241495	50243804	55368816	55366507	NC_000014.9	scaffold_0	99.96		True
local misassembly
50238948	50240759	55370628	55368817	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
50231708	50238277	55377984	55371367	NC_000014.9	scaffold_0	99.33		True
fake: scaffold gap size wrong estimation (local)
50190397	50231396	55419362	55378334	NC_000014.9	scaffold_0	99.69		True
fake: scaffold gap size wrong estimation (local)
50174341	50189102	55435287	55420546	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
50146149	50173365	55463412	55436180	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
50142050	50145960	55467505	55463593	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
50133250	50140932	55476281	55468599	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
50113810	50132365	55495724	55477147	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
50079659	50113416	55529889	55496110	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
50052362	50073915	55559685	55538018	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
50043006	50051862	55569102	55560244	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
50037779	50042720	55574260	55569319	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
50023229	50037594	55588888	55574475	NC_000014.9	scaffold_0	99.61		True
indel: indel (> 5bp)
50008801	50023178	55603304	55588921	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
49983115	50008544	55629144	55603540	NC_000014.9	scaffold_0	99.31		True
indel: indel (> 5bp)
49919757	49982985	55692955	55629263	NC_000014.9	scaffold_0	99.21		True
fake: scaffold gap size wrong estimation (local)
49912697	49919549	55700087	55693164	NC_000014.9	scaffold_0	99.68		True
indel: indel (> 5bp)
49911529	49912645	55701267	55700151	NC_000014.9	scaffold_0	100.0		True
indel: indel (> 5bp)
49822156	49911414	55790624	55701370	NC_000014.9	scaffold_0	99.62		True
fake: scaffold gap size wrong estimation (local)
49761212	49820761	55850964	55791433	NC_000014.9	scaffold_0	99.66		True
fake: scaffold gap size wrong estimation (local)
49758312	49760767	55860753	55858298	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
49754090	49758140	55864944	55860894	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
49723092	49753982	55895908	55865043	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
49715784	49722532	55903251	55896506	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
49707655	49715027	55911623	55904019	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
49704519	49707296	55914728	55911946	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
49690332	49704403	55928950	55914875	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
49633137	49689464	55986013	55929765	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
49626814	49632542	55992250	55986522	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
49613448	49626420	56005604	55992630	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
49604138	49613019	56014885	56006011	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
49599890	49603705	56019163	56015359	NC_000014.9	scaffold_0	99.66		True
fake: scaffold gap size wrong estimation (local)
49589147	49599756	56030238	56019348	NC_000014.9	scaffold_0	97.41		True
fake: scaffold gap size wrong estimation (local)
49552560	49588899	56066773	56030446	NC_000014.9	scaffold_0	99.96		True
fake: not a misassembly (possible transposable element)
47760603	47761963	56066774	56068134	NC_000014.9	scaffold_0	100.0		True
fake: not a misassembly (possible transposable element)
49535949	49552617	56084849	56068196	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
49531843	49534139	56088710	56086414	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
49529962	49531691	56090719	56088990	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
49521069	49528759	56099524	56091834	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
49443005	49519837	56177378	56100517	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
49407171	49442653	56213159	56177720	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
49399488	49406762	56220786	56213512	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
49369812	49399226	56250498	56221022	NC_000014.9	scaffold_0	99.78		True
local misassembly
49361978	49369609	56258211	56250579	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
49360437	49361519	56259755	56258673	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
49351872	49360268	56268339	56259948	NC_000014.9	scaffold_0	99.81		True
indel: indel (<= 5bp)
49148450	49351834	56471810	56268374	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
49102348	49144835	56518127	56475646	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
49063325	49096366	56559133	56526218	NC_000014.9	scaffold_0	99.59		True
fake: scaffold gap size wrong estimation (local)
49032248	49062654	56590170	56559725	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
49023146	49031993	56599248	56590533	NC_000014.9	scaffold_0	98.47		True
local misassembly
48941312	49020564	56678228	56599344	NC_000014.9	scaffold_0	99.36		True
fake: scaffold gap size wrong estimation (local)
48938982	48941140	56680570	56678412	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
48934308	48938462	56686337	56682186	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
48921131	48933716	56699588	56687003	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
48830140	48920957	56790769	56699731	NC_000014.9	scaffold_0	99.91		True
indel: indel (> 5bp)
48827766	48830078	56793080	56790770	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
48824298	48827553	56796455	56793196	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
48750777	48823946	56869929	56796745	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
48702403	48750612	56918371	56870064	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
48660279	48699057	56959147	56920548	NC_000014.9	scaffold_0	99.33		True
fake: scaffold gap size wrong estimation (local)
48651116	48658525	56968110	56960701	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
48649352	48650725	56969876	56968503	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
48612012	48647740	57006956	56971299	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
48610451	48611877	57008526	57007100	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
48597229	48609052	57021765	57009943	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
48592187	48596212	57026708	57022683	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
48582413	48590564	57036311	57028160	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
48571587	48581775	57047066	57036882	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
48541949	48570745	57076680	57047963	NC_000014.9	scaffold_0	99.63		True
fake: scaffold gap size wrong estimation (local)
48485998	48541151	57132539	57077376	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
48454276	48484693	57164203	57133773	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
48444851	48453198	57173540	57165193	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
48440361	48444177	57178050	57174234	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
48415488	48438483	57202593	57179630	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
48370468	48411248	57246980	57206163	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
48357879	48368692	57259512	57248701	NC_000014.9	scaffold_0	99.93		True
fake: not a misassembly (possible transposable element)
92864811	92866091	57259513	57260793	NC_000014.9	scaffold_0	100.0		True
fake: not a misassembly (possible transposable element)
48355158	48357779	57263416	57260795	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
48339448	48354941	57279125	57263632	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
48315422	48338857	57303122	57279675	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
48282989	48314106	57335611	57304333	NC_000014.9	scaffold_0	99.42		True
fake: scaffold gap size wrong estimation (local)
48193121	48280451	57425275	57337983	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
48173015	48187226	57447423	57433205	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
48089673	48172965	57530787	57447464	NC_000014.9	scaffold_0	99.89		True
fake: not a misassembly (possible transposable element)
98399042	98401016	57530788	57532762	NC_000014.9	scaffold_0	100.0		True
fake: not a misassembly (possible transposable element)
48070705	48089232	57551287	57532764	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
48017988	48070137	57603942	57551786	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
47971897	48017565	57649983	57604318	NC_000014.9	scaffold_0	99.91		True
indel: indel (> 5bp)
47970797	47971810	57651030	57650017	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
47941535	47970756	57680409	57651185	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
47929923	47941276	57691970	57680619	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
47925830	47929187	57696210	57692663	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
47907055	47924613	57715132	57697576	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
47840631	47901659	57781096	57720376	NC_000014.9	scaffold_0	99.31		True
fake: scaffold gap size wrong estimation (local)
47831907	47833139	57790337	57789105	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
47807494	47831448	57814703	57790743	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
47800503	47806916	57821665	57815252	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
47792927	47793926	57831170	57830171	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
47786957	47792566	57837180	57831571	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
47760767	47786400	57863245	57837695	NC_000014.9	scaffold_0	99.63		True
fake: scaffold gap size wrong estimation (local)
47627349	47760448	57996520	57863461	NC_000014.9	scaffold_0	99.57		True
fake: scaffold gap size wrong estimation (local)
47609517	47627179	58014259	57996671	NC_000014.9	scaffold_0	99.36		True
fake: scaffold gap size wrong estimation (local)
47560264	47609439	58063556	58014390	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
47537370	47559625	58086491	58064220	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
47470578	47536887	58153170	58086873	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
47401003	47468738	58222444	58154827	NC_000014.9	scaffold_0	99.67		True
fake: scaffold gap size wrong estimation (local)
47382354	47400761	58240934	58222578	NC_000014.9	scaffold_0	99.37		True
fake: scaffold gap size wrong estimation (local)
47379279	47381240	58243868	58241902	NC_000014.9	scaffold_0	99.44		True
fake: scaffold gap size wrong estimation (local)
47311525	47379091	58311621	58244070	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
47308324	47310106	58314705	58312924	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
47291812	47307492	58331163	58315500	NC_000014.9	scaffold_0	99.66		True
fake: scaffold gap size wrong estimation (local)
47289401	47291382	58333645	58331664	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
47287513	47288592	58335540	58334461	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
47285426	47286775	58337677	58336328	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
47283287	47285125	58340067	58338229	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
47225564	47282450	58397642	58340753	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
47177478	47225230	58445665	58397916	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
47162073	47172633	58461663	58451103	NC_000014.9	scaffold_0	99.98		True
indel: indel (> 5bp)
47130212	47161962	58493494	58461758	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
47108579	47129535	58515030	58494095	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
47000754	47103401	58623572	58520569	NC_000014.9	scaffold_0	99.55		True
fake: scaffold gap size wrong estimation (local)
46969673	47000323	58654876	58624015	NC_000014.9	scaffold_0	99.04		True
fake: scaffold gap size wrong estimation (local)
46965107	46969435	58659385	58655057	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
46929669	46964983	58694821	58659526	NC_000014.9	scaffold_0	99.57		True
indel: indel (> 5bp)
46867467	46929594	58756986	58694878	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
46864589	46865818	58759758	58758530	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
46765270	46864493	58859415	58759972	NC_000014.9	scaffold_0	99.42		True
fake: scaffold gap size wrong estimation (local)
46727658	46764214	58896917	58860358	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
46678777	46726488	58945715	58898022	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
46615741	46678417	59008616	58945982	NC_000014.9	scaffold_0	99.7		True
fake: scaffold gap size wrong estimation (local)
46582319	46615460	59041879	59008752	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
46549420	46582176	59074782	59042028	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
46547226	46549149	59077000	59075074	NC_000014.9	scaffold_0	99.43		True
fake: scaffold gap size wrong estimation (local)
46514548	46546931	59109622	59077245	NC_000014.9	scaffold_0	99.67		True
fake: scaffold gap size wrong estimation (local)
46485788	46508995	59138922	59115688	NC_000014.9	scaffold_0	99.39		True
indel: indel (> 5bp)
46478553	46485707	59146131	59138972	NC_000014.9	scaffold_0	99.82		True
indel: indel (> 5bp)
46474378	46478519	59150340	59146190	NC_000014.9	scaffold_0	99.61		True
fake: scaffold gap size wrong estimation (local)
46429576	46473533	59195014	59151114	NC_000014.9	scaffold_0	99.66		True
fake: scaffold gap size wrong estimation (local)
46420183	46427701	59204234	59196719	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
46347703	46419142	59283596	59205216	NC_000014.9	scaffold_0	99.3		True
fake: scaffold gap size wrong estimation (local)
46274918	46346559	59356330	59284679	NC_000014.9	scaffold_0	99.94		True
indel: indel (<= 5bp)
46273729	46274850	59357520	59356399	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
46266522	46273438	59364864	59357948	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
46238427	46266219	59392944	59365196	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
46232407	46238062	59398991	59393336	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
46227687	46231201	59403611	59400100	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
46207792	46226500	59423478	59404754	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
46205459	46206648	59425713	59424524	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
46182994	46205247	59448185	59425932	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
46166864	46178552	59465439	59453750	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
46152967	46162208	59477201	59467959	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
46109045	46152216	59521054	59477877	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
46100800	46107862	59529032	59521978	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
46066011	46095221	59563094	59533853	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
46052486	46065510	59576517	59563500	NC_000014.9	scaffold_0	99.73		True
indel: indel (<= 5bp)
46011518	46052435	59617471	59576567	NC_000014.9	scaffold_0	99.63		True
fake: scaffold gap size wrong estimation (local)
46002021	46011044	59626954	59617917	NC_000014.9	scaffold_0	99.56		True
fake: scaffold gap size wrong estimation (local)
45993523	45999892	59635125	59628757	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
45929688	45991155	59698633	59637210	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
45891311	45926377	59738561	59703498	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
45889141	45890380	59740670	59739431	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
45876174	45878101	59753491	59751564	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
45873874	45875931	59755872	59753815	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
45866280	45872725	59763495	59756924	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
45855714	45865962	59773924	59763672	NC_000014.9	scaffold_0	99.67		True
fake: scaffold gap size wrong estimation (local)
45845509	45854972	59784150	59774685	NC_000014.9	scaffold_0	99.66		True
fake: scaffold gap size wrong estimation (local)
45842007	45844495	59787586	59785097	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
45823933	45841798	59805636	59787768	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
45795562	45823521	59834016	59806057	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
45789597	45795240	59839919	59834278	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
45780508	45788996	59848827	59840339	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
45771348	45780240	59858042	59849152	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
45767135	45770210	59862262	59859189	NC_000014.9	scaffold_0	99.71		True
fake: scaffold gap size wrong estimation (local)
45669651	45766734	59959670	59862587	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
45636310	45669117	59992989	59960182	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
45608139	45635601	60021537	59993939	NC_000014.9	scaffold_0	99.42		True
fake: scaffold gap size wrong estimation (local)
45551407	45596573	60079423	60034276	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
45506796	45545822	60125060	60086029	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
45499239	45506559	60132560	60125240	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
45484701	45497845	60147036	60133888	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
45419146	45475100	60213427	60157296	NC_000014.9	scaffold_0	99.62		True
fake: scaffold gap size wrong estimation (local)
45416399	45418979	60216129	60213549	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
45414573	45416135	60218044	60216482	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
45390641	45414262	60241962	60218342	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
45384958	45389086	60247725	60243597	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
45351210	45384268	60281393	60248329	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
45323053	45349681	60309430	60282853	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
45266051	45320644	60366677	60312075	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
45251032	45265937	60381816	60366905	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
45146835	45250903	60486078	60382022	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
45087811	45145881	60545065	60487006	NC_000014.9	scaffold_0	99.97		True
indel: indel (> 5bp)
45055843	45087723	60576970	60545135	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
45045588	45055638	60587136	60577095	NC_000014.9	scaffold_0	99.83		True
indel: indel (> 5bp)
45025532	45045531	60607202	60587205	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
44987937	45025312	60644727	60607366	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
44917136	44986826	60715747	60645734	NC_000014.9	scaffold_0	99.59		True
fake: scaffold gap size wrong estimation (local)
44891828	44916248	60740972	60716557	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
44880569	44891247	60752231	60741553	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
44859161	44879843	60773567	60752884	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
44710956	44858311	60921596	60774269	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
44684511	44705178	60948170	60927541	NC_000014.9	scaffold_0	99.62		True
fake: scaffold gap size wrong estimation (local)
44677649	44683393	60954824	60949096	NC_000014.9	scaffold_0	99.67		True
fake: scaffold gap size wrong estimation (local)
44645014	44674840	60987450	60957624	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
44601682	44641913	61030902	60990675	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
44585372	44600408	61047031	61031995	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
44575332	44582433	61057643	61050557	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
44559426	44575236	61073578	61057768	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
44556392	44558315	61076516	61074592	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
44542217	44551417	61092258	61083070	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
44526139	44541914	61108284	61092512	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
44514786	44525822	61119638	61108602	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
44501237	44513649	61133112	61120772	NC_000014.9	scaffold_0	99.4		True
fake: scaffold gap size wrong estimation (local)
44474418	44501021	61159895	61133307	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
44461324	44471192	61174001	61164134	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
44458422	44460937	61176908	61174393	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
44366677	44457847	61268526	61177346	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
44324866	44366381	61310285	61268772	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
44213629	44311845	61421883	61323713	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
44211048	44212847	61424383	61422584	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
44206466	44208781	61428520	61426205	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
44203076	44205622	61431866	61429318	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
44185811	44202836	61449063	61432146	NC_000014.9	scaffold_0	99.22		True
fake: scaffold gap size wrong estimation (local)
44160148	44185604	61474696	61449231	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
44128293	44158220	61506272	61476345	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
44026983	44126982	61607450	61507476	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
43998707	44023467	61636320	61611569	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
43968645	43997982	61666385	61636993	NC_000014.9	scaffold_0	99.67		True
fake: scaffold gap size wrong estimation (local)
43825640	43968452	61809341	61666541	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
43722210	43824976	61912773	61810041	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
43704536	43722049	61930412	61912897	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
43663710	43698762	61970482	61935434	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
43603219	43663367	62031008	61970870	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
43566519	43598702	62068745	62036582	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
43553077	43566379	62082148	62068867	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
43498513	43552499	62136699	62082706	NC_000014.9	scaffold_0	99.7		True
fake: scaffold gap size wrong estimation (local)
43460580	43492617	62175663	62143716	NC_000014.9	scaffold_0	99.66		True
fake: scaffold gap size wrong estimation (local)
43406375	43459974	62229717	62176192	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
43392595	43405714	62243471	62230347	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
43376266	43391418	62259639	62244546	NC_000014.9	scaffold_0	99.56		True
fake: scaffold gap size wrong estimation (local)
43344089	43370830	62294110	62267380	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
43267904	43343793	62370299	62294413	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
43257470	43263238	62380399	62374631	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
43255441	43256628	62382281	62381094	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
43068055	43253961	62569490	62383549	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
43025717	43062943	62611796	62574575	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
43000065	43025327	62637413	62612151	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
42973076	42997803	62664098	62639339	NC_000014.9	scaffold_0	99.46		True
fake: scaffold gap size wrong estimation (local)
42958587	42967715	62681269	62672144	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
42938878	42953874	62700573	62685577	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
42902946	42938637	62736530	62700843	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
42883164	42902791	62756362	62736749	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
42839902	42882699	62799520	62756730	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
42821303	42838386	62817867	62800950	NC_000014.9	scaffold_0	98.96		True
fake: scaffold gap size wrong estimation (local)
42709566	42820956	62929577	62818225	NC_000014.9	scaffold_0	99.53		True
fake: scaffold gap size wrong estimation (local)
42708058	42709437	62931106	62929727	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
42641622	42707780	62997520	62931359	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
42613297	42641379	63025816	62997737	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
42569452	42613188	63070028	63025925	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
42567018	42568144	63072348	63071222	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
42501519	42566408	63137792	63072898	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
42446057	42499897	63192941	63139122	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
42427764	42445413	63211249	63193601	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
42393981	42425907	63244660	63212946	NC_000014.9	scaffold_0	99.3		True
fake: scaffold gap size wrong estimation (local)
42367674	42393145	63270921	63245448	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
42356621	42365677	63281866	63272812	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
42330322	42356293	63308107	63282141	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
42292383	42330204	63346112	63308291	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
42275687	42292042	63362747	63346392	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
42258016	42275484	63380372	63362910	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
42207434	42255470	63430526	63382489	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
42182026	42203133	63456116	63434947	NC_000014.9	scaffold_0	99.69		True
fake: scaffold gap size wrong estimation (local)
42160614	42181835	63477519	63456306	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
42154106	42159354	63483932	63478689	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
42142878	42151325	63496451	63487999	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
42098353	42142392	63540858	63496850	NC_000014.9	scaffold_0	99.88		True
indel: indel (<= 5bp)
42097260	42098259	63541955	63540956	NC_000014.9	scaffold_0	99.9		True
local misassembly
42093024	42096921	63545853	63541956	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
42051600	42092739	63587144	63546032	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
42011258	42051209	63627574	63587595	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
42006788	42010496	63632013	63628305	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
41999121	42006566	63639744	63632300	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
41977063	41998820	63661831	63640080	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
41910092	41976847	63728698	63661998	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
41856825	41906301	63783024	63733562	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
41845351	41856677	63794476	63783139	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
41765291	41844247	63874480	63795576	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
41755528	41765053	63884119	63874598	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
41675446	41752790	63963659	63886335	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
41671773	41673230	63967080	63965623	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
41590655	41671610	64048112	63967170	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
41583561	41590515	64055165	64048211	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
41554878	41582911	64083813	64055799	NC_000014.9	scaffold_0	99.87		True
indel: indel (<= 5bp)
41540851	41554825	64097825	64083865	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
41521842	41539336	64116696	64099203	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
41519310	41521207	64119177	64117280	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
41516344	41517950	64122163	64120557	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
41497015	41515895	64141654	64122574	NC_000014.9	scaffold_0	98.9		True
fake: scaffold gap size wrong estimation (local)
41492808	41496736	64145806	64141878	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
41420786	41492353	64218336	64146273	NC_000014.9	scaffold_0	99.24		True
fake: scaffold gap size wrong estimation (local)
41411714	41420520	64227392	64218578	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
41386638	41411523	64252431	64227537	NC_000014.9	scaffold_0	99.88		True
indel: indel (> 5bp)
41371929	41386576	64267125	64252478	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
41347795	41371257	64291158	64267725	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
41339439	41347221	64299384	64291598	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
41325573	41335305	64314864	64305200	NC_000014.9	scaffold_0	99.16		True
fake: scaffold gap size wrong estimation (local)
41291235	41325258	64349148	64315176	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
41278508	41290340	64361816	64349984	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
41272936	41277997	64367352	64362290	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
41247653	41271366	64392500	64368787	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
41235335	41246796	64404792	64393331	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
41232798	41234612	64407160	64405346	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
41231706	41232624	64408304	64407386	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
41214175	41231481	64425907	64408429	NC_000014.9	scaffold_0	98.89		True
fake: scaffold gap size wrong estimation (local)
41197294	41209494	64442663	64430443	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
41062480	41194622	64576947	64444854	NC_000014.9	scaffold_0	99.58		True
fake: scaffold gap size wrong estimation (local)
41042917	41062176	64596505	64577220	NC_000014.9	scaffold_0	99.11		True
fake: scaffold gap size wrong estimation (local)
41041387	41042680	64598090	64596797	NC_000014.9	scaffold_0	99.07		True
fake: scaffold gap size wrong estimation (local)
41038738	41039993	64600825	64599570	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
41035943	41037319	64603547	64602171	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
41033117	41035113	64606393	64604397	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
41025651	41032891	64613841	64606601	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
41024113	41025306	64615608	64614415	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
41018420	41023607	64621259	64616072	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
41007214	41016599	64632107	64622793	NC_000014.9	scaffold_0	99.15		True
fake: scaffold gap size wrong estimation (local)
41005770	41006887	64633785	64632668	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
41003264	41004405	64636393	64635252	NC_000014.9	scaffold_0	100.0		True
local misassembly
41004209	41005253	64637439	64636395	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
40954886	41002892	64686774	64638735	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
40929132	40948907	64714711	64694950	NC_000014.9	scaffold_0	99.67		True
fake: scaffold gap size wrong estimation (local)
40894165	40927811	64749760	64715772	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
40849611	40894017	64794364	64749944	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
40848031	40849354	64795894	64794571	NC_000014.9	scaffold_0	99.85		True
local misassembly
40840108	40844029	64799816	64795895	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
40836067	40840012	64803879	64799933	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
40833590	40835606	64806348	64804332	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
40776102	40833486	64863910	64806615	NC_000014.9	scaffold_0	99.1		True
fake: scaffold gap size wrong estimation (local)
40731392	40775997	64908614	64864003	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
40720237	40728725	64919411	64910920	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
40641648	40719013	64997931	64920560	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
40630119	40641375	65009478	64998205	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
40611770	40629696	65028133	65010035	NC_000014.9	scaffold_0	98.97		True
fake: scaffold gap size wrong estimation (local)
40607860	40610328	65032154	65029693	NC_000014.9	scaffold_0	99.63		True
fake: scaffold gap size wrong estimation (local)
40606795	40607713	65033174	65032256	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
40604013	40605678	65036092	65034428	NC_000014.9	scaffold_0	99.64		True
fake: scaffold gap size wrong estimation (local)
40598734	40603080	65041291	65036945	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
40597016	40598516	65042921	65041420	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
40594234	40595923	65045875	65044184	NC_000014.9	scaffold_0	99.64		True
local misassembly
40592998	40595017	65047896	65045877	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
40590460	40592147	65050604	65048917	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
40586403	40589399	65054682	65051686	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
40584024	40585486	65057328	65055866	NC_000014.9	scaffold_0	99.38		True
local misassembly
40582890	40583839	65058278	65057329	NC_000014.9	scaffold_0	99.26		True
fake: scaffold gap size wrong estimation (local)
40568707	40581324	65072545	65059924	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
40565038	40567810	65076291	65073520	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
40562909	40564141	65078577	65077346	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
40560392	40562234	65081207	65079365	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
40555752	40559659	65086089	65082031	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
40553950	40555180	65087966	65086734	NC_000014.9	scaffold_0	99.68		True
fake: scaffold gap size wrong estimation (local)
40548468	40553173	65093468	65088763	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
40544964	40547995	65097006	65093975	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
40542231	40544405	65099857	65097683	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
40539448	40540800	65102464	65101112	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
40535029	40538125	65106879	65103784	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
40533363	40534758	65108398	65107003	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
40529350	40531640	65112291	65109993	NC_000014.9	scaffold_0	99.61		True
fake: scaffold gap size wrong estimation (local)
40525902	40527259	65115553	65114196	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
40524028	40525390	65117662	65116317	NC_000014.9	scaffold_0	98.68		True
fake: scaffold gap size wrong estimation (local)
40518267	40523384	65123393	65118276	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
40500181	40517849	65141516	65123838	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
40424525	40500074	65217163	65141599	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
40381430	40422565	65260335	65218890	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
40353958	40377127	65286809	65263650	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
40332210	40348435	65307935	65291712	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
40291154	40326948	65352855	65317057	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
40266547	40290551	65377363	65353360	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
40175093	40266220	65468816	65377639	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
40164742	40174057	65479447	65470016	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
40159844	40164243	65484240	65479841	NC_000014.9	scaffold_0	99.66		True
indel: indel (<= 5bp)
40159071	40159842	65485012	65484241	NC_000014.9	scaffold_0	100.0		True
indel: indel (<= 5bp)
40150347	40159056	65493734	65485025	NC_000014.9	scaffold_0	99.62		True
indel: indel (<= 5bp)
40148493	40150311	65495587	65493769	NC_000014.9	scaffold_0	99.89		True
relocation, inconsistency = 7886
40134980	40140606	65501214	65495588	NC_000014.9	scaffold_0	99.96		True
indel: indel (<= 5bp)
40133825	40134977	65502367	65501215	NC_000014.9	scaffold_0	99.65		True
indel: indel (<= 5bp)
40132933	40133822	65503257	65502368	NC_000014.9	scaffold_0	99.66		True
indel: indel (<= 5bp)
40127640	40132932	65508554	65503262	NC_000014.9	scaffold_0	99.7		True
indel: indel (<= 5bp)
40123228	40127637	65512964	65508555	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
40120237	40123227	65516107	65513117	NC_000014.9	scaffold_0	99.83		True
indel: indel (<= 5bp)
40119019	40120236	65517326	65516109	NC_000014.9	scaffold_0	99.84		True
indel: indel (<= 5bp)
40118479	40119018	65517867	65517328	NC_000014.9	scaffold_0	99.63		True
indel: indel (<= 5bp)
40115563	40118478	65520784	65517869	NC_000014.9	scaffold_0	99.73		True
indel: indel (<= 5bp)
40114977	40115561	65521369	65520785	NC_000014.9	scaffold_0	100.0		True
indel: indel (<= 5bp)
40114398	40114974	65521946	65521370	NC_000014.9	scaffold_0	98.61		True
indel: indel (<= 5bp)
40113031	40114393	65523309	65521947	NC_000014.9	scaffold_0	99.71		True
indel: indel (<= 5bp)
40110492	40113027	65525845	65523310	NC_000014.9	scaffold_0	99.65		True
fake: scaffold gap size wrong estimation (local)
40109261	40110491	65527499	65526269	NC_000014.9	scaffold_0	98.05		True
fake: scaffold gap size wrong estimation (local)
40023242	40109152	65613405	65527607	NC_000014.9	scaffold_0	99.66		True
fake: scaffold gap size wrong estimation (local)
39950713	40022609	65685942	65614039	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
39942917	39950349	65693696	65686263	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
39937097	39941902	65699404	65694602	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
39929705	39935476	65706589	65700817	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
39924877	39928887	65711297	65707287	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
39866199	39921541	65770775	65715406	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
39863135	39865184	65773768	65771719	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
39824326	39862608	65813087	65774214	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
39702699	39822876	65934604	65814421	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
39661912	39697764	65975859	65940001	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
39656432	39657496	65980665	65979601	NC_000014.9	scaffold_0	100.0		True
local misassembly
39657565	39658711	65981813	65980667	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
39638161	39656411	66001114	65982880	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
39630939	39633943	66008368	66005364	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
39627969	39629223	66011287	66010033	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
39601642	39627733	66037707	66011617	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
39589832	39600842	66049401	66038391	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
39560781	39584951	66079738	66055565	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
39552592	39560504	66087908	66079998	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
39526536	39550553	66113707	66089699	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
39518440	39521616	66120359	66117183	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
39512407	39517144	66126322	66121589	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
39483667	39511133	66154994	66127524	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
39405199	39480973	66233263	66157509	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
39357502	39403481	66280934	66234827	NC_000014.9	scaffold_0	99.56		True
fake: scaffold gap size wrong estimation (local)
39342449	39354030	66296847	66285268	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
39329656	39342174	66309622	66297105	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
39321846	39329504	66317549	66309890	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
39297667	39321393	66341669	66317959	NC_000014.9	scaffold_0	99.44		True
fake: scaffold gap size wrong estimation (local)
39285808	39296612	66353442	66342620	NC_000014.9	scaffold_0	99.11		True
fake: scaffold gap size wrong estimation (local)
39277781	39285417	66361401	66353774	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
39263152	39277599	66375959	66361492	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
39259983	39261203	66378797	66377577	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
39243125	39259717	66395712	66379167	NC_000014.9	scaffold_0	99.43		True
fake: scaffold gap size wrong estimation (local)
39199882	39242932	66439071	66395822	NC_000014.9	scaffold_0	99.39		True
fake: scaffold gap size wrong estimation (local)
39194910	39198624	66444028	66440305	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
39147653	39194639	66491241	66444240	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
39144841	39145953	66494049	66492937	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
39139766	39144696	66499178	66494249	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
39132717	39139165	66506214	66499766	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
39129935	39132335	66508992	66506592	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
39128077	39129755	66510806	66509136	NC_000014.9	scaffold_0	99.34		True
fake: scaffold gap size wrong estimation (local)
39117272	39127109	66521569	66511747	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
39056480	39115475	66582326	66523287	NC_000014.9	scaffold_0	99.3		True
fake: scaffold gap size wrong estimation (local)
39049752	39055523	66589018	66583240	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
39041869	39049439	66596822	66589256	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
39022775	39041412	66615869	66597225	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
38997829	39017621	66641472	66621678	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
38986407	38997728	66652896	66641574	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
38969284	38984553	66669806	66654531	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
38949573	38966826	66689275	66671965	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
38937243	38949256	66701619	66689578	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
38927323	38935974	66711502	66702851	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
38831526	38923302	66807458	66715677	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
38768537	38831140	66870581	66807757	NC_000014.9	scaffold_0	99.63		True
fake: scaffold gap size wrong estimation (local)
38757955	38765882	66880695	66872760	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
38716407	38757701	66922063	66880799	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
38686183	38714795	66952131	66923519	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
38676213	38685905	66962007	66952323	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
38649088	38675226	66989065	66962923	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
38640767	38648994	66997417	66989191	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
38634741	38635868	67002973	67001846	NC_000014.9	scaffold_0	99.91		True
indel: indel (> 5bp)
38597394	38634678	67040318	67003027	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
38575550	38596259	67062142	67041390	NC_000014.9	scaffold_0	99.71		True
fake: scaffold gap size wrong estimation (local)
38447547	38575397	67189763	67062271	NC_000014.9	scaffold_0	99.66		True
fake: scaffold gap size wrong estimation (local)
38428542	38447387	67208771	67189921	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
38374441	38427574	67262751	67209622	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
38364045	38373366	67273082	67263761	NC_000014.9	scaffold_0	99.64		True
fake: scaffold gap size wrong estimation (local)
38362441	38363789	67274808	67273471	NC_000014.9	scaffold_0	98.96		True
fake: scaffold gap size wrong estimation (local)
38313193	38360785	67323978	67276370	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
38285862	38312694	67351150	67324513	NC_000014.9	scaffold_0	99.16		True
fake: scaffold gap size wrong estimation (local)
38195232	38285674	67441658	67351242	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
38103031	38192118	67532738	67443679	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
38101333	38102764	67534443	67533012	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
38076694	38100240	67559120	67535575	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
38058652	38075559	67577069	67560161	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
37955910	38057037	67679595	67578548	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
37923441	37950486	67713446	67686399	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
37863684	37920235	67774328	67717542	NC_000014.9	scaffold_0	99.75		True
fake: scaffold gap size wrong estimation (local)
37809407	37863060	67828619	67774987	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
37784317	37809268	67853669	67828707	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
37782970	37784047	67855093	67854016	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
37772257	37782372	67865641	67855743	NC_000014.9	scaffold_0	97.67		True
fake: scaffold gap size wrong estimation (local)
37732796	37767176	67906814	67872307	NC_000014.9	scaffold_0	99.34		True
fake: scaffold gap size wrong estimation (local)
37725444	37732628	67914103	67906923	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
37631528	37725309	68008050	67914266	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
37625548	37631251	68014010	68008311	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
37558686	37624803	68080892	68014777	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
37556512	37557549	68083098	68082061	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
37526581	37554489	68112904	68084997	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
37497212	37526386	68142234	68113059	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
37446819	37495265	68192491	68143951	NC_000014.9	scaffold_0	99.66		True
fake: scaffold gap size wrong estimation (local)
37431774	37444795	68207283	68194276	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
37360934	37431592	68278212	68207429	NC_000014.9	scaffold_0	99.69		True
fake: scaffold gap size wrong estimation (local)
37356875	37359632	68282229	68279472	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
37337503	37351101	68302588	68288989	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
37302142	37337340	68337946	68302735	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
37239169	37296755	68402335	68344752	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
37163295	37238710	68478178	68402790	NC_000014.9	scaffold_0	99.71		True
fake: scaffold gap size wrong estimation (local)
37157636	37161980	68483813	68479468	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
37091527	37157221	68549876	68484221	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
37056490	37091445	68584932	68549982	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
37041766	37056306	68599629	68585088	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
37032672	37041454	68608853	68600169	NC_000014.9	scaffold_0	98.78		True
fake: scaffold gap size wrong estimation (local)
37020032	37032210	68621523	68609325	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
37016470	37019802	68625030	68621698	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
36996653	37015087	68644846	68626464	NC_000014.9	scaffold_0	99.67		True
fake: scaffold gap size wrong estimation (local)
36995116	36996219	68646452	68645349	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
36991517	36994439	68650128	68647206	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
36985188	36989272	68656190	68652106	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
36924328	36984872	68716917	68656396	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
36895752	36924038	68745440	68717153	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
36873624	36893726	68767432	68747332	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
36871973	36873294	68769136	68767815	NC_000014.9	scaffold_0	99.55		True
fake: scaffold gap size wrong estimation (local)
36869248	36870614	68771892	68770526	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
36813168	36867455	68827821	68773543	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
36810221	36812353	68830799	68828631	NC_000014.9	scaffold_0	98.25		True
fake: scaffold gap size wrong estimation (local)
36789981	36809941	68850994	68831035	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
36782967	36789670	68857947	68851244	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
36779618	36782839	68861286	68858065	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
36757342	36779282	68883595	68861618	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
36745343	36757051	68895630	68883911	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
36696695	36745186	68944253	68895782	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
36673145	36694295	68967581	68946406	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
36635352	36672816	69005305	68967843	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
36633356	36634462	69007352	69006246	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
36608743	36632419	69031863	69008189	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
36600034	36608190	69040704	69032548	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
36572776	36599791	69067919	69040904	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
36570509	36572147	69070167	69068529	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
36545048	36569757	69095596	69070887	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
36498284	36543664	69142257	69096917	NC_000014.9	scaffold_0	99.83		True
indel: indel (<= 5bp)
36432544	36498242	69207964	69142301	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
36415809	36431745	69224792	69208686	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
36411272	36413378	69228881	69226775	NC_000014.9	scaffold_0	99.53		True
fake: scaffold gap size wrong estimation (local)
36358931	36410789	69281172	69229348	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
36354137	36357390	69285856	69282603	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
36246751	36353501	69393216	69286487	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
36190615	36246205	69449850	69393931	NC_000014.9	scaffold_0	99.56		True
fake: scaffold gap size wrong estimation (local)
36148405	36185030	69492672	69455883	NC_000014.9	scaffold_0	99.42		True
fake: scaffold gap size wrong estimation (local)
36121344	36142738	69520371	69498925	NC_000014.9	scaffold_0	99.5		True
fake: scaffold gap size wrong estimation (local)
36026175	36120233	69615616	69521342	NC_000014.9	scaffold_0	99.46		True
fake: scaffold gap size wrong estimation (local)
35981814	36025961	69659963	69615828	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
35978657	35981015	69663018	69660660	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
35949731	35976281	69691918	69665354	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
35936853	35948136	69704813	69693539	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
35922869	35936645	69718749	69704974	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
35909387	35922578	69732236	69719043	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
35885102	35908972	69756529	69732653	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
35873789	35884885	69767769	69756672	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
35825197	35873209	69816537	69768312	NC_000014.9	scaffold_0	99.54		True
fake: scaffold gap size wrong estimation (local)
35812280	35824209	69829325	69817401	NC_000014.9	scaffold_0	99.95		True
indel: indel (<= 5bp)
35792885	35812222	69848716	69829388	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
35737793	35792793	69903771	69848813	NC_000014.9	scaffold_0	99.86		True
indel: indel (> 5bp)
35625077	35737647	70016450	69903866	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
35554513	35624145	70086934	70017331	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
35525486	35554360	70115963	70087090	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
35406172	35525189	70235082	70116188	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
35404283	35405592	70237131	70235822	NC_000014.9	scaffold_0	99.85		True
local misassembly
35405649	35406726	70238210	70237133	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
35396550	35403999	70247513	70239945	NC_000014.9	scaffold_0	99.68		True
fake: scaffold gap size wrong estimation (local)
35393587	35395153	70250448	70248882	NC_000014.9	scaffold_0	100.0		True
indel: indel (> 5bp)
35384252	35393525	70259849	70250584	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
35382941	35383996	70261261	70260206	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
35375399	35381730	70268993	70262521	NC_000014.9	scaffold_0	99.46		True
fake: scaffold gap size wrong estimation (local)
35351171	35373216	70292971	70270913	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
35349161	35350931	70295083	70293313	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
35312399	35348356	70331914	70295969	NC_000014.9	scaffold_0	99.89		True
local misassembly
35297462	35312176	70346919	70331998	NC_000014.9	scaffold_0	98.59		True
fake: scaffold gap size wrong estimation (local)
35190407	35297141	70453945	70347201	NC_000014.9	scaffold_0	99.91		True
fake: not a misassembly (possible transposable element)
24096251	24097429	70453948	70455126	NC_000014.9	scaffold_0	100.0		True
fake: not a misassembly (possible transposable element)
35180295	35190340	70465186	70455128	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
35153407	35174676	70492783	70471522	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
35136366	35152077	70509737	70494025	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
35132908	35135729	70513163	70510342	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
35130040	35132588	70516012	70513464	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
35111157	35128132	70534743	70517765	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
35109097	35110979	70536912	70535030	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
35106832	35108688	70539271	70537407	NC_000014.9	scaffold_0	99.52		True
fake: scaffold gap size wrong estimation (local)
35090938	35106046	70555227	70540121	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
35087714	35089855	70558373	70556232	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
35077690	35087590	70568447	70558542	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
35076163	35077166	70570006	70569003	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
35070126	35075595	70575999	70570527	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
35066564	35069988	70579554	70576130	NC_000014.9	scaffold_0	99.97		True
indel: indel (<= 5bp)
35065283	35066406	70580836	70579713	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
35064034	35065282	70582352	70581104	NC_000014.9	scaffold_0	99.52		True
fake: scaffold gap size wrong estimation (local)
35040198	35062807	70606371	70583619	NC_000014.9	scaffold_0	99.38		True
fake: scaffold gap size wrong estimation (local)
35007691	35038578	70638865	70607979	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
34994976	35007466	70651955	70639199	NC_000014.9	scaffold_0	97.99		True
indel: indel (> 5bp)
34953651	34994913	70693292	70651995	NC_000014.9	scaffold_0	99.15		True
fake: scaffold gap size wrong estimation (local)
34950924	34953259	70696033	70693698	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
34934748	34950723	70711890	70696239	NC_000014.9	scaffold_0	97.9		True
fake: scaffold gap size wrong estimation (local)
34932426	34934166	70714437	70712707	NC_000014.9	scaffold_0	99.43		True
fake: scaffold gap size wrong estimation (local)
34899646	34932285	70747298	70714667	NC_000014.9	scaffold_0	99.87		True
local misassembly
34898237	34899019	70749176	70748394	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
34884622	34897151	70762662	70750182	NC_000014.9	scaffold_0	99.46		True
fake: scaffold gap size wrong estimation (local)
34879451	34884273	70767866	70763045	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
34877158	34879152	70770218	70768233	NC_000014.9	scaffold_0	99.55		True
fake: scaffold gap size wrong estimation (local)
34869139	34876574	70778344	70770908	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
34863173	34868608	70784297	70778859	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
34852015	34862795	70795465	70784684	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
34839645	34851786	70807543	70795735	NC_000014.9	scaffold_0	97.21		True
fake: scaffold gap size wrong estimation (local)
34833445	34839558	70813710	70807754	NC_000014.9	scaffold_0	97.39		True
fake: scaffold gap size wrong estimation (local)
34828294	34833229	70818784	70813858	NC_000014.9	scaffold_0	99.7		True
fake: scaffold gap size wrong estimation (local)
34825322	34827709	70821692	70819304	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
34822712	34825204	70824373	70821913	NC_000014.9	scaffold_0	98.67		True
fake: scaffold gap size wrong estimation (local)
34820138	34821940	70826823	70825021	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
34784731	34818955	70862190	70827949	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
34759295	34784177	70887679	70862781	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
34738057	34757878	70908811	70888909	NC_000014.9	scaffold_0	99.43		True
fake: scaffold gap size wrong estimation (local)
34727602	34736779	70919200	70910026	NC_000014.9	scaffold_0	98.62		True
fake: scaffold gap size wrong estimation (local)
34725410	34726702	70921438	70920146	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
34709837	34724403	70936992	70922448	NC_000014.9	scaffold_0	99.62		True
indel: indel (> 5bp)
34704419	34709805	70942270	70937030	NC_000014.9	scaffold_0	97.13		True
fake: scaffold gap size wrong estimation (local)
34702255	34703346	70944501	70943406	NC_000014.9	scaffold_0	99.36		True
fake: scaffold gap size wrong estimation (local)
34698909	34701364	70947989	70945534	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
34695964	34697351	70950863	70949476	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
34690091	34695361	70956714	70951442	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
34682434	34689831	70964376	70956987	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
34679717	34681105	70967076	70965688	NC_000014.9	scaffold_0	100.0		True
local misassembly
34681089	34682348	70968337	70967078	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
34664157	34679697	70985178	70969637	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
34659647	34663674	70989620	70985594	NC_000014.9	scaffold_0	99.98		True
fake: not a misassembly (possible transposable element)
50962835	50964061	70990929	70989702	NC_000014.9	scaffold_0	99.76		True
fake: not a misassembly (possible transposable element)
34644781	34659374	71005518	70990931	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
34643638	34644225	71007125	71006538	NC_000014.9	scaffold_0	98.98		True
local misassembly
34639534	34643054	71010659	71007139	NC_000014.9	scaffold_0	99.66		True
fake: scaffold gap size wrong estimation (local)
34625145	34639365	71025185	71010851	NC_000014.9	scaffold_0	98.86		True
fake: scaffold gap size wrong estimation (local)
34622571	34624812	71027777	71025536	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
34617784	34621967	71032565	71028382	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
34602894	34617627	71047463	71032646	NC_000014.9	scaffold_0	99.62		True
fake: scaffold gap size wrong estimation (local)
34587799	34602379	71062542	71047969	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
34582238	34587023	71067990	71063205	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
34578760	34581814	71071384	71068320	NC_000014.9	scaffold_0	99.61		True
indel: indel (<= 5bp)
34565894	34578633	71084238	71071507	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
34560696	34565282	71089645	71085055	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
34535460	34540836	71114290	71108917	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
34533137	34535217	71116590	71114512	NC_000014.9	scaffold_0	99.71		True
fake: scaffold gap size wrong estimation (local)
34531320	34532081	71118505	71117744	NC_000014.9	scaffold_0	99.87		True
local misassembly
34530032	34530966	71119496	71118562	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
34512223	34529841	71137484	71119820	NC_000014.9	scaffold_0	99.55		True
fake: scaffold gap size wrong estimation (local)
34508653	34511754	71141019	71137920	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
34504941	34507147	71144604	71142397	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
34498622	34504705	71150786	71144705	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
34495880	34498103	71153582	71151358	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
34487403	34495428	71162026	71154014	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
34484679	34486720	71164641	71162607	NC_000014.9	scaffold_0	99.56		True
fake: scaffold gap size wrong estimation (local)
34476137	34484355	71173155	71164943	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
34413368	34475425	71235597	71173901	NC_000014.9	scaffold_0	99.41		True
fake: scaffold gap size wrong estimation (local)
34386358	34411476	71262331	71237218	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
34350819	34385588	71297706	71263043	NC_000014.9	scaffold_0	99.51		True
fake: scaffold gap size wrong estimation (local)
34339700	34348258	71308230	71299660	NC_000014.9	scaffold_0	99.78		True
indel: indel (> 5bp)
34306521	34339560	71341286	71308309	NC_000014.9	scaffold_0	99.42		True
fake: scaffold gap size wrong estimation (local)
34297062	34306401	71350705	71341357	NC_000014.9	scaffold_0	99.58		True
fake: scaffold gap size wrong estimation (local)
34278532	34294638	71368782	71352677	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
34273824	34277786	71373418	71369385	NC_000014.9	scaffold_0	98.19		True
fake: scaffold gap size wrong estimation (local)
34253531	34273211	71393655	71373962	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
34250845	34252944	71396348	71394249	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
34245796	34247795	71401339	71399337	NC_000014.9	scaffold_0	99.05		True
fake: scaffold gap size wrong estimation (local)
34205792	34245677	71441371	71401484	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
34195014	34205234	71452109	71441882	NC_000014.9	scaffold_0	99.49		True
fake: scaffold gap size wrong estimation (local)
34186568	34193413	71460413	71453567	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
34155979	34185455	71490908	71461451	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
34095122	34151512	71552054	71495248	NC_000014.9	scaffold_0	99.22		True
fake: scaffold gap size wrong estimation (local)
34079868	34094974	71567277	71552173	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
34047473	34078812	71599669	71568337	NC_000014.9	scaffold_0	99.71		True
fake: scaffold gap size wrong estimation (local)
34027589	34047373	71619873	71600168	NC_000014.9	scaffold_0	99.52		True
fake: scaffold gap size wrong estimation (local)
34018052	34027069	71629935	71620662	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
34015231	34017179	71632631	71630688	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
33985035	34014597	71662896	71633291	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
33961507	33983969	71686593	71664112	NC_000014.9	scaffold_0	99.65		True
fake: scaffold gap size wrong estimation (local)
33939336	33961157	71708786	71686967	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
33936821	33939233	71711355	71708943	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
33896294	33935969	71751854	71712140	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
33854348	33896086	71793765	71752037	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
33831574	33853648	71816555	71794494	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
33828853	33830221	71819118	71817750	NC_000014.9	scaffold_0	99.2		True
fake: scaffold gap size wrong estimation (local)
33789800	33827534	71857777	71820371	NC_000014.9	scaffold_0	98.86		True
fake: scaffold gap size wrong estimation (local)
33785435	33789595	71862158	71858000	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
33328491	33784740	72319147	71862864	NC_000014.9	scaffold_0	99.9		True
indel: indel (> 5bp)
33113773	33328460	72533944	72319250	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
33092774	33112325	72554693	72535171	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
33089724	33091721	72557620	72555623	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
32939134	33089425	72708133	72557990	NC_000014.9	scaffold_0	99.7		True
fake: scaffold gap size wrong estimation (local)
32922322	32938784	72725038	72708469	NC_000014.9	scaffold_0	99.0		True
fake: scaffold gap size wrong estimation (local)
32919730	32921535	72727328	72725523	NC_000014.9	scaffold_0	99.89		True
local misassembly
32920965	32922514	72728879	72727329	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
32918083	32919655	72731543	72729971	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
32907320	32917291	72742516	72732514	NC_000014.9	scaffold_0	99.61		True
fake: scaffold gap size wrong estimation (local)
32862943	32907036	72786950	72742791	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
32859385	32862447	72790746	72787333	NC_000014.9	scaffold_0	97.97		True
fake: scaffold gap size wrong estimation (local)
32849947	32851188	72799650	72798409	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
32847091	32849179	72802548	72800460	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
32842035	32846584	72807603	72803060	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
32786531	32841798	72863054	72807880	NC_000014.9	scaffold_0	99.6		True
indel: indel (> 5bp)
32750892	32786325	72898644	72863205	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
32583686	32750633	73065954	72898853	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
32522500	32581018	73127376	73069042	NC_000014.9	scaffold_0	99.66		True
fake: scaffold gap size wrong estimation (local)
32454835	32519945	73195455	73130372	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
32356551	32453593	73293628	73196625	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
32354190	32356128	73296110	73294172	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
32352267	32353712	73298182	73296737	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
32349657	32351020	73300860	73299497	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
32347109	32348311	73303367	73302165	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
32292815	32346162	73357826	73304478	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
32239117	32292637	73411582	73358054	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
32217224	32234899	73433875	73416210	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
32214887	32217041	73436372	73434218	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
32199796	32214309	73451526	73437015	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
32194065	32199692	73457404	73451770	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
32133246	32193916	73518193	73457547	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
32130587	32131979	73520686	73519294	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
32127887	32130218	73523419	73521148	NC_000014.9	scaffold_0	97.38		True
local misassembly
32116414	32127947	73535010	73523476	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
32032625	32115464	73618726	73535841	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
31980800	32032455	73670434	73618828	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
31958980	31979877	73692204	73671299	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
31918744	31958571	73732025	73692557	NC_000014.9	scaffold_0	98.87		True
fake: scaffold gap size wrong estimation (local)
31869308	31918438	73781359	73732241	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
31842020	31868134	73808565	73782448	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
31817376	31841741	73833196	73808799	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
31811177	31815132	73838975	73835024	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
31809196	31810958	73841035	73839273	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
31799264	31807020	73850636	73842880	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
31759179	31793840	73890466	73855805	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
31757268	31758975	73892380	73890673	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
31750367	31754608	73898804	73894561	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
31745379	31750180	73903790	73898990	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
31743640	31745031	73905701	73904313	NC_000014.9	scaffold_0	99.71		True
fake: scaffold gap size wrong estimation (local)
31739253	31743468	73910169	73905953	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
31733472	31739076	73916437	73910441	NC_000014.9	scaffold_0	97.25		True
fake: scaffold gap size wrong estimation (local)
31712323	31732085	73937541	73917771	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
31705968	31711839	73943989	73938064	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
31704119	31705778	73945868	73944209	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
31701356	31703607	73948654	73946403	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
31666668	31701138	73983450	73948977	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
31649508	31666231	74000616	73983897	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
31639892	31648918	74010131	74001215	NC_000014.9	scaffold_0	98.7		True
fake: scaffold gap size wrong estimation (local)
31617633	31634441	74032409	74015601	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
31604430	31616591	74045504	74033341	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
31602460	31604299	74047509	74045672	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
31574902	31600803	74074790	74048895	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
31559881	31574601	74089756	74075037	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
31513888	31559640	74135686	74089992	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
31481108	31512655	74168609	74136745	NC_000014.9	scaffold_0	99.61		True
fake: scaffold gap size wrong estimation (local)
31474047	31480928	74175667	74168786	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
31468489	31473825	74181190	74175854	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
31445394	31467501	74204198	74182125	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
31443824	31445194	74205807	74204437	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
31438049	31443462	74211681	74206275	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
31422469	31436619	74227166	74213026	NC_000014.9	scaffold_0	99.7		True
fake: scaffold gap size wrong estimation (local)
31409156	31421904	74240505	74227754	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
31344847	31408944	74304761	74240719	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
31278592	31344407	74370672	74305011	NC_000014.9	scaffold_0	99.52		True
fake: scaffold gap size wrong estimation (local)
31276761	31278018	74372531	74371274	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
31250962	31276662	74398472	74372690	NC_000014.9	scaffold_0	99.56		True
fake: scaffold gap size wrong estimation (local)
31246492	31247860	74402154	74400786	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
31233091	31246304	74415559	74402337	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
31218993	31232778	74429674	74415913	NC_000014.9	scaffold_0	99.58		True
fake: scaffold gap size wrong estimation (local)
31214968	31218103	74433693	74430556	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
31192336	31214065	74456341	74434630	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
31179361	31191868	74469254	74456741	NC_000014.9	scaffold_0	99.79		True
local misassembly
31137126	31179967	74512054	74469256	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
31082862	31136836	74566267	74512323	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
31073486	31082707	74575596	74566386	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
31046177	31073255	74602912	74575808	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
31040149	31045662	74608909	74603354	NC_000014.9	scaffold_0	99.19		True
fake: scaffold gap size wrong estimation (local)
31034688	31039683	74614116	74609121	NC_000014.9	scaffold_0	99.94		True
indel: indel (> 5bp)
31018136	31034630	74631005	74614250	NC_000014.9	scaffold_0	98.49		True
fake: scaffold gap size wrong estimation (local)
31010374	31016613	74638786	74632556	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
31005156	31009699	74643920	74639379	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
30985308	31002174	74663860	74646976	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
30977852	30984135	74671312	74665024	NC_000014.9	scaffold_0	99.65		True
fake: scaffold gap size wrong estimation (local)
30968457	30977558	74680810	74671711	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
30960918	30968301	74688448	74681063	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
30949476	30960686	74699915	74688698	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
30859949	30949383	74789394	74700041	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
30838496	30858729	74810895	74790604	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
30816486	30838221	74832869	74811147	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
30768385	30816314	74880508	74832987	NC_000014.9	scaffold_0	99.06		True
fake: scaffold gap size wrong estimation (local)
30731920	30768169	74917005	74880737	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
30690470	30730608	74958433	74918271	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
30668440	30684765	74981125	74964800	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
30479899	30666702	75169749	74982617	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
30416755	30474463	75234291	75176555	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
30413832	30416477	75237164	75234519	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
30369400	30413635	75281613	75237359	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
30269671	30363162	75382207	75288621	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
30175611	30269420	75476196	75382462	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
30143181	30173895	75508420	75477703	NC_000014.9	scaffold_0	99.87		True
indel: indel (> 5bp)
30065791	30143156	75585745	75508497	NC_000014.9	scaffold_0	99.68		True
fake: scaffold gap size wrong estimation (local)
30008261	30065352	75643232	75586139	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
29946099	30008041	75705308	75643418	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
29826897	29945940	75824374	75705399	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
29780165	29826247	75871038	75824709	NC_000014.9	scaffold_0	99.43		True
fake: scaffold gap size wrong estimation (local)
29778054	29779838	75873055	75871271	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
29728021	29777414	75923056	75873661	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
29621220	29727469	76029677	75923533	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
29481356	29619970	76169550	76031000	NC_000014.9	scaffold_0	99.58		True
fake: scaffold gap size wrong estimation (local)
29466396	29478239	76184676	76172839	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
29334673	29466171	76316409	76184935	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
29259527	29333603	76391398	76317368	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
29251977	29258843	76398469	76391610	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
29046349	29250313	76603994	76400027	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
29018106	29046237	76632207	76604079	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
29005349	29017787	76644885	76632448	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
28994837	29001908	76654675	76647604	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
28829884	28993733	76819835	76655750	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
28809282	28829620	76840401	76820013	NC_000014.9	scaffold_0	99.61		True
indel: indel (<= 5bp)
28792579	28809235	76857102	76840444	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
28767622	28792418	76882039	76857248	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
28748610	28767158	76901012	76882461	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
28734210	28747648	76915375	76901933	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
28665012	28733103	76984503	76916423	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
28641558	28664105	77007866	76985315	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
28610982	28637431	77038264	77011838	NC_000014.9	scaffold_0	99.86		True
fake: scaffold gap size wrong estimation (local)
28549291	28610840	77099899	77038366	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
28546165	28548428	77102887	77100624	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
28540195	28543547	77108403	77105051	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
28527439	28539965	77121068	77108530	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
28487197	28525819	77161180	77122555	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
28476250	28487048	77172075	77161286	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
28471290	28474690	77176975	77173576	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
28415771	28470497	77232408	77177730	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
28402885	28412877	77244757	77234720	NC_000014.9	scaffold_0	99.54		True
fake: scaffold gap size wrong estimation (local)
28376434	28402237	77271298	77245550	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
28332264	28375771	77315624	77271856	NC_000014.9	scaffold_0	99.3		True
fake: scaffold gap size wrong estimation (local)
28318465	28331203	77329412	77316666	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
28293124	28312784	77356345	77336677	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
28278111	28292955	77371377	77356531	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
28272943	28277912	77376475	77371506	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
28241740	28271409	77407560	77377835	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
28222460	28241449	77426791	77407803	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
28194597	28221738	77454655	77427502	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
28179770	28188516	77472143	77463397	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
28149676	28178061	77502021	77473639	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
28139919	28147957	77511619	77503589	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
28120295	28139291	77531023	77512258	NC_000014.9	scaffold_0	98.63		True
fake: scaffold gap size wrong estimation (local)
28113168	28120002	77538151	77531317	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
28075525	28111620	77575862	77539761	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
28053569	28074721	77597593	77576550	NC_000014.9	scaffold_0	99.32		True
fake: scaffold gap size wrong estimation (local)
28031695	28053046	77619404	77598056	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
28011864	28031372	77639277	77619773	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
27988822	28011606	77662331	77639548	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
27986979	27988487	77664152	77662644	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
27985122	27986626	77666143	77664639	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
27949674	27984906	77701606	77666374	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
27859617	27949477	77791865	77701838	NC_000014.9	scaffold_0	99.68		True
fake: scaffold gap size wrong estimation (local)
27847271	27859318	77804131	77792222	NC_000014.9	scaffold_0	98.79		True
fake: scaffold gap size wrong estimation (local)
27843747	27846989	77807641	77804399	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
27840991	27842854	77810321	77808470	NC_000014.9	scaffold_0	99.36		True
fake: scaffold gap size wrong estimation (local)
27838689	27840578	77812605	77810716	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
27822355	27838262	77828837	77812945	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
27779440	27822124	77871778	77829086	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
27767408	27779229	77883737	77871928	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
27678777	27767317	77972321	77883841	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
27515555	27673478	78133894	77976136	NC_000014.9	scaffold_0	99.69		True
fake: scaffold gap size wrong estimation (local)
27513206	27515112	78136120	78134213	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
27495394	27512959	78153816	78136252	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
27486388	27492437	78162532	78156483	NC_000014.9	scaffold_0	99.87		True
indel: indel (<= 5bp)
27485280	27485931	78163644	78162993	NC_000014.9	scaffold_0	99.85		True
indel: indel (> 5bp)
27477502	27484822	78171428	78164108	NC_000014.9	scaffold_0	99.9		True
indel: indel (<= 5bp)
27471681	27477499	78177247	78171429	NC_000014.9	scaffold_0	99.95		True
indel: indel (<= 5bp)
27462496	27471680	78186436	78177252	NC_000014.9	scaffold_0	99.9		True
local misassembly
27450507	27458945	78194875	78186437	NC_000014.9	scaffold_0	99.87		True
indel: indel (<= 5bp)
27447064	27450506	78198320	78194878	NC_000014.9	scaffold_0	99.91		True
indel: indel (<= 5bp)
27442358	27447016	78203029	78198371	NC_000014.9	scaffold_0	99.91		True
indel: indel (<= 5bp)
27441140	27442323	78204251	78203068	NC_000014.9	scaffold_0	99.75		True
indel: indel (> 5bp)
27434660	27441093	78210685	78204252	NC_000014.9	scaffold_0	99.95		True
indel: indel (<= 5bp)
27431575	27434486	78213767	78210856	NC_000014.9	scaffold_0	99.73		True
local misassembly
27409244	27430804	78236460	78214900	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
27361258	27409083	78284437	78236611	NC_000014.9	scaffold_0	99.63		True
fake: scaffold gap size wrong estimation (local)
27359025	27360310	78286678	78285393	NC_000014.9	scaffold_0	99.53		True
fake: scaffold gap size wrong estimation (local)
27299359	27357981	78346429	78287753	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
27265595	27299091	78380396	78346822	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
27240797	27264463	78405066	78381399	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
27171060	27240033	78474815	78405839	NC_000014.9	scaffold_0	99.88		True
fake: scaffold gap size wrong estimation (local)
27106010	27168499	78539398	78476869	NC_000014.9	scaffold_0	99.74		True
fake: scaffold gap size wrong estimation (local)
27097916	27105570	78547411	78539756	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
27047814	27097406	78597536	78547940	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
26950830	27044301	78697589	78604259	NC_000014.9	scaffold_0	99.6		True
fake: scaffold gap size wrong estimation (local)
26906463	26950563	78741816	78697748	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
26843734	26906376	78804200	78741933	NC_000014.9	scaffold_0	99.26		True
fake: scaffold gap size wrong estimation (local)
26763439	26843564	78884128	78804291	NC_000014.9	scaffold_0	99.48		True
indel: indel (> 5bp)
26726198	26763385	78921400	78884191	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
26693556	26725505	78954080	78922027	NC_000014.9	scaffold_0	99.4		True
fake: scaffold gap size wrong estimation (local)
26689484	26693375	78958154	78954263	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
26678886	26688900	78968608	78958627	NC_000014.9	scaffold_0	99.51		True
fake: scaffold gap size wrong estimation (local)
26634950	26673445	79013438	78974919	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
26496826	26628786	79151847	79019889	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
26430544	26495624	79218089	79153003	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
26409428	26430356	79239207	79218279	NC_000014.9	scaffold_0	99.98		True
fake: scaffold gap size wrong estimation (local)
26386605	26409191	79262077	79239508	NC_000014.9	scaffold_0	99.82		True
fake: scaffold gap size wrong estimation (local)
26384026	26386455	79264668	79262239	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
26368341	26383833	79280355	79264864	NC_000014.9	scaffold_0	99.81		True
fake: scaffold gap size wrong estimation (local)
26310129	26368203	79338865	79280463	NC_000014.9	scaffold_0	99.23		True
fake: scaffold gap size wrong estimation (local)
26300415	26309448	79348567	79339530	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
26268652	26294917	79380729	79354460	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
26242445	26266990	79406759	79382238	NC_000014.9	scaffold_0	99.46		True
fake: scaffold gap size wrong estimation (local)
26216125	26242180	79432795	79407075	NC_000014.9	scaffold_0	98.6		True
fake: scaffold gap size wrong estimation (local)
26114403	26215793	79534611	79433123	NC_000014.9	scaffold_0	99.8		True
fake: scaffold gap size wrong estimation (local)
26112704	26113645	79536382	79535441	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
26100125	26106891	79548940	79542174	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
26006692	26099746	79642303	79549278	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
25991577	26006516	79657375	79642434	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
25974969	25990720	79673942	79658186	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
25963388	25974662	79685477	79674203	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
25948874	25960602	79701271	79689543	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
25868100	25947601	79781972	79702464	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
25856086	25866261	79793555	79783404	NC_000014.9	scaffold_0	99.71		True
fake: scaffold gap size wrong estimation (local)
25784602	25852397	79865075	79797320	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
25762203	25771469	79886183	79876917	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
25735089	25762114	79913305	79886291	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
25720322	25734951	79928006	79913375	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
25704365	25719638	79943952	79928627	NC_000014.9	scaffold_0	99.89		True
fake: scaffold gap size wrong estimation (local)
25671360	25703676	79976660	79944527	NC_000014.9	scaffold_0	99.33		True
fake: scaffold gap size wrong estimation (local)
25474957	25671057	80172965	79976885	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
25450042	25473458	80197851	80174442	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
25419903	25449915	80228108	80197972	NC_000014.9	scaffold_0	99.15		True
fake: scaffold gap size wrong estimation (local)
25410545	25417126	80237058	80230476	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
25405327	25410135	80242034	80237226	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
25369581	25404711	80277662	80242528	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
25366043	25367710	80280895	80279228	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
25361375	25365178	80285325	80281522	NC_000014.9	scaffold_0	99.97		True
fake: scaffold gap size wrong estimation (local)
25338270	25360514	80308426	80286168	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
25336243	25337476	80310558	80309325	NC_000014.9	scaffold_0	99.84		True
fake: scaffold gap size wrong estimation (local)
25324799	25336152	80322372	80311020	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
25307553	25324184	80339586	80322955	NC_000014.9	scaffold_0	99.59		True
fake: scaffold gap size wrong estimation (local)
25290856	25306371	80356287	80340813	NC_000014.9	scaffold_0	99.61		True
fake: scaffold gap size wrong estimation (local)
25275222	25290649	80371856	80356508	NC_000014.9	scaffold_0	99.39		True
fake: scaffold gap size wrong estimation (local)
25267263	25274664	80379819	80372418	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
25221951	25266965	80425196	80380160	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
25210636	25221460	80436417	80425596	NC_000014.9	scaffold_0	99.9		True
fake: scaffold gap size wrong estimation (local)
25189205	25204083	80458407	80443531	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
25180217	25185908	80468725	80463033	NC_000014.9	scaffold_0	99.7		True
fake: scaffold gap size wrong estimation (local)
25173140	25179975	80475748	80468912	NC_000014.9	scaffold_0	99.93		True
fake: scaffold gap size wrong estimation (local)
25129916	25170547	80523559	80482479	NC_000014.9	scaffold_0	98.63		True
indel: indel (> 5bp)
25125100	25129843	80528380	80523639	NC_000014.9	scaffold_0	99.83		True
fake: scaffold gap size wrong estimation (local)
25116711	25125014	80536779	80528476	NC_000014.9	scaffold_0	99.96		True
fake: scaffold gap size wrong estimation (local)
25044255	25116628	80609209	80536909	NC_000014.9	scaffold_0	99.72		True
indel: stretch of mismatches
24882399	25044218	80770851	80609246	NC_000014.9	scaffold_0	99.63		True
fake: scaffold gap size wrong estimation (local)
24765074	24882176	80888191	80771054	NC_000014.9	scaffold_0	99.85		True
fake: scaffold gap size wrong estimation (local)
24754068	24762547	80898860	80890381	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
24751682	24753925	80901419	80899173	NC_000014.9	scaffold_0	99.87		True
fake: scaffold gap size wrong estimation (local)
24719737	24750636	80933356	80902359	NC_000014.9	scaffold_0	99.46		True
fake: scaffold gap size wrong estimation (local)
24697929	24719533	80955152	80933509	NC_000014.9	scaffold_0	99.78		True
fake: scaffold gap size wrong estimation (local)
24632501	24696218	81020653	80956932	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
24620397	24632190	81032714	81020923	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
24585053	24620225	81068035	81032864	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
24569128	24584531	81084123	81068721	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
24552242	24568933	81101031	81084288	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
24531923	24551945	81121320	81101302	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
24520952	24527949	81132375	81125379	NC_000014.9	scaffold_0	99.77		True
fake: scaffold gap size wrong estimation (local)
24497557	24519409	81155590	81133752	NC_000014.9	scaffold_0	99.6		True
fake: scaffold gap size wrong estimation (local)
24495550	24496962	81157599	81156186	NC_000014.9	scaffold_0	99.15		True
fake: scaffold gap size wrong estimation (local)
24490043	24494427	81163132	81158748	NC_000014.9	scaffold_0	99.48		True
fake: scaffold gap size wrong estimation (local)
24449699	24485186	81203899	81168258	NC_000014.9	scaffold_0	98.79		True
fake: scaffold gap size wrong estimation (local)
24444135	24448249	81209321	81205202	NC_000014.9	scaffold_0	99.25		True
fake: scaffold gap size wrong estimation (local)
24357059	24443925	81296104	81209430	NC_000014.9	scaffold_0	99.64		True
fake: scaffold gap size wrong estimation (local)
24326908	24356531	81326362	81296745	NC_000014.9	scaffold_0	99.76		True
fake: scaffold gap size wrong estimation (local)
24303464	24326618	81349775	81326630	NC_000014.9	scaffold_0	99.85		True
indel: indel (<= 5bp)
24286108	24303402	81367161	81349835	NC_000014.9	scaffold_0	99.73		True
fake: scaffold gap size wrong estimation (local)
24273422	24285994	81379827	81367254	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
24230624	24273195	81422722	81380072	NC_000014.9	scaffold_0	99.79		True
fake: scaffold gap size wrong estimation (local)
24205510	24230390	81447938	81422936	NC_000014.9	scaffold_0	99.72		True
fake: scaffold gap size wrong estimation (local)
24159587	24205315	81493714	81448122	NC_000014.9	scaffold_0	99.56		True
fake: scaffold gap size wrong estimation (local)
24122492	24158860	81530741	81494400	NC_000014.9	scaffold_0	99.91		True
fake: scaffold gap size wrong estimation (local)
24113303	24122171	81539890	81531022	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
24097592	24111810	81555509	81541291	NC_000014.9	scaffold_0	99.99		True
fake: scaffold gap size wrong estimation (local)
24091222	24096251	81561777	81556748	NC_000014.9	scaffold_0	99.94		True
fake: scaffold gap size wrong estimation (local)
24043790	24090270	81609199	81562721	NC_000014.9	scaffold_0	99.95		True
fake: scaffold gap size wrong estimation (local)
24039458	24043687	81613616	81609387	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
24030434	24039265	81622557	81613729	NC_000014.9	scaffold_0	99.95		True
relocation, inconsistency = 40158
23989075	23990274	81623758	81622559	NC_000014.9	scaffold_0	99.92		True
fake: scaffold gap size wrong estimation (local)
23980051	23988017	81632756	81624793	NC_000014.9	scaffold_0	99.71		True
fake: scaffold gap size wrong estimation (local)
23977670	23978882	81635269	81634057	NC_000014.9	scaffold_0	98.35		True
fake: scaffold gap size wrong estimation (local)
23975457	23976611	81637562	81636408	NC_000014.9	scaffold_0	100.0		True
fake: scaffold gap size wrong estimation (local)
23973691	23975262	81639334	81637762	NC_000014.9	scaffold_0	99.11		True
relocation, scaffold gap is present, inconsistency = -42571
24008665	24015176	81646936	81640420	NC_000014.9	scaffold_0	99.34		True
CONTIG	scaffold_0	81646936	misassembled
20240815	20242307	1	1493	NC_000014.9	scaffold_1	99.53		True
local misassembly
20239581	20240758	1495	2672	NC_000014.9	scaffold_1	100.0		True
fake: scaffold gap size wrong estimation (local)
20242329	20249185	4138	10993	NC_000014.9	scaffold_1	99.87		True
fake: scaffold gap size wrong estimation (local)
20250179	20265039	11918	26778	NC_000014.9	scaffold_1	99.97		True
fake: scaffold gap size wrong estimation (local)
20267141	20279665	28622	41125	NC_000014.9	scaffold_1	99.61		True
fake: scaffold gap size wrong estimation (local)
20286024	20309470	47372	70800	NC_000014.9	scaffold_1	99.79		True
fake: scaffold gap size wrong estimation (local)
20311301	20314982	72410	76090	NC_000014.9	scaffold_1	99.92		True
fake: scaffold gap size wrong estimation (local)
20315143	20323718	76192	84767	NC_000014.9	scaffold_1	99.97		True
fake: scaffold gap size wrong estimation (local)
20323921	20347367	85081	108523	NC_000014.9	scaffold_1	99.97		True
fake: scaffold gap size wrong estimation (local)
20347427	20450929	108645	212150	NC_000014.9	scaffold_1	99.82		True
fake: scaffold gap size wrong estimation (local)
20451554	20488011	212671	249074	NC_000014.9	scaffold_1	99.82		True
fake: scaffold gap size wrong estimation (local)
20488286	20504611	249331	265772	NC_000014.9	scaffold_1	99.2		True
fake: scaffold gap size wrong estimation (local)
20507485	20540765	268626	301930	NC_000014.9	scaffold_1	99.73		True
fake: scaffold gap size wrong estimation (local)
20540983	20618883	302146	380025	NC_000014.9	scaffold_1	99.85		True
fake: scaffold gap size wrong estimation (local)
20619586	20649622	380702	410749	NC_000014.9	scaffold_1	99.88		True
fake: scaffold gap size wrong estimation (local)
20649832	20689952	410967	451090	NC_000014.9	scaffold_1	99.83		True
fake: scaffold gap size wrong estimation (local)
20690222	20718364	451320	479465	NC_000014.9	scaffold_1	99.88		True
fake: scaffold gap size wrong estimation (local)
20718623	20729416	479733	490526	NC_000014.9	scaffold_1	99.97		True
fake: scaffold gap size wrong estimation (local)
20729568	20731990	490641	493063	NC_000014.9	scaffold_1	99.96		True
fake: scaffold gap size wrong estimation (local)
20732335	20734055	493520	495241	NC_000014.9	scaffold_1	99.83		True
fake: scaffold gap size wrong estimation (local)
20734739	20745344	495686	506293	NC_000014.9	scaffold_1	99.86		True
fake: scaffold gap size wrong estimation (local)
20745526	20754009	506432	514914	NC_000014.9	scaffold_1	99.75		True
fake: scaffold gap size wrong estimation (local)
20754293	20779234	515177	540085	NC_000014.9	scaffold_1	99.74		True
fake: scaffold gap size wrong estimation (local)
20779596	20782686	540446	543550	NC_000014.9	scaffold_1	99.29		True
fake: scaffold gap size wrong estimation (local)
20783526	20785513	544339	546330	NC_000014.9	scaffold_1	99.8		True
fake: scaffold gap size wrong estimation (local)
20786161	20787564	546998	548400	NC_000014.9	scaffold_1	99.86		True
fake: scaffold gap size wrong estimation (local)
20788164	20789590	549143	550569	NC_000014.9	scaffold_1	99.86		True
fake: scaffold gap size wrong estimation (local)
20789958	20791413	551290	552745	NC_000014.9	scaffold_1	99.66		True
fake: scaffold gap size wrong estimation (local)
20791971	20795360	553618	557004	NC_000014.9	scaffold_1	99.5		True
fake: scaffold gap size wrong estimation (local)
20797774	20838603	559100	599964	NC_000014.9	scaffold_1	99.73		True
fake: scaffold gap size wrong estimation (local)
20838895	20839993	600293	601391	NC_000014.9	scaffold_1	100.0		True
fake: scaffold gap size wrong estimation (local)
20840912	20847013	602406	608509	NC_000014.9	scaffold_1	99.79		True
fake: scaffold gap size wrong estimation (local)
20847682	20862265	609147	623719	NC_000014.9	scaffold_1	99.74		True
fake: scaffold gap size wrong estimation (local)
20865283	20883912	625619	644256	NC_000014.9	scaffold_1	99.69		True
fake: scaffold gap size wrong estimation (local)
20884389	20911733	644553	671861	NC_000014.9	scaffold_1	99.63		True
fake: scaffold gap size wrong estimation (local)
20916615	20944828	675217	703428	NC_000014.9	scaffold_1	99.91		True
fake: scaffold gap size wrong estimation (local)
20949398	20969948	708606	729254	NC_000014.9	scaffold_1	99.42		True
fake: scaffold gap size wrong estimation (local)
20970469	20985309	729780	744622	NC_000014.9	scaffold_1	99.85		True
fake: scaffold gap size wrong estimation (local)
20985743	21067785	745047	827136	NC_000014.9	scaffold_1	99.82		True
fake: scaffold gap size wrong estimation (local)
21068335	21098191	827460	857302	NC_000014.9	scaffold_1	99.86		True
fake: scaffold gap size wrong estimation (local)
21098508	21130682	857589	889783	NC_000014.9	scaffold_1	99.82		True
fake: scaffold gap size wrong estimation (local)
21131585	21138484	890645	897536	NC_000014.9	scaffold_1	99.68		True
fake: scaffold gap size wrong estimation (local)
21138997	21161432	898048	920464	NC_000014.9	scaffold_1	99.75		True
fake: scaffold gap size wrong estimation (local)
21162623	21164561	921710	923648	NC_000014.9	scaffold_1	99.74		True
fake: scaffold gap size wrong estimation (local)
21165123	21177752	924112	936741	NC_000014.9	scaffold_1	99.98		True
fake: scaffold gap size wrong estimation (local)
21178212	21183011	937170	941972	NC_000014.9	scaffold_1	99.87		True
fake: scaffold gap size wrong estimation (local)
21183581	21185517	942848	944784	NC_000014.9	scaffold_1	100.0		True
fake: scaffold gap size wrong estimation (local)
21186061	21188415	945355	947709	NC_000014.9	scaffold_1	99.92		True
fake: scaffold gap size wrong estimation (local)
21189344	21194078	948511	953247	NC_000014.9	scaffold_1	99.96		True
fake: scaffold gap size wrong estimation (local)
21194231	21218685	953429	977843	NC_000014.9	scaffold_1	99.77		True
fake: scaffold gap size wrong estimation (local)
21219109	21229104	978288	988269	NC_000014.9	scaffold_1	99.82		True
fake: scaffold gap size wrong estimation (local)
21229371	21249384	988546	1008559	NC_000014.9	scaffold_1	99.97		True
fake: scaffold gap size wrong estimation (local)
21249594	21259897	1008745	1019044	NC_000014.9	scaffold_1	99.92		True
fake: scaffold gap size wrong estimation (local)
21260359	21276305	1019824	1035755	NC_000014.9	scaffold_1	99.84		True
fake: scaffold gap size wrong estimation (local)
21277460	21279877	1036747	1039164	NC_000014.9	scaffold_1	100.0		True
fake: scaffold gap size wrong estimation (local)
21280488	21282366	1039760	1041641	NC_000014.9	scaffold_1	99.79		True
fake: scaffold gap size wrong estimation (local)
21282687	21290695	1042051	1050060	NC_000014.9	scaffold_1	99.98		True
fake: scaffold gap size wrong estimation (local)
21291001	21292331	1050623	1051953	NC_000014.9	scaffold_1	100.0		True
fake: scaffold gap size wrong estimation (local)
21294054	21295499	1053623	1055061	NC_000014.9	scaffold_1	99.45		True
fake: scaffold gap size wrong estimation (local)
21296953	21298807	1056532	1058398	NC_000014.9	scaffold_1	99.3		True
fake: scaffold gap size wrong estimation (local)
21298952	21313959	1058625	1073331	NC_000014.9	scaffold_1	97.42		True
fake: scaffold gap size wrong estimation (local)
21316000	21331133	1075228	1090362	NC_000014.9	scaffold_1	99.92		True
fake: scaffold gap size wrong estimation (local)
21332126	21337006	1091369	1096247	NC_000014.9	scaffold_1	99.96		True
fake: scaffold gap size wrong estimation (local)
21338342	21348739	1097561	1107932	NC_000014.9	scaffold_1	99.65		True
fake: scaffold gap size wrong estimation (local)
21349069	21387666	1108179	1146764	NC_000014.9	scaffold_1	99.92		True
fake: scaffold gap size wrong estimation (local)
21387722	21427414	1146844	1186452	NC_000014.9	scaffold_1	99.77		True
fake: scaffold gap size wrong estimation (local)
21427760	21442800	1186795	1201836	NC_000014.9	scaffold_1	99.99		True
fake: scaffold gap size wrong estimation (local)
21443858	21445502	1202768	1204412	NC_000014.9	scaffold_1	100.0		True
fake: scaffold gap size wrong estimation (local)
21445694	21447356	1204795	1206457	NC_000014.9	scaffold_1	100.0		True
fake: scaffold gap size wrong estimation (local)
21447569	21448798	1206953	1208182	NC_000014.9	scaffold_1	100.0		True
fake: scaffold gap size wrong estimation (local)
21449092	21456915	1208479	1216295	NC_000014.9	scaffold_1	99.91		True
fake: scaffold gap size wrong estimation (local)
21457842	21470998	1217125	1230282	NC_000014.9	scaffold_1	99.95		True
fake: scaffold gap size wrong estimation (local)
21471715	21478870	1230941	1238092	NC_000014.9	scaffold_1	99.8		True
fake: scaffold gap size wrong estimation (local)
21479699	21489637	1238848	1248784	NC_000014.9	scaffold_1	99.82		True
fake: scaffold gap size wrong estimation (local)
21489828	21491733	1249070	1250975	NC_000014.9	scaffold_1	99.79		True
fake: scaffold gap size wrong estimation (local)
21492022	21494632	1251343	1253952	NC_000014.9	scaffold_1	99.85		True
fake: scaffold gap size wrong estimation (local)
21496246	21540218	1255511	1299467	NC_000014.9	scaffold_1	99.83		True
fake: scaffold gap size wrong estimation (local)
21540975	21544416	1300145	1303574	NC_000014.9	scaffold_1	99.65		True
fake: scaffold gap size wrong estimation (local)
21546178	21549201	1305167	1308190	NC_000014.9	scaffold_1	99.93		True
fake: scaffold gap size wrong estimation (local)
21549385	21552093	1308458	1311159	NC_000014.9	scaffold_1	99.63		True
fake: scaffold gap size wrong estimation (local)
21552897	21562803	1311992	1321903	NC_000014.9	scaffold_1	99.81		True
fake: scaffold gap size wrong estimation (local)
21563667	21583054	1322725	1342119	NC_000014.9	scaffold_1	99.84		True
fake: scaffold gap size wrong estimation (local)
21584077	21593834	1342987	1352738	NC_000014.9	scaffold_1	99.89		True
fake: scaffold gap size wrong estimation (local)
21594893	21605984	1353811	1364897	NC_000014.9	scaffold_1	99.62		True
fake: scaffold gap size wrong estimation (local)
21606232	21611051	1365156	1369975	NC_000014.9	scaffold_1	99.09		True
fake: scaffold gap size wrong estimation (local)
21612474	21632331	1371442	1391300	NC_000014.9	scaffold_1	99.83		True
fake: scaffold gap size wrong estimation (local)
21632670	21634085	1391682	1393097	NC_000014.9	scaffold_1	100.0		True
fake: scaffold gap size wrong estimation (local)
21634457	21637138	1393496	1396180	NC_000014.9	scaffold_1	99.74		True
fake: scaffold gap size wrong estimation (local)
21637374	21646723	1396419	1405978	NC_000014.9	scaffold_1	98.68		True
fake: scaffold gap size wrong estimation (local)
21647006	21693278	1406386	1452719	NC_000014.9	scaffold_1	99.77		True
fake: scaffold gap size wrong estimation (local)
21693394	21698300	1452776	1457683	NC_000014.9	scaffold_1	99.67		True
fake: scaffold gap size wrong estimation (local)
21698585	21755758	1457903	1515075	NC_000014.9	scaffold_1	99.72		True
fake: scaffold gap size wrong estimation (local)
21759769	21762880	1519484	1522596	NC_000014.9	scaffold_1	99.23		True
fake: scaffold gap size wrong estimation (local)
21763357	21786672	1522990	1546200	NC_000014.9	scaffold_1	99.25		True
fake: scaffold gap size wrong estimation (local)
21787280	21805246	1546775	1564650	NC_000014.9	scaffold_1	99.36		True
fake: scaffold gap size wrong estimation (local)
21805946	21814002	1565387	1573439	NC_000014.9	scaffold_1	99.75		True
fake: scaffold gap size wrong estimation (local)
21814733	21853083	1574182	1612540	NC_000014.9	scaffold_1	99.71		True
fake: scaffold gap size wrong estimation (local)
21854514	21855681	1614062	1615229	NC_000014.9	scaffold_1	99.91		True
fake: scaffold gap size wrong estimation (local)
21856328	21883589	1615707	1642975	NC_000014.9	scaffold_1	99.89		True
fake: scaffold gap size wrong estimation (local)
21884716	21886945	1644065	1646294	NC_000014.9	scaffold_1	99.91		True
fake: scaffold gap size wrong estimation (local)
21887297	21889215	1646627	1648535	NC_000014.9	scaffold_1	99.43		True
fake: scaffold gap size wrong estimation (local)
21889623	21892605	1649092	1652076	NC_000014.9	scaffold_1	99.83		True
fake: scaffold gap size wrong estimation (local)
21901153	21902788	1660337	1661972	NC_000014.9	scaffold_1	99.76		True
fake: scaffold gap size wrong estimation (local)
21904479	21910360	1663547	1669429	NC_000014.9	scaffold_1	99.76		True
fake: scaffold gap size wrong estimation (local)
21910655	21924073	1669626	1683039	NC_000014.9	scaffold_1	99.84		True
fake: scaffold gap size wrong estimation (local)
21924785	21926159	1683797	1685171	NC_000014.9	scaffold_1	99.93		True
fake: scaffold gap size wrong estimation (local)
21926364	21975341	1685315	1734326	NC_000014.9	scaffold_1	99.89		True
fake: scaffold gap size wrong estimation (local)
21975593	21980844	1734588	1739840	NC_000014.9	scaffold_1	99.9		True
fake: scaffold gap size wrong estimation (local)
21981851	21995079	1740728	1753955	NC_000014.9	scaffold_1	99.97		True
indel: indel (<= 5bp)
21995156	22005568	1754034	1764448	NC_000014.9	scaffold_1	99.95		True
fake: scaffold gap size wrong estimation (local)
22006577	22032671	1765338	1791433	NC_000014.9	scaffold_1	99.98		True
fake: scaffold gap size wrong estimation (local)
22033356	22034511	1792079	1793234	NC_000014.9	scaffold_1	100.0		True
fake: scaffold gap size wrong estimation (local)
22035010	22052269	1793683	1810947	NC_000014.9	scaffold_1	99.95		True
fake: scaffold gap size wrong estimation (local)
22052793	22054429	1811465	1813101	NC_000014.9	scaffold_1	100.0		True
fake: scaffold gap size wrong estimation (local)
22054778	22056017	1813824	1815063	NC_000014.9	scaffold_1	99.68		True
fake: scaffold gap size wrong estimation (local)
22056165	22145111	1815191	1903893	NC_000014.9	scaffold_1	99.42		True
fake: scaffold gap size wrong estimation (local)
22145737	22147281	1904544	1906088	NC_000014.9	scaffold_1	99.81		True
fake: scaffold gap size wrong estimation (local)
22147639	22161506	1906485	1920513	NC_000014.9	scaffold_1	98.84		True
fake: scaffold gap size wrong estimation (local)
22161967	22169057	1920927	1928017	NC_000014.9	scaffold_1	99.99		True
fake: scaffold gap size wrong estimation (local)
22171246	22244601	1929867	2003199	NC_000014.9	scaffold_1	99.92		True
fake: scaffold gap size wrong estimation (local)
22246198	22256803	2004716	2015329	NC_000014.9	scaffold_1	99.9		True
fake: scaffold gap size wrong estimation (local)
22258455	22350482	2016810	2109361	NC_000014.9	scaffold_1	99.24		True
fake: scaffold gap size wrong estimation (local)
22353799	22366865	2114946	2128013	NC_000014.9	scaffold_1	99.77		True
fake: scaffold gap size wrong estimation (local)
22367956	22423196	2129093	2184904	NC_000014.9	scaffold_1	98.7		True
fake: scaffold gap size wrong estimation (local)
22423471	22457206	2185134	2218872	NC_000014.9	scaffold_1	99.91		True
fake: scaffold gap size wrong estimation (local)
22457331	22504510	2219009	2266225	NC_000014.9	scaffold_1	99.96		True
indel: indel (> 5bp)
22504690	22527797	2266420	2289539	NC_000014.9	scaffold_1	99.74		True
fake: scaffold gap size wrong estimation (local)
22528983	22548588	2290683	2310291	NC_000014.9	scaffold_1	99.96		True
fake: scaffold gap size wrong estimation (local)
22548882	22553190	2310554	2314862	NC_000014.9	scaffold_1	99.91		True
fake: scaffold gap size wrong estimation (local)
22555745	22559838	2316858	2320955	NC_000014.9	scaffold_1	99.71		True
fake: scaffold gap size wrong estimation (local)
22561530	22563066	2322512	2324048	NC_000014.9	scaffold_1	99.87		True
fake: scaffold gap size wrong estimation (local)
22563897	22566123	2324890	2327116	NC_000014.9	scaffold_1	99.95		True
fake: scaffold gap size wrong estimation (local)
22566351	22567939	2327512	2329100	NC_000014.9	scaffold_1	100.0		True
fake: scaffold gap size wrong estimation (local)
22569144	22570430	2330409	2331694	NC_000014.9	scaffold_1	99.92		True
fake: scaffold gap size wrong estimation (local)
22573954	22575013	2336757	2337816	NC_000014.9	scaffold_1	99.91		True
fake: scaffold gap size wrong estimation (local)
22576151	22578070	2338866	2340785	NC_000014.9	scaffold_1	99.95		True
fake: scaffold gap size wrong estimation (local)
22578702	22581749	2341399	2344447	NC_000014.9	scaffold_1	99.84		True
fake: scaffold gap size wrong estimation (local)
22581986	22615806	2344739	2378704	NC_000014.9	scaffold_1	99.43		True
fake: scaffold gap size wrong estimation (local)
22620157	22632718	2380939	2393512	NC_000014.9	scaffold_1	99.86		True
fake: scaffold gap size wrong estimation (local)
22634136	22635060	2395080	2396004	NC_000014.9	scaffold_1	100.0		True
fake: scaffold gap size wrong estimation (local)
22640491	22641210	2397580	2398299	NC_000014.9	scaffold_1	99.72		True
indel: indel (> 5bp)
22641426	22662061	2398489	2419386	NC_000014.9	scaffold_1	99.79		True
fake: scaffold gap size wrong estimation (local)
22662624	22673958	2419852	2431186	NC_000014.9	scaffold_1	99.99		True
fake: scaffold gap size wrong estimation (local)
22682785	22688775	2438892	2444882	NC_000014.9	scaffold_1	100.0		True
local misassembly
22688745	22709097	2445542	2465894	NC_000014.9	scaffold_1	99.94		True
fake: scaffold gap size wrong estimation (local)
22709541	22736238	2466285	2493283	NC_000014.9	scaffold_1	98.7		True
fake: scaffold gap size wrong estimation (local)
22736771	22738680	2493878	2495787	NC_000014.9	scaffold_1	100.0		True
fake: scaffold gap size wrong estimation (local)
22739131	22751946	2496252	2509049	NC_000014.9	scaffold_1	99.48		True
fake: scaffold gap size wrong estimation (local)
22752151	22757550	2509319	2514709	NC_000014.9	scaffold_1	99.8		True
fake: scaffold gap size wrong estimation (local)
22758353	22772327	2515466	2529441	NC_000014.9	scaffold_1	99.82		True
fake: scaffold gap size wrong estimation (local)
22772523	22776736	2529574	2533791	NC_000014.9	scaffold_1	99.88		True
fake: scaffold gap size wrong estimation (local)
22777143	22779373	2534192	2536422	NC_000014.9	scaffold_1	99.87		True
fake: scaffold gap size wrong estimation (local)
22780331	22785725	2537397	2542792	NC_000014.9	scaffold_1	99.93		True
fake: scaffold gap size wrong estimation (local)
22786706	22787933	2543812	2545039	NC_000014.9	scaffold_1	100.0		True
fake: scaffold gap size wrong estimation (local)
22789713	22790874	2546748	2547902	NC_000014.9	scaffold_1	99.4		True
fake: scaffold gap size wrong estimation (local)
22793253	22805969	2550040	2562722	NC_000014.9	scaffold_1	99.3		True
fake: scaffold gap size wrong estimation (local)
22806213	22823906	2562888	2581297	NC_000014.9	scaffold_1	97.83		True
fake: scaffold gap size wrong estimation (local)
22825645	22854598	2582997	2611967	NC_000014.9	scaffold_1	99.82		True
fake: scaffold gap size wrong estimation (local)
22854719	22859852	2612079	2617214	NC_000014.9	scaffold_1	99.96		True
fake: scaffold gap size wrong estimation (local)
22860943	22888841	2618291	2646188	NC_000014.9	scaffold_1	99.93		True
fake: scaffold gap size wrong estimation (local)
22889014	22910463	2646392	2667804	NC_000014.9	scaffold_1	99.65		True
fake: scaffold gap size wrong estimation (local)
22910699	22913135	2668136	2670567	NC_000014.9	scaffold_1	99.63		True
fake: scaffold gap size wrong estimation (local)
22913432	22931370	2671118	2688749	NC_000014.9	scaffold_1	98.26		True
fake: scaffold gap size wrong estimation (local)
22931771	22936748	2689081	2694058	NC_000014.9	scaffold_1	99.94		True
fake: scaffold gap size wrong estimation (local)
22937179	22939505	2694436	2696762	NC_000014.9	scaffold_1	99.96		True
fake: scaffold gap size wrong estimation (local)
22940295	22944942	2697637	2702278	NC_000014.9	scaffold_1	99.87		True
fake: scaffold gap size wrong estimation (local)
22945775	22946799	2703264	2704288	NC_000014.9	scaffold_1	100.0		True
fake: scaffold gap size wrong estimation (local)
22946930	22948453	2705085	2706608	NC_000014.9	scaffold_1	100.0		True
fake: scaffold gap size wrong estimation (local)
22949502	22965797	2707595	2723846	NC_000014.9	scaffold_1	99.67		True
fake: scaffold gap size wrong estimation (local)
22966125	22971029	2724294	2729197	NC_000014.9	scaffold_1	99.96		True
fake: scaffold gap size wrong estimation (local)
22971196	22975861	2729303	2733972	NC_000014.9	scaffold_1	99.89		True
indel: stretch of mismatches
22975895	23003749	2734006	2761798	NC_000014.9	scaffold_1	99.75		True
fake: scaffold gap size wrong estimation (local)
23003925	23019523	2761993	2777589	NC_000014.9	scaffold_1	99.96		True
local misassembly
23019806	23064713	2777964	2822678	NC_000014.9	scaffold_1	99.53		True
fake: scaffold gap size wrong estimation (local)
23064897	23107889	2822911	2865855	NC_000014.9	scaffold_1	99.72		True
fake: scaffold gap size wrong estimation (local)
23108452	23191356	2866396	2949604	NC_000014.9	scaffold_1	99.53		True
fake: scaffold gap size wrong estimation (local)
23193096	23208776	2951159	2966831	NC_000014.9	scaffold_1	99.88		True
fake: scaffold gap size wrong estimation (local)
23209020	23226397	2967064	2984450	NC_000014.9	scaffold_1	99.9		True
fake: scaffold gap size wrong estimation (local)
23226813	23231874	2984872	2990428	NC_000014.9	scaffold_1	95.91		True
fake: scaffold gap size wrong estimation (local)
23233744	23236487	2992060	2994803	NC_000014.9	scaffold_1	100.0		True
fake: scaffold gap size wrong estimation (local)
23237287	23241958	2995649	3000325	NC_000014.9	scaffold_1	99.91		True
fake: scaffold gap size wrong estimation (local)
23242109	23250435	3000501	3008827	NC_000014.9	scaffold_1	99.92		True
fake: scaffold gap size wrong estimation (local)
23251596	23254041	3009766	3012211	NC_000014.9	scaffold_1	99.96		True
fake: scaffold gap size wrong estimation (local)
23254345	23256820	3012584	3015060	NC_000014.9	scaffold_1	99.96		True
fake: scaffold gap size wrong estimation (local)
23257082	23263269	3015350	3021537	NC_000014.9	scaffold_1	99.85		True
fake: scaffold gap size wrong estimation (local)
23263589	23329017	3021773	3087166	NC_000014.9	scaffold_1	99.82		True
fake: scaffold gap size wrong estimation (local)
23329236	23468002	3087377	3225695	NC_000014.9	scaffold_1	99.54		True
fake: scaffold gap size wrong estimation (local)
23468154	23487354	3225902	3245087	NC_000014.9	scaffold_1	99.71		True
indel: indel (<= 5bp)
23487414	23501978	3245149	3259690	NC_000014.9	scaffold_1	99.4		True
indel: indel (<= 5bp)
23502029	23570386	3259739	3328097	NC_000014.9	scaffold_1	99.93		True
fake: scaffold gap size wrong estimation (local)
23570465	23584188	3328178	3342255	NC_000014.9	scaffold_1	99.33		True
fake: scaffold gap size wrong estimation (local)
23585401	23628474	3343428	3386500	NC_000014.9	scaffold_1	99.86		True
fake: scaffold gap size wrong estimation (local)
23629191	23705841	3387252	3463901	NC_000014.9	scaffold_1	99.81		True
fake: scaffold gap size wrong estimation (local)
23706665	23713536	3464707	3471578	NC_000014.9	scaffold_1	99.96		True
fake: scaffold gap size wrong estimation (local)
23714717	23736815	3472666	3494768	NC_000014.9	scaffold_1	99.78		True
fake: scaffold gap size wrong estimation (local)
23737612	23738923	3495526	3496837	NC_000014.9	scaffold_1	99.85		True
fake: scaffold gap size wrong estimation (local)
23740713	23742182	3498410	3499879	NC_000014.9	scaffold_1	99.8		True
fake: scaffold gap size wrong estimation (local)
23743020	23747228	3500714	3504921	NC_000014.9	scaffold_1	99.86		True
fake: scaffold gap size wrong estimation (local)
23747455	23757034	3505145	3514722	NC_000014.9	scaffold_1	99.87		True
fake: scaffold gap size wrong estimation (local)
23758017	23759487	3515691	3517161	NC_000014.9	scaffold_1	100.0		True
fake: scaffold gap size wrong estimation (local)
23761134	23874172	3518733	3631736	NC_000014.9	scaffold_1	99.62		True
fake: scaffold gap size wrong estimation (local)
23874437	23898384	3631973	3655873	NC_000014.9	scaffold_1	99.65		True
fake: scaffold gap size wrong estimation (local)
23899290	23918858	3656759	3676329	NC_000014.9	scaffold_1	99.96		True
fake: scaffold gap size wrong estimation (local)
23921546	23958333	3677893	3714574	NC_000014.9	scaffold_1	99.58		True
fake: scaffold gap size wrong estimation (local)
23964337	23965869	3718517	3720036	NC_000014.9	scaffold_1	99.02		True
fake: scaffold gap size wrong estimation (local)
23967634	23968640	3721719	3722729	NC_000014.9	scaffold_1	99.41		True
CONTIG	scaffold_1	3722729	correct
105634881	105637594	1	2654	NC_000014.9	scaffold_2	97.57		True
fake: scaffold gap size wrong estimation (local)
105670070	105671269	34318	35517	NC_000014.9	scaffold_2	100.0		True
fake: scaffold gap size wrong estimation (local)
105673067	105675510	37085	39528	NC_000014.9	scaffold_2	100.0		True
fake: scaffold gap size wrong estimation (local)
105675697	105677355	39767	41424	NC_000014.9	scaffold_2	99.88		True
CONTIG	scaffold_2	41424	correct
19192929	19209459	1	16335	NC_000014.9	scaffold_3	98.68		True
fake: scaffold gap size wrong estimation (local)
19210830	19222599	17679	29447	NC_000014.9	scaffold_3	99.84		True
fake: scaffold gap size wrong estimation (local)
19226306	19229939	37768	41403	NC_000014.9	scaffold_3	99.64		True
fake: scaffold gap size wrong estimation (local)
19230959	19231890	42396	43327	NC_000014.9	scaffold_3	99.68		True
CONTIG	scaffold_3	43327	correct
106714992	106716623	1632	1	NC_000014.9	scaffold_4	98.7		True
fake: scaffold gap size wrong estimation (local)
106711563	106713251	4861	3173	NC_000014.9	scaffold_4	100.0		True
fake: scaffold gap size wrong estimation (local)
106708948	106710671	7444	5721	NC_000014.9	scaffold_4	100.0		True
fake: scaffold gap size wrong estimation (local)
106706505	106708037	9875	8343	NC_000014.9	scaffold_4	99.74		True
local misassembly
106707880	106708869	10866	9877	NC_000014.9	scaffold_4	100.0		True
CONTIG	scaffold_4	10866	correct
18241814	18242546	3137	2405	NC_000014.9	scaffold_5	100.0		True
fake: scaffold gap size wrong estimation (local)
18239453	18240068	6664	6049	NC_000014.9	scaffold_5	100.0		True
fake: scaffold gap size wrong estimation (local)
18236394	18237859	9742	8276	NC_000014.9	scaffold_5	99.86		True
fake: scaffold gap size wrong estimation (local)
18234390	18235397	12593	11586	NC_000014.9	scaffold_5	100.0		True
fake: scaffold gap size wrong estimation (local)
18232670	18233884	14172	12958	NC_000014.9	scaffold_5	99.75		True
CONTIG	scaffold_5	14172	correct
18317482	18318467	1	986	NC_000014.9	scaffold_6	100.0		True
fake: scaffold gap size wrong estimation (local)
18320616	18321670	3016	4070	NC_000014.9	scaffold_6	100.0		True
fake: scaffold gap size wrong estimation (local)
18353508	18364811	33190	44493	NC_000014.9	scaffold_6	99.98		True
indel: indel (> 5bp)
18364937	18370104	44613	49802	NC_000014.9	scaffold_6	99.58		True
fake: scaffold gap size wrong estimation (local)
18370469	18371775	50387	51693	NC_000014.9	scaffold_6	100.0		True
fake: scaffold gap size wrong estimation (local)
18373138	18374809	52997	54668	NC_000014.9	scaffold_6	99.94		True
fake: scaffold gap size wrong estimation (local)
18376389	18381291	56095	60997	NC_000014.9	scaffold_6	99.96		True
fake: scaffold gap size wrong estimation (local)
18381477	18403853	61196	83557	NC_000014.9	scaffold_6	99.82		True
fake: scaffold gap size wrong estimation (local)
18404195	18412363	83873	92041	NC_000014.9	scaffold_6	100.0		True
fake: scaffold gap size wrong estimation (local)
18412983	18419698	92555	99270	NC_000014.9	scaffold_6	99.93		True
fake: scaffold gap size wrong estimation (local)
18420137	18421747	99754	101364	NC_000014.9	scaffold_6	100.0		True
fake: scaffold gap size wrong estimation (local)
18425354	18426715	107139	108500	NC_000014.9	scaffold_6	100.0		True
fake: scaffold gap size wrong estimation (local)
18428980	18432944	110563	114646	NC_000014.9	scaffold_6	97.6		True
fake: scaffold gap size wrong estimation (local)
18433034	18440795	114791	122552	NC_000014.9	scaffold_6	99.96		True
fake: scaffold gap size wrong estimation (local)
18440886	18446712	122692	128709	NC_000014.9	scaffold_6	99.9		True
fake: scaffold gap size wrong estimation (local)
18448148	18449550	130020	131422	NC_000014.9	scaffold_6	99.93		True
fake: scaffold gap size wrong estimation (local)
18449665	18461158	131720	143282	NC_000014.9	scaffold_6	98.6		True
fake: scaffold gap size wrong estimation (local)
18461359	18462313	143572	144526	NC_000014.9	scaffold_6	99.9		True
local misassembly
18462409	18463169	144527	145287	NC_000014.9	scaffold_6	100.0		True
indel: indel (> 5bp)
18463170	18463908	145336	146074	NC_000014.9	scaffold_6	100.0		True
fake: scaffold gap size wrong estimation (local)
18465062	18467701	147155	149794	NC_000014.9	scaffold_6	99.96		True
fake: scaffold gap size wrong estimation (local)
18468214	18469889	150291	151966	NC_000014.9	scaffold_6	99.82		True
fake: scaffold gap size wrong estimation (local)
18472756	18474566	153941	155751	NC_000014.9	scaffold_6	100.0		True
fake: scaffold gap size wrong estimation (local)
18475251	18476383	156426	157558	NC_000014.9	scaffold_6	100.0		True
fake: scaffold gap size wrong estimation (local)
18476622	18478232	158181	159791	NC_000014.9	scaffold_6	100.0		True
fake: scaffold gap size wrong estimation (local)
18478900	18498087	160317	179750	NC_000014.9	scaffold_6	99.95		True
fake: scaffold gap size wrong estimation (local)
18498415	18506985	180090	188887	NC_000014.9	scaffold_6	99.39		True
fake: scaffold gap size wrong estimation (local)
18507080	18513252	189130	195463	NC_000014.9	scaffold_6	98.41		True
fake: scaffold gap size wrong estimation (local)
18513660	18515889	195934	198163	NC_000014.9	scaffold_6	100.0		True
fake: scaffold gap size wrong estimation (local)
18516879	18518189	199166	200524	NC_000014.9	scaffold_6	96.25		True
fake: scaffold gap size wrong estimation (local)
18518392	18523102	200951	205669	NC_000014.9	scaffold_6	100.0		True
fake: scaffold gap size wrong estimation (local)
18523223	18528167	205867	210906	NC_000014.9	scaffold_6	98.09		True
fake: scaffold gap size wrong estimation (local)
18528595	18530768	211289	213462	NC_000014.9	scaffold_6	99.95		True
fake: scaffold gap size wrong estimation (local)
18531605	18533317	214352	216064	NC_000014.9	scaffold_6	99.82		True
fake: scaffold gap size wrong estimation (local)
18533881	18535204	216708	218031	NC_000014.9	scaffold_6	99.92		True
fake: scaffold gap size wrong estimation (local)
18536105	18537652	219113	220660	NC_000014.9	scaffold_6	100.0		True
fake: scaffold gap size wrong estimation (local)
18538762	18539808	221871	222917	NC_000014.9	scaffold_6	100.0		True
fake: scaffold gap size wrong estimation (local)
18540042	18542794	223164	225916	NC_000014.9	scaffold_6	99.82		True
fake: scaffold gap size wrong estimation (local)
18543166	18545095	226246	228223	NC_000014.9	scaffold_6	97.42		True
fake: scaffold gap size wrong estimation (local)
18545963	18547750	229134	230927	NC_000014.9	scaffold_6	99.61		True
fake: scaffold gap size wrong estimation (local)
18549384	18552251	232386	235251	NC_000014.9	scaffold_6	99.79		True
fake: scaffold gap size wrong estimation (local)
18552528	18566186	235515	249167	NC_000014.9	scaffold_6	99.89		True
fake: scaffold gap size wrong estimation (local)
18566353	18567471	249380	250498	NC_000014.9	scaffold_6	100.0		True
fake: scaffold gap size wrong estimation (local)
18567887	18569129	251084	252326	NC_000014.9	scaffold_6	100.0		True
fake: scaffold gap size wrong estimation (local)
18573033	18582015	255909	264891	NC_000014.9	scaffold_6	99.96		True
fake: scaffold gap size wrong estimation (local)
18582308	18584301	265132	267495	NC_000014.9	scaffold_6	99.95		True
fake: scaffold gap size wrong estimation (local)
18585506	18586732	268650	269876	NC_000014.9	scaffold_6	100.0		True
CONTIG	scaffold_6	269876	correct
94668582	94669611	1030	1	NC_000014.9	scaffold_7	99.9		True
fake: scaffold gap size wrong estimation (local)
94666158	94667022	3518	2654	NC_000014.9	scaffold_7	100.0		True
fake: scaffold gap size wrong estimation (local)
94664165	94665110	5963	5016	NC_000014.9	scaffold_7	99.47		True
fake: scaffold gap size wrong estimation (local)
94662545	94663907	8213	6855	NC_000014.9	scaffold_7	99.41		True
fake: scaffold gap size wrong estimation (local)
94659057	94661570	11696	9183	NC_000014.9	scaffold_7	99.68		True
CONTIG	scaffold_7	11696	correct
18656316	18657887	1	1572	NC_000014.9	scaffold_8	100.0		True
fake: scaffold gap size wrong estimation (local)
18659032	18660446	2689	4098	NC_000014.9	scaffold_8	99.65		True
local misassembly
18657889	18659160	4100	5371	NC_000014.9	scaffold_8	100.0		True
fake: scaffold gap size wrong estimation (local)
18660328	18661672	6621	7965	NC_000014.9	scaffold_8	100.0		True
fake: scaffold gap size wrong estimation (local)
18678201	18679438	25054	26291	NC_000014.9	scaffold_8	100.0		True
fake: scaffold gap size wrong estimation (local)
18680378	18682590	27204	29416	NC_000014.9	scaffold_8	99.91		True
fake: scaffold gap size wrong estimation (local)
18683349	18695637	30170	42455	NC_000014.9	scaffold_8	99.91		True
CONTIG	scaffold_8	42455	correct
73543945	73545103	1	1159	NC_000014.9	scaffold_9	99.65		True
fake: scaffold gap size wrong estimation (local)
73546909	73548430	2978	4499	NC_000014.9	scaffold_9	100.0		True
local misassembly
73545714	73546932	4501	5719	NC_000014.9	scaffold_9	99.92		True
CONTIG	scaffold_9	5719	correct
19725711	19736964	1	11254	NC_000014.9	scaffold_10	99.96		True
fake: scaffold gap size wrong estimation (local)
19737552	19775542	11732	49702	NC_000014.9	scaffold_10	99.89		True
fake: scaffold gap size wrong estimation (local)
19775685	19817507	49892	91752	NC_000014.9	scaffold_10	99.68		True
fake: scaffold gap size wrong estimation (local)
19818857	19820210	93159	94512	NC_000014.9	scaffold_10	100.0		True
fake: scaffold gap size wrong estimation (local)
19821210	19822217	95637	96644	NC_000014.9	scaffold_10	100.0		True
fake: scaffold gap size wrong estimation (local)
19822666	19824171	97659	99164	NC_000014.9	scaffold_10	99.8		True
fake: scaffold gap size wrong estimation (local)
19825491	19827027	100365	101901	NC_000014.9	scaffold_10	99.93		True
fake: scaffold gap size wrong estimation (local)
19827867	19831272	102788	106193	NC_000014.9	scaffold_10	99.97		True
fake: scaffold gap size wrong estimation (local)
19832320	19848119	107270	123073	NC_000014.9	scaffold_10	99.75		True
fake: scaffold gap size wrong estimation (local)
19848958	19851045	123787	125874	NC_000014.9	scaffold_10	99.81		True
fake: scaffold gap size wrong estimation (local)
19851378	19853086	126263	127971	NC_000014.9	scaffold_10	100.0		True
fake: scaffold gap size wrong estimation (local)
19854183	19855914	129078	130807	NC_000014.9	scaffold_10	99.77		True
fake: scaffold gap size wrong estimation (local)
19856179	19866373	130895	141087	NC_000014.9	scaffold_10	99.82		True
fake: scaffold gap size wrong estimation (local)
19866729	19872285	141441	146994	NC_000014.9	scaffold_10	99.91		True
fake: scaffold gap size wrong estimation (local)
19872608	19887743	147303	162435	NC_000014.9	scaffold_10	99.83		True
fake: scaffold gap size wrong estimation (local)
19888526	19890352	163251	165077	NC_000014.9	scaffold_10	100.0		True
fake: scaffold gap size wrong estimation (local)
19890455	19898406	165303	173255	NC_000014.9	scaffold_10	99.92		True
fake: scaffold gap size wrong estimation (local)
19898633	19904107	173405	178879	NC_000014.9	scaffold_10	99.96		True
fake: scaffold gap size wrong estimation (local)
19904373	19911232	179175	186034	NC_000014.9	scaffold_10	99.99		True
fake: scaffold gap size wrong estimation (local)
19914217	19937077	188950	211792	NC_000014.9	scaffold_10	99.75		True
fake: scaffold gap size wrong estimation (local)
19937712	19947230	212338	221856	NC_000014.9	scaffold_10	99.96		True
fake: scaffold gap size wrong estimation (local)
19948022	19959980	222680	234638	NC_000014.9	scaffold_10	99.98		True
fake: scaffold gap size wrong estimation (local)
19960161	19962899	234840	237578	NC_000014.9	scaffold_10	100.0		True
fake: scaffold gap size wrong estimation (local)
19964111	19965547	238779	240215	NC_000014.9	scaffold_10	100.0		True
fake: scaffold gap size wrong estimation (local)
19965733	19970707	240518	245493	NC_000014.9	scaffold_10	99.98		True
fake: scaffold gap size wrong estimation (local)
19972006	19972713	246866	247573	NC_000014.9	scaffold_10	99.72		True
local misassembly
19971336	19971878	247575	248117	NC_000014.9	scaffold_10	100.0		True
fake: scaffold gap size wrong estimation (local)
19972853	19975712	249156	252015	NC_000014.9	scaffold_10	99.93		True
fake: scaffold gap size wrong estimation (local)
19976449	19977361	252628	253540	NC_000014.9	scaffold_10	100.0		True
fake: scaffold gap size wrong estimation (local)
19979210	19980804	254859	256453	NC_000014.9	scaffold_10	99.94		True
fake: scaffold gap size wrong estimation (local)
19982432	20013669	258062	289086	NC_000014.9	scaffold_10	99.24		True
fake: scaffold gap size wrong estimation (local)
20013810	20016069	289235	291494	NC_000014.9	scaffold_10	99.91		True
fake: scaffold gap size wrong estimation (local)
20016473	20018264	292091	293886	NC_000014.9	scaffold_10	99.67		True
fake: scaffold gap size wrong estimation (local)
20019470	20023548	294923	299004	NC_000014.9	scaffold_10	99.8		True
fake: scaffold gap size wrong estimation (local)
20024928	20026125	300452	301649	NC_000014.9	scaffold_10	99.92		True
fake: scaffold gap size wrong estimation (local)
20027755	20029364	303230	304839	NC_000014.9	scaffold_10	99.94		True
fake: scaffold gap size wrong estimation (local)
20030697	20037136	305992	312436	NC_000014.9	scaffold_10	99.89		True
fake: scaffold gap size wrong estimation (local)
20043106	20045381	316270	318545	NC_000014.9	scaffold_10	99.78		True
fake: scaffold gap size wrong estimation (local)
20045538	20047603	318911	320976	NC_000014.9	scaffold_10	99.85		True
fake: scaffold gap size wrong estimation (local)
20047974	20060047	321447	333524	NC_000014.9	scaffold_10	99.71		True
fake: scaffold gap size wrong estimation (local)
20060309	20061249	333941	334879	NC_000014.9	scaffold_10	99.79		True
fake: scaffold gap size wrong estimation (local)
20061494	20078525	335203	352542	NC_000014.9	scaffold_10	98.06		True
fake: scaffold gap size wrong estimation (local)
20079547	20082119	353473	356045	NC_000014.9	scaffold_10	99.96		True
fake: scaffold gap size wrong estimation (local)
20082723	20087343	356636	361259	NC_000014.9	scaffold_10	99.87		True
fake: scaffold gap size wrong estimation (local)
20088329	20093125	362143	366939	NC_000014.9	scaffold_10	99.9		True
fake: scaffold gap size wrong estimation (local)
20093922	20104069	367703	377850	NC_000014.9	scaffold_10	99.93		True
fake: scaffold gap size wrong estimation (local)
20109760	20128388	383235	401863	NC_000014.9	scaffold_10	99.99		True
fake: scaffold gap size wrong estimation (local)
20131138	20151756	404070	424685	NC_000014.9	scaffold_10	99.96		True
fake: scaffold gap size wrong estimation (local)
20153277	20169038	425993	441755	NC_000014.9	scaffold_10	99.99		True
fake: scaffold gap size wrong estimation (local)
20169650	20171270	442476	444096	NC_000014.9	scaffold_10	100.0		True
fake: scaffold gap size wrong estimation (local)
20172909	20174305	445583	446979	NC_000014.9	scaffold_10	100.0		True
fake: scaffold gap size wrong estimation (local)
20174693	20176162	447692	449161	NC_000014.9	scaffold_10	100.0		True
fake: scaffold gap size wrong estimation (local)
20176617	20200982	449480	473887	NC_000014.9	scaffold_10	99.87		True
fake: scaffold gap size wrong estimation (local)
20201687	20208890	474518	481717	NC_000014.9	scaffold_10	99.82		True
fake: scaffold gap size wrong estimation (local)
20209066	20212291	481883	485108	NC_000014.9	scaffold_10	99.84		True
fake: scaffold gap size wrong estimation (local)
20213279	20226066	485973	498743	NC_000014.9	scaffold_10	99.52		True
fake: scaffold gap size wrong estimation (local)
20227247	20230079	499900	503010	NC_000014.9	scaffold_10	99.93		True
CONTIG	scaffold_10	503010	correct
92241091	92252883	11780	1	NC_000014.9	scaffold_11	99.45		True
CONTIG	scaffold_11	11780	correct
105707022	105709189	1	2189	NC_000014.9	scaffold_12	98.22		True
relocation, scaffold gap is present, inconsistency = 149749
105859219	105863076	2470	6327	NC_000014.9	scaffold_12	99.95		True
relocation, inconsistency = 37355
105902541	105932890	8437	38614	NC_000014.9	scaffold_12	99.35		True
fake: scaffold gap size wrong estimation (local)
105932980	105935535	38833	41388	NC_000014.9	scaffold_12	100.0		True
fake: scaffold gap size wrong estimation (local)
105935730	105947217	41565	53052	NC_000014.9	scaffold_12	99.99		True
fake: scaffold gap size wrong estimation (local)
105947454	105956352	53193	62207	NC_000014.9	scaffold_12	98.69		True
fake: scaffold gap size wrong estimation (local)
105960706	105989055	65197	93559	NC_000014.9	scaffold_12	99.93		True
fake: scaffold gap size wrong estimation (local)
105989319	106000273	93809	104679	NC_000014.9	scaffold_12	99.07		True
fake: scaffold gap size wrong estimation (local)
106001441	106002859	105758	107176	NC_000014.9	scaffold_12	100.0		True
fake: scaffold gap size wrong estimation (local)
106003076	106012010	107420	116352	NC_000014.9	scaffold_12	99.88		True
fake: scaffold gap size wrong estimation (local)
106012219	106014249	116678	118708	NC_000014.9	scaffold_12	99.95		True
fake: scaffold gap size wrong estimation (local)
106015287	106017494	119754	121961	NC_000014.9	scaffold_12	99.71		True
relocation, inconsistency = 9557
106027052	106059246	121962	154194	NC_000014.9	scaffold_12	99.71		True
fake: scaffold gap size wrong estimation (local)
106059405	106061195	154423	156213	NC_000014.9	scaffold_12	99.66		True
fake: scaffold gap size wrong estimation (local)
106062410	106074769	157385	169728	NC_000014.9	scaffold_12	98.65		True
fake: not a misassembly (possible transposable element)
106765004	106765527	180496	181019	NC_000014.9	scaffold_12	96.18		True
fake: not a misassembly (possible transposable element)
106113012	106116354	208275	211619	NC_000014.9	scaffold_12	97.76		True
indel: indel (<= 5bp)
106116411	106136195	211673	231454	NC_000014.9	scaffold_12	99.7		True
fake: scaffold gap size wrong estimation (local)
106137288	106139143	232520	234377	NC_000014.9	scaffold_12	99.46		True
fake: scaffold gap size wrong estimation (local)
106139648	106141904	234903	237158	NC_000014.9	scaffold_12	99.42		True
fake: scaffold gap size wrong estimation (local)
106142459	106153220	237784	248485	NC_000014.9	scaffold_12	99.02		True
fake: scaffold gap size wrong estimation (local)
106153350	106164526	249965	261110	NC_000014.9	scaffold_12	99.29		True
fake: scaffold gap size wrong estimation (local)
106165464	106169744	262021	266301	NC_000014.9	scaffold_12	99.49		True
fake: scaffold gap size wrong estimation (local)
106169984	106175551	266466	272091	NC_000014.9	scaffold_12	99.56		True
fake: scaffold gap size wrong estimation (local)
106176119	106179633	272611	276131	NC_000014.9	scaffold_12	99.83		True
fake: scaffold gap size wrong estimation (local)
106180171	106182013	276705	278547	NC_000014.9	scaffold_12	99.95		True
fake: scaffold gap size wrong estimation (local)
106182119	106206376	278641	302824	NC_000014.9	scaffold_12	99.54		True
fake: scaffold gap size wrong estimation (local)
106206540	106234986	303297	331708	NC_000014.9	scaffold_12	99.55		True
fake: scaffold gap size wrong estimation (local)
106235268	106243145	331980	339915	NC_000014.9	scaffold_12	99.25		True
fake: scaffold gap size wrong estimation (local)
106244885	106257937	341431	354484	NC_000014.9	scaffold_12	99.78		True
indel: indel (<= 5bp)
106257977	106270643	354525	367196	NC_000014.9	scaffold_12	99.9		True
fake: scaffold gap size wrong estimation (local)
106272127	106304613	368558	400412	NC_000014.9	scaffold_12	97.75		True
fake: scaffold gap size wrong estimation (local)
106306094	106307553	401834	403293	NC_000014.9	scaffold_12	99.86		True
fake: scaffold gap size wrong estimation (local)
106309235	106329669	404865	425608	NC_000014.9	scaffold_12	98.44		True
indel: indel (<= 5bp)
106329773	106332045	425714	428001	NC_000014.9	scaffold_12	96.68		True
fake: scaffold gap size wrong estimation (local)
106333318	106333885	428861	429428	NC_000014.9	scaffold_12	97.89		True
indel: indel (<= 5bp)
106333887	106337064	429429	432606	NC_000014.9	scaffold_12	98.93		True
relocation, scaffold gap is present, inconsistency = 25987
106364573	106366017	434128	435572	NC_000014.9	scaffold_12	99.86		True
fake: scaffold gap size wrong estimation (local)
106367589	106389126	437143	458685	NC_000014.9	scaffold_12	99.87		True
fake: scaffold gap size wrong estimation (local)
106389580	106398078	459117	467615	NC_000014.9	scaffold_12	99.96		True
fake: scaffold gap size wrong estimation (local)
106408116	106409309	477677	478870	NC_000014.9	scaffold_12	99.83		True
fake: scaffold gap size wrong estimation (local)
106410086	106412210	479703	481827	NC_000014.9	scaffold_12	100.0		True
fake: scaffold gap size wrong estimation (local)
106412468	106427321	482102	496903	NC_000014.9	scaffold_12	99.44		True
fake: scaffold gap size wrong estimation (local)
106429793	106481709	498896	551033	NC_000014.9	scaffold_12	99.26		True
fake: scaffold gap size wrong estimation (local)
106482978	106498496	552272	567740	NC_000014.9	scaffold_12	99.56		True
fake: scaffold gap size wrong estimation (local)
106498865	106548977	568074	618201	NC_000014.9	scaffold_12	99.25		True
fake: scaffold gap size wrong estimation (local)
106550254	106563807	619399	632921	NC_000014.9	scaffold_12	98.87		True
fake: scaffold gap size wrong estimation (local)
106564031	106590985	633120	660074	NC_000014.9	scaffold_12	99.86		True
fake: scaffold gap size wrong estimation (local)
106591506	106592520	660603	661617	NC_000014.9	scaffold_12	100.0		True
fake: scaffold gap size wrong estimation (local)
106592889	106594110	662262	663483	NC_000014.9	scaffold_12	99.75		True
fake: scaffold gap size wrong estimation (local)
106596463	106597079	665579	666195	NC_000014.9	scaffold_12	100.0		True
fake: scaffold gap size wrong estimation (local)
106598473	106600325	667774	669626	NC_000014.9	scaffold_12	99.95		True
fake: scaffold gap size wrong estimation (local)
106601476	106602845	670631	671991	NC_000014.9	scaffold_12	99.34		True
fake: scaffold gap size wrong estimation (local)
106603597	106605506	672841	674750	NC_000014.9	scaffold_12	99.95		True
fake: scaffold gap size wrong estimation (local)
106605643	106616621	674939	685917	NC_000014.9	scaffold_12	99.96		True
fake: scaffold gap size wrong estimation (local)
106616809	106618693	686124	688008	NC_000014.9	scaffold_12	100.0		True
local misassembly
106618824	106627734	688257	697173	NC_000014.9	scaffold_12	99.71		True
fake: scaffold gap size wrong estimation (local)
106642053	106663998	711307	733251	NC_000014.9	scaffold_12	99.99		True
fake: scaffold gap size wrong estimation (local)
106664235	106674892	733456	744113	NC_000014.9	scaffold_12	99.98		True
fake: scaffold gap size wrong estimation (local)
106677329	106692194	746118	761009	NC_000014.9	scaffold_12	99.78		True
fake: scaffold gap size wrong estimation (local)
106692492	106694751	761340	763599	NC_000014.9	scaffold_12	99.91		True
fake: scaffold gap size wrong estimation (local)
106695314	106698666	764220	767572	NC_000014.9	scaffold_12	99.97		True
fake: scaffold gap size wrong estimation (local)
106699965	106701367	768883	770285	NC_000014.9	scaffold_12	100.0		True
fake: scaffold gap size wrong estimation (local)
106701896	106704307	770908	773319	NC_000014.9	scaffold_12	99.79		True
fake: scaffold gap size wrong estimation (local)
106704819	106705659	773860	774699	NC_000014.9	scaffold_12	99.88		True
relocation, scaffold gap is present, inconsistency = 45089
106768612	106770957	792563	794908	NC_000014.9	scaffold_12	99.96		True
fake: scaffold gap size wrong estimation (local)
106771314	106772910	795361	796957	NC_000014.9	scaffold_12	100.0		True
fake: scaffold gap size wrong estimation (local)
106774120	106775127	798189	799196	NC_000014.9	scaffold_12	100.0		True
fake: scaffold gap size wrong estimation (local)
106776120	106777534	800550	801964	NC_000014.9	scaffold_12	99.72		True
fake: scaffold gap size wrong estimation (local)
106778867	106780450	803034	804617	NC_000014.9	scaffold_12	100.0		True
fake: scaffold gap size wrong estimation (local)
106783694	106797043	806121	819472	NC_000014.9	scaffold_12	99.98		True
fake: scaffold gap size wrong estimation (local)
106797782	106826635	820158	848947	NC_000014.9	scaffold_12	99.7		True
fake: scaffold gap size wrong estimation (local)
106826873	106863419	849107	885698	NC_000014.9	scaffold_12	99.78		True
fake: scaffold gap size wrong estimation (local)
106864401	106881245	886595	903420	NC_000014.9	scaffold_12	99.85		True
CONTIG	scaffold_12	903420	misassembled
18341761	18342863	1103	1	NC_000014.9	scaffold_13	99.91		True
CONTIG	scaffold_13	1103	correct
56222752	56224744	1993	1	NC_000014.9	scaffold_14	100.0		True
fake: scaffold gap size wrong estimation (local)
56220338	56221466	4504	3376	NC_000014.9	scaffold_14	99.82		True
fake: scaffold gap size wrong estimation (local)
56217484	56218374	7141	6251	NC_000014.9	scaffold_14	99.89		True
CONTIG	scaffold_14	7141	correct
77395128	77396265	1138	1	NC_000014.9	scaffold_15	100.0		True
CONTIG	scaffold_15	1138	correct
106061120	106062210	1091	1	NC_000014.9	scaffold_16	99.63		True
CONTIG	scaffold_16	1142	correct
18325186	18326350	1164	1	NC_000014.9	scaffold_17	99.91		True
CONTIG	scaffold_17	1164	correct
CONTIG	scaffold_18	219	unaligned
CONTIG	scaffold_19	446	unaligned
91914481	91915701	1221	1	NC_000014.9	scaffold_21	100.0		True
CONTIG	scaffold_21	1231	correct
56727449	56728682	1234	1	NC_000014.9	scaffold_22	99.84		True
fake: scaffold gap size wrong estimation (local)
56724719	56726025	4008	2701	NC_000014.9	scaffold_22	99.77		True
relocation, inconsistency = 360892
56362982	56363826	4009	4853	NC_000014.9	scaffold_22	100.0		True
CONTIG	scaffold_22	4853	misassembled
34736819	34738045	1249	20	NC_000014.9	scaffold_23	99.35		True
CONTIG	scaffold_23	1249	correct
34557735	34559031	1308	1	NC_000014.9	scaffold_24	99.16		True
fake: scaffold gap size wrong estimation (local)
34549676	34556095	8991	2575	NC_000014.9	scaffold_24	99.78		True
CONTIG	scaffold_24	8991	correct
18265097	18266429	1333	1	NC_000014.9	scaffold_25	100.0		True
CONTIG	scaffold_25	1333	correct
18280718	18282539	1822	1	NC_000014.9	scaffold_26	99.95		True
fake: scaffold gap size wrong estimation (local)
18278912	18280258	4295	2949	NC_000014.9	scaffold_26	99.93		True
fake: scaffold gap size wrong estimation (local)
18276577	18277896	6874	5555	NC_000014.9	scaffold_26	100.0		True
fake: scaffold gap size wrong estimation (local)
18274263	18275395	8906	7774	NC_000014.9	scaffold_26	100.0		True
CONTIG	scaffold_26	8906	correct
90792435	90793020	420	1005	NC_000014.9	scaffold_27	100.0		True
fake: scaffold gap size wrong estimation (local)
90795455	90796748	3175	4468	NC_000014.9	scaffold_27	100.0		True
CONTIG	scaffold_27	4468	correct
CONTIG	scaffold_28	375	unaligned
18304345	18305826	10	1491	NC_000014.9	scaffold_30	99.93		True
fake: scaffold gap size wrong estimation (local)
18307222	18308785	3014	4562	NC_000014.9	scaffold_30	98.85		True
CONTIG	scaffold_30	4562	correct
105616363	105617709	1347	1	NC_000014.9	scaffold_31	99.26		True
CONTIG	scaffold_31	1531	correct
CONTIG	scaffold_32	341	unaligned
105612505	105614351	1858	12	NC_000014.9	scaffold_33	99.78		True
fake: scaffold gap size wrong estimation (local)
105610187	105610891	4174	3468	NC_000014.9	scaffold_33	95.93		True
fake: scaffold gap size wrong estimation (local)
105594723	105609116	19702	5398	NC_000014.9	scaffold_33	99.05		True
fake: scaffold gap size wrong estimation (local)
105591059	105593434	22865	20490	NC_000014.9	scaffold_33	99.75		True
fake: scaffold gap size wrong estimation (local)
105587241	105589573	26536	24204	NC_000014.9	scaffold_33	99.87		True
CONTIG	scaffold_33	26536	correct
21292515	21294172	1	1658	NC_000014.9	scaffold_34	100.0		True
fake: scaffold gap size wrong estimation (local)
21295674	21296773	3083	4182	NC_000014.9	scaffold_34	100.0		True
CONTIG	scaffold_34	4182	correct
65109540	65110138	1	600	NC_000014.9	scaffold_35	99.67		True
CONTIG	scaffold_35	600	correct
CONTIG	scaffold_36	210	unaligned
18246302	18247217	916	1	NC_000014.9	scaffold_37	99.89		True
CONTIG	scaffold_37	916	correct
78106226	78106799	574	1	NC_000014.9	scaffold_38	99.83		True
CONTIG	scaffold_38	574	correct
105576421	105578411	1987	1	NC_000014.9	scaffold_39	99.75		True
CONTIG	scaffold_39	1987	correct
102920100	102921354	1255	1	NC_000014.9	scaffold_40	100.0		True
CONTIG	scaffold_40	1255	correct
CONTIG	scaffold_41	424	unaligned
95812122	95813108	1	987	NC_000014.9	scaffold_42	100.0		True
CONTIG	scaffold_42	987	correct
18319878	18320598	721	1	NC_000014.9	scaffold_43	100.0		True
CONTIG	scaffold_43	721	correct
CONTIG	scaffold_45	236	unaligned
73574276	73576460	1	2185	NC_000014.9	scaffold_46	99.91		True
fake: scaffold gap size wrong estimation (local)
73577316	73579202	2897	4783	NC_000014.9	scaffold_46	99.89		True
fake: scaffold gap size wrong estimation (local)
73579516	73580666	5391	6538	NC_000014.9	scaffold_46	99.57		True
fake: scaffold gap size wrong estimation (local)
73581565	73583750	7566	9743	NC_000014.9	scaffold_46	98.76		True
relocation, scaffold gap is present, inconsistency = -32133
73553125	73556894	11251	15020	NC_000014.9	scaffold_46	99.92		True
CONTIG	scaffold_46	15020	misassembled
CONTIG	scaffold_47	429	unaligned
73774145	73779297	5153	1	NC_000014.9	scaffold_48	99.94		True
CONTIG	scaffold_48	5153	correct
CONTIG	scaffold_49	258	unaligned
74626292	74626850	618	60	NC_000014.9	scaffold_50	100.0		True
CONTIG	scaffold_50	618	correct
48886587	48887422	836	1	NC_000014.9	scaffold_51	99.88		True
CONTIG	scaffold_51	836	correct
CONTIG	scaffold_52	380	unaligned
18525148	18525746	599	1	NC_000014.9	scaffold_54	100.0		True
CONTIG	scaffold_54	599	correct
CONTIG	scaffold_55	290	unaligned
106602704	106603544	841	1	NC_000014.9	scaffold_56	100.0		True
CONTIG	scaffold_56	841	correct
101998280	101998898	619	1	NC_000014.9	scaffold_57	100.0		True
CONTIG	scaffold_57	619	correct
CONTIG	scaffold_62	239	unaligned
60701603	60703292	1	1694	NC_000014.9	scaffold_66	99.76		True
CONTIG	scaffold_66	1694	correct
86101496	86105422	3919	1	NC_000014.9	scaffold_69	99.8		True
CONTIG	scaffold_69	3919	correct
18525652	18526707	1056	1	NC_000014.9	scaffold_71	100.0		True
CONTIG	scaffold_71	1056	correct
CONTIG	scaffold_72	446	unaligned
CONTIG	scaffold_73	223	unaligned
CONTIG	scaffold_78	338	unaligned
94893803	94894549	746	1	NC_000014.9	scaffold_82	97.72		True
CONTIG	scaffold_82	746	correct
CONTIG	scaffold_83	447	unaligned
87418198	87423946	1	5749	NC_000014.9	scaffold_84	100.0		True
CONTIG	scaffold_84	5749	correct
105863506	105864617	1112	1	NC_000014.9	scaffold_86	99.73		True
CONTIG	scaffold_86	1112	correct
CONTIG	scaffold_93	294	unaligned
CONTIG	scaffold_96	210	unaligned
57105133	57112694	7557	1	NC_000014.9	scaffold_98	99.67		True
CONTIG	scaffold_98	7557	correct
102130000	102131055	1056	1	NC_000014.9	scaffold_101	100.0		True
CONTIG	scaffold_101	1056	correct
105161147	105161782	1	636	NC_000014.9	scaffold_105	100.0		True
CONTIG	scaffold_105	636	correct
72941662	72942904	1217	1	NC_000014.9	scaffold_108	97.91		True
CONTIG	scaffold_108	1217	correct
CONTIG	scaffold_111	340	unaligned
CONTIG	scaffold_112	880	unaligned
CONTIG	scaffold_124	217	unaligned
77826044	77826890	1	846	NC_000014.9	scaffold_125	99.88		True
CONTIG	scaffold_125	846	correct
CONTIG	scaffold_129	232	unaligned
CONTIG	scaffold_130	302	unaligned
CONTIG	scaffold_132	307	unaligned
93178457	93180228	1772	1	NC_000014.9	scaffold_136	99.94		True
CONTIG	scaffold_136	1772	correct
CONTIG	scaffold_137	402	unaligned
CONTIG	scaffold_145	331	unaligned
CONTIG	scaffold_147	218	unaligned
73641437	73642809	76	1442	NC_000014.9	scaffold_151	99.49		True
CONTIG	scaffold_151	1442	correct
CONTIG	scaffold_153	203	unaligned
CONTIG	scaffold_161	304	unaligned
104289095	104289647	553	1	NC_000014.9	scaffold_162	100.0		True
CONTIG	scaffold_162	553	correct
CONTIG	scaffold_169	256	unaligned
CONTIG	scaffold_173	416	unaligned
82310353	82311177	825	1	NC_000014.9	scaffold_175	100.0		True
CONTIG	scaffold_175	825	correct
25221295	25221875	581	1	NC_000014.9	scaffold_195	99.66		True
CONTIG	scaffold_195	581	correct
CONTIG	scaffold_196	214	unaligned
50682735	50684197	1516	54	NC_000014.9	scaffold_212	100.0		True
CONTIG	scaffold_212	1516	correct
CONTIG	scaffold_215	391	unaligned
CONTIG	scaffold_221	331	unaligned
CONTIG	scaffold_237	234	unaligned
CONTIG	scaffold_240	498	unaligned
CONTIG	scaffold_243	276	unaligned
CONTIG	scaffold_255	290	unaligned
29285342	29286401	1060	1	NC_000014.9	scaffold_262	99.81		True
CONTIG	scaffold_262	1060	correct
CONTIG	scaffold_263	202	unaligned
CONTIG	scaffold_270	234	unaligned
CONTIG	scaffold_276	215	unaligned
CONTIG	scaffold_293	231	unaligned
31218369	31219087	1	719	NC_000014.9	scaffold_295	100.0		True
CONTIG	scaffold_295	1020	correct
103506558	103507115	1	558	NC_000014.9	scaffold_296	100.0		True
local misassembly
103505958	103506652	654	1348	NC_000014.9	scaffold_296	100.0		True
CONTIG	scaffold_296	1348	correct
102482767	102483808	1	1036	NC_000014.9	scaffold_297	97.61		True
CONTIG	scaffold_297	1036	correct
73824079	73824981	1	903	NC_000014.9	scaffold_298	100.0		True
CONTIG	scaffold_298	903	correct
19247728	19248758	1025	1	NC_000014.9	scaffold_299	98.83		True
CONTIG	scaffold_299	1025	correct
60942004	60943064	1060	1	NC_000014.9	scaffold_300	99.72		True
CONTIG	scaffold_300	1060	correct
62618686	62619493	808	1	NC_000014.9	scaffold_301	99.88		True
fake: scaffold gap size wrong estimation (local)
62616147	62617322	3442	2267	NC_000014.9	scaffold_301	99.49		True
fake: scaffold gap size wrong estimation (local)
62613572	62614164	5990	5398	NC_000014.9	scaffold_301	99.83		True
local misassembly
62614299	62614972	6665	5992	NC_000014.9	scaffold_301	99.85		True
CONTIG	scaffold_301	6665	correct
70309090	70310054	965	1	NC_000014.9	scaffold_302	100.0		True
CONTIG	scaffold_302	965	correct
CONTIG	scaffold_303	431	unaligned
21276284	21277361	1077	1	NC_000014.9	scaffold_304	99.81		True
CONTIG	scaffold_304	1077	correct
103797091	103798169	1080	2	NC_000014.9	scaffold_305	100.0		True
CONTIG	scaffold_305	1080	correct
46206664	46207748	1085	1	NC_000014.9	scaffold_306	99.91		True
CONTIG	scaffold_306	1085	correct
106304804	106305895	1	1091	NC_000014.9	scaffold_307	99.91		True
fake: scaffold gap size wrong estimation (local)
106307712	106308990	2809	4086	NC_000014.9	scaffold_307	99.84		True
CONTIG	scaffold_307	4086	correct
105657725	105658833	1109	1	NC_000014.9	scaffold_308	99.91		True
CONTIG	scaffold_308	1109	correct
64657515	64658649	1	1135	NC_000014.9	scaffold_309	99.47		True
CONTIG	scaffold_309	1135	correct
106366329	106367304	976	1	NC_000014.9	scaffold_310	100.0		True
CONTIG	scaffold_310	976	correct
105647704	105648863	1160	1	NC_000014.9	scaffold_311	99.91		True
CONTIG	scaffold_311	1160	correct
89414554	89415624	1076	6	NC_000014.9	scaffold_312	100.0		True
CONTIG	scaffold_312	1076	correct
25774738	25775908	1	1171	NC_000014.9	scaffold_313	100.0		True
fake: scaffold gap size wrong estimation (local)
25776760	25778967	2053	4261	NC_000014.9	scaffold_313	99.95		True
CONTIG	scaffold_313	4261	correct
34559148	34560380	1228	1	NC_000014.9	scaffold_314	99.59		True
CONTIG	scaffold_314	1228	correct
49528851	49529938	1089	1	NC_000014.9	scaffold_315	99.82		True
CONTIG	scaffold_315	1089	correct
91634754	91640243	1	5523	NC_000014.9	scaffold_316	99.87		True
CONTIG	scaffold_316	5523	correct
56653368	56654626	1254	1	NC_000014.9	scaffold_317	99.44		True
fake: scaffold gap size wrong estimation (local)
56645568	56652038	8944	2445	NC_000014.9	scaffold_317	99.71		True
CONTIG	scaffold_317	8944	correct
18252413	18253698	1286	1	NC_000014.9	scaffold_318	100.0		True
CONTIG	scaffold_318	1286	correct
106404615	106405262	648	1	NC_000014.9	scaffold_319	99.85		True
CONTIG	scaffold_319	648	correct
42159486	42160612	1127	1	NC_000014.9	scaffold_320	100.0		True
CONTIG	scaffold_320	1127	correct
84506999	84508224	1226	1	NC_000014.9	scaffold_321	99.92		True
CONTIG	scaffold_321	1226	correct
105666322	105667635	1329	16	NC_000014.9	scaffold_322	99.62		True
fake: scaffold gap size wrong estimation (local)
105664055	105665277	3769	2549	NC_000014.9	scaffold_322	99.84		True
CONTIG	scaffold_322	3769	correct
18229040	18230397	1358	1	NC_000014.9	scaffold_323	99.93		True
CONTIG	scaffold_323	1358	correct
105701653	105702935	1	1283	NC_000014.9	scaffold_324	100.0		True
fake: scaffold gap size wrong estimation (local)
105704410	105705504	2855	3957	NC_000014.9	scaffold_324	99.27		True
CONTIG	scaffold_324	3957	correct
95563117	95564104	988	1	NC_000014.9	scaffold_325	99.8		True
CONTIG	scaffold_325	988	correct
18260383	18261787	1405	1	NC_000014.9	scaffold_326	100.0		True
CONTIG	scaffold_326	1405	correct
73576037	73577332	1312	1	NC_000014.9	scaffold_327	98.62		True
CONTIG	scaffold_327	1312	correct
18338789	18340114	1326	1	NC_000014.9	scaffold_328	100.0		True
fake: scaffold gap size wrong estimation (local)
18335800	18337958	4301	2143	NC_000014.9	scaffold_328	100.0		True
CONTIG	scaffold_328	4301	correct
105693865	105695331	1467	1	NC_000014.9	scaffold_329	100.0		True
CONTIG	scaffold_329	1467	correct
CONTIG	scaffold_330	397	unaligned
84650227	84651505	1279	1	NC_000014.9	scaffold_331	99.76		True
CONTIG	scaffold_331	1279	correct
102546842	102548162	1443	123	NC_000014.9	scaffold_332	100.0		True
CONTIG	scaffold_332	1443	correct
26266976	26268595	1	1618	NC_000014.9	scaffold_333	99.88		True
CONTIG	scaffold_333	1618	correct
58039800	58041350	1551	1	NC_000014.9	scaffold_334	99.81		True
CONTIG	scaffold_334	1551	correct
95603199	95604635	1437	1	NC_000014.9	scaffold_335	99.93		True
CONTIG	scaffold_335	1437	correct
18245623	18246293	671	1	NC_000014.9	scaffold_336	100.0		True
CONTIG	scaffold_336	671	correct
41037321	41038842	1522	1	NC_000014.9	scaffold_337	100.0		True
CONTIG	scaffold_337	1522	correct
105569833	105571638	1822	1	NC_000014.9	scaffold_338	98.41		True
CONTIG	scaffold_338	1822	correct
45880451	45882283	1834	1	NC_000014.9	scaffold_339	99.89		True
CONTIG	scaffold_339	1834	correct
19978179	19979795	1	1617	NC_000014.9	scaffold_340	99.88		True
CONTIG	scaffold_340	1617	correct
CONTIG	scaffold_341	429	unaligned
95811497	95812065	1	569	NC_000014.9	scaffold_342	100.0		True
CONTIG	scaffold_342	569	correct
106777965	106779611	1647	1	NC_000014.9	scaffold_343	100.0		True
CONTIG	scaffold_343	1647	correct
23250545	23252547	1	2003	NC_000014.9	scaffold_344	100.0		True
CONTIG	scaffold_344	2003	correct
18224970	18227001	2032	1	NC_000014.9	scaffold_345	99.95		True
CONTIG	scaffold_345	2032	correct
41234357	41236281	1	1925	NC_000014.9	scaffold_346	100.0		True
CONTIG	scaffold_346	1925	correct
18344084	18346244	2161	1	NC_000014.9	scaffold_347	100.0		True
CONTIG	scaffold_347	2161	correct
40172019	40173341	1324	1	NC_000014.9	scaffold_348	99.85		True
CONTIG	scaffold_348	1324	correct
19853088	19854118	1031	1	NC_000014.9	scaffold_349	100.0		True
CONTIG	scaffold_349	1031	correct
34555105	34557519	2412	1	NC_000014.9	scaffold_350	99.5		True
CONTIG	scaffold_350	2412	correct
74250252	74251485	1	1235	NC_000014.9	scaffold_351	99.92		True
CONTIG	scaffold_351	1235	correct
25411647	25412973	1327	1	NC_000014.9	scaffold_352	100.0		True
CONTIG	scaffold_352	1327	correct
56674280	56676515	7	2242	NC_000014.9	scaffold_353	100.0		True
fake: scaffold gap size wrong estimation (local)
56677006	56678641	2816	4451	NC_000014.9	scaffold_353	99.88		True
CONTIG	scaffold_353	4451	correct
84111989	84112724	736	1	NC_000014.9	scaffold_354	100.0		True
CONTIG	scaffold_354	736	correct
105658668	105661448	2781	1	NC_000014.9	scaffold_355	99.93		True
CONTIG	scaffold_355	2781	correct
94890778	94891859	1082	1	NC_000014.9	scaffold_356	99.91		True
CONTIG	scaffold_356	1082	correct
28747711	28748664	954	1	NC_000014.9	scaffold_357	100.0		True
CONTIG	scaffold_357	954	correct
CONTIG	scaffold_358	485	unaligned
71929621	71930701	1081	1	NC_000014.9	scaffold_359	100.0		True
CONTIG	scaffold_359	1081	correct
93959255	93960715	1432	1	NC_000014.9	scaffold_360	97.95		True
CONTIG	scaffold_360	1432	correct
18446332	18448090	1759	1	NC_000014.9	scaffold_361	100.0		True
CONTIG	scaffold_361	1759	correct
104163663	104164168	506	1	NC_000014.9	scaffold_362	99.8		True
CONTIG	scaffold_362	506	correct
21788601	21789509	909	1	NC_000014.9	scaffold_363	100.0		True
CONTIG	scaffold_363	909	correct
22675370	22680637	5268	1	NC_000014.9	scaffold_364	100.0		True
CONTIG	scaffold_364	5268	correct
74608073	74608728	1	656	NC_000014.9	scaffold_365	100.0		True
CONTIG	scaffold_365	656	correct
45598897	45604718	1	5829	NC_000014.9	scaffold_366	99.83		True
CONTIG	scaffold_366	5829	correct
40827645	40829388	1744	1	NC_000014.9	scaffold_367	99.89		True
CONTIG	scaffold_367	1744	correct
83712141	83713898	1758	1	NC_000014.9	scaffold_368	99.94		True
CONTIG	scaffold_368	1758	correct
44314666	44321855	7192	1	NC_000014.9	scaffold_369	99.93		True
CONTIG	scaffold_369	7198	correct
105546023	105547317	1295	1	NC_000014.9	scaffold_370	100.0		True
CONTIG	scaffold_370	1295	correct
106279073	106281163	1	2089	NC_000014.9	scaffold_371	99.71		True
CONTIG	scaffold_371	2089	correct
104539261	104540079	819	1	NC_000014.9	scaffold_372	99.88		True
CONTIG	scaffold_372	819	correct
105161818	105162569	1	752	NC_000014.9	scaffold_373	100.0		True
CONTIG	scaffold_373	752	correct
CONTIG	scaffold_374	448	unaligned
104859818	104861422	1667	1	NC_000014.9	scaffold_375	95.87		True
CONTIG	scaffold_375	1667	correct
72399738	72410067	10330	1	NC_000014.9	scaffold_376	99.99		True
CONTIG	scaffold_376	10330	correct
87673997	87674745	749	1	NC_000014.9	scaffold_377	100.0		True
CONTIG	scaffold_377	749	correct
83817521	83819099	1581	1	NC_000014.9	scaffold_378	99.81		True
CONTIG	scaffold_378	1581	correct
104310829	104312792	1	1964	NC_000014.9	scaffold_379	100.0		True
CONTIG	scaffold_379	1964	correct
44068342	44069802	1461	1	NC_000014.9	scaffold_381	100.0		True
CONTIG	scaffold_381	1461	correct
71139998	71144653	4656	1	NC_000014.9	scaffold_382	99.98		True
CONTIG	scaffold_382	4656	correct
18446738	18447973	1236	1	NC_000014.9	scaffold_383	100.0		True
CONTIG	scaffold_383	1236	correct
60890055	60908632	1	18572	NC_000014.9	scaffold_384	99.63		True
CONTIG	scaffold_384	18572	correct
CONTIG	scaffold_385	270	unaligned
CONTIG	scaffold_386	257	unaligned
CONTIG	scaffold_387	332	unaligned
106628594	106638406	1	9816	NC_000014.9	scaffold_388	99.9		True
CONTIG	scaffold_388	9816	correct
CONTIG	scaffold_389	356	unaligned
CONTIG	scaffold_390	307	unaligned
18269210	18270186	977	1	NC_000014.9	scaffold_391	100.0		True
CONTIG	scaffold_391	977	correct
105640941	105641861	923	1	NC_000014.9	scaffold_392	99.67		True
CONTIG	scaffold_392	923	correct
18302105	18303153	1049	1	NC_000014.9	scaffold_393	100.0		True
CONTIG	scaffold_393	1049	correct
106403590	106404741	1152	1	NC_000014.9	scaffold_394	99.83		True
CONTIG	scaffold_394	1152	correct
18346860	18348495	1636	1	NC_000014.9	scaffold_395	100.0		True
CONTIG	scaffold_395	1636	correct
75302661	75304088	1428	1	NC_000014.9	scaffold_396	99.93		True
CONTIG	scaffold_396	1428	correct
83063142	83064538	1397	1	NC_000014.9	scaffold_397	100.0		True
CONTIG	scaffold_397	1397	correct
39145938	39147651	1711	1	NC_000014.9	scaffold_398	99.77		True
CONTIG	scaffold_398	1711	correct
71124341	71126051	1696	1	NC_000014.9	scaffold_399	99.01		True
CONTIG	scaffold_399	1696	correct
20733511	20735666	2156	1	NC_000014.9	scaffold_400	100.0		True
CONTIG	scaffold_400	2156	correct
21925366	21927180	1815	1	NC_000014.9	scaffold_401	100.0		True
CONTIG	scaffold_401	1815	correct
49518771	49519837	1067	1	NC_000014.9	scaffold_402	100.0		True
local misassembly
49519697	49521048	2447	1071	NC_000014.9	scaffold_402	98.11		True
CONTIG	scaffold_402	2447	correct
76742002	76744169	2168	1	NC_000014.9	scaffold_403	99.86		True
fake: scaffold gap size wrong estimation (local)
76735242	76741073	8880	3049	NC_000014.9	scaffold_403	99.76		True
CONTIG	scaffold_403	8880	correct
94889156	94890705	1562	1	NC_000014.9	scaffold_404	98.97		True
CONTIG	scaffold_404	1562	correct
88228357	88229303	947	1	NC_000014.9	scaffold_405	100.0		True
CONTIG	scaffold_405	947	correct
28111749	28115223	3475	1	NC_000014.9	scaffold_406	99.94		True
CONTIG	scaffold_406	3517	correct
83998217	83998788	580	1	NC_000014.9	scaffold_407	98.62		True
CONTIG	scaffold_407	580	correct
96176373	96177168	798	1	NC_000014.9	scaffold_408	99.75		True
CONTIG	scaffold_408	798	correct
75597195	75599219	2023	1	NC_000014.9	scaffold_409	99.9		True
CONTIG	scaffold_409	2023	correct
71134363	71139950	1	5586	NC_000014.9	scaffold_410	99.95		True
CONTIG	scaffold_410	5586	correct
38360850	38362383	1539	6	NC_000014.9	scaffold_411	99.87		True
CONTIG	scaffold_411	1539	correct
90485493	90490520	1	5028	NC_000014.9	scaffold_412	99.94		True
CONTIG	scaffold_412	5028	correct
23420144	23424856	4724	1	NC_000014.9	scaffold_413	99.72		True
CONTIG	scaffold_413	4724	correct
87672777	87673953	1	1171	NC_000014.9	scaffold_414	99.4		True
CONTIG	scaffold_414	1171	correct
36338977	36348513	1	9535	NC_000014.9	scaffold_415	99.85		True
CONTIG	scaffold_415	9535	correct
22787966	22789676	1708	1	NC_000014.9	scaffold_416	99.59		True
CONTIG	scaffold_416	1739	correct
93213413	93223954	10543	1	NC_000014.9	scaffold_417	99.95		True
CONTIG	scaffold_417	10543	correct
